Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
23:59:03 (3267233): wrapper (7.7.26015): starting
23:59:03 (3267233): wrapper: running run_atlas (--nthreads 10)
[2025-12-09 23:59:03] Arguments: --nthreads 10
[2025-12-09 23:59:03] Threads: 10
[2025-12-09 23:59:03] Checking for CVMFS
[2025-12-09 23:59:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-09 23:59:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-09 23:59:04] Running cvmfs_config stat atlas.cern.ch
[2025-12-09 23:59:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-09 23:59:04] 2.13.3.0 11319 5335 70828 153833 2 78 3741961 4096000 12780 130560 0 787430024 99.999 547472 503 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-12-09 23:59:04] CVMFS is ok
[2025-12-09 23:59:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-09 23:59:04] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-09 23:59:04] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-09 23:59:04] Further information can be found at the LHC@home message board.
[2025-12-09 23:59:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-09 23:59:04] Checking for apptainer binary...
[2025-12-09 23:59:04] apptainer is not installed, using version from CVMFS
[2025-12-09 23:59:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-09 23:59:04] 7950x-linux
[2025-12-09 23:59:04] apptainer works
[2025-12-09 23:59:04] Set ATHENA_PROC_NUMBER=10
[2025-12-09 23:59:04] Set ATHENA_CORE_NUMBER=10
[2025-12-09 23:59:04] Starting ATLAS job with PandaID=6893851981
[2025-12-09 23:59:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc544/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-10 16:56:09]  *** The last 200 lines of the pilot log: ***
[2025-12-10 16:56:09] 2025-12-11 00:55:30,698 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-10 16:56:09] 2025-12-11 00:55:31,781 | INFO     | job 6893851981 has state=finished
[2025-12-10 16:56:09] 2025-12-11 00:55:31,781 | INFO     | preparing for final server update for job 6893851981 in state='finished'
[2025-12-10 16:56:09] 2025-12-11 00:55:31,781 | INFO     | this job has now completed (state=finished)
[2025-12-10 16:56:09] 2025-12-11 00:55:31,781 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-10 16:56:09] 2025-12-11 00:55:31,781 | INFO     | log transfer has been attempted: DONE
[2025-12-10 16:56:09] 2025-12-11 00:55:31,781 | INFO     | job 6893851981 has finished - writing final server update
[2025-12-10 16:56:09] 2025-12-11 00:55:31,782 | INFO     | total number of processed events: 1000 (read)
[2025-12-10 16:56:09] 2025-12-11 00:55:31,785 | INFO     | executing command: lscpu
[2025-12-10 16:56:09] 2025-12-11 00:55:31,832 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-10 16:56:09] 2025-12-11 00:55:32,068 | INFO     | time since job start (60974s) is within the limit (174528.0s)
[2025-12-10 16:56:09] 2025-12-11 00:55:33,077 | INFO     | monitor loop #4418: job 0:6893851981 is in state 'finished'
[2025-12-10 16:56:09] 2025-12-11 00:55:33,077 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-10 16:56:09] 2025-12-11 00:55:34,073 | INFO     | time since job start (60976s) is within the limit (174528.0s)
[2025-12-10 16:56:09] 2025-12-11 00:55:35,580 | INFO     | monitor loop #4419: job 0:6893851981 is in state 'finished'
[2025-12-10 16:56:09] 2025-12-11 00:55:35,580 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-10 16:56:09] 2025-12-11 00:55:36,079 | INFO     | time since job start (60978s) is within the limit (174528.0s)
[2025-12-10 16:56:09] 2025-12-11 00:55:36,079 | INFO     | 60982s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-10 16:56:09] 2025-12-11 00:55:37,353 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-10 16:56:09] 2025-12-11 00:55:37,356 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4000.00196875
[2025-12-10 16:56:09] 2025-12-11 00:55:37,360 | INFO     | using path: /var/lib/multiboinc/boinc544/slots/1/PanDA_Pilot-6893851981/memory_monitor_summary.json (trf name=prmon)
[2025-12-10 16:56:09] 2025-12-11 00:55:37,360 | INFO     | extracted standard info from prmon json
[2025-12-10 16:56:09] 2025-12-11 00:55:37,360 | INFO     | extracted standard memory fields from prmon json
[2025-12-10 16:56:09] 2025-12-11 00:55:37,360 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-10 16:56:09] 2025-12-11 00:55:37,372 | INFO     | fitting pss+swap vs Time
[2025-12-10 16:56:09] 2025-12-11 00:55:37,373 | INFO     | sum of square deviations: 309153737539.99603
[2025-12-10 16:56:09] 2025-12-11 00:55:37,395 | INFO     | sum of deviations: 27409530194684.527
[2025-12-10 16:56:09] 2025-12-11 00:55:37,395 | INFO     | mean x: 1765384026.002002
[2025-12-10 16:56:09] 2025-12-11 00:55:37,395 | INFO     | mean y: 4135926.745745746
[2025-12-10 16:56:09] 2025-12-11 00:55:37,396 | INFO     | intersect: -156514582400.75134
[2025-12-10 16:56:09] 2025-12-11 00:55:37,396 | INFO     | chi2: 168.46803458370263
[2025-12-10 16:56:09] 2025-12-11 00:55:37,397 | INFO     | sum of square deviations: 304534981782.4958
[2025-12-10 16:56:09] 2025-12-11 00:55:37,407 | INFO     | sum of deviations: 27523680151225.69
[2025-12-10 16:56:09] 2025-12-11 00:55:37,408 | INFO     | mean x: 1765383873.502012
[2025-12-10 16:56:09] 2025-12-11 00:55:37,408 | INFO     | mean y: 4139663.906438632
[2025-12-10 16:56:09] 2025-12-11 00:55:37,408 | INFO     | intersect: -159550144687.91553
[2025-12-10 16:56:09] 2025-12-11 00:55:37,408 | INFO     | chi2: 170.60798138465404
[2025-12-10 16:56:09] 2025-12-11 00:55:37,408 | INFO     | current chi2=170.60798138465404 (change=-1.2702390730914492 %)
[2025-12-10 16:56:09] 2025-12-11 00:55:37,408 | INFO     | right removable region: 993
[2025-12-10 16:56:09] 2025-12-11 00:55:37,409 | INFO     | sum of square deviations: 304534980562.4958
[2025-12-10 16:56:09] 2025-12-11 00:55:37,423 | INFO     | sum of deviations: 27004638259108.26
[2025-12-10 16:56:09] 2025-12-11 00:55:37,423 | INFO     | mean x: 1765384178.502012
[2025-12-10 16:56:09] 2025-12-11 00:55:37,423 | INFO     | mean y: 4149281.6247484908
[2025-12-10 16:56:09] 2025-12-11 00:55:37,423 | INFO     | intersect: -156541286125.315
[2025-12-10 16:56:09] 2025-12-11 00:55:37,423 | INFO     | chi2: 166.24751480165207
[2025-12-10 16:56:09] 2025-12-11 00:55:37,423 | INFO     | current chi2=166.24751480165207 (change=1.3180659390593787 %)
[2025-12-10 16:56:09] 2025-12-11 00:55:37,423 | INFO     | left removable region: 10
[2025-12-10 16:56:09] 2025-12-11 00:55:37,424 | INFO     | sum of square deviations: 294536130883.9962
[2025-12-10 16:56:09] 2025-12-11 00:55:37,434 | INFO     | sum of deviations: 26762645036789.84
[2025-12-10 16:56:09] 2025-12-11 00:55:37,435 | INFO     | mean x: 1765384148.0020347
[2025-12-10 16:56:09] 2025-12-11 00:55:37,435 | INFO     | mean y: 4156135.571719227
[2025-12-10 16:56:09] 2025-12-11 00:55:37,435 | INFO     | intersect: -160405193864.21558
[2025-12-10 16:56:09] 2025-12-11 00:55:37,435 | INFO     | chi2: 168.21156314585141
[2025-12-10 16:56:09] 2025-12-11 00:55:37,435 | INFO     | current memory leak: 90.86 B/s (using 983 data points, chi2=168.21)
[2025-12-10 16:56:09] 2025-12-11 00:55:37,436 | INFO     | could have reported an average CPU frequency of 3999 MHz (37 samples)
[2025-12-10 16:56:09] 2025-12-11 00:55:37,436 | INFO     | ..............................
[2025-12-10 16:56:09] 2025-12-11 00:55:37,436 | INFO     | . Timing measurements:
[2025-12-10 16:56:09] 2025-12-11 00:55:37,436 | INFO     | . get job = 0 s
[2025-12-10 16:56:09] 2025-12-11 00:55:37,436 | INFO     | . initial setup = 4 s
[2025-12-10 16:56:09] 2025-12-11 00:55:37,436 | INFO     | . payload setup = 6 s
[2025-12-10 16:56:09] 2025-12-11 00:55:37,436 | INFO     | . stage-in = 0 s
[2025-12-10 16:56:09] 2025-12-11 00:55:37,436 | INFO     | . payload execution = 60941 s
[2025-12-10 16:56:09] 2025-12-11 00:55:37,436 | INFO     | . stage-out = 3 s
[2025-12-10 16:56:09] 2025-12-11 00:55:37,436 | INFO     | . log creation = 0 s
[2025-12-10 16:56:09] 2025-12-11 00:55:37,436 | INFO     | ..............................
[2025-12-10 16:56:09] 2025-12-11 00:55:37,498 | INFO     | 
[2025-12-10 16:56:09] 2025-12-11 00:55:37,498 | INFO     | job summary report
[2025-12-10 16:56:09] 2025-12-11 00:55:37,498 | INFO     | --------------------------------------------------
[2025-12-10 16:56:09] 2025-12-11 00:55:37,498 | INFO     | PanDA job id: 6893851981
[2025-12-10 16:56:09] 2025-12-11 00:55:37,498 | INFO     | task id: 47523449
[2025-12-10 16:56:09] 2025-12-11 00:55:37,498 | INFO     | errors: (none)
[2025-12-10 16:56:09] 2025-12-11 00:55:37,498 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-10 16:56:09] 2025-12-11 00:55:37,498 | INFO     | pilot state: finished 
[2025-12-10 16:56:09] 2025-12-11 00:55:37,498 | INFO     | transexitcode: 0
[2025-12-10 16:56:09] 2025-12-11 00:55:37,498 | INFO     | exeerrorcode: 0
[2025-12-10 16:56:09] 2025-12-11 00:55:37,499 | INFO     | exeerrordiag: 
[2025-12-10 16:56:09] 2025-12-11 00:55:37,499 | INFO     | exitcode: 0
[2025-12-10 16:56:09] 2025-12-11 00:55:37,499 | INFO     | exitmsg: OK
[2025-12-10 16:56:09] 2025-12-11 00:55:37,499 | INFO     | cpuconsumptiontime: 136451 s
[2025-12-10 16:56:09] 2025-12-11 00:55:37,499 | INFO     | nevents: 1000
[2025-12-10 16:56:09] 2025-12-11 00:55:37,499 | INFO     | neventsw: 0
[2025-12-10 16:56:09] 2025-12-11 00:55:37,499 | INFO     | pid: 3279863
[2025-12-10 16:56:09] 2025-12-11 00:55:37,499 | INFO     | pgrp: 3279863
[2025-12-10 16:56:09] 2025-12-11 00:55:37,499 | INFO     | corecount: 10
[2025-12-10 16:56:09] 2025-12-11 00:55:37,499 | INFO     | event service: False
[2025-12-10 16:56:09] 2025-12-11 00:55:37,499 | INFO     | sizes: {0: 2284482, 5: 2284744, 11: 2284800, 60951: 2337620, 60955: 2346642, 60956: 2346698, 60963: 2347072}
[2025-12-10 16:56:09] 2025-12-11 00:55:37,499 | INFO     | --------------------------------------------------
[2025-12-10 16:56:09] 2025-12-11 00:55:37,499 | INFO     | 
[2025-12-10 16:56:09] 2025-12-11 00:55:37,499 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc544/slots/1
[2025-12-10 16:56:09] 2025-12-11 00:55:37,531 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-10 16:56:09] 2025-12-11 00:55:37,531 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-10 16:56:09] 2025-12-11 00:55:37,531 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-10 16:56:09] 2025-12-11 00:55:37,531 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-10 16:56:09] 2025-12-11 00:55:37,531 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-10 16:56:09] 2025-12-11 00:55:37,531 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-10 16:56:09] 2025-12-11 00:55:37,531 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-10 16:56:09] 2025-12-11 00:55:37,531 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-10 16:56:09] 2025-12-11 00:55:37,531 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-10 16:56:09] 2025-12-11 00:55:37,531 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-10 16:56:09] 2025-12-11 00:55:37,531 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-10 16:56:09] 2025-12-11 00:55:37,531 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-10 16:56:09] 2025-12-11 00:55:37,531 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-10 16:56:09] 2025-12-11 00:55:37,531 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-10 16:56:09] 2025-12-11 00:55:37,531 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-10 16:56:09] 2025-12-11 00:55:37,532 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-10 16:56:09] 2025-12-11 00:55:37,532 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-10 16:56:09] 2025-12-11 00:55:37,532 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-10 16:56:09] 2025-12-11 00:55:37,532 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-10 16:56:09] 2025-12-11 00:55:37,532 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-10 16:56:09] 2025-12-11 00:55:37,532 | INFO     | job 6893851981 has completed (purged errors)
[2025-12-10 16:56:09] 2025-12-11 00:55:37,532 | INFO     | overall cleanup function is called
[2025-12-10 16:56:09] 2025-12-11 00:55:38,553 | INFO     | --- collectZombieJob: --- 10, [3279863]
[2025-12-10 16:56:09] 2025-12-11 00:55:38,553 | INFO     | zombie collector waiting for pid 3279863
[2025-12-10 16:56:09] 2025-12-11 00:55:38,553 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-10 16:56:09] 2025-12-11 00:55:38,553 | INFO     | collected zombie processes
[2025-12-10 16:56:09] 2025-12-11 00:55:38,553 | INFO     | will attempt to kill all subprocesses of pid=3279863
[2025-12-10 16:56:09] 2025-12-11 00:55:38,875 | INFO     | process IDs to be killed: [3279863] (in reverse order)
[2025-12-10 16:56:09] 2025-12-11 00:55:39,029 | WARNING  | found no corresponding commands to process id(s)
[2025-12-10 16:56:09] 2025-12-11 00:55:39,029 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-10 16:56:09] 2025-12-11 00:55:39,036 | INFO     | did not find any defunct processes belonging to 3279863
[2025-12-10 16:56:09] 2025-12-11 00:55:39,043 | INFO     | did not find any defunct processes belonging to 3279863
[2025-12-10 16:56:09] 2025-12-11 00:55:39,043 | INFO     | ready for new job
[2025-12-10 16:56:09] 2025-12-11 00:55:39,043 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-10 16:56:09] 2025-12-11 00:55:39,046 | INFO     | ***************************************
[2025-12-10 16:56:09] 2025-12-11 00:55:39,046 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-10 16:56:09] 2025-12-11 00:55:39,046 | INFO     | ***************************************
[2025-12-10 16:56:09] 2025-12-11 00:55:39,046 | INFO     | 
[2025-12-10 16:56:09] 2025-12-11 00:55:39,048 | INFO     | architecture information:
[2025-12-10 16:56:09] 2025-12-11 00:55:39,048 | INFO     | executing command: cat /etc/os-release
[2025-12-10 16:56:09] 2025-12-11 00:55:39,061 | INFO     | cat /etc/os-release:
[2025-12-10 16:56:09] NAME="CentOS Linux"
[2025-12-10 16:56:09] VERSION="7 (Core)"
[2025-12-10 16:56:09] ID="centos"
[2025-12-10 16:56:09] ID_LIKE="rhel fedora"
[2025-12-10 16:56:09] VERSION_ID="7"
[2025-12-10 16:56:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-10 16:56:09] ANSI_COLOR="0;31"
[2025-12-10 16:56:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-10 16:56:09] HOME_URL="https://www.centos.org/"
[2025-12-10 16:56:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-10 16:56:09] 
[2025-12-10 16:56:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-10 16:56:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-10 16:56:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-10 16:56:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-10 16:56:09] 
[2025-12-10 16:56:09] 2025-12-11 00:55:39,061 | INFO     | ***************************************
[2025-12-10 16:56:09] 2025-12-11 00:55:39,564 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc544/slots/1
[2025-12-10 16:56:09] 2025-12-11 00:55:39,579 | INFO     | sufficient remaining disk space (187787378688 B)
[2025-12-10 16:56:09] 2025-12-11 00:55:39,579 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-10 16:56:09] 2025-12-11 00:55:39,579 | INFO     | current server update state: UPDATING_FINAL
[2025-12-10 16:56:09] 2025-12-11 00:55:39,579 | INFO     | update_server=False
[2025-12-10 16:56:09] 2025-12-11 00:55:39,580 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-10 16:56:09] 2025-12-11 00:55:39,580 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-10 16:56:09] 2025-12-11 00:55:39,580 | INFO     | aborting loop
[2025-12-10 16:56:09] 2025-12-11 00:55:39,645 | INFO     | all data control threads have been joined
[2025-12-10 16:56:09] 2025-12-11 00:55:40,051 | INFO     | all payload control threads have been joined
[2025-12-10 16:56:09] 2025-12-11 00:55:40,415 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-10 16:56:09] 2025-12-11 00:55:40,585 | INFO     | [job] retrieve thread has finished
[2025-12-10 16:56:09] 2025-12-11 00:55:40,585 | INFO     | [job] job monitor thread has finished
[2025-12-10 16:56:09] 2025-12-11 00:55:40,650 | INFO     | [data] control thread has finished
[2025-12-10 16:56:09] 2025-12-11 00:55:40,789 | INFO     | [payload] failed_post thread has finished
[2025-12-10 16:56:09] 2025-12-11 00:55:41,056 | INFO     | [payload] control thread has finished
[2025-12-10 16:56:09] 2025-12-11 00:55:41,077 | INFO     | [data] copytool_in thread has finished
[2025-12-10 16:56:09] 2025-12-11 00:55:41,124 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-10 16:56:09] 2025-12-11 00:55:41,146 | INFO     | all job control threads have been joined
[2025-12-10 16:56:09] 2025-12-11 00:55:41,217 | INFO     | [job] validate thread has finished
[2025-12-10 16:56:09] 2025-12-11 00:55:41,271 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-10 16:56:09] 2025-12-11 00:55:41,430 | INFO     | [payload] validate_post thread has finished
[2025-12-10 16:56:09] 2025-12-11 00:55:41,875 | INFO     | [payload] execute_payloads thread has finished
[2025-12-10 16:56:09] 2025-12-11 00:55:41,929 | INFO     | [payload] validate_pre thread has finished
[2025-12-10 16:56:09] 2025-12-11 00:55:41,985 | INFO     | [job] create_data_payload thread has finished
[2025-12-10 16:56:09] 2025-12-11 00:55:42,151 | INFO     | [job] control thread has finished
[2025-12-10 16:56:09] 2025-12-11 00:55:42,420 | INFO     | [data] copytool_out thread has finished
[2025-12-10 16:56:09] 2025-12-11 00:55:42,507 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-10 16:56:09] 2025-12-11 00:55:43,512 | INFO     | [job] queue monitor thread has finished
[2025-12-10 16:56:09] 2025-12-11 00:55:45,281 | INFO     | [data] queue_monitor thread has finished
[2025-12-10 16:56:09] 2025-12-11 00:55:59,135 | INFO     | [monitor] cgroup control has ended
[2025-12-10 16:56:09] 2025-12-11 00:56:01,112 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126335636436800)>', '<ExcThread(monitor, started 126335280195328)>']
[2025-12-10 16:56:09] 2025-12-11 00:56:06,137 | INFO     | all workflow threads have been joined
[2025-12-10 16:56:09] 2025-12-11 00:56:06,137 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-10 16:56:09] 2025-12-11 00:56:06,141 | INFO     | traces error code: 0
[2025-12-10 16:56:09] 2025-12-11 00:56:06,141 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-10 16:56:09] 2025-12-11 00:56:09,500 | INFO     | PID=3271078 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-10 16:56:09] 2025-12-11 00:56:09,500 | INFO     | .. there are 15 such processes running
[2025-12-10 16:56:09] 2025-12-11 00:56:09,500 | INFO     | found 0 job(s) in 20 queues
[2025-12-10 16:56:09] 2025-12-11 00:56:09,500 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-10 16:56:09] 2025-12-11 00:56:09,500 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-10 16:56:09] 2025-12-11 00:56:09,500 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-10 16:56:09] 2025-12-11 00:56:09,500 | INFO     | [monitor] control thread has ended
[2025-12-10 16:56:09] 2025-12-11 00:56:09,626 [wrapper] ==== pilot stdout END ====
[2025-12-10 16:56:09] 2025-12-11 00:56:09,628 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-10 16:56:09] 2025-12-11 00:56:09,630 [wrapper] pilotpid: 3271078
[2025-12-10 16:56:09] 2025-12-11 00:56:09,631 [wrapper] Pilot exit status: 0
[2025-12-10 16:56:09] 2025-12-11 00:56:09,662 [wrapper] pandaids: 6893851981
[2025-12-10 16:56:09] 2025-12-11 00:56:09,735 [wrapper] cleanup supervisor_pilot  643368 3271079
[2025-12-10 16:56:09] 2025-12-11 00:56:09,739 [wrapper] Test setup, not cleaning
[2025-12-10 16:56:09] 2025-12-11 00:56:09,751 [wrapper] apfmon messages muted
[2025-12-10 16:56:09] 2025-12-11 00:56:09,753 [wrapper] ==== wrapper stdout END ====
[2025-12-10 16:56:09] 2025-12-11 00:56:09,757 [wrapper] ==== wrapper stderr END ====
[2025-12-10 16:56:09]  *** Error codes and diagnostics ***
[2025-12-10 16:56:09]     "exeErrorCode": 0,
[2025-12-10 16:56:09]     "exeErrorDiag": "",
[2025-12-10 16:56:09]     "pilotErrorCode": 0,
[2025-12-10 16:56:09]     "pilotErrorDiag": "",
[2025-12-10 16:56:09]  *** Listing of results directory ***
[2025-12-10 16:56:09] total 1334036
[2025-12-10 16:56:09] -rw-r--r-- 1 root root    579449 Dec  7 12:12 pilot3.tar.gz
[2025-12-10 16:56:09] -rw-r--r-- 1 root root      5112 Dec  7 12:33 queuedata.json
[2025-12-10 16:56:09] -rwx------ 1 4871 1028     36292 Dec  7 12:35 runpilot2-wrapper.sh
[2025-12-10 16:56:09] -rw-r--r-- 1 root root       100 Dec  9 23:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-10 16:56:09] -rwxr-xr-x 1 root root      7986 Dec  9 23:59 run_atlas
[2025-12-10 16:56:09] -rw-r--r-- 1 root root       105 Dec  9 23:59 job.xml
[2025-12-10 16:56:09] -rw-r--r-- 2 root root 411774727 Dec  9 23:59 EVNT.47493127._000363.pool.root.1
[2025-12-10 16:56:09] drwxrwx--x 2 root root      4096 Dec  9 23:59 shared
[2025-12-10 16:56:09] -rw-r--r-- 2 root root    592574 Dec  9 23:59 input.tar.gz
[2025-12-10 16:56:09] -rw-r--r-- 2 root root     15847 Dec  9 23:59 start_atlas.sh
[2025-12-10 16:56:09] -rw-r--r-- 1 root root         0 Dec  9 23:59 boinc_lockfile
[2025-12-10 16:56:09] -rw-r--r-- 1 root root      2786 Dec  9 23:59 pandaJob.out
[2025-12-10 16:56:09] -rw------- 1 root root    979780 Dec  9 23:59 agis_schedconf.cvmfs.json
[2025-12-10 16:56:09] drwxr-xr-x 5  320  320      4096 Dec  9 23:59 pilot3
[2025-12-10 16:56:09] -rw-r--r-- 1 root root      7079 Dec 10 10:10 init_data.xml
[2025-12-10 16:56:09] -rw-r--r-- 1 root root       533 Dec 10 16:47 boinc_task_state.xml
[2025-12-10 16:56:09] -rw------- 1 root root 928335111 Dec 10 16:55 HITS.47523449._003626.pool.root.1
[2025-12-10 16:56:09] -rw------- 1 root root      1065 Dec 10 16:55 memory_monitor_summary.json
[2025-12-10 16:56:09] -rw------- 1 root root   1516240 Dec 10 16:55 agis_ddmendpoints.agis.ALL.json
[2025-12-10 16:56:09] -rw------- 1 root root   2365460 Dec 10 16:55 log.47523449._003626.job.log.tgz.1
[2025-12-10 16:56:09] -rw------- 1 root root        95 Dec 10 16:55 pilot_heartbeat.json
[2025-12-10 16:56:09] -rw------- 1 root root      8639 Dec 10 16:55 heartbeat.json
[2025-12-10 16:56:09] -rw-r--r-- 1 root root      8192 Dec 10 16:56 boinc_mmap_file
[2025-12-10 16:56:09] -rw-r--r-- 1 root root        29 Dec 10 16:56 wrapper_checkpoint.txt
[2025-12-10 16:56:09] -rw------- 1 root root       823 Dec 10 16:56 pilotlog.txt
[2025-12-10 16:56:09] -rw------- 1 root root   8653226 Dec 10 16:56 log.47523449._003626.job.log.1
[2025-12-10 16:56:09] -rw------- 1 root root       353 Dec 10 16:56 output.list
[2025-12-10 16:56:09] -rw-r--r-- 1 root root       620 Dec 10 16:56 runtime_log
[2025-12-10 16:56:09] -rw------- 1 root root  11038720 Dec 10 16:56 result.tar.gz
[2025-12-10 16:56:09] -rw-r--r-- 1 root root      9021 Dec 10 16:56 runtime_log.err
[2025-12-10 16:56:09] -rw------- 1 root root       664 Dec 10 16:56 5SJNDmSeam8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmwnMKDm0YF6Rn.diag
[2025-12-10 16:56:09] -rw-r--r-- 1 root root     21776 Dec 10 16:56 stderr.txt
[2025-12-10 16:56:09] HITS file was successfully produced:
[2025-12-10 16:56:09] -rw------- 1 root root 928335111 Dec 10 16:55 shared/HITS.pool.root.1
[2025-12-10 16:56:09]  *** Contents of shared directory: ***
[2025-12-10 16:56:09] total 1320088
[2025-12-10 16:56:09] -rw-r--r-- 2 root root 411774727 Dec  9 23:59 ATLAS.root_0
[2025-12-10 16:56:09] -rw-r--r-- 2 root root    592574 Dec  9 23:59 input.tar.gz
[2025-12-10 16:56:09] -rw-r--r-- 2 root root     15847 Dec  9 23:59 start_atlas.sh
[2025-12-10 16:56:09] -rw------- 1 root root 928335111 Dec 10 16:55 HITS.pool.root.1
[2025-12-10 16:56:09] -rw------- 1 root root  11038720 Dec 10 16:56 result.tar.gz
16:56:11 (3267233): run_atlas exited; CPU time 136553.990115
16:56:11 (3267233): called boinc_finish(0)

</stderr_txt>
]]>

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