Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:19:58 (32562): wrapper (7.7.26015): starting
15:19:58 (32562): wrapper: running run_atlas (--nthreads 8)
[2025-12-07 15:19:58] Arguments: --nthreads 8
[2025-12-07 15:19:58] Threads: 8
[2025-12-07 15:19:58] Checking for CVMFS
[2025-12-07 15:19:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-07 15:19:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-07 15:19:59] Running cvmfs_config stat atlas.cern.ch
[2025-12-07 15:19:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-07 15:19:59] 2.11.2.0 2797 82026 91700 153740 3 1 12997731 20275200 1 130560 0 21444692 99.850 4734800 31463 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-07 15:19:59] CVMFS is ok
[2025-12-07 15:19:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-07 15:19:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-07 15:19:59] Further information can be found at the LHC@home message board.
[2025-12-07 15:19:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-07 15:19:59] Checking for apptainer binary...
[2025-12-07 15:19:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-07 15:19:59] Running /usr/bin/apptainer --version
[2025-12-07 15:19:59] apptainer version 1.3.2-1.el7
[2025-12-07 15:19:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-07 15:20:01] c-204-11.aglt2.org
[2025-12-07 15:20:01] apptainer works
[2025-12-07 15:20:01] Set ATHENA_PROC_NUMBER=8
[2025-12-07 15:20:01] Set ATHENA_CORE_NUMBER=8
[2025-12-07 15:20:01] Starting ATLAS job with PandaID=6893852736
[2025-12-07 15:20:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-08 03:46:55]  *** The last 200 lines of the pilot log: ***
[2025-12-08 03:46:55] 2025-12-08 08:46:18,175 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-08 03:46:55] 2025-12-08 08:46:19,432 | INFO     | time since job start (44760s) is within the limit (174528.0s)
[2025-12-08 03:46:55] 2025-12-08 08:46:20,684 | INFO     | monitor loop #3296: job 0:6893852736 is in state 'finished'
[2025-12-08 03:46:55] 2025-12-08 08:46:20,684 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-08 03:46:55] 2025-12-08 08:46:21,438 | INFO     | time since job start (44762s) is within the limit (174528.0s)
[2025-12-08 03:46:55] 2025-12-08 08:46:22,030 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-08 03:46:55] 2025-12-08 08:46:22,033 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-12-08 03:46:55] 2025-12-08 08:46:22,035 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893852736/memory_monitor_summary.json (trf name=prmon)
[2025-12-08 03:46:55] 2025-12-08 08:46:22,035 | INFO     | extracted standard info from prmon json
[2025-12-08 03:46:55] 2025-12-08 08:46:22,035 | INFO     | extracted standard memory fields from prmon json
[2025-12-08 03:46:55] 2025-12-08 08:46:22,036 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-08 03:46:55] 2025-12-08 08:46:22,047 | INFO     | fitting pss+swap vs Time
[2025-12-08 03:46:55] 2025-12-08 08:46:22,048 | INFO     | sum of square deviations: 122120858506.83212
[2025-12-08 03:46:55] 2025-12-08 08:46:22,060 | INFO     | sum of deviations: 796642049102.5127
[2025-12-08 03:46:55] 2025-12-08 08:46:22,060 | INFO     | mean x: 1765161178.5238745
[2025-12-08 03:46:55] 2025-12-08 08:46:22,060 | INFO     | mean y: 2866587.2564802184
[2025-12-08 03:46:55] 2025-12-08 08:46:22,060 | INFO     | intersect: -11511969088.22966
[2025-12-08 03:46:55] 2025-12-08 08:46:22,061 | INFO     | chi2: 5.314846857915861
[2025-12-08 03:46:55] 2025-12-08 08:46:22,062 | INFO     | sum of square deviations: 119638919785.45032
[2025-12-08 03:46:55] 2025-12-08 08:46:22,073 | INFO     | sum of deviations: 1021735048586.4236
[2025-12-08 03:46:55] 2025-12-08 08:46:22,073 | INFO     | mean x: 1765161026.0274725
[2025-12-08 03:46:55] 2025-12-08 08:46:22,073 | INFO     | mean y: 2880410.528846154
[2025-12-08 03:46:55] 2025-12-08 08:46:22,074 | INFO     | intersect: -15071870263.627388
[2025-12-08 03:46:55] 2025-12-08 08:46:22,074 | INFO     | chi2: 2.4273921487121584
[2025-12-08 03:46:55] 2025-12-08 08:46:22,074 | INFO     | current chi2=2.4273921487121584 (change=54.32808858646918 %)
[2025-12-08 03:46:55] 2025-12-08 08:46:22,075 | INFO     | sum of square deviations: 117190842164.05011
[2025-12-08 03:46:55] 2025-12-08 08:46:22,086 | INFO     | sum of deviations: 1066300130725.3104
[2025-12-08 03:46:55] 2025-12-08 08:46:22,086 | INFO     | mean x: 1765160873.5311203
[2025-12-08 03:46:55] 2025-12-08 08:46:22,086 | INFO     | mean y: 2883178.3195020747
[2025-12-08 03:46:55] 2025-12-08 08:46:22,087 | INFO     | intersect: -16058024273.498646
[2025-12-08 03:46:55] 2025-12-08 08:46:22,087 | INFO     | chi2: 2.1898387868437363
[2025-12-08 03:46:55] 2025-12-08 08:46:22,088 | INFO     | current chi2=2.1898387868437363 (change=9.78636113635182 %)
[2025-12-08 03:46:55] 2025-12-08 08:46:22,088 | INFO     | right removable region: 722
[2025-12-08 03:46:55] 2025-12-08 08:46:22,088 | INFO     | sum of square deviations: 119638685545.45027
[2025-12-08 03:46:55] 2025-12-08 08:46:22,099 | INFO     | sum of deviations: 605129043604.0842
[2025-12-08 03:46:55] 2025-12-08 08:46:22,099 | INFO     | mean x: 1765161331.0274725
[2025-12-08 03:46:55] 2025-12-08 08:46:22,100 | INFO     | mean y: 2878333.9958791207
[2025-12-08 03:46:55] 2025-12-08 08:46:22,100 | INFO     | intersect: -8925257102.980154
[2025-12-08 03:46:55] 2025-12-08 08:46:22,101 | INFO     | chi2: 3.264452151083054
[2025-12-08 03:46:55] 2025-12-08 08:46:22,101 | INFO     | current chi2=3.264452151083054 (change=38.578622520025704 %)
[2025-12-08 03:46:55] 2025-12-08 08:46:22,101 | INFO     | sum of square deviations: 117190462378.16878
[2025-12-08 03:46:55] 2025-12-08 08:46:22,112 | INFO     | sum of deviations: 561560869724.1627
[2025-12-08 03:46:55] 2025-12-08 08:46:22,112 | INFO     | mean x: 1765161483.5283542
[2025-12-08 03:46:55] 2025-12-08 08:46:22,113 | INFO     | mean y: 2881046.6749654217
[2025-12-08 03:46:55] 2025-12-08 08:46:22,113 | INFO     | intersect: -8455534406.069535
[2025-12-08 03:46:55] 2025-12-08 08:46:22,113 | INFO     | chi2: 3.2190782329246748
[2025-12-08 03:46:55] 2025-12-08 08:46:22,114 | INFO     | current chi2=3.2190782329246748 (change=1.3899397527798167 %)
[2025-12-08 03:46:55] 2025-12-08 08:46:22,114 | INFO     | left removable region: 20
[2025-12-08 03:46:55] 2025-12-08 08:46:22,115 | INFO     | sum of square deviations: 107272756602.10947
[2025-12-08 03:46:55] 2025-12-08 08:46:22,125 | INFO     | sum of deviations: 776643088152.0918
[2025-12-08 03:46:55] 2025-12-08 08:46:22,125 | INFO     | mean x: 1765161453.0356126
[2025-12-08 03:46:55] 2025-12-08 08:46:22,125 | INFO     | mean y: 2901276.2763532763
[2025-12-08 03:46:55] 2025-12-08 08:46:22,125 | INFO     | intersect: -12776675620.936089
[2025-12-08 03:46:55] 2025-12-08 08:46:22,126 | INFO     | chi2: 0.063822112619724
[2025-12-08 03:46:55] 2025-12-08 08:46:22,126 | INFO     | current memory leak: 7.24 B/s (using 702 data points, chi2=0.06)
[2025-12-08 03:46:55] 2025-12-08 08:46:22,127 | INFO     | could have reported an average CPU frequency of 2153 MHz (28 samples)
[2025-12-08 03:46:55] 2025-12-08 08:46:22,127 | INFO     | ..............................
[2025-12-08 03:46:55] 2025-12-08 08:46:22,127 | INFO     | . Timing measurements:
[2025-12-08 03:46:55] 2025-12-08 08:46:22,127 | INFO     | . get job = 0 s
[2025-12-08 03:46:55] 2025-12-08 08:46:22,127 | INFO     | . initial setup = 2 s
[2025-12-08 03:46:55] 2025-12-08 08:46:22,127 | INFO     | . payload setup = 9 s
[2025-12-08 03:46:55] 2025-12-08 08:46:22,127 | INFO     | . stage-in = 0 s
[2025-12-08 03:46:55] 2025-12-08 08:46:22,128 | INFO     | . payload execution = 44717 s
[2025-12-08 03:46:55] 2025-12-08 08:46:22,128 | INFO     | . stage-out = 3 s
[2025-12-08 03:46:55] 2025-12-08 08:46:22,128 | INFO     | . log creation = 0 s
[2025-12-08 03:46:55] 2025-12-08 08:46:22,128 | INFO     | ..............................
[2025-12-08 03:46:55] 2025-12-08 08:46:22,219 | INFO     | 
[2025-12-08 03:46:55] 2025-12-08 08:46:22,220 | INFO     | job summary report
[2025-12-08 03:46:55] 2025-12-08 08:46:22,220 | INFO     | --------------------------------------------------
[2025-12-08 03:46:55] 2025-12-08 08:46:22,220 | INFO     | PanDA job id: 6893852736
[2025-12-08 03:46:55] 2025-12-08 08:46:22,220 | INFO     | task id: 47523449
[2025-12-08 03:46:55] 2025-12-08 08:46:22,220 | INFO     | errors: (none)
[2025-12-08 03:46:55] 2025-12-08 08:46:22,220 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-08 03:46:55] 2025-12-08 08:46:22,221 | INFO     | pilot state: finished 
[2025-12-08 03:46:55] 2025-12-08 08:46:22,221 | INFO     | transexitcode: 0
[2025-12-08 03:46:55] 2025-12-08 08:46:22,221 | INFO     | exeerrorcode: 0
[2025-12-08 03:46:55] 2025-12-08 08:46:22,221 | INFO     | exeerrordiag: 
[2025-12-08 03:46:55] 2025-12-08 08:46:22,221 | INFO     | exitcode: 0
[2025-12-08 03:46:55] 2025-12-08 08:46:22,222 | INFO     | exitmsg: OK
[2025-12-08 03:46:55] 2025-12-08 08:46:22,222 | INFO     | cpuconsumptiontime: 347115 s
[2025-12-08 03:46:55] 2025-12-08 08:46:22,222 | INFO     | nevents: 1000
[2025-12-08 03:46:55] 2025-12-08 08:46:22,222 | INFO     | neventsw: 0
[2025-12-08 03:46:55] 2025-12-08 08:46:22,222 | INFO     | pid: 12018
[2025-12-08 03:46:55] 2025-12-08 08:46:22,222 | INFO     | pgrp: 12018
[2025-12-08 03:46:55] 2025-12-08 08:46:22,222 | INFO     | corecount: 8
[2025-12-08 03:46:55] 2025-12-08 08:46:22,222 | INFO     | event service: False
[2025-12-08 03:46:55] 2025-12-08 08:46:22,223 | INFO     | sizes: {0: 2284468, 1: 2284468, 6: 2284758, 11: 2284786, 44730: 2330656, 44735: 2339650, 44737: 2339834, 44745: 2340080}
[2025-12-08 03:46:55] 2025-12-08 08:46:22,223 | INFO     | --------------------------------------------------
[2025-12-08 03:46:55] 2025-12-08 08:46:22,223 | INFO     | 
[2025-12-08 03:46:55] 2025-12-08 08:46:22,223 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-08 03:46:55] 2025-12-08 08:46:22,249 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-08 03:46:55] 2025-12-08 08:46:22,249 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-08 03:46:55] 2025-12-08 08:46:22,249 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-08 03:46:55] 2025-12-08 08:46:22,250 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-08 03:46:55] 2025-12-08 08:46:22,250 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-08 03:46:55] 2025-12-08 08:46:22,250 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-08 03:46:55] 2025-12-08 08:46:22,250 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-08 03:46:55] 2025-12-08 08:46:22,250 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-08 03:46:55] 2025-12-08 08:46:22,250 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-08 03:46:55] 2025-12-08 08:46:22,251 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-08 03:46:55] 2025-12-08 08:46:22,251 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-08 03:46:55] 2025-12-08 08:46:22,251 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-08 03:46:55] 2025-12-08 08:46:22,251 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-08 03:46:55] 2025-12-08 08:46:22,251 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-08 03:46:55] 2025-12-08 08:46:22,252 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-08 03:46:55] 2025-12-08 08:46:22,252 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-08 03:46:55] 2025-12-08 08:46:22,252 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-08 03:46:55] 2025-12-08 08:46:22,252 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-08 03:46:55] 2025-12-08 08:46:22,252 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-08 03:46:55] 2025-12-08 08:46:22,252 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-08 03:46:55] 2025-12-08 08:46:22,253 | INFO     | job 6893852736 has completed (purged errors)
[2025-12-08 03:46:55] 2025-12-08 08:46:22,253 | INFO     | overall cleanup function is called
[2025-12-08 03:46:55] 2025-12-08 08:46:23,269 | INFO     | --- collectZombieJob: --- 10, [12018]
[2025-12-08 03:46:55] 2025-12-08 08:46:23,279 | INFO     | zombie collector waiting for pid 12018
[2025-12-08 03:46:55] 2025-12-08 08:46:23,280 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-08 03:46:55] 2025-12-08 08:46:23,280 | INFO     | collected zombie processes
[2025-12-08 03:46:55] 2025-12-08 08:46:23,280 | INFO     | will attempt to kill all subprocesses of pid=12018
[2025-12-08 03:46:55] 2025-12-08 08:46:23,370 | INFO     | process IDs to be killed: [12018] (in reverse order)
[2025-12-08 03:46:55] 2025-12-08 08:46:23,426 | WARNING  | found no corresponding commands to process id(s)
[2025-12-08 03:46:55] 2025-12-08 08:46:23,427 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-08 03:46:55] 2025-12-08 08:46:23,431 | INFO     | did not find any defunct processes belonging to 12018
[2025-12-08 03:46:55] 2025-12-08 08:46:23,435 | INFO     | did not find any defunct processes belonging to 12018
[2025-12-08 03:46:55] 2025-12-08 08:46:23,435 | INFO     | ready for new job
[2025-12-08 03:46:55] 2025-12-08 08:46:23,435 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-08 03:46:55] 2025-12-08 08:46:23,439 | INFO     | ***************************************
[2025-12-08 03:46:55] 2025-12-08 08:46:23,439 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-08 03:46:55] 2025-12-08 08:46:23,439 | INFO     | ***************************************
[2025-12-08 03:46:55] 2025-12-08 08:46:23,439 | INFO     | 
[2025-12-08 03:46:55] 2025-12-08 08:46:23,440 | INFO     | architecture information:
[2025-12-08 03:46:55] 2025-12-08 08:46:23,441 | INFO     | executing command: cat /etc/os-release
[2025-12-08 03:46:55] 2025-12-08 08:46:23,459 | INFO     | cat /etc/os-release:
[2025-12-08 03:46:55] NAME="CentOS Linux"
[2025-12-08 03:46:55] VERSION="7 (Core)"
[2025-12-08 03:46:55] ID="centos"
[2025-12-08 03:46:55] ID_LIKE="rhel fedora"
[2025-12-08 03:46:55] VERSION_ID="7"
[2025-12-08 03:46:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-08 03:46:55] ANSI_COLOR="0;31"
[2025-12-08 03:46:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-08 03:46:55] HOME_URL="https://www.centos.org/"
[2025-12-08 03:46:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-08 03:46:55] 
[2025-12-08 03:46:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-08 03:46:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-08 03:46:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-08 03:46:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-08 03:46:55] 
[2025-12-08 03:46:55] 2025-12-08 08:46:23,460 | INFO     | ***************************************
[2025-12-08 03:46:55] 2025-12-08 08:46:23,963 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-08 03:46:55] 2025-12-08 08:46:23,984 | INFO     | sufficient remaining disk space (17472421888 B)
[2025-12-08 03:46:55] 2025-12-08 08:46:23,984 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-08 03:46:55] 2025-12-08 08:46:23,984 | INFO     | current server update state: UPDATING_FINAL
[2025-12-08 03:46:55] 2025-12-08 08:46:23,985 | INFO     | update_server=False
[2025-12-08 03:46:55] 2025-12-08 08:46:23,985 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-08 03:46:55] 2025-12-08 08:46:23,985 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-08 03:46:55] 2025-12-08 08:46:24,163 | INFO     | all data control threads have been joined
[2025-12-08 03:46:55] 2025-12-08 08:46:24,192 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-08 03:46:55] 2025-12-08 08:46:24,192 | INFO     | aborting loop
[2025-12-08 03:46:55] 2025-12-08 08:46:24,447 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-08 03:46:55] 2025-12-08 08:46:24,882 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-08 03:46:55] 2025-12-08 08:46:24,989 | INFO     | all payload control threads have been joined
[2025-12-08 03:46:55] 2025-12-08 08:46:24,991 | INFO     | [job] retrieve thread has finished
[2025-12-08 03:46:55] 2025-12-08 08:46:24,991 | INFO     | [job] create_data_payload thread has finished
[2025-12-08 03:46:55] 2025-12-08 08:46:24,992 | INFO     | [job] queue monitor thread has finished
[2025-12-08 03:46:55] 2025-12-08 08:46:25,165 | INFO     | [data] control thread has finished
[2025-12-08 03:46:55] 2025-12-08 08:46:25,197 | INFO     | [job] job monitor thread has finished
[2025-12-08 03:46:55] 2025-12-08 08:46:25,585 | INFO     | all job control threads have been joined
[2025-12-08 03:46:55] 2025-12-08 08:46:25,745 | INFO     | [payload] validate_pre thread has finished
[2025-12-08 03:46:55] 2025-12-08 08:46:25,885 | INFO     | [payload] validate_post thread has finished
[2025-12-08 03:46:55] 2025-12-08 08:46:25,905 | INFO     | [job] validate thread has finished
[2025-12-08 03:46:55] 2025-12-08 08:46:25,994 | INFO     | [payload] control thread has finished
[2025-12-08 03:46:55] 2025-12-08 08:46:26,240 | INFO     | [payload] execute_payloads thread has finished
[2025-12-08 03:46:55] 2025-12-08 08:46:26,370 | INFO     | [payload] failed_post thread has finished
[2025-12-08 03:46:55] 2025-12-08 08:46:26,387 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-08 03:46:55] 2025-12-08 08:46:26,476 | INFO     | [data] copytool_in thread has finished
[2025-12-08 03:46:55] 2025-12-08 08:46:26,591 | INFO     | [job] control thread has finished
[2025-12-08 03:46:55] 2025-12-08 08:46:26,888 | INFO     | [data] copytool_out thread has finished
[2025-12-08 03:46:55] 2025-12-08 08:46:28,451 | INFO     | [data] queue_monitor thread has finished
[2025-12-08 03:46:55] 2025-12-08 08:46:33,094 | INFO     | [monitor] cgroup control has ended
[2025-12-08 03:46:55] 2025-12-08 08:46:33,489 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139678894667584)>', '<ExcThread(monitor, started 139678233650944)>']
[2025-12-08 03:46:55] 2025-12-08 08:46:38,526 | INFO     | all workflow threads have been joined
[2025-12-08 03:46:55] 2025-12-08 08:46:38,533 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-08 03:46:55] 2025-12-08 08:46:38,534 | INFO     | traces error code: 0
[2025-12-08 03:46:55] 2025-12-08 08:46:38,535 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-08 03:46:55] 2025-12-08 08:46:54,669 | INFO     | PID=5610 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-08 03:46:55] 2025-12-08 08:46:54,670 | INFO     | found 0 job(s) in 20 queues
[2025-12-08 03:46:55] 2025-12-08 08:46:54,670 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-08 03:46:55] 2025-12-08 08:46:54,670 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-08 03:46:55] 2025-12-08 08:46:54,670 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-08 03:46:55] 2025-12-08 08:46:54,670 | INFO     | [monitor] control thread has ended
[2025-12-08 03:46:55] 2025-12-08 08:46:54,790 [wrapper] ==== pilot stdout END ====
[2025-12-08 03:46:55] 2025-12-08 08:46:54,795 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-08 03:46:55] 2025-12-08 08:46:54,799 [wrapper] pilotpid: 5610
[2025-12-08 03:46:55] 2025-12-08 08:46:54,804 [wrapper] Pilot exit status: 0
[2025-12-08 03:46:55] 2025-12-08 08:46:54,819 [wrapper] pandaids: 6893852736
[2025-12-08 03:46:55] 2025-12-08 08:46:54,867 [wrapper] cleanup supervisor_pilot  3687 5611
[2025-12-08 03:46:55] 2025-12-08 08:46:54,872 [wrapper] Test setup, not cleaning
[2025-12-08 03:46:55] 2025-12-08 08:46:54,877 [wrapper] apfmon messages muted
[2025-12-08 03:46:55] 2025-12-08 08:46:54,881 [wrapper] ==== wrapper stdout END ====
[2025-12-08 03:46:55] 2025-12-08 08:46:54,885 [wrapper] ==== wrapper stderr END ====
[2025-12-08 03:46:55]  *** Error codes and diagnostics ***
[2025-12-08 03:46:55]     "exeErrorCode": 0,
[2025-12-08 03:46:55]     "exeErrorDiag": "",
[2025-12-08 03:46:55]     "pilotErrorCode": 0,
[2025-12-08 03:46:55]     "pilotErrorDiag": "",
[2025-12-08 03:46:55]  *** Listing of results directory ***
[2025-12-08 03:46:55] total 1311208
[2025-12-08 03:46:55] -rw-r--r-- 1 boincer umatlas    579449 Dec  7 15:12 pilot3.tar.gz
[2025-12-08 03:46:55] -rw-r--r-- 1 boincer umatlas      5112 Dec  7 15:16 queuedata.json
[2025-12-08 03:46:55] -rwx------ 1 boincer umatlas     36292 Dec  7 15:19 runpilot2-wrapper.sh
[2025-12-08 03:46:55] -rw-r--r-- 1 boincer umatlas       100 Dec  7 15:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-08 03:46:55] -rwxr-xr-x 1 boincer umatlas      7986 Dec  7 15:19 run_atlas
[2025-12-08 03:46:55] -rw-r--r-- 1 boincer umatlas       105 Dec  7 15:19 job.xml
[2025-12-08 03:46:55] -rw-r--r-- 2 boincer umatlas 409327931 Dec  7 15:19 EVNT.47493127._000399.pool.root.1
[2025-12-08 03:46:55] -rw-r--r-- 2 boincer umatlas     15847 Dec  7 15:19 start_atlas.sh
[2025-12-08 03:46:55] drwxrwx--x 2 boincer umatlas      4096 Dec  7 15:19 shared
[2025-12-08 03:46:55] -rw-r--r-- 2 boincer umatlas    592571 Dec  7 15:19 input.tar.gz
[2025-12-08 03:46:55] -rw-r--r-- 1 boincer umatlas         0 Dec  7 15:19 boinc_lockfile
[2025-12-08 03:46:55] -rw-r--r-- 1 boincer umatlas      2786 Dec  7 15:20 pandaJob.out
[2025-12-08 03:46:55] -rw------- 1 boincer umatlas        57 Dec  7 15:20 setup.sh.local
[2025-12-08 03:46:55] -rw------- 1 boincer umatlas    981509 Dec  7 15:20 agis_schedconf.cvmfs.json
[2025-12-08 03:46:55] drwx------ 5 boincer umatlas      4096 Dec  7 15:20 pilot3
[2025-12-08 03:46:55] -rw-r--r-- 1 boincer umatlas       532 Dec  8 03:35 boinc_task_state.xml
[2025-12-08 03:46:55] -rw------- 1 boincer umatlas 913142246 Dec  8 03:45 HITS.47523449._003988.pool.root.1
[2025-12-08 03:46:55] -rw-r--r-- 1 boincer umatlas      5913 Dec  8 03:45 init_data.xml
[2025-12-08 03:46:55] -rw------- 1 boincer umatlas      1061 Dec  8 03:46 memory_monitor_summary.json
[2025-12-08 03:46:55] -rw------- 1 boincer umatlas   1516240 Dec  8 03:46 agis_ddmendpoints.agis.ALL.json
[2025-12-08 03:46:55] -rw------- 1 boincer umatlas   1980113 Dec  8 03:46 log.47523449._003988.job.log.tgz.1
[2025-12-08 03:46:55] -rw------- 1 boincer umatlas        95 Dec  8 03:46 pilot_heartbeat.json
[2025-12-08 03:46:55] -rw------- 1 boincer umatlas      8654 Dec  8 03:46 heartbeat.json
[2025-12-08 03:46:55] -rw-r--r-- 1 boincer umatlas        29 Dec  8 03:46 wrapper_checkpoint.txt
[2025-12-08 03:46:55] -rw-r--r-- 1 boincer umatlas      8192 Dec  8 03:46 boinc_mmap_file
[2025-12-08 03:46:55] -rw------- 1 boincer umatlas       744 Dec  8 03:46 pilotlog.txt
[2025-12-08 03:46:55] -rw------- 1 boincer umatlas   6167369 Dec  8 03:46 log.47523449._003988.job.log.1
[2025-12-08 03:46:55] -rw------- 1 boincer umatlas       353 Dec  8 03:46 output.list
[2025-12-08 03:46:55] -rw-r--r-- 1 boincer umatlas       620 Dec  8 03:46 runtime_log
[2025-12-08 03:46:55] -rw------- 1 boincer umatlas   8171520 Dec  8 03:46 result.tar.gz
[2025-12-08 03:46:55] -rw-r--r-- 1 boincer umatlas      9343 Dec  8 03:46 runtime_log.err
[2025-12-08 03:46:55] -rw------- 1 boincer umatlas       668 Dec  8 03:46 qVcLDm2Oam8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmrnMKDmIoBnmn.diag
[2025-12-08 03:46:55] -rw-r--r-- 1 boincer umatlas     21233 Dec  8 03:46 stderr.txt
[2025-12-08 03:46:55] HITS file was successfully produced:
[2025-12-08 03:46:55] -rw------- 1 boincer umatlas 913142246 Dec  8 03:45 shared/HITS.pool.root.1
[2025-12-08 03:46:55]  *** Contents of shared directory: ***
[2025-12-08 03:46:55] total 1300060
[2025-12-08 03:46:55] -rw-r--r-- 2 boincer umatlas 409327931 Dec  7 15:19 ATLAS.root_0
[2025-12-08 03:46:55] -rw-r--r-- 2 boincer umatlas     15847 Dec  7 15:19 start_atlas.sh
[2025-12-08 03:46:55] -rw-r--r-- 2 boincer umatlas    592571 Dec  7 15:19 input.tar.gz
[2025-12-08 03:46:55] -rw------- 1 boincer umatlas 913142246 Dec  8 03:45 HITS.pool.root.1
[2025-12-08 03:46:55] -rw------- 1 boincer umatlas   8171520 Dec  8 03:46 result.tar.gz
03:46:56 (32562): run_atlas exited; CPU time 343142.558343
03:46:56 (32562): called boinc_finish(0)

</stderr_txt>
]]>

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