Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
06:23:43 (3878268): wrapper (7.7.26015): starting
06:23:43 (3878268): wrapper: running run_atlas (--nthreads 10)
[2025-12-10 06:23:43] Arguments: --nthreads 10
[2025-12-10 06:23:43] Threads: 10
[2025-12-10 06:23:43] Checking for CVMFS
[2025-12-10 06:23:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-10 06:23:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-10 06:23:44] Running cvmfs_config stat atlas.cern.ch
[2025-12-10 06:23:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-10 06:23:44] 2.13.3.0 11319 5719 72460 153843 2 58 3837988 4096001 11747 130560 0 840963542 99.999 562319 500 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-12-10 06:23:44] CVMFS is ok
[2025-12-10 06:23:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-10 06:23:44] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-10 06:23:44] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-10 06:23:44] Further information can be found at the LHC@home message board.
[2025-12-10 06:23:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-10 06:23:44] Checking for apptainer binary...
[2025-12-10 06:23:44] apptainer is not installed, using version from CVMFS
[2025-12-10 06:23:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-10 06:23:44] 7950x-linux
[2025-12-10 06:23:44] apptainer works
[2025-12-10 06:23:44] Set ATHENA_PROC_NUMBER=10
[2025-12-10 06:23:44] Set ATHENA_CORE_NUMBER=10
[2025-12-10 06:23:44] Starting ATLAS job with PandaID=6899423918
[2025-12-10 06:23:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc543/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-11 00:08:52]  *** The last 200 lines of the pilot log: ***
[2025-12-11 00:08:52] 2025-12-11 08:08:02,697 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-11 00:08:52] 2025-12-11 08:08:02,700 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3999.9999999999986
[2025-12-11 00:08:52] 2025-12-11 08:08:02,703 | INFO     | using path: /var/lib/multiboinc/boinc543/slots/4/PanDA_Pilot-6899423918/memory_monitor_summary.json (trf name=prmon)
[2025-12-11 00:08:52] 2025-12-11 08:08:02,704 | INFO     | extracted standard info from prmon json
[2025-12-11 00:08:52] 2025-12-11 08:08:02,704 | INFO     | extracted standard memory fields from prmon json
[2025-12-11 00:08:52] 2025-12-11 08:08:02,704 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-11 00:08:52] 2025-12-11 08:08:02,712 | INFO     | fitting pss+swap vs Time
[2025-12-11 00:08:52] 2025-12-11 08:08:02,712 | INFO     | sum of square deviations: 354873100257.5
[2025-12-11 00:08:52] 2025-12-11 08:08:02,721 | INFO     | monitor loop #4597: job 0:6899423918 is in state 'finished'
[2025-12-11 00:08:52] 2025-12-11 08:08:02,721 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-11 00:08:52] 2025-12-11 08:08:02,724 | INFO     | sum of deviations: 2308123134156.501
[2025-12-11 00:08:52] 2025-12-11 08:08:02,724 | INFO     | mean x: 1765408541.5
[2025-12-11 00:08:52] 2025-12-11 08:08:02,724 | INFO     | mean y: 3170129.2323135757
[2025-12-11 00:08:52] 2025-12-11 08:08:02,724 | INFO     | intersect: -11479188756.005621
[2025-12-11 00:08:52] 2025-12-11 08:08:02,727 | INFO     | chi2: 3.8208599378278536
[2025-12-11 00:08:52] 2025-12-11 08:08:02,728 | INFO     | sum of square deviations: 349808382040.0
[2025-12-11 00:08:52] 2025-12-11 08:08:02,743 | INFO     | sum of deviations: 2565410968353.9985
[2025-12-11 00:08:52] 2025-12-11 08:08:02,743 | INFO     | mean x: 1765408389.0
[2025-12-11 00:08:52] 2025-12-11 08:08:02,743 | INFO     | mean y: 3177867.8703170028
[2025-12-11 00:08:52] 2025-12-11 08:08:02,743 | INFO     | intersect: -12943904813.089794
[2025-12-11 00:08:52] 2025-12-11 08:08:02,743 | INFO     | chi2: 2.140377473008179
[2025-12-11 00:08:52] 2025-12-11 08:08:02,743 | INFO     | current chi2=2.140377473008179 (change=43.98178661777965 %)
[2025-12-11 00:08:52] 2025-12-11 08:08:02,744 | INFO     | sum of square deviations: 344792083335.0
[2025-12-11 00:08:52] 2025-12-11 08:08:02,756 | INFO     | sum of deviations: 2567855885533.5
[2025-12-11 00:08:52] 2025-12-11 08:08:02,756 | INFO     | mean x: 1765408236.5
[2025-12-11 00:08:52] 2025-12-11 08:08:02,756 | INFO     | mean y: 3177940.2326254826
[2025-12-11 00:08:52] 2025-12-11 08:08:02,756 | INFO     | intersect: -13144786150.524279
[2025-12-11 00:08:52] 2025-12-11 08:08:02,756 | INFO     | chi2: 2.1041398147723798
[2025-12-11 00:08:52] 2025-12-11 08:08:02,756 | INFO     | current chi2=2.1041398147723798 (change=1.693049879882593 %)
[2025-12-11 00:08:52] 2025-12-11 08:08:02,756 | INFO     | right removable region: 1035
[2025-12-11 00:08:52] 2025-12-11 08:08:02,757 | INFO     | sum of square deviations: 349808382040.0
[2025-12-11 00:08:52] 2025-12-11 08:08:02,769 | INFO     | sum of deviations: 2032879930194.9995
[2025-12-11 00:08:52] 2025-12-11 08:08:02,769 | INFO     | mean x: 1765408694.0
[2025-12-11 00:08:52] 2025-12-11 08:08:02,769 | INFO     | mean y: 3178404.3938520653
[2025-12-11 00:08:52] 2025-12-11 08:08:02,769 | INFO     | intersect: -10256335337.658175
[2025-12-11 00:08:52] 2025-12-11 08:08:02,769 | INFO     | chi2: 1.951073965066659
[2025-12-11 00:08:52] 2025-12-11 08:08:02,769 | INFO     | current chi2=1.951073965066659 (change=48.93626050642834 %)
[2025-12-11 00:08:52] 2025-12-11 08:08:02,770 | INFO     | sum of square deviations: 344792083335.0
[2025-12-11 00:08:52] 2025-12-11 08:08:02,781 | INFO     | sum of deviations: 1950398005952.4995
[2025-12-11 00:08:52] 2025-12-11 08:08:02,781 | INFO     | mean x: 1765408846.5
[2025-12-11 00:08:52] 2025-12-11 08:08:02,781 | INFO     | mean y: 3180911.3349420847
[2025-12-11 00:08:52] 2025-12-11 08:08:02,781 | INFO     | intersect: -9983271969.484367
[2025-12-11 00:08:52] 2025-12-11 08:08:02,782 | INFO     | chi2: 1.8904804384326734
[2025-12-11 00:08:52] 2025-12-11 08:08:02,782 | INFO     | current chi2=1.8904804384326734 (change=3.1056498994345123 %)
[2025-12-11 00:08:52] 2025-12-11 08:08:02,782 | INFO     | left removable region: 20
[2025-12-11 00:08:52] 2025-12-11 08:08:02,783 | INFO     | sum of square deviations: 324247121380.0
[2025-12-11 00:08:52] 2025-12-11 08:08:02,793 | INFO     | sum of deviations: 2098919572562.9998
[2025-12-11 00:08:52] 2025-12-11 08:08:02,794 | INFO     | mean x: 1765408816.0
[2025-12-11 00:08:52] 2025-12-11 08:08:02,794 | INFO     | mean y: 3192143.4256157638
[2025-12-11 00:08:52] 2025-12-11 08:08:02,794 | INFO     | intersect: -11424669117.785349
[2025-12-11 00:08:52] 2025-12-11 08:08:02,794 | INFO     | chi2: 0.14461554795510748
[2025-12-11 00:08:52] 2025-12-11 08:08:02,794 | INFO     | current memory leak: 6.47 B/s (using 1015 data points, chi2=0.14)
[2025-12-11 00:08:52] 2025-12-11 08:08:02,795 | INFO     | could have reported an average CPU frequency of 3999 MHz (39 samples)
[2025-12-11 00:08:52] 2025-12-11 08:08:02,795 | INFO     | ..............................
[2025-12-11 00:08:52] 2025-12-11 08:08:02,795 | INFO     | . Timing measurements:
[2025-12-11 00:08:52] 2025-12-11 08:08:02,795 | INFO     | . get job = 0 s
[2025-12-11 00:08:52] 2025-12-11 08:08:02,795 | INFO     | . initial setup = 3 s
[2025-12-11 00:08:52] 2025-12-11 08:08:02,795 | INFO     | . payload setup = 6 s
[2025-12-11 00:08:52] 2025-12-11 08:08:02,795 | INFO     | . stage-in = 0 s
[2025-12-11 00:08:52] 2025-12-11 08:08:02,795 | INFO     | . payload execution = 63806 s
[2025-12-11 00:08:52] 2025-12-11 08:08:02,795 | INFO     | . stage-out = 3 s
[2025-12-11 00:08:52] 2025-12-11 08:08:02,795 | INFO     | . log creation = 0 s
[2025-12-11 00:08:52] 2025-12-11 08:08:02,795 | INFO     | ..............................
[2025-12-11 00:08:52] 2025-12-11 08:08:02,864 | INFO     | 
[2025-12-11 00:08:52] 2025-12-11 08:08:02,864 | INFO     | job summary report
[2025-12-11 00:08:52] 2025-12-11 08:08:02,864 | INFO     | --------------------------------------------------
[2025-12-11 00:08:52] 2025-12-11 08:08:02,864 | INFO     | PanDA job id: 6899423918
[2025-12-11 00:08:52] 2025-12-11 08:08:02,864 | INFO     | task id: 47556173
[2025-12-11 00:08:52] 2025-12-11 08:08:02,864 | INFO     | errors: (none)
[2025-12-11 00:08:52] 2025-12-11 08:08:02,864 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-11 00:08:52] 2025-12-11 08:08:02,864 | INFO     | pilot state: finished 
[2025-12-11 00:08:52] 2025-12-11 08:08:02,864 | INFO     | transexitcode: 0
[2025-12-11 00:08:52] 2025-12-11 08:08:02,864 | INFO     | exeerrorcode: 0
[2025-12-11 00:08:52] 2025-12-11 08:08:02,864 | INFO     | exeerrordiag: 
[2025-12-11 00:08:52] 2025-12-11 08:08:02,864 | INFO     | exitcode: 0
[2025-12-11 00:08:52] 2025-12-11 08:08:02,864 | INFO     | exitmsg: OK
[2025-12-11 00:08:52] 2025-12-11 08:08:02,864 | INFO     | cpuconsumptiontime: 136387 s
[2025-12-11 00:08:52] 2025-12-11 08:08:02,864 | INFO     | nevents: 1000
[2025-12-11 00:08:52] 2025-12-11 08:08:02,864 | INFO     | neventsw: 0
[2025-12-11 00:08:52] 2025-12-11 08:08:02,864 | INFO     | pid: 3899243
[2025-12-11 00:08:52] 2025-12-11 08:08:02,864 | INFO     | pgrp: 3899243
[2025-12-11 00:08:52] 2025-12-11 08:08:02,864 | INFO     | corecount: 10
[2025-12-11 00:08:52] 2025-12-11 08:08:02,864 | INFO     | event service: False
[2025-12-11 00:08:52] 2025-12-11 08:08:02,864 | INFO     | sizes: {0: 2284483, 5: 2284745, 11: 2284801, 63816: 2339253, 63820: 2348275, 63821: 2348331, 63826: 2348705}
[2025-12-11 00:08:52] 2025-12-11 08:08:02,864 | INFO     | --------------------------------------------------
[2025-12-11 00:08:52] 2025-12-11 08:08:02,865 | INFO     | 
[2025-12-11 00:08:52] 2025-12-11 08:08:02,865 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc543/slots/4
[2025-12-11 00:08:52] 2025-12-11 08:08:02,897 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-11 00:08:52] 2025-12-11 08:08:02,897 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-11 00:08:52] 2025-12-11 08:08:02,897 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-11 00:08:52] 2025-12-11 08:08:02,897 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-11 00:08:52] 2025-12-11 08:08:02,898 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-11 00:08:52] 2025-12-11 08:08:02,898 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-11 00:08:52] 2025-12-11 08:08:02,898 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-11 00:08:52] 2025-12-11 08:08:02,898 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-11 00:08:52] 2025-12-11 08:08:02,898 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-11 00:08:52] 2025-12-11 08:08:02,898 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-11 00:08:52] 2025-12-11 08:08:02,898 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-11 00:08:52] 2025-12-11 08:08:02,898 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-11 00:08:52] 2025-12-11 08:08:02,898 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-11 00:08:52] 2025-12-11 08:08:02,898 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-11 00:08:52] 2025-12-11 08:08:02,898 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-11 00:08:52] 2025-12-11 08:08:02,898 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-11 00:08:52] 2025-12-11 08:08:02,898 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-11 00:08:52] 2025-12-11 08:08:02,898 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-11 00:08:52] 2025-12-11 08:08:02,898 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-11 00:08:52] 2025-12-11 08:08:02,898 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-11 00:08:52] 2025-12-11 08:08:02,898 | INFO     | job 6899423918 has completed (purged errors)
[2025-12-11 00:08:52] 2025-12-11 08:08:02,898 | INFO     | overall cleanup function is called
[2025-12-11 00:08:52] 2025-12-11 08:08:03,918 | INFO     | --- collectZombieJob: --- 10, [3899243]
[2025-12-11 00:08:52] 2025-12-11 08:08:03,918 | INFO     | zombie collector waiting for pid 3899243
[2025-12-11 00:08:52] 2025-12-11 08:08:03,918 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-11 00:08:52] 2025-12-11 08:08:03,918 | INFO     | collected zombie processes
[2025-12-11 00:08:52] 2025-12-11 08:08:03,918 | INFO     | will attempt to kill all subprocesses of pid=3899243
[2025-12-11 00:08:52] 2025-12-11 08:08:04,219 | INFO     | process IDs to be killed: [3899243] (in reverse order)
[2025-12-11 00:08:52] 2025-12-11 08:08:04,354 | WARNING  | found no corresponding commands to process id(s)
[2025-12-11 00:08:52] 2025-12-11 08:08:04,354 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-11 00:08:52] 2025-12-11 08:08:04,360 | INFO     | did not find any defunct processes belonging to 3899243
[2025-12-11 00:08:52] 2025-12-11 08:08:04,364 | INFO     | did not find any defunct processes belonging to 3899243
[2025-12-11 00:08:52] 2025-12-11 08:08:04,364 | INFO     | ready for new job
[2025-12-11 00:08:52] 2025-12-11 08:08:04,364 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-11 00:08:52] 2025-12-11 08:08:04,368 | INFO     | ***************************************
[2025-12-11 00:08:52] 2025-12-11 08:08:04,369 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-11 00:08:52] 2025-12-11 08:08:04,369 | INFO     | ***************************************
[2025-12-11 00:08:52] 2025-12-11 08:08:04,369 | INFO     | 
[2025-12-11 00:08:52] 2025-12-11 08:08:04,370 | INFO     | architecture information:
[2025-12-11 00:08:52] 2025-12-11 08:08:04,374 | INFO     | executing command: cat /etc/os-release
[2025-12-11 00:08:52] 2025-12-11 08:08:04,395 | INFO     | cat /etc/os-release:
[2025-12-11 00:08:52] NAME="CentOS Linux"
[2025-12-11 00:08:52] VERSION="7 (Core)"
[2025-12-11 00:08:52] ID="centos"
[2025-12-11 00:08:52] ID_LIKE="rhel fedora"
[2025-12-11 00:08:52] VERSION_ID="7"
[2025-12-11 00:08:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-11 00:08:52] ANSI_COLOR="0;31"
[2025-12-11 00:08:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-11 00:08:52] HOME_URL="https://www.centos.org/"
[2025-12-11 00:08:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-11 00:08:52] 
[2025-12-11 00:08:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-11 00:08:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-11 00:08:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-11 00:08:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-11 00:08:52] 
[2025-12-11 00:08:52] 2025-12-11 08:08:04,395 | INFO     | ***************************************
[2025-12-11 00:08:52] 2025-12-11 08:08:04,897 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc543/slots/4
[2025-12-11 00:08:52] 2025-12-11 08:08:04,924 | INFO     | sufficient remaining disk space (191768821760 B)
[2025-12-11 00:08:52] 2025-12-11 08:08:04,924 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-11 00:08:52] 2025-12-11 08:08:04,924 | INFO     | current server update state: UPDATING_FINAL
[2025-12-11 00:08:52] 2025-12-11 08:08:04,924 | INFO     | update_server=False
[2025-12-11 00:08:52] 2025-12-11 08:08:04,924 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-11 00:08:52] 2025-12-11 08:08:04,925 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-11 00:08:52] 2025-12-11 08:08:04,993 | INFO     | all payload control threads have been joined
[2025-12-11 00:08:52] 2025-12-11 08:08:05,223 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-11 00:08:52] 2025-12-11 08:08:05,223 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-11 00:08:52] 2025-12-11 08:08:05,224 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-11 00:08:52] 2025-12-11 08:08:05,224 | INFO     | will abort loop
[2025-12-11 00:08:52] 2025-12-11 08:08:05,854 | INFO     | all data control threads have been joined
[2025-12-11 00:08:52] 2025-12-11 08:08:05,929 | INFO     | [job] retrieve thread has finished
[2025-12-11 00:08:52] 2025-12-11 08:08:05,998 | INFO     | [payload] control thread has finished
[2025-12-11 00:08:52] 2025-12-11 08:08:06,001 | INFO     | [job] validate thread has finished
[2025-12-11 00:08:52] 2025-12-11 08:08:06,102 | INFO     | all job control threads have been joined
[2025-12-11 00:08:52] 2025-12-11 08:08:06,149 | INFO     | [data] copytool_in thread has finished
[2025-12-11 00:08:52] 2025-12-11 08:08:06,229 | INFO     | [job] job monitor thread has finished
[2025-12-11 00:08:52] 2025-12-11 08:08:06,695 | INFO     | [payload] validate_post thread has finished
[2025-12-11 00:08:52] 2025-12-11 08:08:06,859 | INFO     | [data] control thread has finished
[2025-12-11 00:08:52] 2025-12-11 08:08:06,930 | INFO     | [data] copytool_out thread has finished
[2025-12-11 00:08:52] 2025-12-11 08:08:07,106 | INFO     | [job] create_data_payload thread has finished
[2025-12-11 00:08:52] 2025-12-11 08:08:07,107 | INFO     | [job] control thread has finished
[2025-12-11 00:08:52] 2025-12-11 08:08:07,343 | INFO     | [payload] execute_payloads thread has finished
[2025-12-11 00:08:52] 2025-12-11 08:08:07,346 | INFO     | [payload] validate_pre thread has finished
[2025-12-11 00:08:52] 2025-12-11 08:08:07,425 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-11 00:08:52] 2025-12-11 08:08:07,527 | INFO     | [payload] failed_post thread has finished
[2025-12-11 00:08:52] 2025-12-11 08:08:07,849 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-11 00:08:52] 2025-12-11 08:08:08,189 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-11 00:08:52] 2025-12-11 08:08:08,854 | INFO     | [job] queue monitor thread has finished
[2025-12-11 00:08:52] 2025-12-11 08:08:12,194 | INFO     | [data] queue_monitor thread has finished
[2025-12-11 00:08:52] 2025-12-11 08:08:34,580 | INFO     | PID=3885919 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-11 00:08:52] 2025-12-11 08:08:34,580 | INFO     | .. there are 14 such processes running
[2025-12-11 00:08:52] 2025-12-11 08:08:34,581 | INFO     | found 0 job(s) in 20 queues
[2025-12-11 00:08:52] 2025-12-11 08:08:34,581 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-11 00:08:52] 2025-12-11 08:08:34,581 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-11 00:08:52] 2025-12-11 08:08:46,022 | INFO     | [monitor] cgroup control has ended
[2025-12-11 00:08:52] 2025-12-11 08:08:47,608 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126870394689344)>', '<ExcThread(monitor, started 126869743580928)>']
[2025-12-11 00:08:52] 2025-12-11 08:08:47,646 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-11 00:08:52] 2025-12-11 08:08:47,646 | INFO     | [monitor] control thread has ended
[2025-12-11 00:08:52] 2025-12-11 08:08:52,633 | INFO     | all workflow threads have been joined
[2025-12-11 00:08:52] 2025-12-11 08:08:52,633 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-11 00:08:52] 2025-12-11 08:08:52,633 | INFO     | traces error code: 0
[2025-12-11 00:08:52] 2025-12-11 08:08:52,633 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-11 00:08:52] 2025-12-11 08:08:52,723 [wrapper] ==== pilot stdout END ====
[2025-12-11 00:08:52] 2025-12-11 08:08:52,729 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-11 00:08:52] 2025-12-11 08:08:52,730 [wrapper] pilotpid: 3885919
[2025-12-11 00:08:52] 2025-12-11 08:08:52,732 [wrapper] Pilot exit status: 0
[2025-12-11 00:08:52] 2025-12-11 08:08:52,738 [wrapper] pandaids: 6899423918
[2025-12-11 00:08:52] 2025-12-11 08:08:52,781 [wrapper] cleanup supervisor_pilot 1207686 3885920
[2025-12-11 00:08:52] 2025-12-11 08:08:52,783 [wrapper] Test setup, not cleaning
[2025-12-11 00:08:52] 2025-12-11 08:08:52,785 [wrapper] apfmon messages muted
[2025-12-11 00:08:52] 2025-12-11 08:08:52,786 [wrapper] ==== wrapper stdout END ====
[2025-12-11 00:08:52] 2025-12-11 08:08:52,787 [wrapper] ==== wrapper stderr END ====
[2025-12-11 00:08:52]  *** Error codes and diagnostics ***
[2025-12-11 00:08:52]     "exeErrorCode": 0,
[2025-12-11 00:08:52]     "exeErrorDiag": "",
[2025-12-11 00:08:52]     "pilotErrorCode": 0,
[2025-12-11 00:08:52]     "pilotErrorDiag": "",
[2025-12-11 00:08:52]  *** Listing of results directory ***
[2025-12-11 00:08:52] total 1324916
[2025-12-11 00:08:52] -rw-r--r-- 1 root root    579449 Dec  7 08:00 pilot3.tar.gz
[2025-12-11 00:08:52] -rwx------ 1 4871 1028     36292 Dec  7 08:04 runpilot2-wrapper.sh
[2025-12-11 00:08:52] -rw-r--r-- 1 root root      5112 Dec  7 08:04 queuedata.json
[2025-12-11 00:08:52] -rw-r--r-- 1 root root       100 Dec 10 06:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-11 00:08:52] -rwxr-xr-x 1 root root      7986 Dec 10 06:23 run_atlas
[2025-12-11 00:08:52] -rw-r--r-- 1 root root       105 Dec 10 06:23 job.xml
[2025-12-11 00:08:52] -rw-r--r-- 1 root root      7069 Dec 10 06:23 init_data.xml
[2025-12-11 00:08:52] -rw-r--r-- 2 root root 409979854 Dec 10 06:23 EVNT.47483658._003284.pool.root.1
[2025-12-11 00:08:52] -rw-r--r-- 2 root root     15847 Dec 10 06:23 start_atlas.sh
[2025-12-11 00:08:52] drwxrwx--x 2 root root      4096 Dec 10 06:23 shared
[2025-12-11 00:08:52] -rw-r--r-- 2 root root    592577 Dec 10 06:23 input.tar.gz
[2025-12-11 00:08:52] -rw-r--r-- 1 root root         0 Dec 10 06:23 boinc_lockfile
[2025-12-11 00:08:52] -rw-r--r-- 1 root root      2787 Dec 10 06:23 pandaJob.out
[2025-12-11 00:08:52] -rw------- 1 root root    993129 Dec 10 06:23 agis_schedconf.cvmfs.json
[2025-12-11 00:08:52] drwxr-xr-x 5  320  320      4096 Dec 10 06:24 pilot3
[2025-12-11 00:08:52] -rw-r--r-- 1 root root       533 Dec 10 23:59 boinc_task_state.xml
[2025-12-11 00:08:52] -rw------- 1 root root 919958712 Dec 11 00:07 HITS.47556173._002406.pool.root.1
[2025-12-11 00:08:52] -rw------- 1 root root      1051 Dec 11 00:07 memory_monitor_summary.json
[2025-12-11 00:08:52] -rw------- 1 root root   1516240 Dec 11 00:07 agis_ddmendpoints.agis.ALL.json
[2025-12-11 00:08:52] -rw------- 1 root root   2393011 Dec 11 00:07 log.47556173._002406.job.log.tgz.1
[2025-12-11 00:08:52] -rw------- 1 root root      8600 Dec 11 00:08 heartbeat.json
[2025-12-11 00:08:52] -rw------- 1 root root        95 Dec 11 00:08 pilot_heartbeat.json
[2025-12-11 00:08:52] -rw-r--r-- 1 root root        29 Dec 11 00:08 wrapper_checkpoint.txt
[2025-12-11 00:08:52] -rw-r--r-- 1 root root      8192 Dec 11 00:08 boinc_mmap_file
[2025-12-11 00:08:52] -rw------- 1 root root      5025 Dec 11 00:08 pilotlog.txt
[2025-12-11 00:08:52] -rw------- 1 root root   9030906 Dec 11 00:08 log.47556173._002406.job.log.1
[2025-12-11 00:08:52] -rw------- 1 root root       353 Dec 11 00:08 output.list
[2025-12-11 00:08:52] -rw-r--r-- 1 root root       620 Dec 11 00:08 runtime_log
[2025-12-11 00:08:52] -rw------- 1 root root  11448320 Dec 11 00:08 result.tar.gz
[2025-12-11 00:08:52] -rw------- 1 root root       663 Dec 11 00:08 vbJODmnQWm8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPBQKDmhFk0Ao.diag
[2025-12-11 00:08:52] -rw-r--r-- 1 root root      9021 Dec 11 00:08 runtime_log.err
[2025-12-11 00:08:52] -rw-r--r-- 1 root root     21305 Dec 11 00:08 stderr.txt
[2025-12-11 00:08:52] HITS file was successfully produced:
[2025-12-11 00:08:52] -rw------- 1 root root 919958712 Dec 11 00:07 shared/HITS.pool.root.1
[2025-12-11 00:08:52]  *** Contents of shared directory: ***
[2025-12-11 00:08:52] total 1310556
[2025-12-11 00:08:52] -rw-r--r-- 2 root root 409979854 Dec 10 06:23 ATLAS.root_0
[2025-12-11 00:08:52] -rw-r--r-- 2 root root     15847 Dec 10 06:23 start_atlas.sh
[2025-12-11 00:08:52] -rw-r--r-- 2 root root    592577 Dec 10 06:23 input.tar.gz
[2025-12-11 00:08:52] -rw------- 1 root root 919958712 Dec 11 00:07 HITS.pool.root.1
[2025-12-11 00:08:52] -rw------- 1 root root  11448320 Dec 11 00:08 result.tar.gz
00:08:54 (3878268): run_atlas exited; CPU time 136778.390608
00:08:54 (3878268): called boinc_finish(0)

</stderr_txt>
]]>

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