Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:40:48 (29745): wrapper (7.7.26015): starting
10:40:48 (29745): wrapper: running run_atlas (--nthreads 8)
[2025-12-07 10:40:48] Arguments: --nthreads 8
[2025-12-07 10:40:48] Threads: 8
[2025-12-07 10:40:48] Checking for CVMFS
[2025-12-07 10:40:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-07 10:40:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-07 10:40:49] Running cvmfs_config stat atlas.cern.ch
[2025-12-07 10:40:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-07 10:40:49] 2.11.2.0 31887 22420 85392 153732 1 1 14929497 20275201 1 130560 0 6511110 99.873 1448809 37251 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-07 10:40:49] CVMFS is ok
[2025-12-07 10:40:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-07 10:40:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-07 10:40:49] Further information can be found at the LHC@home message board.
[2025-12-07 10:40:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-07 10:40:49] Checking for apptainer binary...
[2025-12-07 10:40:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-07 10:40:49] Running /usr/bin/apptainer --version
[2025-12-07 10:40:49] apptainer version 1.3.2-1.el7
[2025-12-07 10:40:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-07 10:40:51] c-204-12.aglt2.org
[2025-12-07 10:40:51] apptainer works
[2025-12-07 10:40:51] Set ATHENA_PROC_NUMBER=8
[2025-12-07 10:40:51] Set ATHENA_CORE_NUMBER=8
[2025-12-07 10:40:51] Starting ATLAS job with PandaID=6899448715
[2025-12-07 10:40:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-07 23:34:34]  *** The last 200 lines of the pilot log: ***
[2025-12-07 23:34:34] 2025-12-08 04:33:24,039 | INFO     | monitor loop #3406: job 0:6899448715 is in state 'finished'
[2025-12-07 23:34:34] 2025-12-08 04:33:24,039 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-07 23:34:34] 2025-12-08 04:33:25,829 | INFO     | time since job start (46334s) is within the limit (174528.0s)
[2025-12-07 23:34:34] 2025-12-08 04:33:26,542 | INFO     | monitor loop #3407: job 0:6899448715 is in state 'finished'
[2025-12-07 23:34:34] 2025-12-08 04:33:26,543 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-07 23:34:34] 2025-12-08 04:33:26,556 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-07 23:34:34] 2025-12-08 04:33:26,558 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1812.25
[2025-12-07 23:34:34] 2025-12-08 04:33:26,560 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6899448715/memory_monitor_summary.json (trf name=prmon)
[2025-12-07 23:34:34] 2025-12-08 04:33:26,560 | INFO     | extracted standard info from prmon json
[2025-12-07 23:34:34] 2025-12-08 04:33:26,560 | INFO     | extracted standard memory fields from prmon json
[2025-12-07 23:34:34] 2025-12-08 04:33:26,560 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-07 23:34:34] 2025-12-08 04:33:26,573 | INFO     | fitting pss+swap vs Time
[2025-12-07 23:34:34] 2025-12-08 04:33:26,574 | INFO     | sum of square deviations: 135582504309.89754
[2025-12-07 23:34:34] 2025-12-08 04:33:26,585 | INFO     | sum of deviations: 917196367773.6172
[2025-12-07 23:34:34] 2025-12-08 04:33:26,586 | INFO     | mean x: 1765145223.549407
[2025-12-07 23:34:34] 2025-12-08 04:33:26,586 | INFO     | mean y: 2869389.703557312
[2025-12-07 23:34:34] 2025-12-08 04:33:26,586 | INFO     | intersect: -11938087121.41083
[2025-12-07 23:34:34] 2025-12-08 04:33:26,587 | INFO     | chi2: 5.233216929432572
[2025-12-07 23:34:34] 2025-12-08 04:33:26,587 | INFO     | sum of square deviations: 132920749025.87814
[2025-12-07 23:34:34] 2025-12-08 04:33:26,599 | INFO     | sum of deviations: 1144585708476.1777
[2025-12-07 23:34:34] 2025-12-08 04:33:26,599 | INFO     | mean x: 1765145071.0530503
[2025-12-07 23:34:34] 2025-12-08 04:33:26,599 | INFO     | mean y: 2882412.270557029
[2025-12-07 23:34:34] 2025-12-08 04:33:26,599 | INFO     | intersect: -15196850033.723616
[2025-12-07 23:34:34] 2025-12-08 04:33:26,600 | INFO     | chi2: 2.6112322193317983
[2025-12-07 23:34:34] 2025-12-08 04:33:26,600 | INFO     | current chi2=2.6112322193317983 (change=50.10273308859511 %)
[2025-12-07 23:34:34] 2025-12-08 04:33:26,601 | INFO     | sum of square deviations: 130294064166.8384
[2025-12-07 23:34:34] 2025-12-08 04:33:26,613 | INFO     | sum of deviations: 1206056375919.6072
[2025-12-07 23:34:34] 2025-12-08 04:33:26,613 | INFO     | mean x: 1765144918.5567424
[2025-12-07 23:34:34] 2025-12-08 04:33:26,613 | INFO     | mean y: 2885972.691588785
[2025-12-07 23:34:34] 2025-12-08 04:33:26,613 | INFO     | intersect: -16336033970.134783
[2025-12-07 23:34:34] 2025-12-08 04:33:26,614 | INFO     | chi2: 2.2623813807723345
[2025-12-07 23:34:34] 2025-12-08 04:33:26,614 | INFO     | current chi2=2.2623813807723345 (change=13.359625236576356 %)
[2025-12-07 23:34:34] 2025-12-08 04:33:26,614 | INFO     | right removable region: 748
[2025-12-07 23:34:34] 2025-12-08 04:33:26,615 | INFO     | sum of square deviations: 132920494655.87816
[2025-12-07 23:34:34] 2025-12-08 04:33:26,627 | INFO     | sum of deviations: 716426441477.6858
[2025-12-07 23:34:34] 2025-12-08 04:33:26,627 | INFO     | mean x: 1765145376.0530503
[2025-12-07 23:34:34] 2025-12-08 04:33:26,627 | INFO     | mean y: 2880873.1578249335
[2025-12-07 23:34:34] 2025-12-08 04:33:26,627 | INFO     | intersect: -9511053179.904728
[2025-12-07 23:34:34] 2025-12-08 04:33:26,628 | INFO     | chi2: 3.1472711556583386
[2025-12-07 23:34:34] 2025-12-08 04:33:26,628 | INFO     | current chi2=3.1472711556583386 (change=39.85972303273904 %)
[2025-12-07 23:34:34] 2025-12-08 04:33:26,629 | INFO     | sum of square deviations: 130293601176.9505
[2025-12-07 23:34:34] 2025-12-08 04:33:26,640 | INFO     | sum of deviations: 673036067884.649
[2025-12-07 23:34:34] 2025-12-08 04:33:26,640 | INFO     | mean x: 1765145528.5554073
[2025-12-07 23:34:34] 2025-12-08 04:33:26,640 | INFO     | mean y: 2883390.851802403
[2025-12-07 23:34:34] 2025-12-08 04:33:26,641 | INFO     | intersect: -9115036407.601547
[2025-12-07 23:34:34] 2025-12-08 04:33:26,641 | INFO     | chi2: 3.1093982142337673
[2025-12-07 23:34:34] 2025-12-08 04:33:26,641 | INFO     | current chi2=3.1093982142337673 (change=1.2033580696242598 %)
[2025-12-07 23:34:34] 2025-12-08 04:33:26,642 | INFO     | left removable region: 20
[2025-12-07 23:34:34] 2025-12-08 04:33:26,642 | INFO     | sum of square deviations: 119638961567.96568
[2025-12-07 23:34:34] 2025-12-08 04:33:26,653 | INFO     | sum of deviations: 912487168672.8754
[2025-12-07 23:34:34] 2025-12-08 04:33:26,653 | INFO     | mean x: 1765145498.0645604
[2025-12-07 23:34:34] 2025-12-08 04:33:26,653 | INFO     | mean y: 2903519.875
[2025-12-07 23:34:34] 2025-12-08 04:33:26,654 | INFO     | intersect: -13459873126.757763
[2025-12-07 23:34:34] 2025-12-08 04:33:26,654 | INFO     | chi2: 0.11283183434231644
[2025-12-07 23:34:34] 2025-12-08 04:33:26,655 | INFO     | current memory leak: 7.63 B/s (using 728 data points, chi2=0.11)
[2025-12-07 23:34:34] 2025-12-08 04:33:26,655 | INFO     | could have reported an average CPU frequency of 2175 MHz (29 samples)
[2025-12-07 23:34:34] 2025-12-08 04:33:26,656 | INFO     | ..............................
[2025-12-07 23:34:34] 2025-12-08 04:33:26,656 | INFO     | . Timing measurements:
[2025-12-07 23:34:34] 2025-12-08 04:33:26,656 | INFO     | . get job = 0 s
[2025-12-07 23:34:34] 2025-12-08 04:33:26,656 | INFO     | . initial setup = 2 s
[2025-12-07 23:34:34] 2025-12-08 04:33:26,656 | INFO     | . payload setup = 9 s
[2025-12-07 23:34:34] 2025-12-08 04:33:26,656 | INFO     | . stage-in = 0 s
[2025-12-07 23:34:34] 2025-12-08 04:33:26,656 | INFO     | . payload execution = 46290 s
[2025-12-07 23:34:34] 2025-12-08 04:33:26,657 | INFO     | . stage-out = 3 s
[2025-12-07 23:34:34] 2025-12-08 04:33:26,657 | INFO     | . log creation = 0 s
[2025-12-07 23:34:34] 2025-12-08 04:33:26,657 | INFO     | ..............................
[2025-12-07 23:34:34] 2025-12-08 04:33:26,747 | INFO     | 
[2025-12-07 23:34:34] 2025-12-08 04:33:26,747 | INFO     | job summary report
[2025-12-07 23:34:34] 2025-12-08 04:33:26,747 | INFO     | --------------------------------------------------
[2025-12-07 23:34:34] 2025-12-08 04:33:26,748 | INFO     | PanDA job id: 6899448715
[2025-12-07 23:34:34] 2025-12-08 04:33:26,748 | INFO     | task id: 47556173
[2025-12-07 23:34:34] 2025-12-08 04:33:26,748 | INFO     | errors: (none)
[2025-12-07 23:34:34] 2025-12-08 04:33:26,748 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-07 23:34:34] 2025-12-08 04:33:26,748 | INFO     | pilot state: finished 
[2025-12-07 23:34:34] 2025-12-08 04:33:26,748 | INFO     | transexitcode: 0
[2025-12-07 23:34:34] 2025-12-08 04:33:26,749 | INFO     | exeerrorcode: 0
[2025-12-07 23:34:34] 2025-12-08 04:33:26,749 | INFO     | exeerrordiag: 
[2025-12-07 23:34:34] 2025-12-08 04:33:26,749 | INFO     | exitcode: 0
[2025-12-07 23:34:34] 2025-12-08 04:33:26,749 | INFO     | exitmsg: OK
[2025-12-07 23:34:34] 2025-12-08 04:33:26,749 | INFO     | cpuconsumptiontime: 359227 s
[2025-12-07 23:34:34] 2025-12-08 04:33:26,749 | INFO     | nevents: 1000
[2025-12-07 23:34:34] 2025-12-08 04:33:26,750 | INFO     | neventsw: 0
[2025-12-07 23:34:34] 2025-12-08 04:33:26,750 | INFO     | pid: 8005
[2025-12-07 23:34:34] 2025-12-08 04:33:26,750 | INFO     | pgrp: 8005
[2025-12-07 23:34:34] 2025-12-08 04:33:26,750 | INFO     | corecount: 8
[2025-12-07 23:34:34] 2025-12-08 04:33:26,750 | INFO     | event service: False
[2025-12-07 23:34:34] 2025-12-08 04:33:26,750 | INFO     | sizes: {0: 2284469, 1: 2284469, 7: 2284759, 11: 2284787, 46304: 2331212, 46308: 2340206, 46311: 2340390, 46318: 2340636}
[2025-12-07 23:34:34] 2025-12-08 04:33:26,751 | INFO     | --------------------------------------------------
[2025-12-07 23:34:34] 2025-12-08 04:33:26,751 | INFO     | 
[2025-12-07 23:34:34] 2025-12-08 04:33:26,751 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-07 23:34:34] 2025-12-08 04:33:26,780 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-07 23:34:34] 2025-12-08 04:33:26,780 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-07 23:34:34] 2025-12-08 04:33:26,780 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-07 23:34:34] 2025-12-08 04:33:26,781 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-07 23:34:34] 2025-12-08 04:33:26,781 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-07 23:34:34] 2025-12-08 04:33:26,781 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-07 23:34:34] 2025-12-08 04:33:26,781 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-07 23:34:34] 2025-12-08 04:33:26,781 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-07 23:34:34] 2025-12-08 04:33:26,781 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-07 23:34:34] 2025-12-08 04:33:26,782 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-07 23:34:34] 2025-12-08 04:33:26,782 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-07 23:34:34] 2025-12-08 04:33:26,782 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-07 23:34:34] 2025-12-08 04:33:26,782 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-07 23:34:34] 2025-12-08 04:33:26,782 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-07 23:34:34] 2025-12-08 04:33:26,783 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-07 23:34:34] 2025-12-08 04:33:26,783 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-07 23:34:34] 2025-12-08 04:33:26,783 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-07 23:34:34] 2025-12-08 04:33:26,783 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-07 23:34:34] 2025-12-08 04:33:26,783 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-07 23:34:34] 2025-12-08 04:33:26,784 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-07 23:34:34] 2025-12-08 04:33:26,784 | INFO     | job 6899448715 has completed (purged errors)
[2025-12-07 23:34:34] 2025-12-08 04:33:26,784 | INFO     | overall cleanup function is called
[2025-12-07 23:34:34] 2025-12-08 04:33:27,799 | INFO     | --- collectZombieJob: --- 10, [8005]
[2025-12-07 23:34:34] 2025-12-08 04:33:27,799 | INFO     | zombie collector waiting for pid 8005
[2025-12-07 23:34:34] 2025-12-08 04:33:27,799 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-07 23:34:34] 2025-12-08 04:33:27,799 | INFO     | collected zombie processes
[2025-12-07 23:34:34] 2025-12-08 04:33:27,800 | INFO     | will attempt to kill all subprocesses of pid=8005
[2025-12-07 23:34:34] 2025-12-08 04:33:27,887 | INFO     | process IDs to be killed: [8005] (in reverse order)
[2025-12-07 23:34:34] 2025-12-08 04:33:27,943 | WARNING  | found no corresponding commands to process id(s)
[2025-12-07 23:34:34] 2025-12-08 04:33:27,943 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-07 23:34:34] 2025-12-08 04:33:27,947 | INFO     | did not find any defunct processes belonging to 8005
[2025-12-07 23:34:34] 2025-12-08 04:33:27,949 | INFO     | did not find any defunct processes belonging to 8005
[2025-12-07 23:34:34] 2025-12-08 04:33:27,950 | INFO     | ready for new job
[2025-12-07 23:34:34] 2025-12-08 04:33:27,950 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-07 23:34:34] 2025-12-08 04:33:27,953 | INFO     | ***************************************
[2025-12-07 23:34:34] 2025-12-08 04:33:27,953 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-07 23:34:34] 2025-12-08 04:33:27,953 | INFO     | ***************************************
[2025-12-07 23:34:34] 2025-12-08 04:33:27,954 | INFO     | 
[2025-12-07 23:34:34] 2025-12-08 04:33:27,954 | INFO     | architecture information:
[2025-12-07 23:34:34] 2025-12-08 04:33:27,955 | INFO     | executing command: cat /etc/os-release
[2025-12-07 23:34:34] 2025-12-08 04:33:27,974 | INFO     | cat /etc/os-release:
[2025-12-07 23:34:34] NAME="CentOS Linux"
[2025-12-07 23:34:34] VERSION="7 (Core)"
[2025-12-07 23:34:34] ID="centos"
[2025-12-07 23:34:34] ID_LIKE="rhel fedora"
[2025-12-07 23:34:34] VERSION_ID="7"
[2025-12-07 23:34:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-07 23:34:34] ANSI_COLOR="0;31"
[2025-12-07 23:34:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-07 23:34:34] HOME_URL="https://www.centos.org/"
[2025-12-07 23:34:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-07 23:34:34] 
[2025-12-07 23:34:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-07 23:34:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-07 23:34:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-07 23:34:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-07 23:34:34] 
[2025-12-07 23:34:34] 2025-12-08 04:33:27,974 | INFO     | ***************************************
[2025-12-07 23:34:34] 2025-12-08 04:33:28,477 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-07 23:34:34] 2025-12-08 04:33:28,498 | INFO     | sufficient remaining disk space (17462984704 B)
[2025-12-07 23:34:34] 2025-12-08 04:33:28,498 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-07 23:34:34] 2025-12-08 04:33:28,499 | INFO     | current server update state: UPDATING_FINAL
[2025-12-07 23:34:34] 2025-12-08 04:33:28,499 | INFO     | update_server=False
[2025-12-07 23:34:34] 2025-12-08 04:33:28,499 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-07 23:34:34] 2025-12-08 04:33:28,500 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-07 23:34:34] 2025-12-08 04:33:28,500 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-07 23:34:34] 2025-12-08 04:33:28,500 | INFO     | aborting loop
[2025-12-07 23:34:34] 2025-12-08 04:33:28,558 | INFO     | all job control threads have been joined
[2025-12-07 23:34:34] 2025-12-08 04:33:28,561 | INFO     | all payload control threads have been joined
[2025-12-07 23:34:34] 2025-12-08 04:33:29,064 | INFO     | all data control threads have been joined
[2025-12-07 23:34:34] 2025-12-08 04:33:29,447 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-07 23:34:34] 2025-12-08 04:33:29,503 | INFO     | [job] job monitor thread has finished
[2025-12-07 23:34:34] 2025-12-08 04:33:29,505 | INFO     | [job] retrieve thread has finished
[2025-12-07 23:34:34] 2025-12-08 04:33:29,505 | INFO     | [job] queue monitor thread has finished
[2025-12-07 23:34:34] 2025-12-08 04:33:29,561 | INFO     | [job] control thread has finished
[2025-12-07 23:34:34] 2025-12-08 04:33:29,566 | INFO     | [payload] control thread has finished
[2025-12-07 23:34:34] 2025-12-08 04:33:29,627 | INFO     | [payload] validate_post thread has finished
[2025-12-07 23:34:34] 2025-12-08 04:33:29,742 | INFO     | [job] validate thread has finished
[2025-12-07 23:34:34] 2025-12-08 04:33:30,036 | INFO     | [payload] execute_payloads thread has finished
[2025-12-07 23:34:34] 2025-12-08 04:33:30,042 | INFO     | [data] copytool_in thread has finished
[2025-12-07 23:34:34] 2025-12-08 04:33:30,053 | INFO     | [job] create_data_payload thread has finished
[2025-12-07 23:34:34] 2025-12-08 04:33:30,060 | INFO     | [payload] validate_pre thread has finished
[2025-12-07 23:34:34] 2025-12-08 04:33:30,065 | INFO     | [data] control thread has finished
[2025-12-07 23:34:34] 2025-12-08 04:33:30,491 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-07 23:34:34] 2025-12-08 04:33:30,522 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-07 23:34:34] 2025-12-08 04:33:30,639 | INFO     | [payload] failed_post thread has finished
[2025-12-07 23:34:34] 2025-12-08 04:33:31,449 | INFO     | [data] copytool_out thread has finished
[2025-12-07 23:34:34] 2025-12-08 04:33:34,497 | INFO     | [data] queue_monitor thread has finished
[2025-12-07 23:34:34] 2025-12-08 04:33:59,046 | INFO     | PID=1442 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-07 23:34:34] 2025-12-08 04:33:59,046 | INFO     | found 0 job(s) in 20 queues
[2025-12-07 23:34:34] 2025-12-08 04:33:59,051 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-07 23:34:34] 2025-12-08 04:33:59,051 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-07 23:34:34] 2025-12-08 04:34:28,181 | INFO     | [monitor] cgroup control has ended
[2025-12-07 23:34:34] 2025-12-08 04:34:28,811 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140251960874816)>', '<ExcThread(monitor, started 140251016197888)>']
[2025-12-07 23:34:34] 2025-12-08 04:34:29,194 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-07 23:34:34] 2025-12-08 04:34:29,194 | INFO     | [monitor] control thread has ended
[2025-12-07 23:34:34] 2025-12-08 04:34:33,815 | INFO     | all workflow threads have been joined
[2025-12-07 23:34:34] 2025-12-08 04:34:33,816 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-07 23:34:34] 2025-12-08 04:34:33,816 | INFO     | traces error code: 0
[2025-12-07 23:34:34] 2025-12-08 04:34:33,816 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-07 23:34:34] 2025-12-08 04:34:33,930 [wrapper] ==== pilot stdout END ====
[2025-12-07 23:34:34] 2025-12-08 04:34:33,935 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-07 23:34:34] 2025-12-08 04:34:33,940 [wrapper] pilotpid: 1442
[2025-12-07 23:34:34] 2025-12-08 04:34:33,945 [wrapper] Pilot exit status: 0
[2025-12-07 23:34:34] 2025-12-08 04:34:33,963 [wrapper] pandaids: 6899448715
[2025-12-07 23:34:34] 2025-12-08 04:34:34,014 [wrapper] cleanup supervisor_pilot  5383 1443
[2025-12-07 23:34:34] 2025-12-08 04:34:34,020 [wrapper] Test setup, not cleaning
[2025-12-07 23:34:34] 2025-12-08 04:34:34,025 [wrapper] apfmon messages muted
[2025-12-07 23:34:34] 2025-12-08 04:34:34,030 [wrapper] ==== wrapper stdout END ====
[2025-12-07 23:34:34] 2025-12-08 04:34:34,036 [wrapper] ==== wrapper stderr END ====
[2025-12-07 23:34:34]  *** Error codes and diagnostics ***
[2025-12-07 23:34:34]     "exeErrorCode": 0,
[2025-12-07 23:34:34]     "exeErrorDiag": "",
[2025-12-07 23:34:34]     "pilotErrorCode": 0,
[2025-12-07 23:34:34]     "pilotErrorDiag": "",
[2025-12-07 23:34:34]  *** Listing of results directory ***
[2025-12-07 23:34:34] total 1319792
[2025-12-07 23:34:34] -rw-r--r-- 1 boincer umatlas    579449 Dec  7 09:46 pilot3.tar.gz
[2025-12-07 23:34:34] -rwx------ 1 boincer umatlas     36292 Dec  7 10:39 runpilot2-wrapper.sh
[2025-12-07 23:34:34] -rw-r--r-- 1 boincer umatlas      5112 Dec  7 10:39 queuedata.json
[2025-12-07 23:34:34] -rw-r--r-- 1 boincer umatlas       100 Dec  7 10:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-07 23:34:34] -rwxr-xr-x 1 boincer umatlas      7986 Dec  7 10:40 run_atlas
[2025-12-07 23:34:34] -rw-r--r-- 1 boincer umatlas       105 Dec  7 10:40 job.xml
[2025-12-07 23:34:34] -rw-r--r-- 2 boincer umatlas 410624488 Dec  7 10:40 EVNT.47483658._003298.pool.root.1
[2025-12-07 23:34:34] -rw-r--r-- 2 boincer umatlas     15847 Dec  7 10:40 start_atlas.sh
[2025-12-07 23:34:34] drwxrwx--x 2 boincer umatlas      4096 Dec  7 10:40 shared
[2025-12-07 23:34:34] -rw-r--r-- 2 boincer umatlas    592583 Dec  7 10:40 input.tar.gz
[2025-12-07 23:34:34] -rw-r--r-- 1 boincer umatlas         0 Dec  7 10:40 boinc_lockfile
[2025-12-07 23:34:34] -rw-r--r-- 1 boincer umatlas      2787 Dec  7 10:40 pandaJob.out
[2025-12-07 23:34:34] -rw------- 1 boincer umatlas        57 Dec  7 10:40 setup.sh.local
[2025-12-07 23:34:34] -rw------- 1 boincer umatlas    981451 Dec  7 10:41 agis_schedconf.cvmfs.json
[2025-12-07 23:34:34] drwx------ 5 boincer umatlas      4096 Dec  7 10:41 pilot3
[2025-12-07 23:34:34] -rw-r--r-- 1 boincer umatlas       533 Dec  7 23:21 boinc_task_state.xml
[2025-12-07 23:34:34] -rw-r--r-- 1 boincer umatlas      5913 Dec  7 23:27 init_data.xml
[2025-12-07 23:34:34] -rw------- 1 boincer umatlas 920175788 Dec  7 23:32 HITS.47556173._002550.pool.root.1
[2025-12-07 23:34:34] -rw------- 1 boincer umatlas      1073 Dec  7 23:33 memory_monitor_summary.json
[2025-12-07 23:34:34] -rw------- 1 boincer umatlas   1516240 Dec  7 23:33 agis_ddmendpoints.agis.ALL.json
[2025-12-07 23:34:34] -rw------- 1 boincer umatlas   2006418 Dec  7 23:33 log.47556173._002550.job.log.tgz.1
[2025-12-07 23:34:34] -rw------- 1 boincer umatlas        95 Dec  7 23:33 pilot_heartbeat.json
[2025-12-07 23:34:34] -rw------- 1 boincer umatlas      8673 Dec  7 23:33 heartbeat.json
[2025-12-07 23:34:34] -rw-r--r-- 1 boincer umatlas        29 Dec  7 23:34 wrapper_checkpoint.txt
[2025-12-07 23:34:34] -rw-r--r-- 1 boincer umatlas      8192 Dec  7 23:34 boinc_mmap_file
[2025-12-07 23:34:34] -rw------- 1 boincer umatlas      4745 Dec  7 23:34 pilotlog.txt
[2025-12-07 23:34:34] -rw------- 1 boincer umatlas   6372156 Dec  7 23:34 log.47556173._002550.job.log.1
[2025-12-07 23:34:34] -rw------- 1 boincer umatlas       353 Dec  7 23:34 output.list
[2025-12-07 23:34:34] -rw-r--r-- 1 boincer umatlas       620 Dec  7 23:34 runtime_log
[2025-12-07 23:34:34] -rw------- 1 boincer umatlas   8396800 Dec  7 23:34 result.tar.gz
[2025-12-07 23:34:34] -rw-r--r-- 1 boincer umatlas      9343 Dec  7 23:34 runtime_log.err
[2025-12-07 23:34:34] -rw------- 1 boincer umatlas       668 Dec  7 23:34 1izNDmo2Vm8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmWnMKDmJMYddm.diag
[2025-12-07 23:34:34] -rw-r--r-- 1 boincer umatlas     21214 Dec  7 23:34 stderr.txt
[2025-12-07 23:34:34] HITS file was successfully produced:
[2025-12-07 23:34:34] -rw------- 1 boincer umatlas 920175788 Dec  7 23:32 shared/HITS.pool.root.1
[2025-12-07 23:34:34]  *** Contents of shared directory: ***
[2025-12-07 23:34:34] total 1308416
[2025-12-07 23:34:34] -rw-r--r-- 2 boincer umatlas 410624488 Dec  7 10:40 ATLAS.root_0
[2025-12-07 23:34:34] -rw-r--r-- 2 boincer umatlas     15847 Dec  7 10:40 start_atlas.sh
[2025-12-07 23:34:34] -rw-r--r-- 2 boincer umatlas    592583 Dec  7 10:40 input.tar.gz
[2025-12-07 23:34:34] -rw------- 1 boincer umatlas 920175788 Dec  7 23:32 HITS.pool.root.1
[2025-12-07 23:34:34] -rw------- 1 boincer umatlas   8396800 Dec  7 23:34 result.tar.gz
23:34:35 (29745): run_atlas exited; CPU time 355203.725788
23:34:35 (29745): called boinc_finish(0)

</stderr_txt>
]]>

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