Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
05:05:26 (3768551): wrapper (7.7.26015): starting
05:05:26 (3768551): wrapper: running run_atlas (--nthreads 10)
[2025-12-10 05:05:26] Arguments: --nthreads 10
[2025-12-10 05:05:26] Threads: 10
[2025-12-10 05:05:26] Checking for CVMFS
[2025-12-10 05:05:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-10 05:05:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-10 05:05:27] Running cvmfs_config stat atlas.cern.ch
[2025-12-10 05:05:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-10 05:05:27] 2.13.3.0 11319 5641 73064 153841 0 273 3820002 4096001 9755 130560 0 832168822 99.999 559650 500 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-12-10 05:05:27] CVMFS is ok
[2025-12-10 05:05:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-10 05:05:27] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-10 05:05:27] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-10 05:05:27] Further information can be found at the LHC@home message board.
[2025-12-10 05:05:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-10 05:05:27] Checking for apptainer binary...
[2025-12-10 05:05:27] apptainer is not installed, using version from CVMFS
[2025-12-10 05:05:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-10 05:05:27] 7950x-linux
[2025-12-10 05:05:27] apptainer works
[2025-12-10 05:05:27] Set ATHENA_PROC_NUMBER=10
[2025-12-10 05:05:27] Set ATHENA_CORE_NUMBER=10
[2025-12-10 05:05:27] Starting ATLAS job with PandaID=6899449034
[2025-12-10 05:05:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc543/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-10 22:21:45]  *** The last 200 lines of the pilot log: ***
[2025-12-10 22:21:45] 2025-12-11 06:21:12,486 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-10 22:21:45] 2025-12-11 06:21:12,489 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3999.9934062499997
[2025-12-10 22:21:45] 2025-12-11 06:21:12,492 | INFO     | using path: /var/lib/multiboinc/boinc543/slots/1/PanDA_Pilot-6899449034/memory_monitor_summary.json (trf name=prmon)
[2025-12-10 22:21:45] 2025-12-11 06:21:12,492 | INFO     | extracted standard info from prmon json
[2025-12-10 22:21:45] 2025-12-11 06:21:12,493 | INFO     | extracted standard memory fields from prmon json
[2025-12-10 22:21:45] 2025-12-11 06:21:12,493 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-10 22:21:45] 2025-12-11 06:21:12,502 | INFO     | fitting pss+swap vs Time
[2025-12-10 22:21:45] 2025-12-11 06:21:12,503 | INFO     | sum of square deviations: 327130868722.4647
[2025-12-10 22:21:45] 2025-12-11 06:21:12,522 | INFO     | sum of deviations: 2241129761972.78
[2025-12-10 22:21:45] 2025-12-11 06:21:12,522 | INFO     | mean x: 1765402986.505894
[2025-12-10 22:21:45] 2025-12-11 06:21:12,522 | INFO     | mean y: 3167293.536345776
[2025-12-10 22:21:45] 2025-12-11 06:21:12,522 | INFO     | intersect: -12091372088.776272
[2025-12-10 22:21:45] 2025-12-11 06:21:12,523 | INFO     | chi2: 4.006167877955206
[2025-12-10 22:21:45] 2025-12-11 06:21:12,524 | INFO     | sum of square deviations: 322334306199.9645
[2025-12-10 22:21:45] 2025-12-11 06:21:12,539 | INFO     | sum of deviations: 2491296939108.7236
[2025-12-10 22:21:45] 2025-12-11 06:21:12,539 | INFO     | mean x: 1765402834.005923
[2025-12-10 22:21:45] 2025-12-11 06:21:12,539 | INFO     | mean y: 3175238.5459032576
[2025-12-10 22:21:45] 2025-12-11 06:21:12,540 | INFO     | intersect: -13641486815.90006
[2025-12-10 22:21:45] 2025-12-11 06:21:12,540 | INFO     | chi2: 2.3264353678349723
[2025-12-10 22:21:45] 2025-12-11 06:21:12,540 | INFO     | current chi2=2.3264353678349723 (change=41.92866003852011 %)
[2025-12-10 22:21:45] 2025-12-11 06:21:12,541 | INFO     | sum of square deviations: 317584860839.9641
[2025-12-10 22:21:45] 2025-12-11 06:21:12,559 | INFO     | monitor loop #4482: job 0:6899449034 is in state 'finished'
[2025-12-10 22:21:45] 2025-12-11 06:21:12,559 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-10 22:21:45] 2025-12-11 06:21:12,560 | INFO     | sum of deviations: 2494919245490.6084
[2025-12-10 22:21:45] 2025-12-11 06:21:12,560 | INFO     | mean x: 1765402681.5059524
[2025-12-10 22:21:45] 2025-12-11 06:21:12,560 | INFO     | mean y: 3175352.0654761903
[2025-12-10 22:21:45] 2025-12-11 06:21:12,560 | INFO     | intersect: -13865675683.467485
[2025-12-10 22:21:45] 2025-12-11 06:21:12,560 | INFO     | chi2: 2.276161853627165
[2025-12-10 22:21:45] 2025-12-11 06:21:12,561 | INFO     | current chi2=2.276161853627165 (change=2.160967585985111 %)
[2025-12-10 22:21:45] 2025-12-11 06:21:12,561 | INFO     | right removable region: 1007
[2025-12-10 22:21:45] 2025-12-11 06:21:12,561 | INFO     | sum of square deviations: 322334302539.9645
[2025-12-10 22:21:45] 2025-12-11 06:21:12,574 | INFO     | sum of deviations: 1963877433507.3118
[2025-12-10 22:21:45] 2025-12-11 06:21:12,574 | INFO     | mean x: 1765403139.005923
[2025-12-10 22:21:45] 2025-12-11 06:21:12,574 | INFO     | mean y: 3176095.615004936
[2025-12-10 22:21:45] 2025-12-11 06:21:12,574 | INFO     | intersect: -10752847568.068275
[2025-12-10 22:21:45] 2025-12-11 06:21:12,575 | INFO     | chi2: 2.0616212197667436
[2025-12-10 22:21:45] 2025-12-11 06:21:12,575 | INFO     | current chi2=2.0616212197667436 (change=48.53882107359368 %)
[2025-12-10 22:21:45] 2025-12-11 06:21:12,575 | INFO     | sum of square deviations: 317584853519.9641
[2025-12-10 22:21:45] 2025-12-11 06:21:12,588 | INFO     | sum of deviations: 1872107291636.3015
[2025-12-10 22:21:45] 2025-12-11 06:21:12,589 | INFO     | mean x: 1765403291.5059524
[2025-12-10 22:21:45] 2025-12-11 06:21:12,589 | INFO     | mean y: 3179041.532738095
[2025-12-10 22:21:45] 2025-12-11 06:21:12,589 | INFO     | intersect: -10403565291.755371
[2025-12-10 22:21:45] 2025-12-11 06:21:12,589 | INFO     | chi2: 1.9714667244732529
[2025-12-10 22:21:45] 2025-12-11 06:21:12,589 | INFO     | current chi2=1.9714667244732529 (change=4.37299026751825 %)
[2025-12-10 22:21:45] 2025-12-11 06:21:12,589 | INFO     | left removable region: 20
[2025-12-10 22:21:45] 2025-12-11 06:21:12,590 | INFO     | sum of square deviations: 298146446631.9636
[2025-12-10 22:21:45] 2025-12-11 06:21:12,604 | INFO     | sum of deviations: 1989036356090.3389
[2025-12-10 22:21:45] 2025-12-11 06:21:12,605 | INFO     | mean x: 1765403261.006079
[2025-12-10 22:21:45] 2025-12-11 06:21:12,608 | INFO     | mean y: 3191601.609929078
[2025-12-10 22:21:45] 2025-12-11 06:21:12,608 | INFO     | intersect: -11774414031.356478
[2025-12-10 22:21:45] 2025-12-11 06:21:12,608 | INFO     | chi2: 0.17511625384106638
[2025-12-10 22:21:45] 2025-12-11 06:21:12,608 | INFO     | current memory leak: 6.67 B/s (using 987 data points, chi2=0.18)
[2025-12-10 22:21:45] 2025-12-11 06:21:12,609 | INFO     | could have reported an average CPU frequency of 3999 MHz (38 samples)
[2025-12-10 22:21:45] 2025-12-11 06:21:12,609 | INFO     | ..............................
[2025-12-10 22:21:45] 2025-12-11 06:21:12,609 | INFO     | . Timing measurements:
[2025-12-10 22:21:45] 2025-12-11 06:21:12,609 | INFO     | . get job = 0 s
[2025-12-10 22:21:45] 2025-12-11 06:21:12,609 | INFO     | . initial setup = 3 s
[2025-12-10 22:21:45] 2025-12-11 06:21:12,609 | INFO     | . payload setup = 6 s
[2025-12-10 22:21:45] 2025-12-11 06:21:12,609 | INFO     | . stage-in = 0 s
[2025-12-10 22:21:45] 2025-12-11 06:21:12,609 | INFO     | . payload execution = 62096 s
[2025-12-10 22:21:45] 2025-12-11 06:21:12,609 | INFO     | . stage-out = 4 s
[2025-12-10 22:21:45] 2025-12-11 06:21:12,609 | INFO     | . log creation = 0 s
[2025-12-10 22:21:45] 2025-12-11 06:21:12,609 | INFO     | ..............................
[2025-12-10 22:21:45] 2025-12-11 06:21:12,662 | INFO     | 
[2025-12-10 22:21:45] 2025-12-11 06:21:12,663 | INFO     | job summary report
[2025-12-10 22:21:45] 2025-12-11 06:21:12,663 | INFO     | --------------------------------------------------
[2025-12-10 22:21:45] 2025-12-11 06:21:12,663 | INFO     | PanDA job id: 6899449034
[2025-12-10 22:21:45] 2025-12-11 06:21:12,663 | INFO     | task id: 47556173
[2025-12-10 22:21:45] 2025-12-11 06:21:12,663 | INFO     | errors: (none)
[2025-12-10 22:21:45] 2025-12-11 06:21:12,663 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-10 22:21:45] 2025-12-11 06:21:12,663 | INFO     | pilot state: finished 
[2025-12-10 22:21:45] 2025-12-11 06:21:12,663 | INFO     | transexitcode: 0
[2025-12-10 22:21:45] 2025-12-11 06:21:12,663 | INFO     | exeerrorcode: 0
[2025-12-10 22:21:45] 2025-12-11 06:21:12,663 | INFO     | exeerrordiag: 
[2025-12-10 22:21:45] 2025-12-11 06:21:12,663 | INFO     | exitcode: 0
[2025-12-10 22:21:45] 2025-12-11 06:21:12,663 | INFO     | exitmsg: OK
[2025-12-10 22:21:45] 2025-12-11 06:21:12,663 | INFO     | cpuconsumptiontime: 134981 s
[2025-12-10 22:21:45] 2025-12-11 06:21:12,663 | INFO     | nevents: 1000
[2025-12-10 22:21:45] 2025-12-11 06:21:12,663 | INFO     | neventsw: 0
[2025-12-10 22:21:45] 2025-12-11 06:21:12,663 | INFO     | pid: 3779116
[2025-12-10 22:21:45] 2025-12-11 06:21:12,663 | INFO     | pgrp: 3779116
[2025-12-10 22:21:45] 2025-12-11 06:21:12,663 | INFO     | corecount: 10
[2025-12-10 22:21:45] 2025-12-11 06:21:12,663 | INFO     | event service: False
[2025-12-10 22:21:45] 2025-12-11 06:21:12,663 | INFO     | sizes: {0: 2284312, 1: 2284511, 5: 2284773, 11: 2284829, 62102: 2337926, 62103: 2337925, 62108: 2347131, 62109: 2347187, 62116: 2347433}
[2025-12-10 22:21:45] 2025-12-11 06:21:12,663 | INFO     | --------------------------------------------------
[2025-12-10 22:21:45] 2025-12-11 06:21:12,663 | INFO     | 
[2025-12-10 22:21:45] 2025-12-11 06:21:12,663 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc543/slots/1
[2025-12-10 22:21:45] 2025-12-11 06:21:12,692 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-10 22:21:45] 2025-12-11 06:21:12,692 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-10 22:21:45] 2025-12-11 06:21:12,692 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-10 22:21:45] 2025-12-11 06:21:12,692 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-10 22:21:45] 2025-12-11 06:21:12,693 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-10 22:21:45] 2025-12-11 06:21:12,693 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-10 22:21:45] 2025-12-11 06:21:12,693 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-10 22:21:45] 2025-12-11 06:21:12,693 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-10 22:21:45] 2025-12-11 06:21:12,693 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-10 22:21:45] 2025-12-11 06:21:12,693 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-10 22:21:45] 2025-12-11 06:21:12,693 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-10 22:21:45] 2025-12-11 06:21:12,693 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-10 22:21:45] 2025-12-11 06:21:12,693 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-10 22:21:45] 2025-12-11 06:21:12,693 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-10 22:21:45] 2025-12-11 06:21:12,693 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-10 22:21:45] 2025-12-11 06:21:12,693 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-10 22:21:45] 2025-12-11 06:21:12,693 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-10 22:21:45] 2025-12-11 06:21:12,693 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-10 22:21:45] 2025-12-11 06:21:12,693 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-10 22:21:45] 2025-12-11 06:21:12,693 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-10 22:21:45] 2025-12-11 06:21:12,693 | INFO     | job 6899449034 has completed (purged errors)
[2025-12-10 22:21:45] 2025-12-11 06:21:12,693 | INFO     | overall cleanup function is called
[2025-12-10 22:21:45] 2025-12-11 06:21:13,708 | INFO     | --- collectZombieJob: --- 10, [3779116]
[2025-12-10 22:21:45] 2025-12-11 06:21:13,708 | INFO     | zombie collector waiting for pid 3779116
[2025-12-10 22:21:45] 2025-12-11 06:21:13,708 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-10 22:21:45] 2025-12-11 06:21:13,708 | INFO     | collected zombie processes
[2025-12-10 22:21:45] 2025-12-11 06:21:13,708 | INFO     | will attempt to kill all subprocesses of pid=3779116
[2025-12-10 22:21:45] 2025-12-11 06:21:13,993 | INFO     | process IDs to be killed: [3779116] (in reverse order)
[2025-12-10 22:21:45] 2025-12-11 06:21:14,114 | WARNING  | found no corresponding commands to process id(s)
[2025-12-10 22:21:45] 2025-12-11 06:21:14,114 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-10 22:21:45] 2025-12-11 06:21:14,120 | INFO     | did not find any defunct processes belonging to 3779116
[2025-12-10 22:21:45] 2025-12-11 06:21:14,124 | INFO     | did not find any defunct processes belonging to 3779116
[2025-12-10 22:21:45] 2025-12-11 06:21:14,124 | INFO     | ready for new job
[2025-12-10 22:21:45] 2025-12-11 06:21:14,124 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-10 22:21:45] 2025-12-11 06:21:14,127 | INFO     | ***************************************
[2025-12-10 22:21:45] 2025-12-11 06:21:14,127 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-10 22:21:45] 2025-12-11 06:21:14,127 | INFO     | ***************************************
[2025-12-10 22:21:45] 2025-12-11 06:21:14,127 | INFO     | 
[2025-12-10 22:21:45] 2025-12-11 06:21:14,128 | INFO     | architecture information:
[2025-12-10 22:21:45] 2025-12-11 06:21:14,129 | INFO     | executing command: cat /etc/os-release
[2025-12-10 22:21:45] 2025-12-11 06:21:14,142 | INFO     | cat /etc/os-release:
[2025-12-10 22:21:45] NAME="CentOS Linux"
[2025-12-10 22:21:45] VERSION="7 (Core)"
[2025-12-10 22:21:45] ID="centos"
[2025-12-10 22:21:45] ID_LIKE="rhel fedora"
[2025-12-10 22:21:45] VERSION_ID="7"
[2025-12-10 22:21:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-10 22:21:45] ANSI_COLOR="0;31"
[2025-12-10 22:21:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-10 22:21:45] HOME_URL="https://www.centos.org/"
[2025-12-10 22:21:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-10 22:21:45] 
[2025-12-10 22:21:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-10 22:21:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-10 22:21:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-10 22:21:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-10 22:21:45] 
[2025-12-10 22:21:45] 2025-12-11 06:21:14,142 | INFO     | ***************************************
[2025-12-10 22:21:45] 2025-12-11 06:21:14,644 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc543/slots/1
[2025-12-10 22:21:45] 2025-12-11 06:21:14,661 | INFO     | sufficient remaining disk space (190488510464 B)
[2025-12-10 22:21:45] 2025-12-11 06:21:14,661 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-10 22:21:45] 2025-12-11 06:21:14,662 | INFO     | current server update state: UPDATING_FINAL
[2025-12-10 22:21:45] 2025-12-11 06:21:14,662 | INFO     | update_server=False
[2025-12-10 22:21:45] 2025-12-11 06:21:14,662 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-10 22:21:45] 2025-12-11 06:21:14,662 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-10 22:21:45] 2025-12-11 06:21:14,679 | INFO     | all data control threads have been joined
[2025-12-10 22:21:45] 2025-12-11 06:21:14,963 | INFO     | all job control threads have been joined
[2025-12-10 22:21:45] 2025-12-11 06:21:15,061 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-10 22:21:45] 2025-12-11 06:21:15,061 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-10 22:21:45] 2025-12-11 06:21:15,061 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-10 22:21:45] 2025-12-11 06:21:15,061 | INFO     | will abort loop
[2025-12-10 22:21:45] 2025-12-11 06:21:15,258 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-10 22:21:45] 2025-12-11 06:21:15,664 | INFO     | all payload control threads have been joined
[2025-12-10 22:21:45] 2025-12-11 06:21:15,667 | INFO     | [job] retrieve thread has finished
[2025-12-10 22:21:45] 2025-12-11 06:21:15,667 | INFO     | [job] queue monitor thread has finished
[2025-12-10 22:21:45] 2025-12-11 06:21:15,684 | INFO     | [data] control thread has finished
[2025-12-10 22:21:45] 2025-12-11 06:21:15,968 | INFO     | [job] control thread has finished
[2025-12-10 22:21:45] 2025-12-11 06:21:16,066 | INFO     | [job] job monitor thread has finished
[2025-12-10 22:21:45] 2025-12-11 06:21:16,105 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-10 22:21:45] 2025-12-11 06:21:16,131 | INFO     | [payload] failed_post thread has finished
[2025-12-10 22:21:45] 2025-12-11 06:21:16,194 | INFO     | [payload] validate_pre thread has finished
[2025-12-10 22:21:45] 2025-12-11 06:21:16,218 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-10 22:21:45] 2025-12-11 06:21:16,258 | INFO     | [data] copytool_in thread has finished
[2025-12-10 22:21:45] 2025-12-11 06:21:16,567 | INFO     | [payload] execute_payloads thread has finished
[2025-12-10 22:21:45] 2025-12-11 06:21:16,609 | INFO     | [payload] validate_post thread has finished
[2025-12-10 22:21:45] 2025-12-11 06:21:16,669 | INFO     | [payload] control thread has finished
[2025-12-10 22:21:45] 2025-12-11 06:21:16,888 | INFO     | [job] validate thread has finished
[2025-12-10 22:21:45] 2025-12-11 06:21:17,145 | INFO     | [job] create_data_payload thread has finished
[2025-12-10 22:21:45] 2025-12-11 06:21:17,263 | INFO     | [data] copytool_out thread has finished
[2025-12-10 22:21:45] 2025-12-11 06:21:20,223 | INFO     | [data] queue_monitor thread has finished
[2025-12-10 22:21:45] 2025-12-11 06:21:23,634 | INFO     | [monitor] cgroup control has ended
[2025-12-10 22:21:45] 2025-12-11 06:21:23,971 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132390658934592)>', '<ExcThread(monitor, started 132390303274752)>']
[2025-12-10 22:21:45] 2025-12-11 06:21:28,996 | INFO     | all workflow threads have been joined
[2025-12-10 22:21:45] 2025-12-11 06:21:28,996 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-10 22:21:45] 2025-12-11 06:21:28,996 | INFO     | traces error code: 0
[2025-12-10 22:21:45] 2025-12-11 06:21:28,996 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-10 22:21:45] 2025-12-11 06:21:44,844 | INFO     | PID=3772437 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-10 22:21:45] 2025-12-11 06:21:44,844 | INFO     | .. there are 14 such processes running
[2025-12-10 22:21:45] 2025-12-11 06:21:44,845 | INFO     | found 0 job(s) in 20 queues
[2025-12-10 22:21:45] 2025-12-11 06:21:44,845 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-10 22:21:45] 2025-12-11 06:21:44,845 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-10 22:21:45] 2025-12-11 06:21:44,845 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-10 22:21:45] 2025-12-11 06:21:44,845 | INFO     | [monitor] control thread has ended
[2025-12-10 22:21:45] 2025-12-11 06:21:44,949 [wrapper] ==== pilot stdout END ====
[2025-12-10 22:21:45] 2025-12-11 06:21:44,950 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-10 22:21:45] 2025-12-11 06:21:44,952 [wrapper] pilotpid: 3772437
[2025-12-10 22:21:45] 2025-12-11 06:21:44,955 [wrapper] Pilot exit status: 0
[2025-12-10 22:21:45] 2025-12-11 06:21:44,966 [wrapper] pandaids: 6899449034
[2025-12-10 22:21:45] 2025-12-11 06:21:45,016 [wrapper] cleanup supervisor_pilot 1064704 3772438
[2025-12-10 22:21:45] 2025-12-11 06:21:45,021 [wrapper] Test setup, not cleaning
[2025-12-10 22:21:45] 2025-12-11 06:21:45,023 [wrapper] apfmon messages muted
[2025-12-10 22:21:45] 2025-12-11 06:21:45,025 [wrapper] ==== wrapper stdout END ====
[2025-12-10 22:21:45] 2025-12-11 06:21:45,029 [wrapper] ==== wrapper stderr END ====
[2025-12-10 22:21:45]  *** Error codes and diagnostics ***
[2025-12-10 22:21:45]     "exeErrorCode": 0,
[2025-12-10 22:21:45]     "exeErrorDiag": "",
[2025-12-10 22:21:45]     "pilotErrorCode": 0,
[2025-12-10 22:21:45]     "pilotErrorDiag": "",
[2025-12-10 22:21:45]  *** Listing of results directory ***
[2025-12-10 22:21:45] total 1316056
[2025-12-10 22:21:45] -rw-r--r-- 1 root root    579449 Dec  7 06:46 pilot3.tar.gz
[2025-12-10 22:21:45] -rw-r--r-- 1 root root      5112 Dec  7 07:06 queuedata.json
[2025-12-10 22:21:45] -rwx------ 1 4871 1028     36292 Dec  7 07:07 runpilot2-wrapper.sh
[2025-12-10 22:21:45] -rw-r--r-- 1 root root       100 Dec 10 05:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-10 22:21:45] -rwxr-xr-x 1 root root      7986 Dec 10 05:05 run_atlas
[2025-12-10 22:21:45] -rw-r--r-- 1 root root       105 Dec 10 05:05 job.xml
[2025-12-10 22:21:45] -rw-r--r-- 2 root root 410794396 Dec 10 05:05 EVNT.47483658._003304.pool.root.1
[2025-12-10 22:21:45] -rw-r--r-- 2 root root     15847 Dec 10 05:05 start_atlas.sh
[2025-12-10 22:21:45] drwxrwx--x 2 root root      4096 Dec 10 05:05 shared
[2025-12-10 22:21:45] -rw-r--r-- 2 root root    592570 Dec 10 05:05 input.tar.gz
[2025-12-10 22:21:45] -rw-r--r-- 1 root root         0 Dec 10 05:05 boinc_lockfile
[2025-12-10 22:21:45] -rw-r--r-- 1 root root      2787 Dec 10 05:05 pandaJob.out
[2025-12-10 22:21:45] -rw------- 1 root root    993213 Dec 10 05:05 agis_schedconf.cvmfs.json
[2025-12-10 22:21:45] drwxr-xr-x 5  320  320      4096 Dec 10 05:05 pilot3
[2025-12-10 22:21:45] -rw-r--r-- 1 root root      7076 Dec 10 06:23 init_data.xml
[2025-12-10 22:21:45] -rw-r--r-- 1 root root       532 Dec 10 22:13 boinc_task_state.xml
[2025-12-10 22:21:45] -rw------- 1 root root 910496977 Dec 10 22:20 HITS.47556173._002602.pool.root.1
[2025-12-10 22:21:45] -rw------- 1 root root      1050 Dec 10 22:20 memory_monitor_summary.json
[2025-12-10 22:21:45] -rw------- 1 root root   1516240 Dec 10 22:21 agis_ddmendpoints.agis.ALL.json
[2025-12-10 22:21:45] -rw------- 1 root root   2380716 Dec 10 22:21 log.47556173._002602.job.log.tgz.1
[2025-12-10 22:21:45] -rw------- 1 root root      8612 Dec 10 22:21 heartbeat.json
[2025-12-10 22:21:45] -rw-r--r-- 1 root root      8192 Dec 10 22:21 boinc_mmap_file
[2025-12-10 22:21:45] -rw-r--r-- 1 root root        29 Dec 10 22:21 wrapper_checkpoint.txt
[2025-12-10 22:21:45] -rw------- 1 root root       823 Dec 10 22:21 pilotlog.txt
[2025-12-10 22:21:45] -rw------- 1 root root        95 Dec 10 22:21 pilot_heartbeat.json
[2025-12-10 22:21:45] -rw------- 1 root root   8831481 Dec 10 22:21 log.47556173._002602.job.log.1
[2025-12-10 22:21:45] -rw------- 1 root root       353 Dec 10 22:21 output.list
[2025-12-10 22:21:45] -rw-r--r-- 1 root root       620 Dec 10 22:21 runtime_log
[2025-12-10 22:21:45] -rw------- 1 root root  11233280 Dec 10 22:21 result.tar.gz
[2025-12-10 22:21:45] -rw-r--r-- 1 root root      9021 Dec 10 22:21 runtime_log.err
[2025-12-10 22:21:45] -rw------- 1 root root       663 Dec 10 22:21 HI0NDmDXVm8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmVnMKDmW5sO9m.diag
[2025-12-10 22:21:45] -rw-r--r-- 1 root root     21379 Dec 10 22:21 stderr.txt
[2025-12-10 22:21:45] HITS file was successfully produced:
[2025-12-10 22:21:45] -rw------- 1 root root 910496977 Dec 10 22:20 shared/HITS.pool.root.1
[2025-12-10 22:21:45]  *** Contents of shared directory: ***
[2025-12-10 22:21:45] total 1301904
[2025-12-10 22:21:45] -rw-r--r-- 2 root root 410794396 Dec 10 05:05 ATLAS.root_0
[2025-12-10 22:21:45] -rw-r--r-- 2 root root     15847 Dec 10 05:05 start_atlas.sh
[2025-12-10 22:21:45] -rw-r--r-- 2 root root    592570 Dec 10 05:05 input.tar.gz
[2025-12-10 22:21:45] -rw------- 1 root root 910496977 Dec 10 22:20 HITS.pool.root.1
[2025-12-10 22:21:45] -rw------- 1 root root  11233280 Dec 10 22:21 result.tar.gz
22:21:46 (3768551): run_atlas exited; CPU time 135058.431123
22:21:46 (3768551): called boinc_finish(0)

</stderr_txt>
]]>

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