Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
11:24:16 (2199765): wrapper (7.7.26015): starting
11:24:16 (2199765): wrapper: running run_atlas (--nthreads 10)
[2025-12-09 11:24:16] Arguments: --nthreads 10
[2025-12-09 11:24:16] Threads: 10
[2025-12-09 11:24:16] Checking for CVMFS
[2025-12-09 11:24:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-09 11:24:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-09 11:24:16] Running cvmfs_config stat atlas.cern.ch
[2025-12-09 11:24:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-09 11:24:16] 2.13.3.0 11319 4580 60640 153816 3 110 2789705 4096001 13433 130560 0 665669148 100.000 256422 593 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-12-09 11:24:16] CVMFS is ok
[2025-12-09 11:24:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-09 11:24:16] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-09 11:24:16] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-09 11:24:16] Further information can be found at the LHC@home message board.
[2025-12-09 11:24:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-09 11:24:16] Checking for apptainer binary...
[2025-12-09 11:24:16] apptainer is not installed, using version from CVMFS
[2025-12-09 11:24:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-09 11:24:17] 7950x-linux
[2025-12-09 11:24:17] apptainer works
[2025-12-09 11:24:17] Set ATHENA_PROC_NUMBER=10
[2025-12-09 11:24:17] Set ATHENA_CORE_NUMBER=10
[2025-12-09 11:24:17] Starting ATLAS job with PandaID=6899010861
[2025-12-09 11:24:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc543/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-10 05:05:20]  *** The last 200 lines of the pilot log: ***
[2025-12-10 05:05:20] 2025-12-10 13:04:16,247 | INFO     | monitor loop #4608: job 0:6899010861 is in state 'finished'
[2025-12-10 05:05:20] 2025-12-10 13:04:16,247 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-10 05:05:20] 2025-12-10 13:04:16,684 | INFO     | time since job start (63587s) is within the limit (174528.0s)
[2025-12-10 05:05:20] 2025-12-10 13:04:18,430 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-10 05:05:20] 2025-12-10 13:04:18,433 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3999.9927187500007
[2025-12-10 05:05:20] 2025-12-10 13:04:18,436 | INFO     | using path: /var/lib/multiboinc/boinc543/slots/1/PanDA_Pilot-6899010861/memory_monitor_summary.json (trf name=prmon)
[2025-12-10 05:05:20] 2025-12-10 13:04:18,436 | INFO     | extracted standard info from prmon json
[2025-12-10 05:05:20] 2025-12-10 13:04:18,436 | INFO     | extracted standard memory fields from prmon json
[2025-12-10 05:05:20] 2025-12-10 13:04:18,437 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-10 05:05:20] 2025-12-10 13:04:18,446 | INFO     | fitting pss+swap vs Time
[2025-12-10 05:05:20] 2025-12-10 13:04:18,446 | INFO     | sum of square deviations: 350816617909.94684
[2025-12-10 05:05:20] 2025-12-10 13:04:18,460 | INFO     | sum of deviations: 2602857007190.919
[2025-12-10 05:05:20] 2025-12-10 13:04:18,460 | INFO     | mean x: 1765340049.5230327
[2025-12-10 05:05:20] 2025-12-10 13:04:18,460 | INFO     | mean y: 3163023.5451055663
[2025-12-10 05:05:20] 2025-12-10 13:04:18,460 | INFO     | intersect: -13094642164.107916
[2025-12-10 05:05:20] 2025-12-10 13:04:18,461 | INFO     | chi2: 4.112178719618568
[2025-12-10 05:05:20] 2025-12-10 13:04:18,461 | INFO     | sum of square deviations: 345790661227.4466
[2025-12-10 05:05:20] 2025-12-10 13:04:18,474 | INFO     | sum of deviations: 2858772018771.7837
[2025-12-10 05:05:20] 2025-12-10 13:04:18,474 | INFO     | mean x: 1765339897.0231438
[2025-12-10 05:05:20] 2025-12-10 13:04:18,474 | INFO     | mean y: 3170778.925747348
[2025-12-10 05:05:20] 2025-12-10 13:04:18,474 | INFO     | intersect: -14591509954.547606
[2025-12-10 05:05:20] 2025-12-10 13:04:18,475 | INFO     | chi2: 2.3488954425235677
[2025-12-10 05:05:20] 2025-12-10 13:04:18,475 | INFO     | current chi2=2.3488954425235677 (change=42.87953898216167 %)
[2025-12-10 05:05:20] 2025-12-10 13:04:18,475 | INFO     | sum of square deviations: 340812938007.4418
[2025-12-10 05:05:20] 2025-12-10 13:04:18,487 | INFO     | sum of deviations: 2859584777097.999
[2025-12-10 05:05:20] 2025-12-10 13:04:18,487 | INFO     | mean x: 1765339744.5232558
[2025-12-10 05:05:20] 2025-12-10 13:04:18,487 | INFO     | mean y: 3170801.8333333335
[2025-12-10 05:05:20] 2025-12-10 13:04:18,487 | INFO     | intersect: -14808880317.34849
[2025-12-10 05:05:20] 2025-12-10 13:04:18,488 | INFO     | chi2: 2.3086348342047773
[2025-12-10 05:05:20] 2025-12-10 13:04:18,488 | INFO     | current chi2=2.3086348342047773 (change=1.7140230080031098 %)
[2025-12-10 05:05:20] 2025-12-10 13:04:18,488 | INFO     | right removable region: 1031
[2025-12-10 05:05:20] 2025-12-10 13:04:18,488 | INFO     | sum of square deviations: 345790646587.4466
[2025-12-10 05:05:20] 2025-12-10 13:04:18,500 | INFO     | sum of deviations: 2317834857034.3936
[2025-12-10 05:05:20] 2025-12-10 13:04:18,500 | INFO     | mean x: 1765340202.0231438
[2025-12-10 05:05:20] 2025-12-10 13:04:18,500 | INFO     | mean y: 3171659.775313404
[2025-12-10 05:05:20] 2025-12-10 13:04:18,500 | INFO     | intersect: -11829904495.275105
[2025-12-10 05:05:20] 2025-12-10 13:04:18,501 | INFO     | chi2: 2.174283237207164
[2025-12-10 05:05:20] 2025-12-10 13:04:18,501 | INFO     | current chi2=2.174283237207164 (change=47.12576020020737 %)
[2025-12-10 05:05:20] 2025-12-10 13:04:18,501 | INFO     | sum of square deviations: 340812908727.4418
[2025-12-10 05:05:20] 2025-12-10 13:04:18,513 | INFO     | sum of deviations: 2215468072197.048
[2025-12-10 05:05:20] 2025-12-10 13:04:18,513 | INFO     | mean x: 1765340354.5232558
[2025-12-10 05:05:20] 2025-12-10 13:04:18,513 | INFO     | mean y: 3174795.4980620155
[2025-12-10 05:05:20] 2025-12-10 13:04:18,513 | INFO     | intersect: -11472491447.927822
[2025-12-10 05:05:20] 2025-12-10 13:04:18,514 | INFO     | chi2: 2.0697209020533727
[2025-12-10 05:05:20] 2025-12-10 13:04:18,514 | INFO     | current chi2=2.0697209020533727 (change=4.809048488461892 %)
[2025-12-10 05:05:20] 2025-12-10 13:04:18,514 | INFO     | left removable region: 20
[2025-12-10 05:05:20] 2025-12-10 13:04:18,514 | INFO     | sum of square deviations: 320427902863.4278
[2025-12-10 05:05:20] 2025-12-10 13:04:18,526 | INFO     | sum of deviations: 2317994700753.8413
[2025-12-10 05:05:20] 2025-12-10 13:04:18,526 | INFO     | mean x: 1765340324.0237389
[2025-12-10 05:05:20] 2025-12-10 13:04:18,526 | INFO     | mean y: 3187385.4648862514
[2025-12-10 05:05:20] 2025-12-10 13:04:18,526 | INFO     | intersect: -12767390580.893436
[2025-12-10 05:05:20] 2025-12-10 13:04:18,526 | INFO     | chi2: 0.18485718900128156
[2025-12-10 05:05:20] 2025-12-10 13:04:18,527 | INFO     | current memory leak: 7.23 B/s (using 1011 data points, chi2=0.18)
[2025-12-10 05:05:20] 2025-12-10 13:04:18,527 | INFO     | could have reported an average CPU frequency of 3999 MHz (39 samples)
[2025-12-10 05:05:20] 2025-12-10 13:04:18,527 | INFO     | ..............................
[2025-12-10 05:05:20] 2025-12-10 13:04:18,527 | INFO     | . Timing measurements:
[2025-12-10 05:05:20] 2025-12-10 13:04:18,527 | INFO     | . get job = 0 s
[2025-12-10 05:05:20] 2025-12-10 13:04:18,527 | INFO     | . initial setup = 3 s
[2025-12-10 05:05:20] 2025-12-10 13:04:18,527 | INFO     | . payload setup = 7 s
[2025-12-10 05:05:20] 2025-12-10 13:04:18,527 | INFO     | . stage-in = 0 s
[2025-12-10 05:05:20] 2025-12-10 13:04:18,527 | INFO     | . payload execution = 63550 s
[2025-12-10 05:05:20] 2025-12-10 13:04:18,528 | INFO     | . stage-out = 3 s
[2025-12-10 05:05:20] 2025-12-10 13:04:18,528 | INFO     | . log creation = 0 s
[2025-12-10 05:05:20] 2025-12-10 13:04:18,528 | INFO     | ..............................
[2025-12-10 05:05:20] 2025-12-10 13:04:18,579 | INFO     | 
[2025-12-10 05:05:20] 2025-12-10 13:04:18,579 | INFO     | job summary report
[2025-12-10 05:05:20] 2025-12-10 13:04:18,579 | INFO     | --------------------------------------------------
[2025-12-10 05:05:20] 2025-12-10 13:04:18,579 | INFO     | PanDA job id: 6899010861
[2025-12-10 05:05:20] 2025-12-10 13:04:18,579 | INFO     | task id: 47556161
[2025-12-10 05:05:20] 2025-12-10 13:04:18,580 | INFO     | errors: (none)
[2025-12-10 05:05:20] 2025-12-10 13:04:18,580 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-10 05:05:20] 2025-12-10 13:04:18,580 | INFO     | pilot state: finished 
[2025-12-10 05:05:20] 2025-12-10 13:04:18,580 | INFO     | transexitcode: 0
[2025-12-10 05:05:20] 2025-12-10 13:04:18,580 | INFO     | exeerrorcode: 0
[2025-12-10 05:05:20] 2025-12-10 13:04:18,580 | INFO     | exeerrordiag: 
[2025-12-10 05:05:20] 2025-12-10 13:04:18,580 | INFO     | exitcode: 0
[2025-12-10 05:05:20] 2025-12-10 13:04:18,580 | INFO     | exitmsg: OK
[2025-12-10 05:05:20] 2025-12-10 13:04:18,580 | INFO     | cpuconsumptiontime: 137444 s
[2025-12-10 05:05:20] 2025-12-10 13:04:18,580 | INFO     | nevents: 1000
[2025-12-10 05:05:20] 2025-12-10 13:04:18,580 | INFO     | neventsw: 0
[2025-12-10 05:05:20] 2025-12-10 13:04:18,580 | INFO     | pid: 2210323
[2025-12-10 05:05:20] 2025-12-10 13:04:18,580 | INFO     | pgrp: 2210323
[2025-12-10 05:05:20] 2025-12-10 13:04:18,580 | INFO     | corecount: 10
[2025-12-10 05:05:20] 2025-12-10 13:04:18,580 | INFO     | event service: False
[2025-12-10 05:05:20] 2025-12-10 13:04:18,580 | INFO     | sizes: {0: 2284313, 1: 2284512, 6: 2284774, 11: 2284802, 63561: 2339366, 63565: 2348388, 63566: 2348572, 63572: 2348818}
[2025-12-10 05:05:20] 2025-12-10 13:04:18,580 | INFO     | --------------------------------------------------
[2025-12-10 05:05:20] 2025-12-10 13:04:18,580 | INFO     | 
[2025-12-10 05:05:20] 2025-12-10 13:04:18,580 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc543/slots/1
[2025-12-10 05:05:20] 2025-12-10 13:04:18,600 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-10 05:05:20] 2025-12-10 13:04:18,600 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-10 05:05:20] 2025-12-10 13:04:18,600 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-10 05:05:20] 2025-12-10 13:04:18,600 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-10 05:05:20] 2025-12-10 13:04:18,600 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-10 05:05:20] 2025-12-10 13:04:18,600 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-10 05:05:20] 2025-12-10 13:04:18,600 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-10 05:05:20] 2025-12-10 13:04:18,600 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-10 05:05:20] 2025-12-10 13:04:18,600 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-10 05:05:20] 2025-12-10 13:04:18,600 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-10 05:05:20] 2025-12-10 13:04:18,600 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-10 05:05:20] 2025-12-10 13:04:18,600 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-10 05:05:20] 2025-12-10 13:04:18,600 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-10 05:05:20] 2025-12-10 13:04:18,600 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-10 05:05:20] 2025-12-10 13:04:18,600 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-10 05:05:20] 2025-12-10 13:04:18,600 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-10 05:05:20] 2025-12-10 13:04:18,600 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-10 05:05:20] 2025-12-10 13:04:18,600 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-10 05:05:20] 2025-12-10 13:04:18,600 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-10 05:05:20] 2025-12-10 13:04:18,600 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-10 05:05:20] 2025-12-10 13:04:18,601 | INFO     | job 6899010861 has completed (purged errors)
[2025-12-10 05:05:20] 2025-12-10 13:04:18,601 | INFO     | overall cleanup function is called
[2025-12-10 05:05:20] 2025-12-10 13:04:19,615 | INFO     | --- collectZombieJob: --- 10, [2210323]
[2025-12-10 05:05:20] 2025-12-10 13:04:19,615 | INFO     | zombie collector waiting for pid 2210323
[2025-12-10 05:05:20] 2025-12-10 13:04:19,615 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-10 05:05:20] 2025-12-10 13:04:19,615 | INFO     | collected zombie processes
[2025-12-10 05:05:20] 2025-12-10 13:04:19,615 | INFO     | will attempt to kill all subprocesses of pid=2210323
[2025-12-10 05:05:20] 2025-12-10 13:04:19,893 | INFO     | process IDs to be killed: [2210323] (in reverse order)
[2025-12-10 05:05:20] 2025-12-10 13:04:20,033 | WARNING  | found no corresponding commands to process id(s)
[2025-12-10 05:05:20] 2025-12-10 13:04:20,033 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-10 05:05:20] 2025-12-10 13:04:20,038 | INFO     | did not find any defunct processes belonging to 2210323
[2025-12-10 05:05:20] 2025-12-10 13:04:20,042 | INFO     | did not find any defunct processes belonging to 2210323
[2025-12-10 05:05:20] 2025-12-10 13:04:20,042 | INFO     | ready for new job
[2025-12-10 05:05:20] 2025-12-10 13:04:20,042 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-10 05:05:20] 2025-12-10 13:04:20,046 | INFO     | ***************************************
[2025-12-10 05:05:20] 2025-12-10 13:04:20,046 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-10 05:05:20] 2025-12-10 13:04:20,046 | INFO     | ***************************************
[2025-12-10 05:05:20] 2025-12-10 13:04:20,046 | INFO     | 
[2025-12-10 05:05:20] 2025-12-10 13:04:20,047 | INFO     | architecture information:
[2025-12-10 05:05:20] 2025-12-10 13:04:20,047 | INFO     | executing command: cat /etc/os-release
[2025-12-10 05:05:20] 2025-12-10 13:04:20,074 | INFO     | cat /etc/os-release:
[2025-12-10 05:05:20] NAME="CentOS Linux"
[2025-12-10 05:05:20] VERSION="7 (Core)"
[2025-12-10 05:05:20] ID="centos"
[2025-12-10 05:05:20] ID_LIKE="rhel fedora"
[2025-12-10 05:05:20] VERSION_ID="7"
[2025-12-10 05:05:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-10 05:05:20] ANSI_COLOR="0;31"
[2025-12-10 05:05:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-10 05:05:20] HOME_URL="https://www.centos.org/"
[2025-12-10 05:05:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-10 05:05:20] 
[2025-12-10 05:05:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-10 05:05:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-10 05:05:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-10 05:05:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-10 05:05:20] 
[2025-12-10 05:05:20] 2025-12-10 13:04:20,074 | INFO     | ***************************************
[2025-12-10 05:05:20] 2025-12-10 13:04:20,576 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc543/slots/1
[2025-12-10 05:05:20] 2025-12-10 13:04:20,589 | INFO     | sufficient remaining disk space (188233023488 B)
[2025-12-10 05:05:20] 2025-12-10 13:04:20,590 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-10 05:05:20] 2025-12-10 13:04:20,590 | INFO     | current server update state: UPDATING_FINAL
[2025-12-10 05:05:20] 2025-12-10 13:04:20,590 | INFO     | update_server=False
[2025-12-10 05:05:20] 2025-12-10 13:04:20,590 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-10 05:05:20] 2025-12-10 13:04:20,590 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-10 05:05:20] 2025-12-10 13:04:20,590 | INFO     | aborting loop
[2025-12-10 05:05:20] 2025-12-10 13:04:20,678 | INFO     | all payload control threads have been joined
[2025-12-10 05:05:20] 2025-12-10 13:04:21,244 | INFO     | all job control threads have been joined
[2025-12-10 05:05:20] 2025-12-10 13:04:21,244 | INFO     | all data control threads have been joined
[2025-12-10 05:05:20] 2025-12-10 13:04:21,595 | INFO     | [job] retrieve thread has finished
[2025-12-10 05:05:20] 2025-12-10 13:04:21,595 | INFO     | [job] job monitor thread has finished
[2025-12-10 05:05:20] 2025-12-10 13:04:21,683 | INFO     | [payload] control thread has finished
[2025-12-10 05:05:20] 2025-12-10 13:04:21,729 | INFO     | [payload] execute_payloads thread has finished
[2025-12-10 05:05:20] 2025-12-10 13:04:21,818 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-10 05:05:20] 2025-12-10 13:04:21,950 | INFO     | [data] copytool_in thread has finished
[2025-12-10 05:05:20] 2025-12-10 13:04:22,204 | INFO     | [job] validate thread has finished
[2025-12-10 05:05:20] 2025-12-10 13:04:22,249 | INFO     | [data] control thread has finished
[2025-12-10 05:05:20] 2025-12-10 13:04:22,249 | INFO     | [job] control thread has finished
[2025-12-10 05:05:20] 2025-12-10 13:04:22,603 | INFO     | [payload] failed_post thread has finished
[2025-12-10 05:05:20] 2025-12-10 13:04:22,709 | INFO     | [payload] validate_post thread has finished
[2025-12-10 05:05:20] 2025-12-10 13:04:22,835 | INFO     | [payload] validate_pre thread has finished
[2025-12-10 05:05:20] 2025-12-10 13:04:23,032 | INFO     | [job] create_data_payload thread has finished
[2025-12-10 05:05:20] 2025-12-10 13:04:23,324 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-10 05:05:20] 2025-12-10 13:04:23,589 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-10 05:05:20] 2025-12-10 13:04:23,823 | INFO     | [data] copytool_out thread has finished
[2025-12-10 05:05:20] 2025-12-10 13:04:24,594 | INFO     | [job] queue monitor thread has finished
[2025-12-10 05:05:20] 2025-12-10 13:04:27,331 | INFO     | [data] queue_monitor thread has finished
[2025-12-10 05:05:20] 2025-12-10 13:04:30,755 | INFO     | job.realtimelogging is not enabled
[2025-12-10 05:05:20] 2025-12-10 13:04:31,760 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-10 05:05:20] 2025-12-10 13:04:49,994 | INFO     | PID=2203626 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-10 05:05:20] 2025-12-10 13:04:49,995 | INFO     | .. there are 11 such processes running
[2025-12-10 05:05:20] 2025-12-10 13:04:49,995 | INFO     | found 0 job(s) in 20 queues
[2025-12-10 05:05:20] 2025-12-10 13:04:49,995 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-10 05:05:20] 2025-12-10 13:04:49,995 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-10 05:05:20] 2025-12-10 13:05:15,494 | INFO     | [monitor] cgroup control has ended
[2025-12-10 05:05:20] 2025-12-10 13:05:15,548 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140067493201728)>', '<ExcThread(monitor, started 140066827511552)>']
[2025-12-10 05:05:20] 2025-12-10 13:05:16,128 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-10 05:05:20] 2025-12-10 13:05:16,128 | INFO     | [monitor] control thread has ended
[2025-12-10 05:05:20] 2025-12-10 13:05:20,573 | INFO     | all workflow threads have been joined
[2025-12-10 05:05:20] 2025-12-10 13:05:20,573 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-10 05:05:20] 2025-12-10 13:05:20,573 | INFO     | traces error code: 0
[2025-12-10 05:05:20] 2025-12-10 13:05:20,573 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-10 05:05:20] 2025-12-10 13:05:20,665 [wrapper] ==== pilot stdout END ====
[2025-12-10 05:05:20] 2025-12-10 13:05:20,667 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-10 05:05:20] 2025-12-10 13:05:20,668 [wrapper] pilotpid: 2203626
[2025-12-10 05:05:20] 2025-12-10 13:05:20,680 [wrapper] Pilot exit status: 0
[2025-12-10 05:05:20] 2025-12-10 13:05:20,692 [wrapper] pandaids: 6899010861
[2025-12-10 05:05:20] 2025-12-10 13:05:20,742 [wrapper] cleanup supervisor_pilot 3758598 2203627
[2025-12-10 05:05:20] 2025-12-10 13:05:20,744 [wrapper] Test setup, not cleaning
[2025-12-10 05:05:20] 2025-12-10 13:05:20,745 [wrapper] apfmon messages muted
[2025-12-10 05:05:20] 2025-12-10 13:05:20,747 [wrapper] ==== wrapper stdout END ====
[2025-12-10 05:05:20] 2025-12-10 13:05:20,749 [wrapper] ==== wrapper stderr END ====
[2025-12-10 05:05:20]  *** Error codes and diagnostics ***
[2025-12-10 05:05:20]     "exeErrorCode": 0,
[2025-12-10 05:05:20]     "exeErrorDiag": "",
[2025-12-10 05:05:20]     "pilotErrorCode": 0,
[2025-12-10 05:05:20]     "pilotErrorDiag": "",
[2025-12-10 05:05:20]  *** Listing of results directory ***
[2025-12-10 05:05:20] total 1320716
[2025-12-10 05:05:20] -rw-r--r-- 1 root root    579449 Dec  7 06:46 pilot3.tar.gz
[2025-12-10 05:05:20] -rwx------ 1 4871 1028     36292 Dec  7 07:06 runpilot2-wrapper.sh
[2025-12-10 05:05:20] -rw-r--r-- 1 root root      5112 Dec  7 07:06 queuedata.json
[2025-12-10 05:05:20] -rw-r--r-- 1 root root       100 Dec  9 11:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-10 05:05:20] -rwxr-xr-x 1 root root      7986 Dec  9 11:24 run_atlas
[2025-12-10 05:05:20] -rw-r--r-- 1 root root       105 Dec  9 11:24 job.xml
[2025-12-10 05:05:20] -rw-r--r-- 2 root root 407281696 Dec  9 11:24 EVNT.47483658._002785.pool.root.1
[2025-12-10 05:05:20] -rw-r--r-- 2 root root     15847 Dec  9 11:24 start_atlas.sh
[2025-12-10 05:05:20] drwxrwx--x 2 root root      4096 Dec  9 11:24 shared
[2025-12-10 05:05:20] -rw-r--r-- 2 root root    592576 Dec  9 11:24 input.tar.gz
[2025-12-10 05:05:20] -rw-r--r-- 1 root root         0 Dec  9 11:24 boinc_lockfile
[2025-12-10 05:05:20] -rw-r--r-- 1 root root      2788 Dec  9 11:24 pandaJob.out
[2025-12-10 05:05:20] -rw------- 1 root root    979017 Dec  9 11:24 agis_schedconf.cvmfs.json
[2025-12-10 05:05:20] drwxr-xr-x 5  320  320      4096 Dec  9 11:24 pilot3
[2025-12-10 05:05:20] -rw-r--r-- 1 root root      7074 Dec  9 19:14 init_data.xml
[2025-12-10 05:05:20] -rw-r--r-- 1 root root       533 Dec 10 04:55 boinc_task_state.xml
[2025-12-10 05:05:20] -rw------- 1 root root 918280659 Dec 10 05:03 HITS.47556161._007674.pool.root.1
[2025-12-10 05:05:20] -rw------- 1 root root      1054 Dec 10 05:04 memory_monitor_summary.json
[2025-12-10 05:05:20] -rw------- 1 root root   1516240 Dec 10 05:04 agis_ddmendpoints.agis.ALL.json
[2025-12-10 05:05:20] -rw------- 1 root root   2405144 Dec 10 05:04 log.47556161._007674.job.log.tgz.1
[2025-12-10 05:05:20] -rw------- 1 root root      8600 Dec 10 05:04 heartbeat.json
[2025-12-10 05:05:20] -rw------- 1 root root        95 Dec 10 05:04 pilot_heartbeat.json
[2025-12-10 05:05:20] -rw-r--r-- 1 root root      8192 Dec 10 05:05 boinc_mmap_file
[2025-12-10 05:05:20] -rw-r--r-- 1 root root        29 Dec 10 05:05 wrapper_checkpoint.txt
[2025-12-10 05:05:20] -rw------- 1 root root      4911 Dec 10 05:05 pilotlog.txt
[2025-12-10 05:05:20] -rw------- 1 root root   9061295 Dec 10 05:05 log.47556161._007674.job.log.1
[2025-12-10 05:05:20] -rw------- 1 root root       353 Dec 10 05:05 output.list
[2025-12-10 05:05:20] -rw-r--r-- 1 root root       620 Dec 10 05:05 runtime_log
[2025-12-10 05:05:20] -rw------- 1 root root  11489280 Dec 10 05:05 result.tar.gz
[2025-12-10 05:05:20] -rw------- 1 root root       662 Dec 10 05:05 Y5YNDmgWVm8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmMBQKDmoDM9Zn.diag
[2025-12-10 05:05:20] -rw-r--r-- 1 root root      9021 Dec 10 05:05 runtime_log.err
[2025-12-10 05:05:20] -rw-r--r-- 1 root root     21359 Dec 10 05:05 stderr.txt
[2025-12-10 05:05:20] HITS file was successfully produced:
[2025-12-10 05:05:20] -rw------- 1 root root 918280659 Dec 10 05:03 shared/HITS.pool.root.1
[2025-12-10 05:05:20]  *** Contents of shared directory: ***
[2025-12-10 05:05:20] total 1306324
[2025-12-10 05:05:20] -rw-r--r-- 2 root root 407281696 Dec  9 11:24 ATLAS.root_0
[2025-12-10 05:05:20] -rw-r--r-- 2 root root     15847 Dec  9 11:24 start_atlas.sh
[2025-12-10 05:05:20] -rw-r--r-- 2 root root    592576 Dec  9 11:24 input.tar.gz
[2025-12-10 05:05:20] -rw------- 1 root root 918280659 Dec 10 05:03 HITS.pool.root.1
[2025-12-10 05:05:20] -rw------- 1 root root  11489280 Dec 10 05:05 result.tar.gz
05:05:21 (2199765): run_atlas exited; CPU time 137554.889530
05:05:21 (2199765): called boinc_finish(0)

</stderr_txt>
]]>

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