Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:09:50 (5309): wrapper (7.7.26015): starting
15:09:50 (5309): wrapper: running run_atlas (--nthreads 12)
[2025-12-06 15:09:50] Arguments: --nthreads 12
[2025-12-06 15:09:50] Threads: 12
[2025-12-06 15:09:50] Checking for CVMFS
[2025-12-06 15:09:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-06 15:09:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-06 15:09:50] Running cvmfs_config stat atlas.cern.ch
[2025-12-06 15:09:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-06 15:09:50] 2.11.2.0 2998 118256 103440 153701 2 1 11598211 20275200 1 130560 0 50522680 99.957 5213148 36298 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-06 15:09:50] CVMFS is ok
[2025-12-06 15:09:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-06 15:09:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-06 15:09:50] Further information can be found at the LHC@home message board.
[2025-12-06 15:09:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-06 15:09:50] Checking for apptainer binary...
[2025-12-06 15:09:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-06 15:09:50] Running /usr/bin/apptainer --version
[2025-12-06 15:09:51] apptainer version 1.3.2-1.el7
[2025-12-06 15:09:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-06 15:09:52] c-205-12.aglt2.org
[2025-12-06 15:09:52] apptainer works
[2025-12-06 15:09:52] Set ATHENA_PROC_NUMBER=12
[2025-12-06 15:09:52] Set ATHENA_CORE_NUMBER=12
[2025-12-06 15:09:52] Starting ATLAS job with PandaID=6895328662
[2025-12-06 15:09:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-06 22:04:54]  *** The last 200 lines of the pilot log: ***
[2025-12-06 22:04:54] 2025-12-07 03:03:50,017 | INFO     | time since job start (24822s) is within the limit (172800.0s)
[2025-12-06 22:04:54] 2025-12-07 03:03:50,636 | INFO     | monitor loop #1850: job 0:6895328662 is in state 'finished'
[2025-12-06 22:04:54] 2025-12-07 03:03:50,636 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-06 22:04:54] 2025-12-07 03:03:51,574 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-06 22:04:54] 2025-12-07 03:03:51,576 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1795.6666666666667
[2025-12-06 22:04:54] 2025-12-07 03:03:51,578 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895328662/memory_monitor_summary.json (trf name=prmon)
[2025-12-06 22:04:54] 2025-12-07 03:03:51,579 | INFO     | extracted standard info from prmon json
[2025-12-06 22:04:54] 2025-12-07 03:03:51,579 | INFO     | extracted standard memory fields from prmon json
[2025-12-06 22:04:54] 2025-12-07 03:03:51,579 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-06 22:04:54] 2025-12-07 03:03:51,586 | INFO     | fitting pss+swap vs Time
[2025-12-06 22:04:54] 2025-12-07 03:03:51,586 | INFO     | sum of square deviations: 20905497731.233387
[2025-12-06 22:04:54] 2025-12-07 03:03:51,590 | INFO     | sum of deviations: 353457417814.87683
[2025-12-06 22:04:54] 2025-12-07 03:03:51,590 | INFO     | mean x: 1765064221.3734643
[2025-12-06 22:04:54] 2025-12-07 03:03:51,590 | INFO     | mean y: 3954889.8034398034
[2025-12-06 22:04:54] 2025-12-07 03:03:51,590 | INFO     | intersect: -29838675502.679607
[2025-12-06 22:04:54] 2025-12-07 03:03:51,591 | INFO     | chi2: 7.2212749472347575
[2025-12-06 22:04:54] 2025-12-07 03:03:51,591 | INFO     | sum of square deviations: 20144497263.027508
[2025-12-06 22:04:54] 2025-12-07 03:03:51,594 | INFO     | sum of deviations: 567665909852.4503
[2025-12-06 22:04:54] 2025-12-07 03:03:51,595 | INFO     | mean x: 1765064068.8781095
[2025-12-06 22:04:54] 2025-12-07 03:03:51,595 | INFO     | mean y: 3997822.539800995
[2025-12-06 22:04:54] 2025-12-07 03:03:51,595 | INFO     | intersect: -49734979900.49993
[2025-12-06 22:04:54] 2025-12-07 03:03:51,595 | INFO     | chi2: 3.177181764605491
[2025-12-06 22:04:54] 2025-12-07 03:03:51,595 | INFO     | current chi2=3.177181764605491 (change=56.00248172489085 %)
[2025-12-06 22:04:54] 2025-12-07 03:03:51,596 | INFO     | sum of square deviations: 19402194819.803642
[2025-12-06 22:04:54] 2025-12-07 03:03:51,599 | INFO     | sum of deviations: 617670846551.4935
[2025-12-06 22:04:54] 2025-12-07 03:03:51,599 | INFO     | mean x: 1765063916.3828716
[2025-12-06 22:04:54] 2025-12-07 03:03:51,600 | INFO     | mean y: 4008045.6020151135
[2025-12-06 22:04:54] 2025-12-07 03:03:51,600 | INFO     | intersect: -56186981354.05687
[2025-12-06 22:04:54] 2025-12-07 03:03:51,600 | INFO     | chi2: 2.7382566526524803
[2025-12-06 22:04:54] 2025-12-07 03:03:51,600 | INFO     | current chi2=2.7382566526524803 (change=13.814919777103524 %)
[2025-12-06 22:04:54] 2025-12-07 03:03:51,600 | INFO     | right removable region: 396
[2025-12-06 22:04:54] 2025-12-07 03:03:51,601 | INFO     | sum of square deviations: 20144404543.027493
[2025-12-06 22:04:54] 2025-12-07 03:03:51,604 | INFO     | sum of deviations: 189829207520.78583
[2025-12-06 22:04:54] 2025-12-07 03:03:51,604 | INFO     | mean x: 1765064373.8781095
[2025-12-06 22:04:54] 2025-12-07 03:03:51,605 | INFO     | mean y: 3987581.771144279
[2025-12-06 22:04:54] 2025-12-07 03:03:51,605 | INFO     | intersect: -16628957343.494808
[2025-12-06 22:04:54] 2025-12-07 03:03:51,605 | INFO     | chi2: 4.700225397446382
[2025-12-06 22:04:54] 2025-12-07 03:03:51,605 | INFO     | current chi2=4.700225397446382 (change=34.91141894207699 %)
[2025-12-06 22:04:54] 2025-12-07 03:03:51,606 | INFO     | sum of square deviations: 19402009379.803642
[2025-12-06 22:04:54] 2025-12-07 03:03:51,609 | INFO     | sum of deviations: 149493554883.79123
[2025-12-06 22:04:54] 2025-12-07 03:03:51,609 | INFO     | mean x: 1765064526.3828716
[2025-12-06 22:04:54] 2025-12-07 03:03:51,609 | INFO     | mean y: 3995862.5869017635
[2025-12-06 22:04:54] 2025-12-07 03:03:51,610 | INFO     | intersect: -13595923892.266924
[2025-12-06 22:04:54] 2025-12-07 03:03:51,610 | INFO     | chi2: 4.624903644858463
[2025-12-06 22:04:54] 2025-12-07 03:03:51,610 | INFO     | current chi2=4.624903644858463 (change=1.6025136290025777 %)
[2025-12-06 22:04:54] 2025-12-07 03:03:51,610 | INFO     | left removable region: 20
[2025-12-06 22:04:54] 2025-12-07 03:03:51,611 | INFO     | sum of square deviations: 16483135219.744724
[2025-12-06 22:04:54] 2025-12-07 03:03:51,614 | INFO     | sum of deviations: 355474136349.57446
[2025-12-06 22:04:54] 2025-12-07 03:03:51,614 | INFO     | mean x: 1765064495.893617
[2025-12-06 22:04:54] 2025-12-07 03:03:51,614 | INFO     | mean y: 4063238.989361702
[2025-12-06 22:04:54] 2025-12-07 03:03:51,614 | INFO     | intersect: -38061193698.749794
[2025-12-06 22:04:54] 2025-12-07 03:03:51,615 | INFO     | chi2: 0.039685198921516215
[2025-12-06 22:04:54] 2025-12-07 03:03:51,615 | INFO     | current memory leak: 21.57 B/s (using 376 data points, chi2=0.04)
[2025-12-06 22:04:54] 2025-12-07 03:03:51,615 | INFO     | could have reported an average CPU frequency of 2391 MHz (17 samples)
[2025-12-06 22:04:54] 2025-12-07 03:03:51,616 | INFO     | ..............................
[2025-12-06 22:04:54] 2025-12-07 03:03:51,616 | INFO     | . Timing measurements:
[2025-12-06 22:04:54] 2025-12-07 03:03:51,616 | INFO     | . get job = 0 s
[2025-12-06 22:04:54] 2025-12-07 03:03:51,616 | INFO     | . initial setup = 2 s
[2025-12-06 22:04:54] 2025-12-07 03:03:51,616 | INFO     | . payload setup = 8 s
[2025-12-06 22:04:54] 2025-12-07 03:03:51,616 | INFO     | . stage-in = 0 s
[2025-12-06 22:04:54] 2025-12-07 03:03:51,616 | INFO     | . payload execution = 24782 s
[2025-12-06 22:04:54] 2025-12-07 03:03:51,616 | INFO     | . stage-out = 3 s
[2025-12-06 22:04:54] 2025-12-07 03:03:51,616 | INFO     | . log creation = 0 s
[2025-12-06 22:04:54] 2025-12-07 03:03:51,617 | INFO     | ..............................
[2025-12-06 22:04:54] 2025-12-07 03:03:51,989 | INFO     | 
[2025-12-06 22:04:54] 2025-12-07 03:03:51,990 | INFO     | job summary report
[2025-12-06 22:04:54] 2025-12-07 03:03:51,990 | INFO     | --------------------------------------------------
[2025-12-06 22:04:54] 2025-12-07 03:03:51,990 | INFO     | PanDA job id: 6895328662
[2025-12-06 22:04:54] 2025-12-07 03:03:51,990 | INFO     | task id: 47556149
[2025-12-06 22:04:54] 2025-12-07 03:03:51,990 | INFO     | errors: (none)
[2025-12-06 22:04:54] 2025-12-07 03:03:51,990 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-06 22:04:54] 2025-12-07 03:03:51,991 | INFO     | pilot state: finished 
[2025-12-06 22:04:54] 2025-12-07 03:03:51,991 | INFO     | transexitcode: 0
[2025-12-06 22:04:54] 2025-12-07 03:03:51,991 | INFO     | exeerrorcode: 0
[2025-12-06 22:04:54] 2025-12-07 03:03:51,991 | INFO     | exeerrordiag: 
[2025-12-06 22:04:54] 2025-12-07 03:03:51,991 | INFO     | exitcode: 0
[2025-12-06 22:04:54] 2025-12-07 03:03:51,991 | INFO     | exitmsg: OK
[2025-12-06 22:04:54] 2025-12-07 03:03:51,991 | INFO     | cpuconsumptiontime: 287473 s
[2025-12-06 22:04:54] 2025-12-07 03:03:51,992 | INFO     | nevents: 1000
[2025-12-06 22:04:54] 2025-12-07 03:03:51,992 | INFO     | neventsw: 0
[2025-12-06 22:04:54] 2025-12-07 03:03:51,992 | INFO     | pid: 16388
[2025-12-06 22:04:54] 2025-12-07 03:03:51,992 | INFO     | pgrp: 16388
[2025-12-06 22:04:54] 2025-12-07 03:03:51,992 | INFO     | corecount: 12
[2025-12-06 22:04:54] 2025-12-07 03:03:51,992 | INFO     | event service: False
[2025-12-06 22:04:54] 2025-12-07 03:03:51,993 | INFO     | sizes: {0: 2283434, 1: 2284290, 6: 2284552, 12: 2284580, 24793: 2320985, 24794: 2320984, 24798: 2330162, 24801: 2330598, 24807: 2330908}
[2025-12-06 22:04:54] 2025-12-07 03:03:51,993 | INFO     | --------------------------------------------------
[2025-12-06 22:04:54] 2025-12-07 03:03:51,993 | INFO     | 
[2025-12-06 22:04:54] 2025-12-07 03:03:51,993 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-06 22:04:54] 2025-12-07 03:03:52,018 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-06 22:04:54] 2025-12-07 03:03:52,019 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-06 22:04:54] 2025-12-07 03:03:52,019 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-06 22:04:54] 2025-12-07 03:03:52,019 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-06 22:04:54] 2025-12-07 03:03:52,019 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-06 22:04:54] 2025-12-07 03:03:52,019 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-06 22:04:54] 2025-12-07 03:03:52,020 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-06 22:04:54] 2025-12-07 03:03:52,020 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-06 22:04:54] 2025-12-07 03:03:52,020 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-06 22:04:54] 2025-12-07 03:03:52,020 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-06 22:04:54] 2025-12-07 03:03:52,020 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-06 22:04:54] 2025-12-07 03:03:52,020 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-06 22:04:54] 2025-12-07 03:03:52,021 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-06 22:04:54] 2025-12-07 03:03:52,021 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-06 22:04:54] 2025-12-07 03:03:52,021 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-06 22:04:54] 2025-12-07 03:03:52,021 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-06 22:04:54] 2025-12-07 03:03:52,021 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-06 22:04:54] 2025-12-07 03:03:52,021 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-06 22:04:54] 2025-12-07 03:03:52,021 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-06 22:04:54] 2025-12-07 03:03:52,022 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-06 22:04:54] 2025-12-07 03:03:52,022 | INFO     | job 6895328662 has completed (purged errors)
[2025-12-06 22:04:54] 2025-12-07 03:03:52,022 | INFO     | overall cleanup function is called
[2025-12-06 22:04:54] 2025-12-07 03:03:53,039 | INFO     | --- collectZombieJob: --- 10, [16388]
[2025-12-06 22:04:54] 2025-12-07 03:03:53,039 | INFO     | zombie collector waiting for pid 16388
[2025-12-06 22:04:54] 2025-12-07 03:03:53,045 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-06 22:04:54] 2025-12-07 03:03:53,045 | INFO     | collected zombie processes
[2025-12-06 22:04:54] 2025-12-07 03:03:53,045 | INFO     | will attempt to kill all subprocesses of pid=16388
[2025-12-06 22:04:54] 2025-12-07 03:03:53,136 | INFO     | process IDs to be killed: [16388] (in reverse order)
[2025-12-06 22:04:54] 2025-12-07 03:03:53,200 | WARNING  | found no corresponding commands to process id(s)
[2025-12-06 22:04:54] 2025-12-07 03:03:53,200 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-06 22:04:54] 2025-12-07 03:03:53,202 | INFO     | did not find any defunct processes belonging to 16388
[2025-12-06 22:04:54] 2025-12-07 03:03:53,205 | INFO     | did not find any defunct processes belonging to 16388
[2025-12-06 22:04:54] 2025-12-07 03:03:53,207 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-06 22:04:54] 2025-12-07 03:03:53,207 | INFO     | ready for new job
[2025-12-06 22:04:54] 2025-12-07 03:03:53,207 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-06 22:04:54] 2025-12-07 03:03:53,209 | INFO     | ***************************************
[2025-12-06 22:04:54] 2025-12-07 03:03:53,209 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-06 22:04:54] 2025-12-07 03:03:53,209 | INFO     | ***************************************
[2025-12-06 22:04:54] 2025-12-07 03:03:53,209 | INFO     | 
[2025-12-06 22:04:54] 2025-12-07 03:03:53,210 | INFO     | architecture information:
[2025-12-06 22:04:54] 2025-12-07 03:03:53,211 | INFO     | executing command: cat /etc/os-release
[2025-12-06 22:04:54] 2025-12-07 03:03:53,227 | INFO     | cat /etc/os-release:
[2025-12-06 22:04:54] NAME="CentOS Linux"
[2025-12-06 22:04:54] VERSION="7 (Core)"
[2025-12-06 22:04:54] ID="centos"
[2025-12-06 22:04:54] ID_LIKE="rhel fedora"
[2025-12-06 22:04:54] VERSION_ID="7"
[2025-12-06 22:04:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-06 22:04:54] ANSI_COLOR="0;31"
[2025-12-06 22:04:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-06 22:04:54] HOME_URL="https://www.centos.org/"
[2025-12-06 22:04:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-06 22:04:54] 
[2025-12-06 22:04:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-06 22:04:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-06 22:04:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-06 22:04:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-06 22:04:54] 
[2025-12-06 22:04:54] 2025-12-07 03:03:53,227 | INFO     | ***************************************
[2025-12-06 22:04:54] 2025-12-07 03:03:53,730 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-06 22:04:54] 2025-12-07 03:03:53,747 | INFO     | sufficient remaining disk space (28240248832 B)
[2025-12-06 22:04:54] 2025-12-07 03:03:53,748 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-06 22:04:54] 2025-12-07 03:03:53,748 | INFO     | current server update state: UPDATING_FINAL
[2025-12-06 22:04:54] 2025-12-07 03:03:53,748 | INFO     | update_server=False
[2025-12-06 22:04:54] 2025-12-07 03:03:53,748 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-06 22:04:54] 2025-12-07 03:03:53,749 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-06 22:04:54] 2025-12-07 03:03:53,839 | INFO     | all job control threads have been joined
[2025-12-06 22:04:54] 2025-12-07 03:03:54,149 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-06 22:04:54] 2025-12-07 03:03:54,150 | INFO     | aborting loop
[2025-12-06 22:04:54] 2025-12-07 03:03:54,365 | INFO     | all data control threads have been joined
[2025-12-06 22:04:54] 2025-12-07 03:03:54,752 | INFO     | [job] retrieve thread has finished
[2025-12-06 22:04:54] 2025-12-07 03:03:54,845 | INFO     | [job] control thread has finished
[2025-12-06 22:04:54] 2025-12-07 03:03:54,926 | INFO     | [payload] failed_post thread has finished
[2025-12-06 22:04:54] 2025-12-07 03:03:54,987 | INFO     | all payload control threads have been joined
[2025-12-06 22:04:54] 2025-12-07 03:03:55,155 | INFO     | [job] job monitor thread has finished
[2025-12-06 22:04:54] 2025-12-07 03:03:55,160 | INFO     | [job] create_data_payload thread has finished
[2025-12-06 22:04:54] 2025-12-07 03:03:55,371 | INFO     | [data] control thread has finished
[2025-12-06 22:04:54] 2025-12-07 03:03:55,439 | INFO     | [data] copytool_in thread has finished
[2025-12-06 22:04:54] 2025-12-07 03:03:55,626 | INFO     | [payload] execute_payloads thread has finished
[2025-12-06 22:04:54] 2025-12-07 03:03:55,702 | INFO     | [payload] validate_post thread has finished
[2025-12-06 22:04:54] 2025-12-07 03:03:55,754 | INFO     | [data] copytool_out thread has finished
[2025-12-06 22:04:54] 2025-12-07 03:03:55,991 | INFO     | [payload] control thread has finished
[2025-12-06 22:04:54] 2025-12-07 03:03:56,097 | INFO     | [job] validate thread has finished
[2025-12-06 22:04:54] 2025-12-07 03:03:56,198 | INFO     | [payload] validate_pre thread has finished
[2025-12-06 22:04:54] 2025-12-07 03:03:56,546 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-06 22:04:54] 2025-12-07 03:03:56,712 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-06 22:04:54] 2025-12-07 03:03:57,718 | INFO     | [job] queue monitor thread has finished
[2025-12-06 22:04:54] 2025-12-07 03:04:00,552 | INFO     | [data] queue_monitor thread has finished
[2025-12-06 22:04:54] 2025-12-07 03:04:03,990 | INFO     | job.realtimelogging is not enabled
[2025-12-06 22:04:54] 2025-12-07 03:04:04,995 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-06 22:04:54] 2025-12-07 03:04:23,205 | INFO     | PID=9892 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-06 22:04:54] 2025-12-07 03:04:23,205 | INFO     | found 0 job(s) in 20 queues
[2025-12-06 22:04:54] 2025-12-07 03:04:23,205 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-06 22:04:54] 2025-12-07 03:04:23,206 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-06 22:04:54] 2025-12-07 03:04:48,863 | INFO     | [monitor] cgroup control has ended
[2025-12-06 22:04:54] 2025-12-07 03:04:49,608 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139911652591424)>', '<ExcThread(monitor, started 139910774257408)>']
[2025-12-06 22:04:54] 2025-12-07 03:04:50,332 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-06 22:04:54] 2025-12-07 03:04:50,333 | INFO     | [monitor] control thread has ended
[2025-12-06 22:04:54] 2025-12-07 03:04:54,618 | INFO     | all workflow threads have been joined
[2025-12-06 22:04:54] 2025-12-07 03:04:54,618 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-06 22:04:54] 2025-12-07 03:04:54,618 | INFO     | traces error code: 0
[2025-12-06 22:04:54] 2025-12-07 03:04:54,618 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-06 22:04:54] 2025-12-07 03:04:54,704 [wrapper] ==== pilot stdout END ====
[2025-12-06 22:04:54] 2025-12-07 03:04:54,708 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-06 22:04:54] 2025-12-07 03:04:54,712 [wrapper] pilotpid: 9892
[2025-12-06 22:04:54] 2025-12-07 03:04:54,717 [wrapper] Pilot exit status: 0
[2025-12-06 22:04:54] 2025-12-07 03:04:54,732 [wrapper] pandaids: 6895328662
[2025-12-06 22:04:54] 2025-12-07 03:04:54,777 [wrapper] cleanup supervisor_pilot  8260 9893
[2025-12-06 22:04:54] 2025-12-07 03:04:54,781 [wrapper] Test setup, not cleaning
[2025-12-06 22:04:54] 2025-12-07 03:04:54,785 [wrapper] apfmon messages muted
[2025-12-06 22:04:54] 2025-12-07 03:04:54,789 [wrapper] ==== wrapper stdout END ====
[2025-12-06 22:04:54] 2025-12-07 03:04:54,793 [wrapper] ==== wrapper stderr END ====
[2025-12-06 22:04:54]  *** Error codes and diagnostics ***
[2025-12-06 22:04:54]     "exeErrorCode": 0,
[2025-12-06 22:04:54]     "exeErrorDiag": "",
[2025-12-06 22:04:54]     "pilotErrorCode": 0,
[2025-12-06 22:04:54]     "pilotErrorDiag": "",
[2025-12-06 22:04:54]  *** Listing of results directory ***
[2025-12-06 22:04:54] total 1318040
[2025-12-06 22:04:54] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 12:05 pilot3.tar.gz
[2025-12-06 22:04:54] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 12:40 queuedata.json
[2025-12-06 22:04:54] -rwx------ 1 boincer umatlas     36292 Nov 21 12:41 runpilot2-wrapper.sh
[2025-12-06 22:04:54] -rw-r--r-- 1 boincer umatlas       100 Dec  6 15:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-06 22:04:54] -rwxr-xr-x 1 boincer umatlas      7986 Dec  6 15:09 run_atlas
[2025-12-06 22:04:54] -rw-r--r-- 1 boincer umatlas       105 Dec  6 15:09 job.xml
[2025-12-06 22:04:54] -rw-r--r-- 2 boincer umatlas 410801395 Dec  6 15:09 EVNT.47483658._001031.pool.root.1
[2025-12-06 22:04:54] -rw-r--r-- 2 boincer umatlas     15847 Dec  6 15:09 start_atlas.sh
[2025-12-06 22:04:54] drwxrwx--x 2 boincer umatlas      4096 Dec  6 15:09 shared
[2025-12-06 22:04:54] -rw-r--r-- 2 boincer umatlas    590102 Dec  6 15:09 input.tar.gz
[2025-12-06 22:04:54] -rw-r--r-- 1 boincer umatlas         0 Dec  6 15:09 boinc_lockfile
[2025-12-06 22:04:54] -rw-r--r-- 1 boincer umatlas      2784 Dec  6 15:09 pandaJob.out
[2025-12-06 22:04:54] -rw------- 1 boincer umatlas        57 Dec  6 15:09 setup.sh.local
[2025-12-06 22:04:54] -rw------- 1 boincer umatlas    985902 Dec  6 15:10 agis_schedconf.cvmfs.json
[2025-12-06 22:04:54] drwx------ 5 boincer umatlas      4096 Dec  6 15:10 pilot3
[2025-12-06 22:04:54] -rw-r--r-- 1 boincer umatlas       532 Dec  6 21:54 boinc_task_state.xml
[2025-12-06 22:04:54] -rw-r--r-- 1 boincer umatlas      5955 Dec  6 22:00 init_data.xml
[2025-12-06 22:04:54] -rw------- 1 boincer umatlas 923630034 Dec  6 22:03 HITS.47556149._000172.pool.root.1
[2025-12-06 22:04:54] -rw------- 1 boincer umatlas        95 Dec  6 22:03 pilot_heartbeat.json
[2025-12-06 22:04:54] -rw------- 1 boincer umatlas      1061 Dec  6 22:03 memory_monitor_summary.json
[2025-12-06 22:04:54] -rw------- 1 boincer umatlas   1516240 Dec  6 22:03 agis_ddmendpoints.agis.ALL.json
[2025-12-06 22:04:54] -rw------- 1 boincer umatlas   2178294 Dec  6 22:03 log.47556149._000172.job.log.tgz.1
[2025-12-06 22:04:54] -rw------- 1 boincer umatlas      8663 Dec  6 22:03 heartbeat.json
[2025-12-06 22:04:54] -rw-r--r-- 1 boincer umatlas      8192 Dec  6 22:04 boinc_mmap_file
[2025-12-06 22:04:54] -rw-r--r-- 1 boincer umatlas        29 Dec  6 22:04 wrapper_checkpoint.txt
[2025-12-06 22:04:54] -rw------- 1 boincer umatlas      4817 Dec  6 22:04 pilotlog.txt
[2025-12-06 22:04:54] -rw------- 1 boincer umatlas   3483138 Dec  6 22:04 log.47556149._000172.job.log.1
[2025-12-06 22:04:54] -rw------- 1 boincer umatlas       353 Dec  6 22:04 output.list
[2025-12-06 22:04:54] -rw-r--r-- 1 boincer umatlas       620 Dec  6 22:04 runtime_log
[2025-12-06 22:04:54] -rw------- 1 boincer umatlas   5683200 Dec  6 22:04 result.tar.gz
[2025-12-06 22:04:54] -rw-r--r-- 1 boincer umatlas      9345 Dec  6 22:04 runtime_log.err
[2025-12-06 22:04:54] -rw------- 1 boincer umatlas       669 Dec  6 22:04 Bb4KDmnJkg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmikHKDmKDzLAo.diag
[2025-12-06 22:04:54] -rw-r--r-- 1 boincer umatlas     21326 Dec  6 22:04 stderr.txt
[2025-12-06 22:04:54] HITS file was successfully produced:
[2025-12-06 22:04:54] -rw------- 1 boincer umatlas 923630034 Dec  6 22:03 shared/HITS.pool.root.1
[2025-12-06 22:04:54]  *** Contents of shared directory: ***
[2025-12-06 22:04:54] total 1309316
[2025-12-06 22:04:54] -rw-r--r-- 2 boincer umatlas 410801395 Dec  6 15:09 ATLAS.root_0
[2025-12-06 22:04:54] -rw-r--r-- 2 boincer umatlas     15847 Dec  6 15:09 start_atlas.sh
[2025-12-06 22:04:54] -rw-r--r-- 2 boincer umatlas    590102 Dec  6 15:09 input.tar.gz
[2025-12-06 22:04:54] -rw------- 1 boincer umatlas 923630034 Dec  6 22:03 HITS.pool.root.1
[2025-12-06 22:04:54] -rw------- 1 boincer umatlas   5683200 Dec  6 22:04 result.tar.gz
22:04:56 (5309): run_atlas exited; CPU time 284292.125223
22:04:56 (5309): called boinc_finish(0)

</stderr_txt>
]]>

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