Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:53:50 (30626): wrapper (7.7.26015): starting
07:53:50 (30626): wrapper: running run_atlas (--nthreads 8)
[2025-12-06 07:53:50] Arguments: --nthreads 8
[2025-12-06 07:53:50] Threads: 8
[2025-12-06 07:53:50] Checking for CVMFS
[2025-12-06 07:53:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-06 07:53:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-06 07:53:50] Running cvmfs_config stat atlas.cern.ch
[2025-12-06 07:53:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-06 07:53:51] 2.11.2.0 2908 184286 94040 153690 1 1 13361495 20275201 1 130560 2 72788322 99.937 8748481 26342 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-06 07:53:51] CVMFS is ok
[2025-12-06 07:53:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-06 07:53:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-06 07:53:51] Further information can be found at the LHC@home message board.
[2025-12-06 07:53:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-06 07:53:51] Checking for apptainer binary...
[2025-12-06 07:53:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-06 07:53:51] Running /usr/bin/apptainer --version
[2025-12-06 07:53:51] apptainer version 1.3.2-1.el7
[2025-12-06 07:53:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-06 07:53:53] c-115-5.aglt2.org
[2025-12-06 07:53:53] apptainer works
[2025-12-06 07:53:53] Set ATHENA_PROC_NUMBER=8
[2025-12-06 07:53:53] Set ATHENA_CORE_NUMBER=8
[2025-12-06 07:53:53] Starting ATLAS job with PandaID=6905332266
[2025-12-06 07:53:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-06 17:40:15]  *** The last 200 lines of the pilot log: ***
[2025-12-06 17:40:15] 2025-12-06 22:39:34,594 | INFO     | monitor loop #2598: job 0:6905332266 is in state 'finished'
[2025-12-06 17:40:15] 2025-12-06 22:39:34,594 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-06 17:40:15] 2025-12-06 22:39:34,645 | INFO     | time since job start (35123s) is within the limit (172800.0s)
[2025-12-06 17:40:15] 2025-12-06 22:39:35,984 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-06 17:40:15] 2025-12-06 22:39:35,988 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-12-06 17:40:15] 2025-12-06 22:39:35,990 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6905332266/memory_monitor_summary.json (trf name=prmon)
[2025-12-06 17:40:15] 2025-12-06 22:39:35,992 | INFO     | extracted standard info from prmon json
[2025-12-06 17:40:15] 2025-12-06 22:39:35,992 | INFO     | extracted standard memory fields from prmon json
[2025-12-06 17:40:15] 2025-12-06 22:39:35,992 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-06 17:40:15] 2025-12-06 22:39:36,001 | INFO     | fitting pss+swap vs Time
[2025-12-06 17:40:15] 2025-12-06 22:39:36,001 | INFO     | sum of square deviations: 58950004618.13249
[2025-12-06 17:40:15] 2025-12-06 22:39:36,008 | INFO     | sum of deviations: 663837437354.727
[2025-12-06 17:40:15] 2025-12-06 22:39:36,008 | INFO     | mean x: 1765043196.5530434
[2025-12-06 17:40:15] 2025-12-06 22:39:36,008 | INFO     | mean y: 3611702.0417391304
[2025-12-06 17:40:15] 2025-12-06 22:39:36,008 | INFO     | intersect: -19872582710.668503
[2025-12-06 17:40:15] 2025-12-06 22:39:36,009 | INFO     | chi2: 4.945926583105884
[2025-12-06 17:40:15] 2025-12-06 22:39:36,009 | INFO     | sum of square deviations: 57425617209.08959
[2025-12-06 17:40:15] 2025-12-06 22:39:36,016 | INFO     | sum of deviations: 857085294394.6583
[2025-12-06 17:40:15] 2025-12-06 22:39:36,016 | INFO     | mean x: 1765043044.0578947
[2025-12-06 17:40:15] 2025-12-06 22:39:36,016 | INFO     | mean y: 3631001.464912281
[2025-12-06 17:40:15] 2025-12-06 22:39:36,016 | INFO     | intersect: -26339881015.610157
[2025-12-06 17:40:15] 2025-12-06 22:39:36,017 | INFO     | chi2: 2.658156884301399
[2025-12-06 17:40:15] 2025-12-06 22:39:36,017 | INFO     | current chi2=2.658156884301399 (change=46.25563401242075 %)
[2025-12-06 17:40:15] 2025-12-06 22:39:36,017 | INFO     | sum of square deviations: 55927672629.2638
[2025-12-06 17:40:15] 2025-12-06 22:39:36,023 | INFO     | sum of deviations: 858291047315.6428
[2025-12-06 17:40:15] 2025-12-06 22:39:36,024 | INFO     | mean x: 1765042891.559292
[2025-12-06 17:40:15] 2025-12-06 22:39:36,024 | INFO     | mean y: 3631113.90619469
[2025-12-06 17:40:15] 2025-12-06 22:39:36,024 | INFO     | intersect: -27083505552.688847
[2025-12-06 17:40:15] 2025-12-06 22:39:36,024 | INFO     | chi2: 2.6121685009074915
[2025-12-06 17:40:15] 2025-12-06 22:39:36,025 | INFO     | current chi2=2.6121685009074915 (change=1.7300853710142863 %)
[2025-12-06 17:40:15] 2025-12-06 22:39:36,025 | INFO     | right removable region: 564
[2025-12-06 17:40:15] 2025-12-06 22:39:36,025 | INFO     | sum of square deviations: 57425423229.089615
[2025-12-06 17:40:15] 2025-12-06 22:39:36,032 | INFO     | sum of deviations: 455008363958.2682
[2025-12-06 17:40:15] 2025-12-06 22:39:36,032 | INFO     | mean x: 1765043349.0578947
[2025-12-06 17:40:15] 2025-12-06 22:39:36,032 | INFO     | mean y: 3632549.507017544
[2025-12-06 17:40:15] 2025-12-06 22:39:36,032 | INFO     | intersect: -13981627661.225384
[2025-12-06 17:40:15] 2025-12-06 22:39:36,033 | INFO     | chi2: 2.4443674559307818
[2025-12-06 17:40:15] 2025-12-06 22:39:36,033 | INFO     | current chi2=2.4443674559307818 (change=50.57816943178729 %)
[2025-12-06 17:40:15] 2025-12-06 22:39:36,033 | INFO     | sum of square deviations: 55927388491.14261
[2025-12-06 17:40:15] 2025-12-06 22:39:36,039 | INFO     | sum of deviations: 419077049054.1159
[2025-12-06 17:40:15] 2025-12-06 22:39:36,040 | INFO     | mean x: 1765043501.5610619
[2025-12-06 17:40:15] 2025-12-06 22:39:36,040 | INFO     | mean y: 3636203.6053097346
[2025-12-06 17:40:15] 2025-12-06 22:39:36,040 | INFO     | intersect: -13222249038.712065
[2025-12-06 17:40:15] 2025-12-06 22:39:36,040 | INFO     | chi2: 2.415588017699303
[2025-12-06 17:40:15] 2025-12-06 22:39:36,041 | INFO     | current chi2=2.415588017699303 (change=1.1773777367903941 %)
[2025-12-06 17:40:15] 2025-12-06 22:39:36,041 | INFO     | left removable region: 20
[2025-12-06 17:40:15] 2025-12-06 22:39:36,041 | INFO     | sum of square deviations: 49920222433.34551
[2025-12-06 17:40:15] 2025-12-06 22:39:36,047 | INFO     | sum of deviations: 574695480995.0621
[2025-12-06 17:40:15] 2025-12-06 22:39:36,047 | INFO     | mean x: 1765043471.0698528
[2025-12-06 17:40:15] 2025-12-06 22:39:36,047 | INFO     | mean y: 3660184.65625
[2025-12-06 17:40:15] 2025-12-06 22:39:36,048 | INFO     | intersect: -20316011025.50473
[2025-12-06 17:40:15] 2025-12-06 22:39:36,048 | INFO     | chi2: 0.053556196768804694
[2025-12-06 17:40:15] 2025-12-06 22:39:36,048 | INFO     | current memory leak: 11.51 B/s (using 544 data points, chi2=0.05)
[2025-12-06 17:40:15] 2025-12-06 22:39:36,049 | INFO     | could have reported an average CPU frequency of 2367 MHz (23 samples)
[2025-12-06 17:40:15] 2025-12-06 22:39:36,049 | INFO     | ..............................
[2025-12-06 17:40:15] 2025-12-06 22:39:36,049 | INFO     | . Timing measurements:
[2025-12-06 17:40:15] 2025-12-06 22:39:36,049 | INFO     | . get job = 0 s
[2025-12-06 17:40:15] 2025-12-06 22:39:36,050 | INFO     | . initial setup = 2 s
[2025-12-06 17:40:15] 2025-12-06 22:39:36,050 | INFO     | . payload setup = 15 s
[2025-12-06 17:40:15] 2025-12-06 22:39:36,050 | INFO     | . stage-in = 0 s
[2025-12-06 17:40:15] 2025-12-06 22:39:36,050 | INFO     | . payload execution = 35077 s
[2025-12-06 17:40:15] 2025-12-06 22:39:36,050 | INFO     | . stage-out = 3 s
[2025-12-06 17:40:15] 2025-12-06 22:39:36,050 | INFO     | . log creation = 0 s
[2025-12-06 17:40:15] 2025-12-06 22:39:36,050 | INFO     | ..............................
[2025-12-06 17:40:15] 2025-12-06 22:39:36,133 | INFO     | 
[2025-12-06 17:40:15] 2025-12-06 22:39:36,133 | INFO     | job summary report
[2025-12-06 17:40:15] 2025-12-06 22:39:36,134 | INFO     | --------------------------------------------------
[2025-12-06 17:40:15] 2025-12-06 22:39:36,134 | INFO     | PanDA job id: 6905332266
[2025-12-06 17:40:15] 2025-12-06 22:39:36,134 | INFO     | task id: 47530725
[2025-12-06 17:40:15] 2025-12-06 22:39:36,134 | INFO     | errors: (none)
[2025-12-06 17:40:15] 2025-12-06 22:39:36,134 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-06 17:40:15] 2025-12-06 22:39:36,134 | INFO     | pilot state: finished 
[2025-12-06 17:40:15] 2025-12-06 22:39:36,134 | INFO     | transexitcode: 0
[2025-12-06 17:40:15] 2025-12-06 22:39:36,134 | INFO     | exeerrorcode: 0
[2025-12-06 17:40:15] 2025-12-06 22:39:36,134 | INFO     | exeerrordiag: 
[2025-12-06 17:40:15] 2025-12-06 22:39:36,135 | INFO     | exitcode: 0
[2025-12-06 17:40:15] 2025-12-06 22:39:36,135 | INFO     | exitmsg: OK
[2025-12-06 17:40:15] 2025-12-06 22:39:36,135 | INFO     | cpuconsumptiontime: 272215 s
[2025-12-06 17:40:15] 2025-12-06 22:39:36,135 | INFO     | nevents: 1000
[2025-12-06 17:40:15] 2025-12-06 22:39:36,135 | INFO     | neventsw: 0
[2025-12-06 17:40:15] 2025-12-06 22:39:36,135 | INFO     | pid: 9197
[2025-12-06 17:40:15] 2025-12-06 22:39:36,135 | INFO     | pgrp: 9197
[2025-12-06 17:40:15] 2025-12-06 22:39:36,135 | INFO     | corecount: 8
[2025-12-06 17:40:15] 2025-12-06 22:39:36,135 | INFO     | event service: False
[2025-12-06 17:40:15] 2025-12-06 22:39:36,136 | INFO     | sizes: {0: 2284399, 6: 2284661, 11: 2284689, 35096: 2344967, 35099: 2353961, 35101: 2354017, 35107: 2354391}
[2025-12-06 17:40:15] 2025-12-06 22:39:36,136 | INFO     | --------------------------------------------------
[2025-12-06 17:40:15] 2025-12-06 22:39:36,136 | INFO     | 
[2025-12-06 17:40:15] 2025-12-06 22:39:36,136 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-06 17:40:15] 2025-12-06 22:39:36,163 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-06 17:40:15] 2025-12-06 22:39:36,163 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-06 17:40:15] 2025-12-06 22:39:36,163 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-06 17:40:15] 2025-12-06 22:39:36,164 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-06 17:40:15] 2025-12-06 22:39:36,164 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-06 17:40:15] 2025-12-06 22:39:36,164 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-06 17:40:15] 2025-12-06 22:39:36,164 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-06 17:40:15] 2025-12-06 22:39:36,164 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-06 17:40:15] 2025-12-06 22:39:36,164 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-06 17:40:15] 2025-12-06 22:39:36,165 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-06 17:40:15] 2025-12-06 22:39:36,165 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-06 17:40:15] 2025-12-06 22:39:36,165 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-06 17:40:15] 2025-12-06 22:39:36,165 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-06 17:40:15] 2025-12-06 22:39:36,165 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-06 17:40:15] 2025-12-06 22:39:36,166 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-06 17:40:15] 2025-12-06 22:39:36,166 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-06 17:40:15] 2025-12-06 22:39:36,166 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-06 17:40:15] 2025-12-06 22:39:36,166 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-06 17:40:15] 2025-12-06 22:39:36,166 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-06 17:40:15] 2025-12-06 22:39:36,166 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-06 17:40:15] 2025-12-06 22:39:36,167 | INFO     | job 6905332266 has completed (purged errors)
[2025-12-06 17:40:15] 2025-12-06 22:39:36,167 | INFO     | overall cleanup function is called
[2025-12-06 17:40:15] 2025-12-06 22:39:37,183 | INFO     | --- collectZombieJob: --- 10, [9197]
[2025-12-06 17:40:15] 2025-12-06 22:39:37,183 | INFO     | zombie collector waiting for pid 9197
[2025-12-06 17:40:15] 2025-12-06 22:39:37,183 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-06 17:40:15] 2025-12-06 22:39:37,183 | INFO     | collected zombie processes
[2025-12-06 17:40:15] 2025-12-06 22:39:37,184 | INFO     | will attempt to kill all subprocesses of pid=9197
[2025-12-06 17:40:15] 2025-12-06 22:39:37,268 | INFO     | process IDs to be killed: [9197] (in reverse order)
[2025-12-06 17:40:15] 2025-12-06 22:39:37,326 | WARNING  | found no corresponding commands to process id(s)
[2025-12-06 17:40:15] 2025-12-06 22:39:37,327 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-06 17:40:15] 2025-12-06 22:39:37,331 | INFO     | did not find any defunct processes belonging to 9197
[2025-12-06 17:40:15] 2025-12-06 22:39:37,334 | INFO     | did not find any defunct processes belonging to 9197
[2025-12-06 17:40:15] 2025-12-06 22:39:37,336 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-06 17:40:15] 2025-12-06 22:39:37,336 | INFO     | ready for new job
[2025-12-06 17:40:15] 2025-12-06 22:39:37,337 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-06 17:40:15] 2025-12-06 22:39:37,339 | INFO     | ***************************************
[2025-12-06 17:40:15] 2025-12-06 22:39:37,339 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-06 17:40:15] 2025-12-06 22:39:37,340 | INFO     | ***************************************
[2025-12-06 17:40:15] 2025-12-06 22:39:37,340 | INFO     | 
[2025-12-06 17:40:15] 2025-12-06 22:39:37,340 | INFO     | architecture information:
[2025-12-06 17:40:15] 2025-12-06 22:39:37,341 | INFO     | executing command: cat /etc/os-release
[2025-12-06 17:40:15] 2025-12-06 22:39:37,359 | INFO     | cat /etc/os-release:
[2025-12-06 17:40:15] NAME="CentOS Linux"
[2025-12-06 17:40:15] VERSION="7 (Core)"
[2025-12-06 17:40:15] ID="centos"
[2025-12-06 17:40:15] ID_LIKE="rhel fedora"
[2025-12-06 17:40:15] VERSION_ID="7"
[2025-12-06 17:40:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-06 17:40:15] ANSI_COLOR="0;31"
[2025-12-06 17:40:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-06 17:40:15] HOME_URL="https://www.centos.org/"
[2025-12-06 17:40:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-06 17:40:15] 
[2025-12-06 17:40:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-06 17:40:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-06 17:40:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-06 17:40:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-06 17:40:15] 
[2025-12-06 17:40:15] 2025-12-06 22:39:37,360 | INFO     | ***************************************
[2025-12-06 17:40:15] 2025-12-06 22:39:37,863 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-06 17:40:15] 2025-12-06 22:39:37,884 | INFO     | sufficient remaining disk space (17745051648 B)
[2025-12-06 17:40:15] 2025-12-06 22:39:37,884 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-06 17:40:15] 2025-12-06 22:39:37,885 | INFO     | current server update state: UPDATING_FINAL
[2025-12-06 17:40:15] 2025-12-06 22:39:37,885 | INFO     | update_server=False
[2025-12-06 17:40:15] 2025-12-06 22:39:37,885 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-06 17:40:15] 2025-12-06 22:39:37,886 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-06 17:40:15] 2025-12-06 22:39:38,102 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-06 17:40:15] 2025-12-06 22:39:38,103 | INFO     | aborting loop
[2025-12-06 17:40:15] 2025-12-06 22:39:38,159 | INFO     | all data control threads have been joined
[2025-12-06 17:40:15] 2025-12-06 22:39:38,198 | INFO     | all payload control threads have been joined
[2025-12-06 17:40:15] 2025-12-06 22:39:38,820 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-06 17:40:15] 2025-12-06 22:39:38,863 | INFO     | all job control threads have been joined
[2025-12-06 17:40:15] 2025-12-06 22:39:38,891 | INFO     | [job] retrieve thread has finished
[2025-12-06 17:40:15] 2025-12-06 22:39:38,892 | INFO     | [job] queue monitor thread has finished
[2025-12-06 17:40:15] 2025-12-06 22:39:39,105 | INFO     | [job] job monitor thread has finished
[2025-12-06 17:40:15] 2025-12-06 22:39:39,161 | INFO     | [data] control thread has finished
[2025-12-06 17:40:15] 2025-12-06 22:39:39,204 | INFO     | [payload] control thread has finished
[2025-12-06 17:40:15] 2025-12-06 22:39:39,351 | INFO     | [payload] execute_payloads thread has finished
[2025-12-06 17:40:15] 2025-12-06 22:39:39,588 | INFO     | [payload] validate_pre thread has finished
[2025-12-06 17:40:15] 2025-12-06 22:39:39,740 | INFO     | [payload] failed_post thread has finished
[2025-12-06 17:40:15] 2025-12-06 22:39:39,869 | INFO     | [job] control thread has finished
[2025-12-06 17:40:15] 2025-12-06 22:39:40,012 | INFO     | [job] create_data_payload thread has finished
[2025-12-06 17:40:15] 2025-12-06 22:39:40,052 | INFO     | [data] copytool_in thread has finished
[2025-12-06 17:40:15] 2025-12-06 22:39:40,220 | INFO     | [job] validate thread has finished
[2025-12-06 17:40:15] 2025-12-06 22:39:40,355 | INFO     | [payload] validate_post thread has finished
[2025-12-06 17:40:15] 2025-12-06 22:39:40,710 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-06 17:40:15] 2025-12-06 22:39:40,826 | INFO     | [data] copytool_out thread has finished
[2025-12-06 17:40:15] 2025-12-06 22:39:44,712 | INFO     | [data] queue_monitor thread has finished
[2025-12-06 17:40:15] 2025-12-06 22:39:48,535 | INFO     | job.realtimelogging is not enabled
[2025-12-06 17:40:15] 2025-12-06 22:39:49,539 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-06 17:40:15] 2025-12-06 22:40:07,762 | INFO     | PID=1974 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-06 17:40:15] 2025-12-06 22:40:07,762 | INFO     | found 0 job(s) in 20 queues
[2025-12-06 17:40:15] 2025-12-06 22:40:07,762 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-06 17:40:15] 2025-12-06 22:40:07,762 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-06 17:40:15] 2025-12-06 22:40:09,056 | INFO     | [monitor] cgroup control has ended
[2025-12-06 17:40:15] 2025-12-06 22:40:10,066 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139656669837120)>', '<ExcThread(monitor, started 139655953508096)>']
[2025-12-06 17:40:15] 2025-12-06 22:40:10,778 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-06 17:40:15] 2025-12-06 22:40:10,778 | INFO     | [monitor] control thread has ended
[2025-12-06 17:40:15] 2025-12-06 22:40:15,066 | INFO     | all workflow threads have been joined
[2025-12-06 17:40:15] 2025-12-06 22:40:15,067 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-06 17:40:15] 2025-12-06 22:40:15,067 | INFO     | traces error code: 0
[2025-12-06 17:40:15] 2025-12-06 22:40:15,068 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-06 17:40:15] 2025-12-06 22:40:15,175 [wrapper] ==== pilot stdout END ====
[2025-12-06 17:40:15] 2025-12-06 22:40:15,180 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-06 17:40:15] 2025-12-06 22:40:15,185 [wrapper] pilotpid: 1974
[2025-12-06 17:40:15] 2025-12-06 22:40:15,190 [wrapper] Pilot exit status: 0
[2025-12-06 17:40:15] 2025-12-06 22:40:15,206 [wrapper] pandaids: 6905332266
[2025-12-06 17:40:15] 2025-12-06 22:40:15,249 [wrapper] cleanup supervisor_pilot  8979 1975
[2025-12-06 17:40:15] 2025-12-06 22:40:15,255 [wrapper] Test setup, not cleaning
[2025-12-06 17:40:15] 2025-12-06 22:40:15,260 [wrapper] apfmon messages muted
[2025-12-06 17:40:15] 2025-12-06 22:40:15,265 [wrapper] ==== wrapper stdout END ====
[2025-12-06 17:40:15] 2025-12-06 22:40:15,269 [wrapper] ==== wrapper stderr END ====
[2025-12-06 17:40:15]  *** Error codes and diagnostics ***
[2025-12-06 17:40:15]     "exeErrorCode": 0,
[2025-12-06 17:40:15]     "exeErrorDiag": "",
[2025-12-06 17:40:15]     "pilotErrorCode": 0,
[2025-12-06 17:40:15]     "pilotErrorDiag": "",
[2025-12-06 17:40:15]  *** Listing of results directory ***
[2025-12-06 17:40:15] total 1075156
[2025-12-06 17:40:15] -rw-r--r-- 1 boincer umatlas    576529 Nov 29 19:16 pilot3.tar.gz
[2025-12-06 17:40:15] -rwx------ 1 boincer umatlas     36292 Nov 29 19:18 runpilot2-wrapper.sh
[2025-12-06 17:40:15] -rw-r--r-- 1 boincer umatlas      5112 Nov 29 19:18 queuedata.json
[2025-12-06 17:40:15] -rw-r--r-- 1 boincer umatlas       100 Dec  6 07:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-06 17:40:15] -rwxr-xr-x 1 boincer umatlas      7986 Dec  6 07:53 run_atlas
[2025-12-06 17:40:15] -rw-r--r-- 1 boincer umatlas       105 Dec  6 07:53 job.xml
[2025-12-06 17:40:15] -rw-r--r-- 2 boincer umatlas 379080351 Dec  6 07:53 EVNT.47530720._000049.pool.root.1
[2025-12-06 17:40:15] -rw-r--r-- 2 boincer umatlas     15847 Dec  6 07:53 start_atlas.sh
[2025-12-06 17:40:15] drwxrwx--x 2 boincer umatlas      4096 Dec  6 07:53 shared
[2025-12-06 17:40:15] -rw-r--r-- 2 boincer umatlas    590121 Dec  6 07:53 input.tar.gz
[2025-12-06 17:40:15] -rw-r--r-- 1 boincer umatlas         0 Dec  6 07:53 boinc_lockfile
[2025-12-06 17:40:15] -rw-r--r-- 1 boincer umatlas      2878 Dec  6 07:53 pandaJob.out
[2025-12-06 17:40:15] -rw------- 1 boincer umatlas        57 Dec  6 07:53 setup.sh.local
[2025-12-06 17:40:15] -rw------- 1 boincer umatlas    985910 Dec  6 07:54 agis_schedconf.cvmfs.json
[2025-12-06 17:40:15] drwx------ 5 boincer umatlas      4096 Dec  6 07:54 pilot3
[2025-12-06 17:40:15] -rw-r--r-- 1 boincer umatlas       533 Dec  6 17:31 boinc_task_state.xml
[2025-12-06 17:40:15] -rw-r--r-- 1 boincer umatlas      5911 Dec  6 17:36 init_data.xml
[2025-12-06 17:40:15] -rw------- 1 boincer umatlas 704303928 Dec  6 17:39 HITS.47530725._001931.pool.root.1
[2025-12-06 17:40:15] -rw------- 1 boincer umatlas        95 Dec  6 17:39 pilot_heartbeat.json
[2025-12-06 17:40:15] -rw------- 1 boincer umatlas      1060 Dec  6 17:39 memory_monitor_summary.json
[2025-12-06 17:40:15] -rw------- 1 boincer umatlas   1516240 Dec  6 17:39 agis_ddmendpoints.agis.ALL.json
[2025-12-06 17:40:15] -rw------- 1 boincer umatlas   1958418 Dec  6 17:39 log.47530725._001931.job.log.tgz.1
[2025-12-06 17:40:15] -rw------- 1 boincer umatlas     27756 Dec  6 17:39 heartbeat.json
[2025-12-06 17:40:15] -rw-r--r-- 1 boincer umatlas        29 Dec  6 17:39 wrapper_checkpoint.txt
[2025-12-06 17:40:15] -rw-r--r-- 1 boincer umatlas      8192 Dec  6 17:39 boinc_mmap_file
[2025-12-06 17:40:15] -rw------- 1 boincer umatlas      4817 Dec  6 17:40 pilotlog.txt
[2025-12-06 17:40:15] -rw------- 1 boincer umatlas   4850857 Dec  6 17:40 log.47530725._001931.job.log.1
[2025-12-06 17:40:15] -rw------- 1 boincer umatlas       353 Dec  6 17:40 output.list
[2025-12-06 17:40:15] -rw-r--r-- 1 boincer umatlas       620 Dec  6 17:40 runtime_log
[2025-12-06 17:40:15] -rw------- 1 boincer umatlas   6850560 Dec  6 17:40 result.tar.gz
[2025-12-06 17:40:15] -rw-r--r-- 1 boincer umatlas      9338 Dec  6 17:40 runtime_log.err
[2025-12-06 17:40:15] -rw------- 1 boincer umatlas       667 Dec  6 17:40 D6sNDmyJkj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmqJPKDmMN2tom.diag
[2025-12-06 17:40:15] -rw-r--r-- 1 boincer umatlas     21259 Dec  6 17:40 stderr.txt
[2025-12-06 17:40:15] HITS file was successfully produced:
[2025-12-06 17:40:15] -rw------- 1 boincer umatlas 704303928 Dec  6 17:39 shared/HITS.pool.root.1
[2025-12-06 17:40:15]  *** Contents of shared directory: ***
[2025-12-06 17:40:15] total 1065292
[2025-12-06 17:40:15] -rw-r--r-- 2 boincer umatlas 379080351 Dec  6 07:53 ATLAS.root_0
[2025-12-06 17:40:15] -rw-r--r-- 2 boincer umatlas     15847 Dec  6 07:53 start_atlas.sh
[2025-12-06 17:40:15] -rw-r--r-- 2 boincer umatlas    590121 Dec  6 07:53 input.tar.gz
[2025-12-06 17:40:15] -rw------- 1 boincer umatlas 704303928 Dec  6 17:39 HITS.pool.root.1
[2025-12-06 17:40:15] -rw------- 1 boincer umatlas   6850560 Dec  6 17:40 result.tar.gz
17:40:16 (30626): run_atlas exited; CPU time 269849.793377
17:40:16 (30626): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN