Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:42:04 (2104548): wrapper (7.7.26015): starting
18:42:04 (2104548): wrapper: running run_atlas (--nthreads 4)
[2025-12-06 18:42:04] Arguments: --nthreads 4
[2025-12-06 18:42:04] Threads: 4
[2025-12-06 18:42:04] Checking for CVMFS
[2025-12-06 18:42:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-06 18:42:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-06 18:42:04] Running cvmfs_config stat atlas.cern.ch
[2025-12-06 18:42:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-06 18:42:04] 2.9.2.0 2420625 25853 108292 153698 2 68 35030974 36864000 0 130560 1 10260730 99.964 1062991 938 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-06 18:42:04] CVMFS is ok
[2025-12-06 18:42:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-06 18:42:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-06 18:42:04] Further information can be found at the LHC@home message board.
[2025-12-06 18:42:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-06 18:42:04] Checking for apptainer binary...
[2025-12-06 18:42:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-06 18:42:04] Running /usr/bin/apptainer --version
[2025-12-06 18:42:04] apptainer version 1.4.1-1.1
[2025-12-06 18:42:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-06 18:42:04] thA350a
[2025-12-06 18:42:04] apptainer works
[2025-12-06 18:42:04] Set ATHENA_PROC_NUMBER=4
[2025-12-06 18:42:04] Set ATHENA_CORE_NUMBER=4
[2025-12-06 18:42:04] Starting ATLAS job with PandaID=6901249273
[2025-12-06 18:42:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-07 00:40:05]  *** The last 200 lines of the pilot log: ***
[2025-12-07 00:40:05] 2025-12-06 23:39:33,054 | INFO     | extracted standard info from prmon json
[2025-12-07 00:40:05] 2025-12-06 23:39:33,054 | INFO     | extracted standard memory fields from prmon json
[2025-12-07 00:40:05] 2025-12-06 23:39:33,054 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-07 00:40:05] 2025-12-06 23:39:33,057 | INFO     | fitting pss+swap vs Time
[2025-12-07 00:40:05] 2025-12-06 23:39:33,057 | INFO     | sum of square deviations: 13408995600.0
[2025-12-07 00:40:05] 2025-12-06 23:39:33,058 | INFO     | sum of deviations: 222200778066.0
[2025-12-07 00:40:05] 2025-12-06 23:39:33,058 | INFO     | mean x: 1765053633.0
[2025-12-07 00:40:05] 2025-12-06 23:39:33,058 | INFO     | mean y: 2757669.415954416
[2025-12-07 00:40:05] 2025-12-06 23:39:33,058 | INFO     | intersect: -29245987149.38464
[2025-12-07 00:40:05] 2025-12-06 23:39:33,058 | INFO     | chi2: 4.353106615220011
[2025-12-07 00:40:05] 2025-12-06 23:39:33,058 | INFO     | sum of square deviations: 12844082682.5
[2025-12-07 00:40:05] 2025-12-06 23:39:33,060 | INFO     | sum of deviations: 270962251899.5
[2025-12-07 00:40:05] 2025-12-06 23:39:33,060 | INFO     | mean x: 1765053480.5
[2025-12-07 00:40:05] 2025-12-06 23:39:33,060 | INFO     | mean y: 2770738.523121387
[2025-12-07 00:40:05] 2025-12-06 23:39:33,060 | INFO     | intersect: -37233276211.7944
[2025-12-07 00:40:05] 2025-12-06 23:39:33,060 | INFO     | chi2: 3.20623989075655
[2025-12-07 00:40:05] 2025-12-06 23:39:33,060 | INFO     | current chi2=3.20623989075655 (change=26.345936955773304 %)
[2025-12-07 00:40:05] 2025-12-06 23:39:33,060 | INFO     | sum of square deviations: 12295263090.0
[2025-12-07 00:40:05] 2025-12-06 23:39:33,061 | INFO     | sum of deviations: 265462254030.00006
[2025-12-07 00:40:05] 2025-12-06 23:39:33,061 | INFO     | mean x: 1765053328.0
[2025-12-07 00:40:05] 2025-12-06 23:39:33,061 | INFO     | mean y: 2769210.2346041054
[2025-12-07 00:40:05] 2025-12-06 23:39:33,061 | INFO     | intersect: -38105812241.358635
[2025-12-07 00:40:05] 2025-12-06 23:39:33,061 | INFO     | chi2: 3.203914102029065
[2025-12-07 00:40:05] 2025-12-06 23:39:33,061 | INFO     | current chi2=3.203914102029065 (change=0.07253944828614227 %)
[2025-12-07 00:40:05] 2025-12-06 23:39:33,062 | INFO     | right removable region: 340
[2025-12-07 00:40:05] 2025-12-06 23:39:33,062 | INFO     | sum of square deviations: 12844082682.5
[2025-12-07 00:40:05] 2025-12-06 23:39:33,063 | INFO     | sum of deviations: 116180516796.0
[2025-12-07 00:40:05] 2025-12-06 23:39:33,063 | INFO     | mean x: 1765053785.5
[2025-12-07 00:40:05] 2025-12-06 23:39:33,063 | INFO     | mean y: 2786250.38150289
[2025-12-07 00:40:05] 2025-12-06 23:39:33,063 | INFO     | intersect: -15962920763.598251
[2025-12-07 00:40:05] 2025-12-06 23:39:33,063 | INFO     | chi2: 1.6781932626014904
[2025-12-07 00:40:05] 2025-12-06 23:39:33,063 | INFO     | current chi2=1.6781932626014904 (change=61.44837673550359 %)
[2025-12-07 00:40:05] 2025-12-06 23:39:33,063 | INFO     | sum of square deviations: 12295263090.0
[2025-12-07 00:40:05] 2025-12-06 23:39:33,064 | INFO     | sum of deviations: 79385007160.00003
[2025-12-07 00:40:05] 2025-12-06 23:39:33,064 | INFO     | mean x: 1765053938.0
[2025-12-07 00:40:05] 2025-12-06 23:39:33,065 | INFO     | mean y: 2796411.6304985336
[2025-12-07 00:40:05] 2025-12-06 23:39:33,065 | INFO     | intersect: -11393366360.99678
[2025-12-07 00:40:05] 2025-12-06 23:39:33,065 | INFO     | chi2: 1.204589573726405
[2025-12-07 00:40:05] 2025-12-06 23:39:33,065 | INFO     | current chi2=1.204589573726405 (change=28.221045777583303 %)
[2025-12-07 00:40:05] 2025-12-06 23:39:33,065 | INFO     | sum of square deviations: 11762304260.0
[2025-12-07 00:40:05] 2025-12-06 23:39:33,066 | INFO     | sum of deviations: 72052529976.00003
[2025-12-07 00:40:05] 2025-12-06 23:39:33,066 | INFO     | mean x: 1765054090.5
[2025-12-07 00:40:05] 2025-12-06 23:39:33,066 | INFO     | mean y: 2798508.529761905
[2025-12-07 00:40:05] 2025-12-06 23:39:33,066 | INFO     | intersect: -10809420760.232183
[2025-12-07 00:40:05] 2025-12-06 23:39:33,066 | INFO     | chi2: 1.2024454333130357
[2025-12-07 00:40:05] 2025-12-06 23:39:33,066 | INFO     | current chi2=1.2024454333130357 (change=0.1779975902278806 %)
[2025-12-07 00:40:05] 2025-12-06 23:39:33,066 | INFO     | left removable region: 30
[2025-12-07 00:40:05] 2025-12-06 23:39:33,067 | INFO     | sum of square deviations: 9237596457.5
[2025-12-07 00:40:05] 2025-12-06 23:39:33,067 | INFO     | sum of deviations: 101052180381.0
[2025-12-07 00:40:05] 2025-12-06 23:39:33,068 | INFO     | mean x: 1765054212.5
[2025-12-07 00:40:05] 2025-12-06 23:39:33,068 | INFO     | mean y: 2816858.329032258
[2025-12-07 00:40:05] 2025-12-06 23:39:33,068 | INFO     | intersect: -19305514858.08638
[2025-12-07 00:40:05] 2025-12-06 23:39:33,068 | INFO     | chi2: 0.03432201207311428
[2025-12-07 00:40:05] 2025-12-06 23:39:33,068 | INFO     | current memory leak: 10.94 B/s (using 310 data points, chi2=0.03)
[2025-12-07 00:40:05] 2025-12-06 23:39:33,068 | INFO     | could have reported an average CPU frequency of 3845 MHz (15 samples)
[2025-12-07 00:40:05] 2025-12-06 23:39:33,068 | INFO     | ..............................
[2025-12-07 00:40:05] 2025-12-06 23:39:33,068 | INFO     | . Timing measurements:
[2025-12-07 00:40:05] 2025-12-06 23:39:33,068 | INFO     | . get job = 0 s
[2025-12-07 00:40:05] 2025-12-06 23:39:33,068 | INFO     | . initial setup = 1 s
[2025-12-07 00:40:05] 2025-12-06 23:39:33,068 | INFO     | . payload setup = 6 s
[2025-12-07 00:40:05] 2025-12-06 23:39:33,068 | INFO     | . stage-in = 0 s
[2025-12-07 00:40:05] 2025-12-06 23:39:33,068 | INFO     | . payload execution = 21405 s
[2025-12-07 00:40:05] 2025-12-06 23:39:33,068 | INFO     | . stage-out = 1 s
[2025-12-07 00:40:05] 2025-12-06 23:39:33,068 | INFO     | . log creation = 0 s
[2025-12-07 00:40:05] 2025-12-06 23:39:33,068 | INFO     | ..............................
[2025-12-07 00:40:05] 2025-12-06 23:39:33,109 | INFO     | 
[2025-12-07 00:40:05] 2025-12-06 23:39:33,109 | INFO     | job summary report
[2025-12-07 00:40:05] 2025-12-06 23:39:33,110 | INFO     | --------------------------------------------------
[2025-12-07 00:40:05] 2025-12-06 23:39:33,110 | INFO     | PanDA job id: 6901249273
[2025-12-07 00:40:05] 2025-12-06 23:39:33,110 | INFO     | task id: 47531058
[2025-12-07 00:40:05] 2025-12-06 23:39:33,110 | INFO     | errors: (none)
[2025-12-07 00:40:05] 2025-12-06 23:39:33,110 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-07 00:40:05] 2025-12-06 23:39:33,110 | INFO     | pilot state: finished 
[2025-12-07 00:40:05] 2025-12-06 23:39:33,110 | INFO     | transexitcode: 0
[2025-12-07 00:40:05] 2025-12-06 23:39:33,110 | INFO     | exeerrorcode: 0
[2025-12-07 00:40:05] 2025-12-06 23:39:33,110 | INFO     | exeerrordiag: 
[2025-12-07 00:40:05] 2025-12-06 23:39:33,110 | INFO     | exitcode: 0
[2025-12-07 00:40:05] 2025-12-06 23:39:33,110 | INFO     | exitmsg: OK
[2025-12-07 00:40:05] 2025-12-06 23:39:33,110 | INFO     | cpuconsumptiontime: 83561 s
[2025-12-07 00:40:05] 2025-12-06 23:39:33,110 | INFO     | nevents: 1000
[2025-12-07 00:40:05] 2025-12-06 23:39:33,110 | INFO     | neventsw: 0
[2025-12-07 00:40:05] 2025-12-06 23:39:33,110 | INFO     | pid: 2115600
[2025-12-07 00:40:05] 2025-12-06 23:39:33,110 | INFO     | pgrp: 2115600
[2025-12-07 00:40:05] 2025-12-06 23:39:33,110 | INFO     | corecount: 4
[2025-12-07 00:40:05] 2025-12-06 23:39:33,110 | INFO     | event service: False
[2025-12-07 00:40:05] 2025-12-06 23:39:33,110 | INFO     | sizes: {0: 2284457, 4: 2284719, 11: 2284747, 21416: 2338371, 21417: 2338370, 21418: 2347426, 21419: 2347610, 21427: 2347856}
[2025-12-07 00:40:05] 2025-12-06 23:39:33,110 | INFO     | --------------------------------------------------
[2025-12-07 00:40:05] 2025-12-06 23:39:33,110 | INFO     | 
[2025-12-07 00:40:05] 2025-12-06 23:39:33,110 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-07 00:40:05] 2025-12-06 23:39:33,129 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-07 00:40:05] 2025-12-06 23:39:33,129 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-07 00:40:05] 2025-12-06 23:39:33,129 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-07 00:40:05] 2025-12-06 23:39:33,129 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-07 00:40:05] 2025-12-06 23:39:33,130 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-07 00:40:05] 2025-12-06 23:39:33,130 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-07 00:40:05] 2025-12-06 23:39:33,130 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-07 00:40:05] 2025-12-06 23:39:33,130 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-07 00:40:05] 2025-12-06 23:39:33,130 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-07 00:40:05] 2025-12-06 23:39:33,130 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-07 00:40:05] 2025-12-06 23:39:33,130 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-07 00:40:05] 2025-12-06 23:39:33,130 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-07 00:40:05] 2025-12-06 23:39:33,130 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-07 00:40:05] 2025-12-06 23:39:33,130 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-07 00:40:05] 2025-12-06 23:39:33,130 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-07 00:40:05] 2025-12-06 23:39:33,130 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-07 00:40:05] 2025-12-06 23:39:33,130 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-07 00:40:05] 2025-12-06 23:39:33,130 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-07 00:40:05] 2025-12-06 23:39:33,130 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-07 00:40:05] 2025-12-06 23:39:33,130 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-07 00:40:05] 2025-12-06 23:39:33,130 | INFO     | job 6901249273 has completed (purged errors)
[2025-12-07 00:40:05] 2025-12-06 23:39:33,130 | INFO     | overall cleanup function is called
[2025-12-07 00:40:05] 2025-12-06 23:39:34,140 | INFO     | --- collectZombieJob: --- 10, [2115600]
[2025-12-07 00:40:05] 2025-12-06 23:39:34,140 | INFO     | zombie collector waiting for pid 2115600
[2025-12-07 00:40:05] 2025-12-06 23:39:34,140 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-07 00:40:05] 2025-12-06 23:39:34,140 | INFO     | collected zombie processes
[2025-12-07 00:40:05] 2025-12-06 23:39:34,140 | INFO     | will attempt to kill all subprocesses of pid=2115600
[2025-12-07 00:40:05] 2025-12-06 23:39:34,197 | INFO     | process IDs to be killed: [2115600] (in reverse order)
[2025-12-07 00:40:05] 2025-12-06 23:39:34,236 | WARNING  | found no corresponding commands to process id(s)
[2025-12-07 00:40:05] 2025-12-06 23:39:34,237 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-07 00:40:05] 2025-12-06 23:39:34,239 | INFO     | did not find any defunct processes belonging to 2115600
[2025-12-07 00:40:05] 2025-12-06 23:39:34,241 | INFO     | did not find any defunct processes belonging to 2115600
[2025-12-07 00:40:05] 2025-12-06 23:39:34,242 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-07 00:40:05] 2025-12-06 23:39:34,242 | INFO     | ready for new job
[2025-12-07 00:40:05] 2025-12-06 23:39:34,242 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-07 00:40:05] 2025-12-06 23:39:34,243 | INFO     | ***************************************
[2025-12-07 00:40:05] 2025-12-06 23:39:34,243 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-07 00:40:05] 2025-12-06 23:39:34,243 | INFO     | ***************************************
[2025-12-07 00:40:05] 2025-12-06 23:39:34,243 | INFO     | 
[2025-12-07 00:40:05] 2025-12-06 23:39:34,244 | INFO     | architecture information:
[2025-12-07 00:40:05] 2025-12-06 23:39:34,244 | INFO     | executing command: cat /etc/os-release
[2025-12-07 00:40:05] 2025-12-06 23:39:34,259 | INFO     | cat /etc/os-release:
[2025-12-07 00:40:05] NAME="CentOS Linux"
[2025-12-07 00:40:05] VERSION="7 (Core)"
[2025-12-07 00:40:05] ID="centos"
[2025-12-07 00:40:05] ID_LIKE="rhel fedora"
[2025-12-07 00:40:05] VERSION_ID="7"
[2025-12-07 00:40:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-07 00:40:05] ANSI_COLOR="0;31"
[2025-12-07 00:40:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-07 00:40:05] HOME_URL="https://www.centos.org/"
[2025-12-07 00:40:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-07 00:40:05] 
[2025-12-07 00:40:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-07 00:40:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-07 00:40:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-07 00:40:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-07 00:40:05] 
[2025-12-07 00:40:05] 2025-12-06 23:39:34,259 | INFO     | ***************************************
[2025-12-07 00:40:05] 2025-12-06 23:39:34,762 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-07 00:40:05] 2025-12-06 23:39:34,776 | INFO     | sufficient remaining disk space (224807354368 B)
[2025-12-07 00:40:05] 2025-12-06 23:39:34,777 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-07 00:40:05] 2025-12-06 23:39:34,777 | INFO     | current server update state: UPDATING_FINAL
[2025-12-07 00:40:05] 2025-12-06 23:39:34,777 | INFO     | update_server=False
[2025-12-07 00:40:05] 2025-12-06 23:39:34,777 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-07 00:40:05] 2025-12-06 23:39:34,777 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-07 00:40:05] 2025-12-06 23:39:34,777 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-07 00:40:05] 2025-12-06 23:39:34,777 | INFO     | aborting loop
[2025-12-07 00:40:05] 2025-12-06 23:39:34,777 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-07 00:40:05] 2025-12-06 23:39:35,408 | INFO     | all job control threads have been joined
[2025-12-07 00:40:05] 2025-12-06 23:39:35,443 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-07 00:40:05] 2025-12-06 23:39:35,782 | INFO     | [job] retrieve thread has finished
[2025-12-07 00:40:05] 2025-12-06 23:39:35,782 | INFO     | [job] queue monitor thread has finished
[2025-12-07 00:40:05] 2025-12-06 23:39:35,783 | INFO     | [job] job monitor thread has finished
[2025-12-07 00:40:05] 2025-12-06 23:39:35,810 | INFO     | all data control threads have been joined
[2025-12-07 00:40:05] 2025-12-06 23:39:35,899 | INFO     | all payload control threads have been joined
[2025-12-07 00:40:05] 2025-12-06 23:39:36,114 | INFO     | [payload] failed_post thread has finished
[2025-12-07 00:40:05] 2025-12-06 23:39:36,323 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-07 00:40:05] 2025-12-06 23:39:36,331 | INFO     | [data] copytool_in thread has finished
[2025-12-07 00:40:05] 2025-12-06 23:39:36,414 | INFO     | [job] control thread has finished
[2025-12-07 00:40:05] 2025-12-06 23:39:36,633 | INFO     | [job] validate thread has finished
[2025-12-07 00:40:05] 2025-12-06 23:39:36,706 | INFO     | [payload] validate_post thread has finished
[2025-12-07 00:40:05] 2025-12-06 23:39:36,783 | INFO     | [data] copytool_out thread has finished
[2025-12-07 00:40:05] 2025-12-06 23:39:36,815 | INFO     | [data] control thread has finished
[2025-12-07 00:40:05] 2025-12-06 23:39:36,904 | INFO     | [payload] control thread has finished
[2025-12-07 00:40:05] 2025-12-06 23:39:36,921 | INFO     | [payload] execute_payloads thread has finished
[2025-12-07 00:40:05] 2025-12-06 23:39:37,120 | INFO     | [payload] validate_pre thread has finished
[2025-12-07 00:40:05] 2025-12-06 23:39:37,207 | INFO     | [job] create_data_payload thread has finished
[2025-12-07 00:40:05] 2025-12-06 23:39:39,448 | INFO     | [data] queue_monitor thread has finished
[2025-12-07 00:40:05] 2025-12-06 23:39:40,736 | INFO     | [monitor] cgroup control has ended
[2025-12-07 00:40:05] 2025-12-06 23:39:41,925 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140180429449024)>', '<ExcThread(monitor, started 140179796907776)>']
[2025-12-07 00:40:05] 2025-12-06 23:39:46,947 | INFO     | all workflow threads have been joined
[2025-12-07 00:40:05] 2025-12-06 23:39:46,947 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-07 00:40:05] 2025-12-06 23:39:46,947 | INFO     | traces error code: 0
[2025-12-07 00:40:05] 2025-12-06 23:39:46,948 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-07 00:40:05] 2025-12-06 23:40:04,880 | INFO     | PID=2108350 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-07 00:40:05] 2025-12-06 23:40:04,880 | INFO     | found 0 job(s) in 20 queues
[2025-12-07 00:40:05] 2025-12-06 23:40:04,880 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-07 00:40:05] 2025-12-06 23:40:04,880 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-07 00:40:05] 2025-12-06 23:40:04,880 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-07 00:40:05] 2025-12-06 23:40:04,880 | INFO     | [monitor] control thread has ended
[2025-12-07 00:40:05] 2025-12-06 23:40:04,958 [wrapper] ==== pilot stdout END ====
[2025-12-07 00:40:05] 2025-12-06 23:40:04,962 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-07 00:40:05] 2025-12-06 23:40:04,966 [wrapper] pilotpid: 2108350
[2025-12-07 00:40:05] 2025-12-06 23:40:04,970 [wrapper] Pilot exit status: 0
[2025-12-07 00:40:05] 2025-12-06 23:40:04,982 [wrapper] pandaids: 6901249273
[2025-12-07 00:40:05] 2025-12-06 23:40:05,007 [wrapper] cleanup supervisor_pilot 2160026 2108351
[2025-12-07 00:40:05] 2025-12-06 23:40:05,011 [wrapper] Test setup, not cleaning
[2025-12-07 00:40:05] 2025-12-06 23:40:05,015 [wrapper] apfmon messages muted
[2025-12-07 00:40:05] 2025-12-06 23:40:05,019 [wrapper] ==== wrapper stdout END ====
[2025-12-07 00:40:05] 2025-12-06 23:40:05,022 [wrapper] ==== wrapper stderr END ====
[2025-12-07 00:40:05]  *** Error codes and diagnostics ***
[2025-12-07 00:40:05]     "exeErrorCode": 0,
[2025-12-07 00:40:05]     "exeErrorDiag": "",
[2025-12-07 00:40:05]     "pilotErrorCode": 0,
[2025-12-07 00:40:05]     "pilotErrorDiag": "",
[2025-12-07 00:40:05]  *** Listing of results directory ***
[2025-12-07 00:40:05] total 1063120
[2025-12-07 00:40:05] -rw-r--r-- 1 boinc boinc    576529 Nov 29 10:19 pilot3.tar.gz
[2025-12-07 00:40:05] -rwx------ 1 boinc boinc     36292 Nov 29 10:22 runpilot2-wrapper.sh
[2025-12-07 00:40:05] -rw-r--r-- 1 boinc boinc      5112 Nov 29 10:26 queuedata.json
[2025-12-07 00:40:05] -rw-r--r-- 1 boinc boinc       100 Dec  6 18:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-07 00:40:05] -rwxr-xr-x 1 boinc boinc      7986 Dec  6 18:42 run_atlas
[2025-12-07 00:40:05] -rw-r--r-- 1 boinc boinc       105 Dec  6 18:42 job.xml
[2025-12-07 00:40:05] -rw-r--r-- 2 boinc boinc 375791769 Dec  6 18:42 EVNT.47531050._000573.pool.root.1
[2025-12-07 00:40:05] drwxrwx--x 2 boinc boinc      4096 Dec  6 18:42 shared
[2025-12-07 00:40:05] -rw-r--r-- 2 boinc boinc    590126 Dec  6 18:42 input.tar.gz
[2025-12-07 00:40:05] -rw-r--r-- 2 boinc boinc     15847 Dec  6 18:42 start_atlas.sh
[2025-12-07 00:40:05] -rw-r--r-- 1 boinc boinc         0 Dec  6 18:42 boinc_setup_complete
[2025-12-07 00:40:05] -rw-r--r-- 1 boinc boinc      6380 Dec  6 18:42 init_data.xml
[2025-12-07 00:40:05] -rw-r--r-- 1 boinc boinc         0 Dec  6 18:42 boinc_lockfile
[2025-12-07 00:40:05] -rw-r--r-- 1 boinc boinc      2881 Dec  6 18:42 pandaJob.out
[2025-12-07 00:40:05] -rw------- 1 boinc boinc    985902 Dec  6 18:42 agis_schedconf.cvmfs.json
[2025-12-07 00:40:05] drwx------ 5 boinc boinc      4096 Dec  6 18:42 pilot3
[2025-12-07 00:40:05] -rw-r--r-- 1 boinc boinc       532 Dec  7 00:35 boinc_task_state.xml
[2025-12-07 00:40:05] -rw------- 1 boinc boinc 700230501 Dec  7 00:39 HITS.47531058._001886.pool.root.1
[2025-12-07 00:40:05] -rw------- 1 boinc boinc      1025 Dec  7 00:39 memory_monitor_summary.json
[2025-12-07 00:40:05] -rw------- 1 boinc boinc   1516240 Dec  7 00:39 agis_ddmendpoints.agis.ALL.json
[2025-12-07 00:40:05] -rw------- 1 boinc boinc   1309897 Dec  7 00:39 log.47531058._001886.job.log.tgz.1
[2025-12-07 00:40:05] -rw------- 1 boinc boinc        95 Dec  7 00:39 pilot_heartbeat.json
[2025-12-07 00:40:05] -rw------- 1 boinc boinc     27110 Dec  7 00:39 heartbeat.json
[2025-12-07 00:40:05] -rw-r--r-- 1 boinc boinc      8192 Dec  7 00:39 boinc_mmap_file
[2025-12-07 00:40:05] -rw-r--r-- 1 boinc boinc        28 Dec  7 00:39 wrapper_checkpoint.txt
[2025-12-07 00:40:05] -rw------- 1 boinc boinc       747 Dec  7 00:40 pilotlog.txt
[2025-12-07 00:40:05] -rw------- 1 boinc boinc   3026317 Dec  7 00:40 log.47531058._001886.job.log.1
[2025-12-07 00:40:05] -rw------- 1 boinc boinc       353 Dec  7 00:40 output.list
[2025-12-07 00:40:05] -rw-r--r-- 1 boinc boinc       620 Dec  7 00:40 runtime_log
[2025-12-07 00:40:05] -rw------- 1 boinc boinc   4372480 Dec  7 00:40 result.tar.gz
[2025-12-07 00:40:05] -rw-r--r-- 1 boinc boinc      8903 Dec  7 00:40 runtime_log.err
[2025-12-07 00:40:05] -rw------- 1 boinc boinc       666 Dec  7 00:40 1cqKDmELWj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm2rLKDmwOtApn.diag
[2025-12-07 00:40:05] -rw-r--r-- 1 boinc boinc     21027 Dec  7 00:40 stderr.txt
[2025-12-07 00:40:05] HITS file was successfully produced:
[2025-12-07 00:40:05] -rw------- 1 boinc boinc 700230501 Dec  7 00:39 shared/HITS.pool.root.1
[2025-12-07 00:40:05]  *** Contents of shared directory: ***
[2025-12-07 00:40:05] total 1055684
[2025-12-07 00:40:05] -rw-r--r-- 2 boinc boinc 375791769 Dec  6 18:42 ATLAS.root_0
[2025-12-07 00:40:05] -rw-r--r-- 2 boinc boinc    590126 Dec  6 18:42 input.tar.gz
[2025-12-07 00:40:05] -rw-r--r-- 2 boinc boinc     15847 Dec  6 18:42 start_atlas.sh
[2025-12-07 00:40:05] -rw------- 1 boinc boinc 700230501 Dec  7 00:39 HITS.pool.root.1
[2025-12-07 00:40:05] -rw------- 1 boinc boinc   4372480 Dec  7 00:40 result.tar.gz
00:40:06 (2104548): run_atlas exited; CPU time 83582.681305
00:40:06 (2104548): called boinc_finish(0)

</stderr_txt>
]]>

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