Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:34:57 (27994): wrapper (7.7.26015): starting
01:34:57 (27994): wrapper: running run_atlas (--nthreads 8)
[2025-12-06 01:34:57] Arguments: --nthreads 8
[2025-12-06 01:34:57] Threads: 8
[2025-12-06 01:34:57] Checking for CVMFS
[2025-12-06 01:34:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-06 01:34:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-06 01:34:59] Running cvmfs_config stat atlas.cern.ch
[2025-12-06 01:35:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-06 01:35:00] 2.11.2.0 16850 299007 140652 153671 3 271 13680639 25165825 2496 130560 11 142420100 99.879 82671107 2908 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-06 01:35:00] CVMFS is ok
[2025-12-06 01:35:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-06 01:35:00] Checking for apptainer binary...
[2025-12-06 01:35:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-06 01:35:00] Running /usr/bin/apptainer --version
[2025-12-06 01:35:00] apptainer version 1.3.2-1.el7
[2025-12-06 01:35:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-06 01:35:15] cg-vwn401.simple-grid.lan
[2025-12-06 01:35:15] apptainer works
[2025-12-06 01:35:15] Set ATHENA_PROC_NUMBER=8
[2025-12-06 01:35:15] Set ATHENA_CORE_NUMBER=8
[2025-12-06 01:35:15] Starting ATLAS job with PandaID=6896716193
[2025-12-06 01:35:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-06 22:02:08]  *** The last 200 lines of the pilot log: ***
[2025-12-06 22:02:08] 2025-12-06 21:01:25,931 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-06 22:02:08] 2025-12-06 21:01:26,059 | INFO     | time since job start (73357s) is within the limit (172800.0s)
[2025-12-06 22:02:08] 2025-12-06 21:01:28,067 | INFO     | time since job start (73359s) is within the limit (172800.0s)
[2025-12-06 22:02:08] 2025-12-06 21:01:28,443 | INFO     | monitor loop #4986: job 0:6896716193 is in state 'finished'
[2025-12-06 22:02:08] 2025-12-06 21:01:28,443 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-06 22:02:08] 2025-12-06 21:01:30,074 | INFO     | time since job start (73361s) is within the limit (172800.0s)
[2025-12-06 22:02:08] 2025-12-06 21:01:30,951 | INFO     | monitor loop #4987: job 0:6896716193 is in state 'finished'
[2025-12-06 22:02:08] 2025-12-06 21:01:30,951 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-06 22:02:08] 2025-12-06 21:01:32,080 | INFO     | time since job start (73363s) is within the limit (172800.0s)
[2025-12-06 22:02:08] 2025-12-06 21:01:33,118 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-06 22:02:08] 2025-12-06 21:01:33,119 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-06 22:02:08] 2025-12-06 21:01:33,121 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6896716193/memory_monitor_summary.json (trf name=prmon)
[2025-12-06 22:02:08] 2025-12-06 21:01:33,121 | INFO     | extracted standard info from prmon json
[2025-12-06 22:02:08] 2025-12-06 21:01:33,122 | INFO     | extracted standard memory fields from prmon json
[2025-12-06 22:02:08] 2025-12-06 21:01:33,122 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-06 22:02:08] 2025-12-06 21:01:33,142 | INFO     | fitting pss+swap vs Time
[2025-12-06 22:02:08] 2025-12-06 21:01:33,144 | INFO     | sum of square deviations: 527826728207.48505
[2025-12-06 22:02:08] 2025-12-06 21:01:33,180 | INFO     | sum of deviations: 2635633217134.4146
[2025-12-06 22:02:08] 2025-12-06 21:01:33,180 | INFO     | mean x: 1765018386.5502512
[2025-12-06 22:02:08] 2025-12-06 21:01:33,180 | INFO     | mean y: 2845276.784757119
[2025-12-06 22:02:08] 2025-12-06 21:01:33,180 | INFO     | intersect: -8810541465.192026
[2025-12-06 22:02:08] 2025-12-06 21:01:33,182 | INFO     | chi2: 18.553904993016694
[2025-12-06 22:02:08] 2025-12-06 21:01:33,183 | INFO     | sum of square deviations: 521223851979.4468
[2025-12-06 22:02:08] 2025-12-06 21:01:33,219 | INFO     | sum of deviations: 3035608161438.496
[2025-12-06 22:02:08] 2025-12-06 21:01:33,219 | INFO     | mean x: 1765018234.0546677
[2025-12-06 22:02:08] 2025-12-06 21:01:33,219 | INFO     | mean y: 2854513.684608915
[2025-12-06 22:02:08] 2025-12-06 21:01:33,219 | INFO     | intersect: -10276613196.85176
[2025-12-06 22:02:08] 2025-12-06 21:01:33,221 | INFO     | chi2: 15.317261315895678
[2025-12-06 22:02:08] 2025-12-06 21:01:33,221 | INFO     | current chi2=15.317261315895678 (change=17.44454161180205 %)
[2025-12-06 22:02:08] 2025-12-06 21:01:33,221 | INFO     | right removable region: 1188
[2025-12-06 22:02:08] 2025-12-06 21:01:33,223 | INFO     | sum of square deviations: 521223087039.4469
[2025-12-06 22:02:08] 2025-12-06 21:01:33,266 | INFO     | sum of deviations: 2135716139731.3604
[2025-12-06 22:02:08] 2025-12-06 21:01:33,266 | INFO     | mean x: 1765018539.0546677
[2025-12-06 22:02:08] 2025-12-06 21:01:33,266 | INFO     | mean y: 2856820.871320437
[2025-12-06 22:02:08] 2025-12-06 21:01:33,266 | INFO     | intersect: -7229322018.702669
[2025-12-06 22:02:08] 2025-12-06 21:01:33,268 | INFO     | chi2: 13.856290500959602
[2025-12-06 22:02:08] 2025-12-06 21:01:33,268 | INFO     | current chi2=13.856290500959602 (change=25.3187374508233 %)
[2025-12-06 22:02:08] 2025-12-06 21:01:33,269 | INFO     | sum of square deviations: 514674749233.8613
[2025-12-06 22:02:08] 2025-12-06 21:01:33,305 | INFO     | sum of deviations: 1711495731495.0774
[2025-12-06 22:02:08] 2025-12-06 21:01:33,305 | INFO     | mean x: 1765018691.5591216
[2025-12-06 22:02:08] 2025-12-06 21:01:33,305 | INFO     | mean y: 2866699.534628378
[2025-12-06 22:02:08] 2025-12-06 21:01:33,305 | INFO     | intersect: -5866513838.58041
[2025-12-06 22:02:08] 2025-12-06 21:01:33,307 | INFO     | chi2: 10.60559208312281
[2025-12-06 22:02:08] 2025-12-06 21:01:33,307 | INFO     | current chi2=10.60559208312281 (change=23.46009141199565 %)
[2025-12-06 22:02:08] 2025-12-06 21:01:33,307 | INFO     | left removable region: 20
[2025-12-06 22:02:08] 2025-12-06 21:01:33,308 | INFO     | sum of square deviations: 494090488932.79095
[2025-12-06 22:02:08] 2025-12-06 21:01:33,343 | INFO     | sum of deviations: 1891494155452.0288
[2025-12-06 22:02:08] 2025-12-06 21:01:33,343 | INFO     | mean x: 1765018813.5667808
[2025-12-06 22:02:08] 2025-12-06 21:01:33,343 | INFO     | mean y: 2885473.5316780824
[2025-12-06 22:02:08] 2025-12-06 21:01:33,344 | INFO     | intersect: -6754020083.05062
[2025-12-06 22:02:08] 2025-12-06 21:01:33,345 | INFO     | chi2: 5.335852414194414
[2025-12-06 22:02:08] 2025-12-06 21:01:33,345 | INFO     | current memory leak: 3.83 B/s (using 1168 data points, chi2=5.34)
[2025-12-06 22:02:08] 2025-12-06 21:01:33,346 | INFO     | could have reported an average CPU frequency of 1999 MHz (41 samples)
[2025-12-06 22:02:08] 2025-12-06 21:01:33,346 | INFO     | ..............................
[2025-12-06 22:02:08] 2025-12-06 21:01:33,346 | INFO     | . Timing measurements:
[2025-12-06 22:02:08] 2025-12-06 21:01:33,347 | INFO     | . get job = 0 s
[2025-12-06 22:02:08] 2025-12-06 21:01:33,347 | INFO     | . initial setup = 7 s
[2025-12-06 22:02:08] 2025-12-06 21:01:33,347 | INFO     | . payload setup = 136 s
[2025-12-06 22:02:08] 2025-12-06 21:01:33,347 | INFO     | . stage-in = 0 s
[2025-12-06 22:02:08] 2025-12-06 21:01:33,347 | INFO     | . payload execution = 72951 s
[2025-12-06 22:02:08] 2025-12-06 21:01:33,347 | INFO     | . stage-out = 4 s
[2025-12-06 22:02:08] 2025-12-06 21:01:33,347 | INFO     | . log creation = 2 s
[2025-12-06 22:02:08] 2025-12-06 21:01:33,347 | INFO     | ..............................
[2025-12-06 22:02:08] 2025-12-06 21:01:33,455 | INFO     | 
[2025-12-06 22:02:08] 2025-12-06 21:01:33,456 | INFO     | job summary report
[2025-12-06 22:02:08] 2025-12-06 21:01:33,456 | INFO     | --------------------------------------------------
[2025-12-06 22:02:08] 2025-12-06 21:01:33,456 | INFO     | PanDA job id: 6896716193
[2025-12-06 22:02:08] 2025-12-06 21:01:33,456 | INFO     | task id: 47556161
[2025-12-06 22:02:08] 2025-12-06 21:01:33,456 | INFO     | errors: (none)
[2025-12-06 22:02:08] 2025-12-06 21:01:33,456 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-06 22:02:08] 2025-12-06 21:01:33,456 | INFO     | pilot state: finished 
[2025-12-06 22:02:08] 2025-12-06 21:01:33,456 | INFO     | transexitcode: 0
[2025-12-06 22:02:08] 2025-12-06 21:01:33,456 | INFO     | exeerrorcode: 0
[2025-12-06 22:02:08] 2025-12-06 21:01:33,456 | INFO     | exeerrordiag: 
[2025-12-06 22:02:08] 2025-12-06 21:01:33,456 | INFO     | exitcode: 0
[2025-12-06 22:02:08] 2025-12-06 21:01:33,456 | INFO     | exitmsg: OK
[2025-12-06 22:02:08] 2025-12-06 21:01:33,457 | INFO     | cpuconsumptiontime: 277649 s
[2025-12-06 22:02:08] 2025-12-06 21:01:33,457 | INFO     | nevents: 1000
[2025-12-06 22:02:08] 2025-12-06 21:01:33,457 | INFO     | neventsw: 0
[2025-12-06 22:02:08] 2025-12-06 21:01:33,457 | INFO     | pid: 5955
[2025-12-06 22:02:08] 2025-12-06 21:01:33,457 | INFO     | pgrp: 5955
[2025-12-06 22:02:08] 2025-12-06 21:01:33,457 | INFO     | corecount: 8
[2025-12-06 22:02:08] 2025-12-06 21:01:33,457 | INFO     | event service: False
[2025-12-06 22:02:08] 2025-12-06 21:01:33,457 | INFO     | sizes: {0: 2284043, 1: 2284242, 2: 2284242, 12: 2284270, 23: 2284298, 34: 2284326, 44: 2284482, 55: 2284510, 66: 2284538, 76: 2284566, 84: 2284884, 87: 2285192, 73
[2025-12-06 22:02:08] 2025-12-06 21:01:33,457 | INFO     | --------------------------------------------------
[2025-12-06 22:02:08] 2025-12-06 21:01:33,457 | INFO     | 
[2025-12-06 22:02:08] 2025-12-06 21:01:33,457 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-12-06 22:02:08] 2025-12-06 21:01:33,478 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-06 22:02:08] 2025-12-06 21:01:33,478 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-06 22:02:08] 2025-12-06 21:01:33,478 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-06 22:02:08] 2025-12-06 21:01:33,478 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-06 22:02:08] 2025-12-06 21:01:33,478 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-06 22:02:08] 2025-12-06 21:01:33,478 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-06 22:02:08] 2025-12-06 21:01:33,478 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-06 22:02:08] 2025-12-06 21:01:33,479 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-06 22:02:08] 2025-12-06 21:01:33,479 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-06 22:02:08] 2025-12-06 21:01:33,479 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-06 22:02:08] 2025-12-06 21:01:33,479 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-06 22:02:08] 2025-12-06 21:01:33,479 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-06 22:02:08] 2025-12-06 21:01:33,479 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-06 22:02:08] 2025-12-06 21:01:33,479 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-06 22:02:08] 2025-12-06 21:01:33,479 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-06 22:02:08] 2025-12-06 21:01:33,479 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-06 22:02:08] 2025-12-06 21:01:33,479 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-06 22:02:08] 2025-12-06 21:01:33,479 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-06 22:02:08] 2025-12-06 21:01:33,479 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-06 22:02:08] 2025-12-06 21:01:33,480 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-06 22:02:08] 2025-12-06 21:01:33,480 | INFO     | job 6896716193 has completed (purged errors)
[2025-12-06 22:02:08] 2025-12-06 21:01:33,480 | INFO     | overall cleanup function is called
[2025-12-06 22:02:08] 2025-12-06 21:01:34,496 | INFO     | --- collectZombieJob: --- 10, [5955]
[2025-12-06 22:02:08] 2025-12-06 21:01:34,496 | INFO     | zombie collector waiting for pid 5955
[2025-12-06 22:02:08] 2025-12-06 21:01:34,497 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-06 22:02:08] 2025-12-06 21:01:34,497 | INFO     | collected zombie processes
[2025-12-06 22:02:08] 2025-12-06 21:01:34,497 | INFO     | will attempt to kill all subprocesses of pid=5955
[2025-12-06 22:02:08] 2025-12-06 21:01:34,591 | INFO     | process IDs to be killed: [5955] (in reverse order)
[2025-12-06 22:02:08] 2025-12-06 21:01:34,714 | WARNING  | found no corresponding commands to process id(s)
[2025-12-06 22:02:08] 2025-12-06 21:01:34,714 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-06 22:02:08] 2025-12-06 21:01:34,717 | INFO     | did not find any defunct processes belonging to 5955
[2025-12-06 22:02:08] 2025-12-06 21:01:34,720 | INFO     | did not find any defunct processes belonging to 5955
[2025-12-06 22:02:08] 2025-12-06 21:01:34,722 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-06 22:02:08] 2025-12-06 21:01:34,722 | INFO     | ready for new job
[2025-12-06 22:02:08] 2025-12-06 21:01:34,722 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-06 22:02:08] 2025-12-06 21:01:34,727 | INFO     | ***************************************
[2025-12-06 22:02:08] 2025-12-06 21:01:34,727 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-06 22:02:08] 2025-12-06 21:01:34,727 | INFO     | ***************************************
[2025-12-06 22:02:08] 2025-12-06 21:01:34,727 | INFO     | 
[2025-12-06 22:02:08] 2025-12-06 21:01:34,728 | INFO     | pilot is running in a VM
[2025-12-06 22:02:08] 2025-12-06 21:01:34,728 | INFO     | architecture information:
[2025-12-06 22:02:08] 2025-12-06 21:01:34,729 | INFO     | executing command: cat /etc/os-release
[2025-12-06 22:02:08] 2025-12-06 21:01:34,747 | INFO     | cat /etc/os-release:
[2025-12-06 22:02:08] NAME="CentOS Linux"
[2025-12-06 22:02:08] VERSION="7 (Core)"
[2025-12-06 22:02:08] ID="centos"
[2025-12-06 22:02:08] ID_LIKE="rhel fedora"
[2025-12-06 22:02:08] VERSION_ID="7"
[2025-12-06 22:02:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-06 22:02:08] ANSI_COLOR="0;31"
[2025-12-06 22:02:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-06 22:02:08] HOME_URL="https://www.centos.org/"
[2025-12-06 22:02:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-06 22:02:08] 
[2025-12-06 22:02:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-06 22:02:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-06 22:02:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-06 22:02:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-06 22:02:08] 
[2025-12-06 22:02:08] 2025-12-06 21:01:34,747 | INFO     | ***************************************
[2025-12-06 22:02:08] 2025-12-06 21:01:35,250 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-12-06 22:02:08] 2025-12-06 21:01:35,450 | INFO     | sufficient remaining disk space (493047775232 B)
[2025-12-06 22:02:08] 2025-12-06 21:01:35,450 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-06 22:02:08] 2025-12-06 21:01:35,450 | INFO     | current server update state: UPDATING_FINAL
[2025-12-06 22:02:08] 2025-12-06 21:01:35,450 | INFO     | update_server=False
[2025-12-06 22:02:08] 2025-12-06 21:01:35,450 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-06 22:02:08] 2025-12-06 21:01:35,451 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-06 22:02:08] 2025-12-06 21:01:35,451 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-06 22:02:08] 2025-12-06 21:01:35,451 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-06 22:02:08] 2025-12-06 21:01:35,451 | INFO     | aborting loop
[2025-12-06 22:02:08] 2025-12-06 21:01:35,673 | INFO     | all data control threads have been joined
[2025-12-06 22:02:08] 2025-12-06 21:01:35,734 | INFO     | all job control threads have been joined
[2025-12-06 22:02:08] 2025-12-06 21:01:36,005 | INFO     | all payload control threads have been joined
[2025-12-06 22:02:08] 2025-12-06 21:01:36,456 | INFO     | [job] retrieve thread has finished
[2025-12-06 22:02:08] 2025-12-06 21:01:36,457 | INFO     | [job] queue monitor thread has finished
[2025-12-06 22:02:08] 2025-12-06 21:01:36,457 | INFO     | [job] job monitor thread has finished
[2025-12-06 22:02:08] 2025-12-06 21:01:36,579 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-06 22:02:08] 2025-12-06 21:01:36,597 | INFO     | [payload] validate_post thread has finished
[2025-12-06 22:02:08] 2025-12-06 21:01:36,679 | INFO     | [data] control thread has finished
[2025-12-06 22:02:08] 2025-12-06 21:01:36,740 | INFO     | [job] control thread has finished
[2025-12-06 22:02:08] 2025-12-06 21:01:36,915 | INFO     | [data] copytool_in thread has finished
[2025-12-06 22:02:08] 2025-12-06 21:01:36,942 | INFO     | [job] validate thread has finished
[2025-12-06 22:02:08] 2025-12-06 21:01:36,996 | INFO     | [payload] validate_pre thread has finished
[2025-12-06 22:02:08] 2025-12-06 21:01:37,011 | INFO     | [payload] control thread has finished
[2025-12-06 22:02:08] 2025-12-06 21:01:37,457 | INFO     | [data] copytool_out thread has finished
[2025-12-06 22:02:08] 2025-12-06 21:01:37,477 | INFO     | [payload] execute_payloads thread has finished
[2025-12-06 22:02:08] 2025-12-06 21:01:37,541 | INFO     | [payload] failed_post thread has finished
[2025-12-06 22:02:08] 2025-12-06 21:01:37,923 | INFO     | [job] create_data_payload thread has finished
[2025-12-06 22:02:08] 2025-12-06 21:01:38,741 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-06 22:02:08] 2025-12-06 21:01:42,750 | INFO     | [data] queue_monitor thread has finished
[2025-12-06 22:02:08] 2025-12-06 21:01:56,705 | INFO     | [monitor] cgroup control has ended
[2025-12-06 22:02:08] 2025-12-06 21:01:56,999 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140670746072896)>', '<ExcThread(monitor, started 140670152984320)>']
[2025-12-06 22:02:08] 2025-12-06 21:02:02,025 | INFO     | all workflow threads have been joined
[2025-12-06 22:02:08] 2025-12-06 21:02:02,025 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-06 22:02:08] 2025-12-06 21:02:02,026 | INFO     | traces error code: 0
[2025-12-06 22:02:08] 2025-12-06 21:02:02,026 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-06 22:02:08] 2025-12-06 21:02:05,239 | INFO     | PID=31784 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-06 22:02:08] 2025-12-06 21:02:05,240 | INFO     | .. there are 9 such processes running
[2025-12-06 22:02:08] 2025-12-06 21:02:05,240 | INFO     | found 0 job(s) in 20 queues
[2025-12-06 22:02:08] 2025-12-06 21:02:05,240 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-06 22:02:08] 2025-12-06 21:02:05,240 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-06 22:02:08] 2025-12-06 21:02:05,240 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-06 22:02:08] 2025-12-06 21:02:05,240 | INFO     | [monitor] control thread has ended
[2025-12-06 22:02:08] 2025-12-06 21:02:05,366 [wrapper] ==== pilot stdout END ====
[2025-12-06 22:02:08] 2025-12-06 21:02:05,377 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-06 22:02:08] 2025-12-06 21:02:05,424 [wrapper] pilotpid: 31784
[2025-12-06 22:02:08] 2025-12-06 21:02:05,490 [wrapper] Pilot exit status: 0
[2025-12-06 22:02:08] 2025-12-06 21:02:05,759 [wrapper] pandaids: 6896716193
[2025-12-06 22:02:08] 2025-12-06 21:02:05,834 [wrapper] cleanup supervisor_pilot 26093 31785
[2025-12-06 22:02:08] 2025-12-06 21:02:05,938 [wrapper] Test setup, not cleaning
[2025-12-06 22:02:08] 2025-12-06 21:02:06,049 [wrapper] apfmon messages muted
[2025-12-06 22:02:08] 2025-12-06 21:02:06,143 [wrapper] ==== wrapper stdout END ====
[2025-12-06 22:02:08] 2025-12-06 21:02:06,230 [wrapper] ==== wrapper stderr END ====
[2025-12-06 22:02:08]  *** Error codes and diagnostics ***
[2025-12-06 22:02:08]     "exeErrorCode": 0,
[2025-12-06 22:02:08]     "exeErrorDiag": "",
[2025-12-06 22:02:08]     "pilotErrorCode": 0,
[2025-12-06 22:02:08]     "pilotErrorDiag": "",
[2025-12-06 22:02:08]  *** Listing of results directory ***
[2025-12-06 22:02:08] total 1322480
[2025-12-06 22:02:08] -rw-r--r--. 1 boinc boinc    576529 Nov 25 09:00 pilot3.tar.gz
[2025-12-06 22:02:08] -rwx------. 1 boinc boinc     36292 Nov 25 09:06 runpilot2-wrapper.sh
[2025-12-06 22:02:08] -rw-r--r--. 1 boinc boinc      5112 Nov 25 09:06 queuedata.json
[2025-12-06 22:02:08] -rw-r--r--. 1 boinc boinc       100 Dec  6 01:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-06 22:02:08] -rwxr-xr-x. 1 boinc boinc      7986 Dec  6 01:34 run_atlas
[2025-12-06 22:02:08] -rw-r--r--. 1 boinc boinc       105 Dec  6 01:34 job.xml
[2025-12-06 22:02:08] drwxrwx--x. 2 boinc boinc        68 Dec  6 01:34 shared
[2025-12-06 22:02:08] -rw-r--r--. 2 boinc boinc    590099 Dec  6 01:34 input.tar.gz
[2025-12-06 22:02:08] -rw-r--r--. 1 boinc boinc      6393 Dec  6 01:34 init_data.xml
[2025-12-06 22:02:08] -rw-r--r--. 2 boinc boinc 411537075 Dec  6 01:34 EVNT.47483658._002137.pool.root.1
[2025-12-06 22:02:08] -rw-r--r--. 2 boinc boinc     15847 Dec  6 01:34 start_atlas.sh
[2025-12-06 22:02:08] -rw-r--r--. 1 boinc boinc         0 Dec  6 01:34 boinc_lockfile
[2025-12-06 22:02:08] -rw-r--r--. 1 boinc boinc      2784 Dec  6 01:35 pandaJob.out
[2025-12-06 22:02:08] -rw-------. 1 boinc boinc    985868 Dec  6 01:38 agis_schedconf.cvmfs.json
[2025-12-06 22:02:08] drwx------. 5 boinc boinc      4096 Dec  6 01:38 pilot3
[2025-12-06 22:02:08] -rw-r--r--. 1 boinc boinc       533 Dec  6 21:44 boinc_task_state.xml
[2025-12-06 22:02:08] -rw-------. 1 boinc boinc 914550530 Dec  6 21:58 HITS.47556161._001207.pool.root.1
[2025-12-06 22:02:08] -rw-------. 1 boinc boinc      1023 Dec  6 21:59 memory_monitor_summary.json
[2025-12-06 22:02:08] -rw-------. 1 boinc boinc   1516240 Dec  6 21:59 agis_ddmendpoints.agis.ALL.json
[2025-12-06 22:02:08] -rw-------. 1 boinc boinc   2313101 Dec  6 21:59 log.47556161._001207.job.log.tgz.1
[2025-12-06 22:02:08] -rw-------. 1 boinc boinc        95 Dec  6 22:01 pilot_heartbeat.json
[2025-12-06 22:02:08] -rw-------. 1 boinc boinc      7945 Dec  6 22:01 heartbeat.json
[2025-12-06 22:02:08] -rw-r--r--. 1 boinc boinc        29 Dec  6 22:01 wrapper_checkpoint.txt
[2025-12-06 22:02:08] -rw-r--r--. 1 boinc boinc      8192 Dec  6 22:01 boinc_mmap_file
[2025-12-06 22:02:08] -rw-------. 1 boinc boinc       820 Dec  6 22:02 pilotlog.txt
[2025-12-06 22:02:08] -rw-------. 1 boinc boinc   9809238 Dec  6 22:02 log.47556161._001207.job.log.1
[2025-12-06 22:02:08] -rw-------. 1 boinc boinc       353 Dec  6 22:02 output.list
[2025-12-06 22:02:08] -rw-r--r--. 1 boinc boinc       620 Dec  6 22:02 runtime_log
[2025-12-06 22:02:08] -rw-------. 1 boinc boinc  12144640 Dec  6 22:02 result.tar.gz
[2025-12-06 22:02:08] -rw-------. 1 boinc boinc       661 Dec  6 22:02 XBkMDmSF3h8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmMOJKDmOhfppm.diag
[2025-12-06 22:02:08] -rw-r--r--. 1 boinc boinc      8833 Dec  6 22:02 runtime_log.err
[2025-12-06 22:02:08] -rw-r--r--. 1 boinc boinc     21163 Dec  6 22:02 stderr.txt
[2025-12-06 22:02:08] HITS file was successfully produced:
[2025-12-06 22:02:08] -rw-------. 1 boinc boinc 914550530 Dec  6 21:58 shared/HITS.pool.root.1
[2025-12-06 22:02:08]  *** Contents of shared directory: ***
[2025-12-06 22:02:08] total 1307464
[2025-12-06 22:02:08] -rw-r--r--. 2 boinc boinc    590099 Dec  6 01:34 input.tar.gz
[2025-12-06 22:02:08] -rw-r--r--. 2 boinc boinc 411537075 Dec  6 01:34 ATLAS.root_0
[2025-12-06 22:02:08] -rw-r--r--. 2 boinc boinc     15847 Dec  6 01:34 start_atlas.sh
[2025-12-06 22:02:08] -rw-------. 1 boinc boinc 914550530 Dec  6 21:58 HITS.pool.root.1
[2025-12-06 22:02:08] -rw-------. 1 boinc boinc  12144640 Dec  6 22:02 result.tar.gz
22:02:10 (27994): run_atlas exited; CPU time 277994.952074
22:02:10 (27994): called boinc_finish(0)

</stderr_txt>
]]>

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