Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:33:16 (2683906): wrapper (7.7.26015): starting
04:33:16 (2683906): wrapper: running run_atlas (--nthreads 4)
[2025-12-07 04:33:16] Arguments: --nthreads 4
[2025-12-07 04:33:16] Threads: 4
[2025-12-07 04:33:16] Checking for CVMFS
[2025-12-07 04:33:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-07 04:33:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-07 04:33:16] Running cvmfs_config stat atlas.cern.ch
[2025-12-07 04:33:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-07 04:33:16] 2.9.2.0 3110611 26369 94404 153713 2 81 28066712 36864001 0 130560 0 10444115 99.965 1069179 1940 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-07 04:33:16] CVMFS is ok
[2025-12-07 04:33:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-07 04:33:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-07 04:33:16] Further information can be found at the LHC@home message board.
[2025-12-07 04:33:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-07 04:33:16] Checking for apptainer binary...
[2025-12-07 04:33:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-07 04:33:16] Running /usr/bin/apptainer --version
[2025-12-07 04:33:16] apptainer version 1.4.1-1.1
[2025-12-07 04:33:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-07 04:33:16] thA352
[2025-12-07 04:33:16] apptainer works
[2025-12-07 04:33:16] Set ATHENA_PROC_NUMBER=4
[2025-12-07 04:33:16] Set ATHENA_CORE_NUMBER=4
[2025-12-07 04:33:16] Starting ATLAS job with PandaID=6897863957
[2025-12-07 04:33:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-07 11:31:17]  *** The last 200 lines of the pilot log: ***
[2025-12-07 11:31:17] 2025-12-07 10:30:44,960 | INFO     | extracted standard info from prmon json
[2025-12-07 11:31:17] 2025-12-07 10:30:44,960 | INFO     | extracted standard memory fields from prmon json
[2025-12-07 11:31:17] 2025-12-07 10:30:44,960 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-07 11:31:17] 2025-12-07 10:30:44,963 | INFO     | fitting pss+swap vs Time
[2025-12-07 11:31:17] 2025-12-07 10:30:44,963 | INFO     | sum of square deviations: 21371126282.5
[2025-12-07 11:31:17] 2025-12-07 10:30:44,965 | INFO     | sum of deviations: 259580856466.50003
[2025-12-07 11:31:17] 2025-12-07 10:30:44,965 | INFO     | mean x: 1765090902.5
[2025-12-07 11:31:17] 2025-12-07 10:30:44,965 | INFO     | mean y: 2370702.4024390243
[2025-12-07 11:31:17] 2025-12-07 10:30:44,965 | INFO     | intersect: -21437014482.802643
[2025-12-07 11:31:17] 2025-12-07 10:30:44,965 | INFO     | chi2: 3.79945454620495
[2025-12-07 11:31:17] 2025-12-07 10:30:44,965 | INFO     | sum of square deviations: 20598749010.0
[2025-12-07 11:31:17] 2025-12-07 10:30:44,967 | INFO     | sum of deviations: 305162269028.0
[2025-12-07 11:31:17] 2025-12-07 10:30:44,967 | INFO     | mean x: 1765090750.0
[2025-12-07 11:31:17] 2025-12-07 10:30:44,967 | INFO     | mean y: 2379645.0419753087
[2025-12-07 11:31:17] 2025-12-07 10:30:44,967 | INFO     | intersect: -26146737374.0956
[2025-12-07 11:31:17] 2025-12-07 10:30:44,967 | INFO     | chi2: 2.785058808838587
[2025-12-07 11:31:17] 2025-12-07 10:30:44,967 | INFO     | current chi2=2.785058808838587 (change=26.69845697666216 %)
[2025-12-07 11:31:17] 2025-12-07 10:30:44,967 | INFO     | sum of square deviations: 19845209300.0
[2025-12-07 11:31:17] 2025-12-07 10:30:44,969 | INFO     | sum of deviations: 298083313242.5
[2025-12-07 11:31:17] 2025-12-07 10:30:44,969 | INFO     | mean x: 1765090597.5
[2025-12-07 11:31:17] 2025-12-07 10:30:44,969 | INFO     | mean y: 2378212.6625
[2025-12-07 11:31:17] 2025-12-07 10:30:44,969 | INFO     | intersect: -26510018080.17902
[2025-12-07 11:31:17] 2025-12-07 10:30:44,969 | INFO     | chi2: 2.784058376759143
[2025-12-07 11:31:17] 2025-12-07 10:30:44,969 | INFO     | current chi2=2.784058376759143 (change=0.035921398724837315 %)
[2025-12-07 11:31:17] 2025-12-07 10:30:44,969 | INFO     | right removable region: 399
[2025-12-07 11:31:17] 2025-12-07 10:30:44,969 | INFO     | sum of square deviations: 20598749010.0
[2025-12-07 11:31:17] 2025-12-07 10:30:44,971 | INFO     | sum of deviations: 161363662827.99994
[2025-12-07 11:31:17] 2025-12-07 10:30:44,971 | INFO     | mean x: 1765091055.0
[2025-12-07 11:31:17] 2025-12-07 10:30:44,971 | INFO     | mean y: 2390064.4567901236
[2025-12-07 11:31:17] 2025-12-07 10:30:44,971 | INFO     | intersect: -13824738841.355276
[2025-12-07 11:31:17] 2025-12-07 10:30:44,971 | INFO     | chi2: 1.5030733445857303
[2025-12-07 11:31:17] 2025-12-07 10:30:44,971 | INFO     | current chi2=1.5030733445857303 (change=60.43975980481038 %)
[2025-12-07 11:31:17] 2025-12-07 10:30:44,971 | INFO     | sum of square deviations: 19845209300.0
[2025-12-07 11:31:17] 2025-12-07 10:30:44,973 | INFO     | sum of deviations: 124471179875.50005
[2025-12-07 11:31:17] 2025-12-07 10:30:44,973 | INFO     | mean x: 1765091207.5
[2025-12-07 11:31:17] 2025-12-07 10:30:44,973 | INFO     | mean y: 2397496.4475
[2025-12-07 11:31:17] 2025-12-07 10:30:44,973 | INFO     | intersect: -11068434857.30329
[2025-12-07 11:31:17] 2025-12-07 10:30:44,973 | INFO     | chi2: 1.092792063146701
[2025-12-07 11:31:17] 2025-12-07 10:30:44,973 | INFO     | current chi2=1.092792063146701 (change=27.296158428789717 %)
[2025-12-07 11:31:17] 2025-12-07 10:30:44,973 | INFO     | sum of square deviations: 19110274590.0
[2025-12-07 11:31:17] 2025-12-07 10:30:44,975 | INFO     | sum of deviations: 114143436801.99998
[2025-12-07 11:31:17] 2025-12-07 10:30:44,975 | INFO     | mean x: 1765091360.0
[2025-12-07 11:31:17] 2025-12-07 10:30:44,975 | INFO     | mean y: 2399638.529113924
[2025-12-07 11:31:17] 2025-12-07 10:30:44,975 | INFO     | intersect: -10540284777.18007
[2025-12-07 11:31:17] 2025-12-07 10:30:44,975 | INFO     | chi2: 1.0862508560334483
[2025-12-07 11:31:17] 2025-12-07 10:30:44,975 | INFO     | current chi2=1.0862508560334483 (change=0.5985774726819698 %)
[2025-12-07 11:31:17] 2025-12-07 10:30:44,975 | INFO     | left removable region: 30
[2025-12-07 11:31:17] 2025-12-07 10:30:44,975 | INFO     | sum of square deviations: 15579529320.0
[2025-12-07 11:31:17] 2025-12-07 10:30:44,976 | INFO     | sum of deviations: 130555220415.0
[2025-12-07 11:31:17] 2025-12-07 10:30:44,976 | INFO     | mean x: 1765091482.0
[2025-12-07 11:31:17] 2025-12-07 10:30:44,976 | INFO     | mean y: 2413413.295392954
[2025-12-07 11:31:17] 2025-12-07 10:30:44,976 | INFO     | intersect: -14788913253.378836
[2025-12-07 11:31:17] 2025-12-07 10:30:44,977 | INFO     | chi2: 0.06047658540522537
[2025-12-07 11:31:17] 2025-12-07 10:30:44,977 | INFO     | current memory leak: 8.38 B/s (using 369 data points, chi2=0.06)
[2025-12-07 11:31:17] 2025-12-07 10:30:44,977 | INFO     | could have reported an average CPU frequency of 3822 MHz (17 samples)
[2025-12-07 11:31:17] 2025-12-07 10:30:44,977 | INFO     | ..............................
[2025-12-07 11:31:17] 2025-12-07 10:30:44,977 | INFO     | . Timing measurements:
[2025-12-07 11:31:17] 2025-12-07 10:30:44,977 | INFO     | . get job = 0 s
[2025-12-07 11:31:17] 2025-12-07 10:30:44,977 | INFO     | . initial setup = 1 s
[2025-12-07 11:31:17] 2025-12-07 10:30:44,977 | INFO     | . payload setup = 4 s
[2025-12-07 11:31:17] 2025-12-07 10:30:44,977 | INFO     | . stage-in = 0 s
[2025-12-07 11:31:17] 2025-12-07 10:30:44,977 | INFO     | . payload execution = 25009 s
[2025-12-07 11:31:17] 2025-12-07 10:30:44,977 | INFO     | . stage-out = 1 s
[2025-12-07 11:31:17] 2025-12-07 10:30:44,977 | INFO     | . log creation = 0 s
[2025-12-07 11:31:17] 2025-12-07 10:30:44,977 | INFO     | ..............................
[2025-12-07 11:31:17] 2025-12-07 10:30:45,017 | INFO     | 
[2025-12-07 11:31:17] 2025-12-07 10:30:45,017 | INFO     | job summary report
[2025-12-07 11:31:17] 2025-12-07 10:30:45,017 | INFO     | --------------------------------------------------
[2025-12-07 11:31:17] 2025-12-07 10:30:45,017 | INFO     | PanDA job id: 6897863957
[2025-12-07 11:31:17] 2025-12-07 10:30:45,017 | INFO     | task id: 47556161
[2025-12-07 11:31:17] 2025-12-07 10:30:45,017 | INFO     | errors: (none)
[2025-12-07 11:31:17] 2025-12-07 10:30:45,017 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-07 11:31:17] 2025-12-07 10:30:45,017 | INFO     | pilot state: finished 
[2025-12-07 11:31:17] 2025-12-07 10:30:45,017 | INFO     | transexitcode: 0
[2025-12-07 11:31:17] 2025-12-07 10:30:45,017 | INFO     | exeerrorcode: 0
[2025-12-07 11:31:17] 2025-12-07 10:30:45,017 | INFO     | exeerrordiag: 
[2025-12-07 11:31:17] 2025-12-07 10:30:45,017 | INFO     | exitcode: 0
[2025-12-07 11:31:17] 2025-12-07 10:30:45,017 | INFO     | exitmsg: OK
[2025-12-07 11:31:17] 2025-12-07 10:30:45,017 | INFO     | cpuconsumptiontime: 98047 s
[2025-12-07 11:31:17] 2025-12-07 10:30:45,017 | INFO     | nevents: 1000
[2025-12-07 11:31:17] 2025-12-07 10:30:45,017 | INFO     | neventsw: 0
[2025-12-07 11:31:17] 2025-12-07 10:30:45,017 | INFO     | pid: 2694267
[2025-12-07 11:31:17] 2025-12-07 10:30:45,018 | INFO     | pgrp: 2694267
[2025-12-07 11:31:17] 2025-12-07 10:30:45,018 | INFO     | corecount: 4
[2025-12-07 11:31:17] 2025-12-07 10:30:45,018 | INFO     | event service: False
[2025-12-07 11:31:17] 2025-12-07 10:30:45,018 | INFO     | sizes: {0: 2284091, 1: 2284290, 4: 2284552, 11: 2284580, 25017: 2321638, 25018: 2330638, 25020: 2330822, 25026: 2331132}
[2025-12-07 11:31:17] 2025-12-07 10:30:45,018 | INFO     | --------------------------------------------------
[2025-12-07 11:31:17] 2025-12-07 10:30:45,018 | INFO     | 
[2025-12-07 11:31:17] 2025-12-07 10:30:45,018 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-07 11:31:17] 2025-12-07 10:30:45,037 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-07 11:31:17] 2025-12-07 10:30:45,037 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-07 11:31:17] 2025-12-07 10:30:45,037 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-07 11:31:17] 2025-12-07 10:30:45,037 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-07 11:31:17] 2025-12-07 10:30:45,037 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-07 11:31:17] 2025-12-07 10:30:45,037 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-07 11:31:17] 2025-12-07 10:30:45,037 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-07 11:31:17] 2025-12-07 10:30:45,037 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-07 11:31:17] 2025-12-07 10:30:45,037 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-07 11:31:17] 2025-12-07 10:30:45,037 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-07 11:31:17] 2025-12-07 10:30:45,037 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-07 11:31:17] 2025-12-07 10:30:45,038 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-07 11:31:17] 2025-12-07 10:30:45,038 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-07 11:31:17] 2025-12-07 10:30:45,038 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-07 11:31:17] 2025-12-07 10:30:45,038 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-07 11:31:17] 2025-12-07 10:30:45,038 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-07 11:31:17] 2025-12-07 10:30:45,038 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-07 11:31:17] 2025-12-07 10:30:45,038 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-07 11:31:17] 2025-12-07 10:30:45,038 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-07 11:31:17] 2025-12-07 10:30:45,038 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-07 11:31:17] 2025-12-07 10:30:45,038 | INFO     | job 6897863957 has completed (purged errors)
[2025-12-07 11:31:17] 2025-12-07 10:30:45,038 | INFO     | overall cleanup function is called
[2025-12-07 11:31:17] 2025-12-07 10:30:46,047 | INFO     | --- collectZombieJob: --- 10, [2694267]
[2025-12-07 11:31:17] 2025-12-07 10:30:46,048 | INFO     | zombie collector waiting for pid 2694267
[2025-12-07 11:31:17] 2025-12-07 10:30:46,048 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-07 11:31:17] 2025-12-07 10:30:46,048 | INFO     | collected zombie processes
[2025-12-07 11:31:17] 2025-12-07 10:30:46,048 | INFO     | will attempt to kill all subprocesses of pid=2694267
[2025-12-07 11:31:17] 2025-12-07 10:30:46,093 | INFO     | process IDs to be killed: [2694267] (in reverse order)
[2025-12-07 11:31:17] 2025-12-07 10:30:46,126 | WARNING  | found no corresponding commands to process id(s)
[2025-12-07 11:31:17] 2025-12-07 10:30:46,127 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-07 11:31:17] 2025-12-07 10:30:46,128 | INFO     | did not find any defunct processes belonging to 2694267
[2025-12-07 11:31:17] 2025-12-07 10:30:46,130 | INFO     | did not find any defunct processes belonging to 2694267
[2025-12-07 11:31:17] 2025-12-07 10:30:46,130 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-07 11:31:17] 2025-12-07 10:30:46,130 | INFO     | ready for new job
[2025-12-07 11:31:17] 2025-12-07 10:30:46,130 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-07 11:31:17] 2025-12-07 10:30:46,132 | INFO     | ***************************************
[2025-12-07 11:31:17] 2025-12-07 10:30:46,132 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-07 11:31:17] 2025-12-07 10:30:46,132 | INFO     | ***************************************
[2025-12-07 11:31:17] 2025-12-07 10:30:46,132 | INFO     | 
[2025-12-07 11:31:17] 2025-12-07 10:30:46,132 | INFO     | architecture information:
[2025-12-07 11:31:17] 2025-12-07 10:30:46,133 | INFO     | executing command: cat /etc/os-release
[2025-12-07 11:31:17] 2025-12-07 10:30:46,147 | INFO     | cat /etc/os-release:
[2025-12-07 11:31:17] NAME="CentOS Linux"
[2025-12-07 11:31:17] VERSION="7 (Core)"
[2025-12-07 11:31:17] ID="centos"
[2025-12-07 11:31:17] ID_LIKE="rhel fedora"
[2025-12-07 11:31:17] VERSION_ID="7"
[2025-12-07 11:31:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-07 11:31:17] ANSI_COLOR="0;31"
[2025-12-07 11:31:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-07 11:31:17] HOME_URL="https://www.centos.org/"
[2025-12-07 11:31:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-07 11:31:17] 
[2025-12-07 11:31:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-07 11:31:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-07 11:31:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-07 11:31:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-07 11:31:17] 
[2025-12-07 11:31:17] 2025-12-07 10:30:46,147 | INFO     | ***************************************
[2025-12-07 11:31:17] 2025-12-07 10:30:46,651 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-07 11:31:17] 2025-12-07 10:30:46,668 | INFO     | sufficient remaining disk space (232039383040 B)
[2025-12-07 11:31:17] 2025-12-07 10:30:46,668 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-07 11:31:17] 2025-12-07 10:30:46,669 | INFO     | current server update state: UPDATING_FINAL
[2025-12-07 11:31:17] 2025-12-07 10:30:46,669 | INFO     | update_server=False
[2025-12-07 11:31:17] 2025-12-07 10:30:46,669 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-07 11:31:17] 2025-12-07 10:30:46,669 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-07 11:31:17] 2025-12-07 10:30:46,669 | INFO     | aborting loop
[2025-12-07 11:31:17] 2025-12-07 10:30:46,669 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-07 11:31:17] 2025-12-07 10:30:46,946 | INFO     | all payload control threads have been joined
[2025-12-07 11:31:17] 2025-12-07 10:30:47,515 | INFO     | all data control threads have been joined
[2025-12-07 11:31:17] 2025-12-07 10:30:47,674 | INFO     | [job] retrieve thread has finished
[2025-12-07 11:31:17] 2025-12-07 10:30:47,675 | INFO     | [job] job monitor thread has finished
[2025-12-07 11:31:17] 2025-12-07 10:30:47,675 | INFO     | [job] queue monitor thread has finished
[2025-12-07 11:31:17] 2025-12-07 10:30:47,748 | INFO     | all job control threads have been joined
[2025-12-07 11:31:17] 2025-12-07 10:30:47,776 | INFO     | [payload] execute_payloads thread has finished
[2025-12-07 11:31:17] 2025-12-07 10:30:47,778 | INFO     | [job] validate thread has finished
[2025-12-07 11:31:17] 2025-12-07 10:30:47,952 | INFO     | [payload] control thread has finished
[2025-12-07 11:31:17] 2025-12-07 10:30:48,038 | INFO     | [payload] validate_pre thread has finished
[2025-12-07 11:31:17] 2025-12-07 10:30:48,084 | INFO     | [job] create_data_payload thread has finished
[2025-12-07 11:31:17] 2025-12-07 10:30:48,110 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-07 11:31:17] 2025-12-07 10:30:48,521 | INFO     | [data] control thread has finished
[2025-12-07 11:31:17] 2025-12-07 10:30:48,521 | INFO     | [payload] validate_post thread has finished
[2025-12-07 11:31:17] 2025-12-07 10:30:48,575 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-07 11:31:17] 2025-12-07 10:30:48,754 | INFO     | [job] control thread has finished
[2025-12-07 11:31:17] 2025-12-07 10:30:48,836 | INFO     | [data] copytool_in thread has finished
[2025-12-07 11:31:17] 2025-12-07 10:30:49,138 | INFO     | [payload] failed_post thread has finished
[2025-12-07 11:31:17] 2025-12-07 10:30:50,041 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-07 11:31:17] 2025-12-07 10:30:50,117 | INFO     | [data] copytool_out thread has finished
[2025-12-07 11:31:17] 2025-12-07 10:30:54,048 | INFO     | [data] queue_monitor thread has finished
[2025-12-07 11:31:17] 2025-12-07 10:30:55,833 | INFO     | [monitor] cgroup control has ended
[2025-12-07 11:31:17] 2025-12-07 10:30:56,363 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140349803251520)>', '<ExcThread(monitor, started 140348718311168)>']
[2025-12-07 11:31:17] 2025-12-07 10:31:01,388 | INFO     | all workflow threads have been joined
[2025-12-07 11:31:17] 2025-12-07 10:31:01,389 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-07 11:31:17] 2025-12-07 10:31:01,389 | INFO     | traces error code: 0
[2025-12-07 11:31:17] 2025-12-07 10:31:01,389 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-07 11:31:17] 2025-12-07 10:31:16,956 | INFO     | PID=2687700 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-07 11:31:17] 2025-12-07 10:31:16,957 | INFO     | found 0 job(s) in 20 queues
[2025-12-07 11:31:17] 2025-12-07 10:31:16,957 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-07 11:31:17] 2025-12-07 10:31:16,957 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-07 11:31:17] 2025-12-07 10:31:16,957 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-07 11:31:17] 2025-12-07 10:31:16,957 | INFO     | [monitor] control thread has ended
[2025-12-07 11:31:17] 2025-12-07 10:31:17,035 [wrapper] ==== pilot stdout END ====
[2025-12-07 11:31:17] 2025-12-07 10:31:17,039 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-07 11:31:17] 2025-12-07 10:31:17,043 [wrapper] pilotpid: 2687700
[2025-12-07 11:31:17] 2025-12-07 10:31:17,047 [wrapper] Pilot exit status: 0
[2025-12-07 11:31:17] 2025-12-07 10:31:17,058 [wrapper] pandaids: 6897863957
[2025-12-07 11:31:17] 2025-12-07 10:31:17,080 [wrapper] cleanup supervisor_pilot 2739097 2687701
[2025-12-07 11:31:17] 2025-12-07 10:31:17,084 [wrapper] Test setup, not cleaning
[2025-12-07 11:31:17] 2025-12-07 10:31:17,088 [wrapper] apfmon messages muted
[2025-12-07 11:31:17] 2025-12-07 10:31:17,092 [wrapper] ==== wrapper stdout END ====
[2025-12-07 11:31:17] 2025-12-07 10:31:17,096 [wrapper] ==== wrapper stderr END ====
[2025-12-07 11:31:17]  *** Error codes and diagnostics ***
[2025-12-07 11:31:17]     "exeErrorCode": 0,
[2025-12-07 11:31:17]     "exeErrorDiag": "",
[2025-12-07 11:31:17]     "pilotErrorCode": 0,
[2025-12-07 11:31:17]     "pilotErrorDiag": "",
[2025-12-07 11:31:17]  *** Listing of results directory ***
[2025-12-07 11:31:17] total 1315204
[2025-12-07 11:31:17] -rw-r--r-- 1 boinc boinc    576529 Nov 25 17:48 pilot3.tar.gz
[2025-12-07 11:31:17] -rwx------ 1 boinc boinc     36292 Nov 25 18:01 runpilot2-wrapper.sh
[2025-12-07 11:31:17] -rw-r--r-- 1 boinc boinc      5112 Nov 25 18:02 queuedata.json
[2025-12-07 11:31:17] -rw-r--r-- 1 boinc boinc       100 Dec  7 04:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-07 11:31:17] -rwxr-xr-x 1 boinc boinc      7986 Dec  7 04:33 run_atlas
[2025-12-07 11:31:17] -rw-r--r-- 1 boinc boinc       105 Dec  7 04:33 job.xml
[2025-12-07 11:31:17] -rw-r--r-- 2 boinc boinc 411096420 Dec  7 04:33 EVNT.47483658._002341.pool.root.1
[2025-12-07 11:31:17] -rw-r--r-- 2 boinc boinc    590113 Dec  7 04:33 input.tar.gz
[2025-12-07 11:31:17] -rw-r--r-- 2 boinc boinc     15847 Dec  7 04:33 start_atlas.sh
[2025-12-07 11:31:17] drwxrwx--x 2 boinc boinc      4096 Dec  7 04:33 shared
[2025-12-07 11:31:17] -rw-r--r-- 1 boinc boinc         0 Dec  7 04:33 boinc_setup_complete
[2025-12-07 11:31:17] -rw-r--r-- 1 boinc boinc      6372 Dec  7 04:33 init_data.xml
[2025-12-07 11:31:17] -rw-r--r-- 1 boinc boinc         0 Dec  7 04:33 boinc_lockfile
[2025-12-07 11:31:17] -rw-r--r-- 1 boinc boinc      2783 Dec  7 04:33 pandaJob.out
[2025-12-07 11:31:17] -rw------- 1 boinc boinc    981451 Dec  7 04:33 agis_schedconf.cvmfs.json
[2025-12-07 11:31:17] drwx------ 5 boinc boinc      4096 Dec  7 04:33 pilot3
[2025-12-07 11:31:17] -rw-r--r-- 1 boinc boinc       532 Dec  7 11:26 boinc_task_state.xml
[2025-12-07 11:31:17] -rw------- 1 boinc boinc 922179701 Dec  7 11:30 HITS.47556161._003231.pool.root.1
[2025-12-07 11:31:17] -rw------- 1 boinc boinc      1028 Dec  7 11:30 memory_monitor_summary.json
[2025-12-07 11:31:17] -rw------- 1 boinc boinc   1516240 Dec  7 11:30 agis_ddmendpoints.agis.ALL.json
[2025-12-07 11:31:17] -rw------- 1 boinc boinc   1263253 Dec  7 11:30 log.47556161._003231.job.log.tgz.1
[2025-12-07 11:31:17] -rw------- 1 boinc boinc        95 Dec  7 11:30 pilot_heartbeat.json
[2025-12-07 11:31:17] -rw------- 1 boinc boinc      8568 Dec  7 11:30 heartbeat.json
[2025-12-07 11:31:17] -rw-r--r-- 1 boinc boinc        28 Dec  7 11:31 wrapper_checkpoint.txt
[2025-12-07 11:31:17] -rw-r--r-- 1 boinc boinc      8192 Dec  7 11:31 boinc_mmap_file
[2025-12-07 11:31:17] -rw------- 1 boinc boinc       747 Dec  7 11:31 pilotlog.txt
[2025-12-07 11:31:17] -rw------- 1 boinc boinc   3531806 Dec  7 11:31 log.47556161._003231.job.log.1
[2025-12-07 11:31:17] -rw------- 1 boinc boinc       353 Dec  7 11:31 output.list
[2025-12-07 11:31:17] -rw-r--r-- 1 boinc boinc       620 Dec  7 11:31 runtime_log
[2025-12-07 11:31:17] -rw------- 1 boinc boinc   4812800 Dec  7 11:31 result.tar.gz
[2025-12-07 11:31:17] -rw-r--r-- 1 boinc boinc      8898 Dec  7 11:31 runtime_log.err
[2025-12-07 11:31:17] -rw------- 1 boinc boinc       665 Dec  7 11:31 pIaNDmraBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmodJKDmuLzYSo.diag
[2025-12-07 11:31:17] -rw-r--r-- 1 boinc boinc     21021 Dec  7 11:31 stderr.txt
[2025-12-07 11:31:17] HITS file was successfully produced:
[2025-12-07 11:31:17] -rw------- 1 boinc boinc 922179701 Dec  7 11:30 shared/HITS.pool.root.1
[2025-12-07 11:31:17]  *** Contents of shared directory: ***
[2025-12-07 11:31:17] total 1307336
[2025-12-07 11:31:17] -rw-r--r-- 2 boinc boinc 411096420 Dec  7 04:33 ATLAS.root_0
[2025-12-07 11:31:17] -rw-r--r-- 2 boinc boinc    590113 Dec  7 04:33 input.tar.gz
[2025-12-07 11:31:17] -rw-r--r-- 2 boinc boinc     15847 Dec  7 04:33 start_atlas.sh
[2025-12-07 11:31:17] -rw------- 1 boinc boinc 922179701 Dec  7 11:30 HITS.pool.root.1
[2025-12-07 11:31:17] -rw------- 1 boinc boinc   4812800 Dec  7 11:31 result.tar.gz
11:31:18 (2683906): run_atlas exited; CPU time 98005.714638
11:31:18 (2683906): called boinc_finish(0)

</stderr_txt>
]]>

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