Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:02:14 (4112562): wrapper (7.7.26015): starting
15:02:14 (4112562): wrapper: running run_atlas (--nthreads 9)
[2025-12-03 15:02:14] Arguments: --nthreads 9
[2025-12-03 15:02:14] Threads: 9
[2025-12-03 15:02:14] Checking for CVMFS
[2025-12-03 15:02:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-03 15:02:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-03 15:02:14] Running cvmfs_config stat atlas.cern.ch
[2025-12-03 15:02:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-03 15:02:15] 2.13.3.0 4548 4266 100012 153611 1 81 8927764 37030912 92 16776704 0 4664606 99.837 841070 47240 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-03 15:02:15] CVMFS is ok
[2025-12-03 15:02:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-03 15:02:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-03 15:02:15] Further information can be found at the LHC@home message board.
[2025-12-03 15:02:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-03 15:02:15] Checking for apptainer binary...
[2025-12-03 15:02:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-03 15:02:15] Running /usr/bin/apptainer --version
[2025-12-03 15:02:15] apptainer version 1.4.4-1.el9
[2025-12-03 15:02:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-03 15:02:15] c-205-36.aglt2.org
[2025-12-03 15:02:15] apptainer works
[2025-12-03 15:02:15] Set ATHENA_PROC_NUMBER=9
[2025-12-03 15:02:15] Set ATHENA_CORE_NUMBER=9
[2025-12-03 15:02:15] Starting ATLAS job with PandaID=6913685528
[2025-12-03 15:02:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 16:10:49]  *** The last 200 lines of the pilot log: ***
[2025-12-03 16:10:49]  protocol_id=None
[2025-12-03 16:10:49]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-03 16:10:49]  replicas=None
[2025-12-03 16:10:49]  scope=mc23_13p6TeV
[2025-12-03 16:10:49]  status=None
[2025-12-03 16:10:49]  status_code=0
[2025-12-03 16:10:49]  storage_token=
[2025-12-03 16:10:49]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6913685528/log.46965017._001811.job.log.tgz.1
[2025-12-03 16:10:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fc/6a/log.46965017._001811.job.log.tgz.1
[2025-12-03 16:10:49]  workdir=None
[2025-12-03 16:10:49] ]
[2025-12-03 16:10:49] 2025-12-03 21:10:12,770 | INFO     | transferring file log.46965017._001811.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6913685528/log.46965017._001811.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-03 16:10:49] 2025-12-03 21:10:12,770 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6913685528/log.46965017._001811.job.log.tgz.1 /tmp/boinchome/slots/1/log.46965017._001811.job
[2025-12-03 16:10:49] 2025-12-03 21:10:12,780 | INFO     | adding to output.list: log.46965017._001811.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fc/6a/log.46965017._001811.job.log.tg
[2025-12-03 16:10:49] 2025-12-03 21:10:12,780 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-03 16:10:49] 2025-12-03 21:10:12,780 | INFO     | summary of transferred files:
[2025-12-03 16:10:49] 2025-12-03 21:10:12,781 | INFO     |  -- lfn=log.46965017._001811.job.log.tgz.1, status_code=0, status=transferred
[2025-12-03 16:10:49] 2025-12-03 21:10:12,781 | INFO     | stage-out finished correctly
[2025-12-03 16:10:49] 2025-12-03 21:10:12,781 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 16:10:49] 2025-12-03 21:10:14,225 | INFO     | time since job start (4072s) is within the limit (172800.0s)
[2025-12-03 16:10:49] 2025-12-03 21:10:14,429 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-03 16:10:49] 2025-12-03 21:10:14,479 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 16:10:49] 2025-12-03 21:10:14,479 | INFO     | job 6913685528 has state=finished
[2025-12-03 16:10:49] 2025-12-03 21:10:14,479 | INFO     | preparing for final server update for job 6913685528 in state='finished'
[2025-12-03 16:10:49] 2025-12-03 21:10:14,531 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-12-03 16:10:49] 2025-12-03 21:10:14,531 | INFO     | this job has now completed (state=finished)
[2025-12-03 16:10:49] 2025-12-03 21:10:14,531 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-03 16:10:49] 2025-12-03 21:10:14,531 | INFO     | log transfer has been attempted: DONE
[2025-12-03 16:10:49] 2025-12-03 21:10:14,531 | INFO     | job 6913685528 has finished - writing final server update
[2025-12-03 16:10:49] 2025-12-03 21:10:14,531 | INFO     | total number of processed events: 400 (read)
[2025-12-03 16:10:49] 2025-12-03 21:10:14,532 | INFO     | executing command: lscpu
[2025-12-03 16:10:49] 2025-12-03 21:10:14,552 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-03 16:10:49] 2025-12-03 21:10:15,322 | WARNING  | process 4122647 can no longer be monitored (due to stat problems) - aborting
[2025-12-03 16:10:49] 2025-12-03 21:10:15,322 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6913685528/memory_monitor_summary.json (trf name=prmon)
[2025-12-03 16:10:49] 2025-12-03 21:10:15,423 | INFO     | number of running child processes to parent process 4122647: 1
[2025-12-03 16:10:49] 2025-12-03 21:10:15,423 | INFO     | maximum number of monitored processes: 6
[2025-12-03 16:10:49] 2025-12-03 21:10:16,230 | INFO     | time since job start (4074s) is within the limit (172800.0s)
[2025-12-03 16:10:49] 2025-12-03 21:10:16,619 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-03 16:10:49] 2025-12-03 21:10:16,622 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2707.0691874999998
[2025-12-03 16:10:49] 2025-12-03 21:10:16,626 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6913685528/memory_monitor_summary.json (trf name=prmon)
[2025-12-03 16:10:49] 2025-12-03 21:10:16,626 | INFO     | extracted standard info from prmon json
[2025-12-03 16:10:49] 2025-12-03 21:10:16,626 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 16:10:49] 2025-12-03 21:10:16,626 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 16:10:49] 2025-12-03 21:10:16,626 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-03 16:10:49] 2025-12-03 21:10:16,627 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-03 16:10:49] 2025-12-03 21:10:16,628 | INFO     | fitting pss+swap vs Time
[2025-12-03 16:10:49] 2025-12-03 21:10:16,628 | INFO     | sum of square deviations: 66959395.0
[2025-12-03 16:10:49] 2025-12-03 21:10:16,628 | INFO     | sum of deviations: -4247728930.4999995
[2025-12-03 16:10:49] 2025-12-03 21:10:16,628 | INFO     | mean x: 1764794266.5
[2025-12-03 16:10:49] 2025-12-03 21:10:16,628 | INFO     | mean y: 2704819.0833333335
[2025-12-03 16:10:49] 2025-12-03 21:10:16,628 | INFO     | intersect: 111956638426.0488
[2025-12-03 16:10:49] 2025-12-03 21:10:16,628 | INFO     | chi2: 0.09729281289319669
[2025-12-03 16:10:49] 2025-12-03 21:10:16,628 | INFO     | current memory leak: -63.44 B/s (using 60 data points, chi2=0.10)
[2025-12-03 16:10:49] 2025-12-03 21:10:16,629 | INFO     | could have reported an average CPU frequency of 2728 MHz (6 samples)
[2025-12-03 16:10:49] 2025-12-03 21:10:16,629 | INFO     | ..............................
[2025-12-03 16:10:49] 2025-12-03 21:10:16,629 | INFO     | . Timing measurements:
[2025-12-03 16:10:49] 2025-12-03 21:10:16,629 | INFO     | . get job = 0 s
[2025-12-03 16:10:49] 2025-12-03 21:10:16,629 | INFO     | . initial setup = 2 s
[2025-12-03 16:10:49] 2025-12-03 21:10:16,629 | INFO     | . payload setup = 4 s
[2025-12-03 16:10:49] 2025-12-03 21:10:16,629 | INFO     | . stage-in = 0 s
[2025-12-03 16:10:49] 2025-12-03 21:10:16,629 | INFO     | . payload execution = 4047 s
[2025-12-03 16:10:49] 2025-12-03 21:10:16,629 | INFO     | . stage-out = 0 s
[2025-12-03 16:10:49] 2025-12-03 21:10:16,629 | INFO     | . log creation = 0 s
[2025-12-03 16:10:49] 2025-12-03 21:10:16,629 | INFO     | ..............................
[2025-12-03 16:10:49] 2025-12-03 21:10:16,682 | INFO     | 
[2025-12-03 16:10:49] 2025-12-03 21:10:16,682 | INFO     | job summary report
[2025-12-03 16:10:49] 2025-12-03 21:10:16,682 | INFO     | --------------------------------------------------
[2025-12-03 16:10:49] 2025-12-03 21:10:16,682 | INFO     | PanDA job id: 6913685528
[2025-12-03 16:10:49] 2025-12-03 21:10:16,682 | INFO     | task id: 46965017
[2025-12-03 16:10:49] 2025-12-03 21:10:16,682 | INFO     | errors: (none)
[2025-12-03 16:10:49] 2025-12-03 21:10:16,682 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 16:10:49] 2025-12-03 21:10:16,682 | INFO     | pilot state: finished 
[2025-12-03 16:10:49] 2025-12-03 21:10:16,683 | INFO     | transexitcode: 0
[2025-12-03 16:10:49] 2025-12-03 21:10:16,683 | INFO     | exeerrorcode: 0
[2025-12-03 16:10:49] 2025-12-03 21:10:16,683 | INFO     | exeerrordiag: 
[2025-12-03 16:10:49] 2025-12-03 21:10:16,683 | INFO     | exitcode: 0
[2025-12-03 16:10:49] 2025-12-03 21:10:16,683 | INFO     | exitmsg: OK
[2025-12-03 16:10:49] 2025-12-03 21:10:16,683 | INFO     | cpuconsumptiontime: 33116 s
[2025-12-03 16:10:49] 2025-12-03 21:10:16,683 | INFO     | nevents: 400
[2025-12-03 16:10:49] 2025-12-03 21:10:16,683 | INFO     | neventsw: 0
[2025-12-03 16:10:49] 2025-12-03 21:10:16,683 | INFO     | pid: 4122647
[2025-12-03 16:10:49] 2025-12-03 21:10:16,683 | INFO     | pgrp: 4122647
[2025-12-03 16:10:49] 2025-12-03 21:10:16,683 | INFO     | corecount: 9
[2025-12-03 16:10:49] 2025-12-03 21:10:16,683 | INFO     | event service: False
[2025-12-03 16:10:49] 2025-12-03 21:10:16,683 | INFO     | sizes: {0: 2283926, 2: 2284188, 11: 2284216, 4056: 2310224, 4058: 2319222, 4059: 2319278, 4061: 2319600}
[2025-12-03 16:10:49] 2025-12-03 21:10:16,683 | INFO     | --------------------------------------------------
[2025-12-03 16:10:49] 2025-12-03 21:10:16,683 | INFO     | 
[2025-12-03 16:10:49] 2025-12-03 21:10:16,683 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-03 16:10:49] 2025-12-03 21:10:16,694 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 16:10:49] 2025-12-03 21:10:16,694 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 16:10:49] 2025-12-03 21:10:16,694 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 16:10:49] 2025-12-03 21:10:16,694 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 16:10:49] 2025-12-03 21:10:16,694 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 16:10:49] 2025-12-03 21:10:16,694 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 16:10:49] 2025-12-03 21:10:16,694 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 16:10:49] 2025-12-03 21:10:16,694 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 16:10:49] 2025-12-03 21:10:16,694 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 16:10:49] 2025-12-03 21:10:16,694 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 16:10:49] 2025-12-03 21:10:16,694 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 16:10:49] 2025-12-03 21:10:16,694 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 16:10:49] 2025-12-03 21:10:16,695 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 16:10:49] 2025-12-03 21:10:16,695 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 16:10:49] 2025-12-03 21:10:16,695 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 16:10:49] 2025-12-03 21:10:16,695 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 16:10:49] 2025-12-03 21:10:16,695 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 16:10:49] 2025-12-03 21:10:16,695 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 16:10:49] 2025-12-03 21:10:16,695 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 16:10:49] 2025-12-03 21:10:16,695 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 16:10:49] 2025-12-03 21:10:16,695 | INFO     | job 6913685528 has completed (purged errors)
[2025-12-03 16:10:49] 2025-12-03 21:10:16,695 | INFO     | overall cleanup function is called
[2025-12-03 16:10:49] 2025-12-03 21:10:17,702 | INFO     | --- collectZombieJob: --- 10, [4122647]
[2025-12-03 16:10:49] 2025-12-03 21:10:17,702 | INFO     | zombie collector waiting for pid 4122647
[2025-12-03 16:10:49] 2025-12-03 21:10:17,702 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 16:10:49] 2025-12-03 21:10:17,702 | INFO     | collected zombie processes
[2025-12-03 16:10:49] 2025-12-03 21:10:17,703 | INFO     | will attempt to kill all subprocesses of pid=4122647
[2025-12-03 16:10:49] 2025-12-03 21:10:17,802 | INFO     | process IDs to be killed: [4122647] (in reverse order)
[2025-12-03 16:10:49] 2025-12-03 21:10:17,828 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 16:10:49] 2025-12-03 21:10:17,829 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 16:10:49] 2025-12-03 21:10:17,831 | INFO     | did not find any defunct processes belonging to 4122647
[2025-12-03 16:10:49] 2025-12-03 21:10:17,833 | INFO     | did not find any defunct processes belonging to 4122647
[2025-12-03 16:10:49] 2025-12-03 21:10:17,834 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 16:10:49] 2025-12-03 21:10:17,834 | INFO     | ready for new job
[2025-12-03 16:10:49] 2025-12-03 21:10:17,834 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 16:10:49] 2025-12-03 21:10:17,835 | INFO     | ***************************************
[2025-12-03 16:10:49] 2025-12-03 21:10:17,835 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 16:10:49] 2025-12-03 21:10:17,835 | INFO     | ***************************************
[2025-12-03 16:10:49] 2025-12-03 21:10:17,836 | INFO     | 
[2025-12-03 16:10:49] 2025-12-03 21:10:17,837 | INFO     | architecture information:
[2025-12-03 16:10:49] 2025-12-03 21:10:17,837 | INFO     | executing command: cat /etc/os-release
[2025-12-03 16:10:49] 2025-12-03 21:10:17,843 | INFO     | cat /etc/os-release:
[2025-12-03 16:10:49] NAME="CentOS Linux"
[2025-12-03 16:10:49] VERSION="7 (Core)"
[2025-12-03 16:10:49] ID="centos"
[2025-12-03 16:10:49] ID_LIKE="rhel fedora"
[2025-12-03 16:10:49] VERSION_ID="7"
[2025-12-03 16:10:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 16:10:49] ANSI_COLOR="0;31"
[2025-12-03 16:10:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 16:10:49] HOME_URL="https://www.centos.org/"
[2025-12-03 16:10:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 16:10:49] 
[2025-12-03 16:10:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 16:10:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 16:10:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 16:10:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 16:10:49] 
[2025-12-03 16:10:49] 2025-12-03 21:10:17,843 | INFO     | ***************************************
[2025-12-03 16:10:49] 2025-12-03 21:10:18,346 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-03 16:10:49] 2025-12-03 21:10:18,353 | INFO     | sufficient remaining disk space (42774560768 B)
[2025-12-03 16:10:49] 2025-12-03 21:10:18,354 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 16:10:49] 2025-12-03 21:10:18,354 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 16:10:49] 2025-12-03 21:10:18,354 | INFO     | update_server=False
[2025-12-03 16:10:49] 2025-12-03 21:10:18,354 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 16:10:49] 2025-12-03 21:10:18,354 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 16:10:49] 2025-12-03 21:10:18,354 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 16:10:49] 2025-12-03 21:10:18,368 | INFO     | all data control threads have been joined
[2025-12-03 16:10:49] 2025-12-03 21:10:18,931 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 16:10:49] 2025-12-03 21:10:18,931 | INFO     | aborting loop
[2025-12-03 16:10:49] 2025-12-03 21:10:19,359 | INFO     | [job] retrieve thread has finished
[2025-12-03 16:10:49] 2025-12-03 21:10:19,360 | INFO     | [job] queue monitor thread has finished
[2025-12-03 16:10:49] 2025-12-03 21:10:19,374 | INFO     | [data] control thread has finished
[2025-12-03 16:10:49] 2025-12-03 21:10:19,589 | INFO     | [job] validate thread has finished
[2025-12-03 16:10:49] 2025-12-03 21:10:19,604 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 16:10:49] 2025-12-03 21:10:19,634 | INFO     | all payload control threads have been joined
[2025-12-03 16:10:49] 2025-12-03 21:10:19,758 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 16:10:49] 2025-12-03 21:10:19,907 | INFO     | [payload] validate_post thread has finished
[2025-12-03 16:10:49] 2025-12-03 21:10:19,908 | INFO     | all job control threads have been joined
[2025-12-03 16:10:49] 2025-12-03 21:10:19,937 | INFO     | [job] job monitor thread has finished
[2025-12-03 16:10:49] 2025-12-03 21:10:20,356 | INFO     | [data] copytool_out thread has finished
[2025-12-03 16:10:49] 2025-12-03 21:10:20,464 | INFO     | [data] copytool_in thread has finished
[2025-12-03 16:10:49] 2025-12-03 21:10:20,483 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 16:10:49] 2025-12-03 21:10:20,639 | INFO     | [payload] failed_post thread has finished
[2025-12-03 16:10:49] 2025-12-03 21:10:20,640 | INFO     | [payload] control thread has finished
[2025-12-03 16:10:49] 2025-12-03 21:10:20,856 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 16:10:49] 2025-12-03 21:10:20,914 | INFO     | [job] control thread has finished
[2025-12-03 16:10:49] 2025-12-03 21:10:24,488 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 16:10:49] 2025-12-03 21:10:27,317 | INFO     | [monitor] cgroup control has ended
[2025-12-03 16:10:49] 2025-12-03 21:10:29,286 | INFO     | job.realtimelogging is not enabled
[2025-12-03 16:10:49] 2025-12-03 21:10:30,292 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 16:10:49] 2025-12-03 21:10:30,486 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140612762412864)>', '<ExcThread(monitor, started 140612128995072)>']
[2025-12-03 16:10:49] 2025-12-03 21:10:35,512 | INFO     | all workflow threads have been joined
[2025-12-03 16:10:49] 2025-12-03 21:10:35,512 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 16:10:49] 2025-12-03 21:10:35,512 | INFO     | traces error code: 0
[2025-12-03 16:10:49] 2025-12-03 21:10:35,512 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 16:10:49] 2025-12-03 21:10:49,430 | INFO     | PID=4116262 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-03 16:10:49] 2025-12-03 21:10:49,431 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 16:10:49] 2025-12-03 21:10:49,431 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 16:10:49] 2025-12-03 21:10:49,431 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 16:10:49] 2025-12-03 21:10:49,431 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 16:10:49] 2025-12-03 21:10:49,431 | INFO     | [monitor] control thread has ended
[2025-12-03 16:10:49] 2025-12-03 21:10:49,494 [wrapper] ==== pilot stdout END ====
[2025-12-03 16:10:49] 2025-12-03 21:10:49,496 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 16:10:49] 2025-12-03 21:10:49,497 [wrapper] pilotpid: 4116262
[2025-12-03 16:10:49] 2025-12-03 21:10:49,499 [wrapper] Pilot exit status: 0
[2025-12-03 16:10:49] 2025-12-03 21:10:49,505 [wrapper] pandaids: 6913685528
[2025-12-03 16:10:49] 2025-12-03 21:10:49,524 [wrapper] cleanup supervisor_pilot 4176285 4116263
[2025-12-03 16:10:49] 2025-12-03 21:10:49,526 [wrapper] Test setup, not cleaning
[2025-12-03 16:10:49] 2025-12-03 21:10:49,528 [wrapper] apfmon messages muted
[2025-12-03 16:10:49] 2025-12-03 21:10:49,529 [wrapper] ==== wrapper stdout END ====
[2025-12-03 16:10:49] 2025-12-03 21:10:49,531 [wrapper] ==== wrapper stderr END ====
[2025-12-03 16:10:49]  *** Error codes and diagnostics ***
[2025-12-03 16:10:49]     "exeErrorCode": 0,
[2025-12-03 16:10:49]     "exeErrorDiag": "",
[2025-12-03 16:10:49]     "pilotErrorCode": 0,
[2025-12-03 16:10:49]     "pilotErrorDiag": "",
[2025-12-03 16:10:49]  *** Listing of results directory ***
[2025-12-03 16:10:49] total 470016
[2025-12-03 16:10:49] -rw-r--r--. 1 boincer umatlas    576529 Dec  3 14:20 pilot3.tar.gz
[2025-12-03 16:10:49] -rwx------. 1 boincer umatlas     36292 Dec  3 15:01 runpilot2-wrapper.sh
[2025-12-03 16:10:49] -rw-r--r--. 1 boincer umatlas      5112 Dec  3 15:01 queuedata.json
[2025-12-03 16:10:49] -rw-r--r--. 1 boincer umatlas       100 Dec  3 15:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 16:10:49] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  3 15:02 run_atlas
[2025-12-03 16:10:49] -rw-r--r--. 1 boincer umatlas       105 Dec  3 15:02 job.xml
[2025-12-03 16:10:49] -rw-r--r--. 2 boincer umatlas 275857836 Dec  3 15:02 EVNT.46965009._000068.pool.root.1
[2025-12-03 16:10:49] -rw-r--r--. 2 boincer umatlas     15847 Dec  3 15:02 start_atlas.sh
[2025-12-03 16:10:49] drwxrwx--x. 2 boincer umatlas      4096 Dec  3 15:02 shared
[2025-12-03 16:10:49] -rw-r--r--. 2 boincer umatlas    589982 Dec  3 15:02 input.tar.gz
[2025-12-03 16:10:49] -rw-r--r--. 1 boincer umatlas         0 Dec  3 15:02 boinc_lockfile
[2025-12-03 16:10:49] -rw-r--r--. 1 boincer umatlas      2648 Dec  3 15:02 pandaJob.out
[2025-12-03 16:10:49] -rw-------. 1 boincer umatlas    985951 Dec  3 15:02 agis_schedconf.cvmfs.json
[2025-12-03 16:10:49] -rw-------. 1 boincer umatlas   1516240 Dec  3 15:02 agis_ddmendpoints.agis.ALL.json
[2025-12-03 16:10:49] drwx------. 5 boincer umatlas      4096 Dec  3 15:02 pilot3
[2025-12-03 16:10:49] -rw-r--r--. 1 boincer umatlas      6525 Dec  3 16:03 init_data.xml
[2025-12-03 16:10:49] -rw-------. 1 boincer umatlas 199650087 Dec  3 16:09 HITS.46965017._001811.pool.root.1
[2025-12-03 16:10:49] -rw-------. 1 boincer umatlas        95 Dec  3 16:09 pilot_heartbeat.json
[2025-12-03 16:10:49] -rw-r--r--. 1 boincer umatlas       529 Dec  3 16:09 boinc_task_state.xml
[2025-12-03 16:10:49] -rw-------. 1 boincer umatlas      1032 Dec  3 16:10 memory_monitor_summary.json
[2025-12-03 16:10:49] -rw-------. 1 boincer umatlas    336446 Dec  3 16:10 log.46965017._001811.job.log.tgz.1
[2025-12-03 16:10:49] -rw-------. 1 boincer umatlas      7807 Dec  3 16:10 heartbeat.json
[2025-12-03 16:10:49] -rw-r--r--. 1 boincer umatlas      8192 Dec  3 16:10 boinc_mmap_file
[2025-12-03 16:10:49] -rw-r--r--. 1 boincer umatlas        27 Dec  3 16:10 wrapper_checkpoint.txt
[2025-12-03 16:10:49] -rw-------. 1 boincer umatlas       747 Dec  3 16:10 pilotlog.txt
[2025-12-03 16:10:49] -rw-------. 1 boincer umatlas    607060 Dec  3 16:10 log.46965017._001811.job.log.1
[2025-12-03 16:10:49] -rw-------. 1 boincer umatlas       357 Dec  3 16:10 output.list
[2025-12-03 16:10:49] -rw-r--r--. 1 boincer umatlas       620 Dec  3 16:10 runtime_log
[2025-12-03 16:10:49] -rw-------. 1 boincer umatlas    962560 Dec  3 16:10 result.tar.gz
[2025-12-03 16:10:49] -rw-r--r--. 1 boincer umatlas      8817 Dec  3 16:10 runtime_log.err
[2025-12-03 16:10:49] -rw-------. 1 boincer umatlas       649 Dec  3 16:10 H5fLDmnD8k8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmFPMKDmTrOh1m.diag
[2025-12-03 16:10:49] -rw-r--r--. 1 boincer umatlas     22147 Dec  3 16:10 stderr.txt
[2025-12-03 16:10:49] HITS file was successfully produced:
[2025-12-03 16:10:49] -rw-------. 1 boincer umatlas 199650087 Dec  3 16:09 shared/HITS.pool.root.1
[2025-12-03 16:10:49]  *** Contents of shared directory: ***
[2025-12-03 16:10:49] total 465908
[2025-12-03 16:10:49] -rw-r--r--. 2 boincer umatlas 275857836 Dec  3 15:02 ATLAS.root_0
[2025-12-03 16:10:49] -rw-r--r--. 2 boincer umatlas     15847 Dec  3 15:02 start_atlas.sh
[2025-12-03 16:10:49] -rw-r--r--. 2 boincer umatlas    589982 Dec  3 15:02 input.tar.gz
[2025-12-03 16:10:49] -rw-------. 1 boincer umatlas 199650087 Dec  3 16:09 HITS.pool.root.1
[2025-12-03 16:10:49] -rw-------. 1 boincer umatlas    962560 Dec  3 16:10 result.tar.gz
16:10:50 (4112562): run_atlas exited; CPU time 33153.295032
16:10:50 (4112562): called boinc_finish(0)

</stderr_txt>
]]>

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