Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:09:41 (1894815): wrapper (7.7.26015): starting
11:09:41 (1894815): wrapper: running run_atlas (--nthreads 8)
[2025-12-03 11:09:41] Arguments: --nthreads 8
[2025-12-03 11:09:41] Threads: 8
[2025-12-03 11:09:41] Checking for CVMFS
[2025-12-03 11:09:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-03 11:09:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-03 11:09:42] Running cvmfs_config stat atlas.cern.ch
[2025-12-03 11:09:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-03 11:09:44] 2.13.2.0 1657905 40560 222592 153602 2 227 28224634 40960000 32598 16776704 0 464635626 99.691 369217768 48262 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-03 11:09:44] CVMFS is ok
[2025-12-03 11:09:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-03 11:09:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-03 11:09:44] Further information can be found at the LHC@home message board.
[2025-12-03 11:09:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-03 11:09:44] Checking for apptainer binary...
[2025-12-03 11:09:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-03 11:09:44] Running /usr/bin/apptainer --version
[2025-12-03 11:09:44] apptainer version 1.4.4-1.el9
[2025-12-03 11:09:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-03 11:09:45] c-208-39.aglt2.org
[2025-12-03 11:09:45] apptainer works
[2025-12-03 11:09:45] Set ATHENA_PROC_NUMBER=8
[2025-12-03 11:09:45] Set ATHENA_CORE_NUMBER=8
[2025-12-03 11:09:45] Starting ATLAS job with PandaID=6895386881
[2025-12-03 11:09:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 17:52:21]  *** The last 200 lines of the pilot log: ***
[2025-12-03 17:52:21] 2025-12-03 22:51:48,644 | INFO     | sum of deviations: 746997144796.7518
[2025-12-03 17:52:21] 2025-12-03 22:51:48,645 | INFO     | mean x: 1764790205.2409327
[2025-12-03 17:52:21] 2025-12-03 22:51:48,645 | INFO     | mean y: 2789406.357512953
[2025-12-03 17:52:21] 2025-12-03 22:51:48,645 | INFO     | intersect: -73927274725.29155
[2025-12-03 17:52:21] 2025-12-03 22:51:48,645 | INFO     | chi2: 14.99402382350494
[2025-12-03 17:52:21] 2025-12-03 22:51:48,645 | INFO     | current chi2=14.99402382350494 (change=8.335924080910823 %)
[2025-12-03 17:52:21] 2025-12-03 22:51:48,645 | INFO     | right removable region: 385
[2025-12-03 17:52:21] 2025-12-03 22:51:48,645 | INFO     | sum of square deviations: 17831451414.593235
[2025-12-03 17:52:21] 2025-12-03 22:51:48,647 | INFO     | sum of deviations: 515187657254.96106
[2025-12-03 17:52:21] 2025-12-03 22:51:48,647 | INFO     | mean x: 1764790510.2409327
[2025-12-03 17:52:21] 2025-12-03 22:51:48,647 | INFO     | mean y: 2808332.774611399
[2025-12-03 17:52:21] 2025-12-03 22:51:48,647 | INFO     | intersect: -50985653984.58487
[2025-12-03 17:52:21] 2025-12-03 22:51:48,647 | INFO     | chi2: 10.960692904419007
[2025-12-03 17:52:21] 2025-12-03 22:51:48,647 | INFO     | current chi2=10.960692904419007 (change=32.99318459521888 %)
[2025-12-03 17:52:21] 2025-12-03 22:51:48,647 | INFO     | sum of square deviations: 17147286239.312191
[2025-12-03 17:52:21] 2025-12-03 22:51:48,648 | INFO     | sum of deviations: 369162147865.96344
[2025-12-03 17:52:21] 2025-12-03 22:51:48,648 | INFO     | mean x: 1764790662.7506561
[2025-12-03 17:52:21] 2025-12-03 22:51:48,649 | INFO     | mean y: 2840880.146981627
[2025-12-03 17:52:21] 2025-12-03 22:51:48,649 | INFO     | intersect: -37991154350.49203
[2025-12-03 17:52:21] 2025-12-03 22:51:48,649 | INFO     | chi2: 6.7257517294651805
[2025-12-03 17:52:21] 2025-12-03 22:51:48,649 | INFO     | current chi2=6.7257517294651805 (change=38.63753151268777 %)
[2025-12-03 17:52:21] 2025-12-03 22:51:48,649 | INFO     | sum of square deviations: 16480842326.45739
[2025-12-03 17:52:21] 2025-12-03 22:51:48,650 | INFO     | sum of deviations: 239351678820.60114
[2025-12-03 17:52:21] 2025-12-03 22:51:48,650 | INFO     | mean x: 1764790815.2606382
[2025-12-03 17:52:21] 2025-12-03 22:51:48,650 | INFO     | mean y: 2870590.912234043
[2025-12-03 17:52:21] 2025-12-03 22:51:48,650 | INFO     | intersect: -25627229863.46233
[2025-12-03 17:52:21] 2025-12-03 22:51:48,651 | INFO     | chi2: 3.5419273403116973
[2025-12-03 17:52:21] 2025-12-03 22:51:48,651 | INFO     | current chi2=3.5419273403116973 (change=47.33782210849842 %)
[2025-12-03 17:52:21] 2025-12-03 22:51:48,651 | INFO     | sum of square deviations: 15831932496.59839
[2025-12-03 17:52:21] 2025-12-03 22:51:48,652 | INFO     | sum of deviations: 142208378564.8787
[2025-12-03 17:52:21] 2025-12-03 22:51:48,652 | INFO     | mean x: 1764790967.7654986
[2025-12-03 17:52:21] 2025-12-03 22:51:48,652 | INFO     | mean y: 2893354.412398922
[2025-12-03 17:52:21] 2025-12-03 22:51:48,652 | INFO     | intersect: -15849123579.45193
[2025-12-03 17:52:21] 2025-12-03 22:51:48,652 | INFO     | chi2: 1.59003366813716
[2025-12-03 17:52:21] 2025-12-03 22:51:48,653 | INFO     | current chi2=1.59003366813716 (change=55.10823584548085 %)
[2025-12-03 17:52:21] 2025-12-03 22:51:48,653 | INFO     | sum of square deviations: 15200572849.792374
[2025-12-03 17:52:21] 2025-12-03 22:51:48,654 | INFO     | sum of deviations: 122956889802.3279
[2025-12-03 17:52:21] 2025-12-03 22:51:48,654 | INFO     | mean x: 1764791120.2349727
[2025-12-03 17:52:21] 2025-12-03 22:51:48,654 | INFO     | mean y: 2897996.2868852457
[2025-12-03 17:52:21] 2025-12-03 22:51:48,654 | INFO     | intersect: -14272434219.092241
[2025-12-03 17:52:21] 2025-12-03 22:51:48,654 | INFO     | chi2: 1.5550375503199314
[2025-12-03 17:52:21] 2025-12-03 22:51:48,654 | INFO     | current chi2=1.5550375503199314 (change=2.200967093874758 %)
[2025-12-03 17:52:21] 2025-12-03 22:51:48,654 | INFO     | left removable region: 50
[2025-12-03 17:52:21] 2025-12-03 22:51:48,654 | INFO     | sum of square deviations: 11656053103.33129
[2025-12-03 17:52:21] 2025-12-03 22:51:48,656 | INFO     | sum of deviations: 143686656800.70743
[2025-12-03 17:52:21] 2025-12-03 22:51:48,656 | INFO     | mean x: 1764791699.6925373
[2025-12-03 17:52:21] 2025-12-03 22:51:48,656 | INFO     | mean y: 2930524.8029850745
[2025-12-03 17:52:21] 2025-12-03 22:51:48,656 | INFO     | intersect: -21752033786.91473
[2025-12-03 17:52:21] 2025-12-03 22:51:48,656 | INFO     | chi2: 0.03734440247023726
[2025-12-03 17:52:21] 2025-12-03 22:51:48,656 | INFO     | current memory leak: 12.33 B/s (using 335 data points, chi2=0.04)
[2025-12-03 17:52:21] 2025-12-03 22:51:48,656 | INFO     | could have reported an average CPU frequency of 3776 MHz (17 samples)
[2025-12-03 17:52:21] 2025-12-03 22:51:48,656 | INFO     | ..............................
[2025-12-03 17:52:21] 2025-12-03 22:51:48,656 | INFO     | . Timing measurements:
[2025-12-03 17:52:21] 2025-12-03 22:51:48,656 | INFO     | . get job = 0 s
[2025-12-03 17:52:21] 2025-12-03 22:51:48,656 | INFO     | . initial setup = 10 s
[2025-12-03 17:52:21] 2025-12-03 22:51:48,656 | INFO     | . payload setup = 71 s
[2025-12-03 17:52:21] 2025-12-03 22:51:48,656 | INFO     | . stage-in = 0 s
[2025-12-03 17:52:21] 2025-12-03 22:51:48,656 | INFO     | . payload execution = 23866 s
[2025-12-03 17:52:21] 2025-12-03 22:51:48,656 | INFO     | . stage-out = 2 s
[2025-12-03 17:52:21] 2025-12-03 22:51:48,657 | INFO     | . log creation = 0 s
[2025-12-03 17:52:21] 2025-12-03 22:51:48,657 | INFO     | ..............................
[2025-12-03 17:52:21] 2025-12-03 22:51:48,694 | INFO     | 
[2025-12-03 17:52:21] 2025-12-03 22:51:48,694 | INFO     | job summary report
[2025-12-03 17:52:21] 2025-12-03 22:51:48,694 | INFO     | --------------------------------------------------
[2025-12-03 17:52:21] 2025-12-03 22:51:48,694 | INFO     | PanDA job id: 6895386881
[2025-12-03 17:52:21] 2025-12-03 22:51:48,694 | INFO     | task id: 47556161
[2025-12-03 17:52:21] 2025-12-03 22:51:48,694 | INFO     | errors: (none)
[2025-12-03 17:52:21] 2025-12-03 22:51:48,695 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 17:52:21] 2025-12-03 22:51:48,695 | INFO     | pilot state: finished 
[2025-12-03 17:52:21] 2025-12-03 22:51:48,695 | INFO     | transexitcode: 0
[2025-12-03 17:52:21] 2025-12-03 22:51:48,695 | INFO     | exeerrorcode: 0
[2025-12-03 17:52:21] 2025-12-03 22:51:48,695 | INFO     | exeerrordiag: 
[2025-12-03 17:52:21] 2025-12-03 22:51:48,695 | INFO     | exitcode: 0
[2025-12-03 17:52:21] 2025-12-03 22:51:48,695 | INFO     | exitmsg: OK
[2025-12-03 17:52:21] 2025-12-03 22:51:48,695 | INFO     | cpuconsumptiontime: 137993 s
[2025-12-03 17:52:21] 2025-12-03 22:51:48,695 | INFO     | nevents: 1000
[2025-12-03 17:52:21] 2025-12-03 22:51:48,695 | INFO     | neventsw: 0
[2025-12-03 17:52:21] 2025-12-03 22:51:48,695 | INFO     | pid: 1994599
[2025-12-03 17:52:21] 2025-12-03 22:51:48,695 | INFO     | pgrp: 1994599
[2025-12-03 17:52:21] 2025-12-03 22:51:48,695 | INFO     | corecount: 8
[2025-12-03 17:52:21] 2025-12-03 22:51:48,695 | INFO     | event service: False
[2025-12-03 17:52:21] 2025-12-03 22:51:48,695 | INFO     | sizes: {0: 2283483, 1: 2284339, 2: 2284339, 13: 2284367, 24: 2284423, 34: 2284451, 43: 2284869, 45: 2284897, 23942: 2321078, 23945: 2330128, 23949: 2330382}
[2025-12-03 17:52:21] 2025-12-03 22:51:48,695 | INFO     | --------------------------------------------------
[2025-12-03 17:52:21] 2025-12-03 22:51:48,695 | INFO     | 
[2025-12-03 17:52:21] 2025-12-03 22:51:48,695 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-03 17:52:21] 2025-12-03 22:51:48,708 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 17:52:21] 2025-12-03 22:51:48,708 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 17:52:21] 2025-12-03 22:51:48,708 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 17:52:21] 2025-12-03 22:51:48,708 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 17:52:21] 2025-12-03 22:51:48,708 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 17:52:21] 2025-12-03 22:51:48,709 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 17:52:21] 2025-12-03 22:51:48,709 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 17:52:21] 2025-12-03 22:51:48,709 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 17:52:21] 2025-12-03 22:51:48,709 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 17:52:21] 2025-12-03 22:51:48,709 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 17:52:21] 2025-12-03 22:51:48,709 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 17:52:21] 2025-12-03 22:51:48,709 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 17:52:21] 2025-12-03 22:51:48,709 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 17:52:21] 2025-12-03 22:51:48,709 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 17:52:21] 2025-12-03 22:51:48,709 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 17:52:21] 2025-12-03 22:51:48,709 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 17:52:21] 2025-12-03 22:51:48,709 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 17:52:21] 2025-12-03 22:51:48,709 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 17:52:21] 2025-12-03 22:51:48,709 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 17:52:21] 2025-12-03 22:51:48,709 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 17:52:21] 2025-12-03 22:51:48,709 | INFO     | job 6895386881 has completed (purged errors)
[2025-12-03 17:52:21] 2025-12-03 22:51:48,709 | INFO     | overall cleanup function is called
[2025-12-03 17:52:21] 2025-12-03 22:51:49,721 | INFO     | --- collectZombieJob: --- 10, [1994599]
[2025-12-03 17:52:21] 2025-12-03 22:51:49,721 | INFO     | zombie collector waiting for pid 1994599
[2025-12-03 17:52:21] 2025-12-03 22:51:49,721 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 17:52:21] 2025-12-03 22:51:49,721 | INFO     | collected zombie processes
[2025-12-03 17:52:21] 2025-12-03 22:51:49,721 | INFO     | will attempt to kill all subprocesses of pid=1994599
[2025-12-03 17:52:21] 2025-12-03 22:51:50,077 | INFO     | process IDs to be killed: [1994599] (in reverse order)
[2025-12-03 17:52:21] 2025-12-03 22:51:50,219 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 17:52:21] 2025-12-03 22:51:50,219 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 17:52:21] 2025-12-03 22:51:50,236 | INFO     | did not find any defunct processes belonging to 1994599
[2025-12-03 17:52:21] 2025-12-03 22:51:50,252 | INFO     | did not find any defunct processes belonging to 1994599
[2025-12-03 17:52:21] 2025-12-03 22:51:50,253 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 17:52:21] 2025-12-03 22:51:50,254 | INFO     | ready for new job
[2025-12-03 17:52:21] 2025-12-03 22:51:50,254 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 17:52:21] 2025-12-03 22:51:50,256 | INFO     | ***************************************
[2025-12-03 17:52:21] 2025-12-03 22:51:50,256 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 17:52:21] 2025-12-03 22:51:50,256 | INFO     | ***************************************
[2025-12-03 17:52:21] 2025-12-03 22:51:50,256 | INFO     | 
[2025-12-03 17:52:21] 2025-12-03 22:51:50,260 | INFO     | architecture information:
[2025-12-03 17:52:21] 2025-12-03 22:51:50,261 | INFO     | executing command: cat /etc/os-release
[2025-12-03 17:52:21] 2025-12-03 22:51:50,274 | INFO     | cat /etc/os-release:
[2025-12-03 17:52:21] NAME="CentOS Linux"
[2025-12-03 17:52:21] VERSION="7 (Core)"
[2025-12-03 17:52:21] ID="centos"
[2025-12-03 17:52:21] ID_LIKE="rhel fedora"
[2025-12-03 17:52:21] VERSION_ID="7"
[2025-12-03 17:52:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 17:52:21] ANSI_COLOR="0;31"
[2025-12-03 17:52:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 17:52:21] HOME_URL="https://www.centos.org/"
[2025-12-03 17:52:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 17:52:21] 
[2025-12-03 17:52:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 17:52:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 17:52:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 17:52:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 17:52:21] 
[2025-12-03 17:52:21] 2025-12-03 22:51:50,274 | INFO     | ***************************************
[2025-12-03 17:52:21] 2025-12-03 22:51:50,777 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-03 17:52:21] 2025-12-03 22:51:50,791 | INFO     | sufficient remaining disk space (171334172672 B)
[2025-12-03 17:52:21] 2025-12-03 22:51:50,791 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 17:52:21] 2025-12-03 22:51:50,791 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 17:52:21] 2025-12-03 22:51:50,791 | INFO     | update_server=False
[2025-12-03 17:52:21] 2025-12-03 22:51:50,791 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 17:52:21] 2025-12-03 22:51:50,791 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 17:52:21] 2025-12-03 22:51:50,791 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 17:52:21] 2025-12-03 22:51:50,815 | INFO     | all job control threads have been joined
[2025-12-03 17:52:21] 2025-12-03 22:51:50,829 | INFO     | all data control threads have been joined
[2025-12-03 17:52:21] 2025-12-03 22:51:51,071 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-03 17:52:21] 2025-12-03 22:51:51,072 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-03 17:52:21] 2025-12-03 22:51:51,072 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 17:52:21] 2025-12-03 22:51:51,072 | INFO     | will abort loop
[2025-12-03 17:52:21] 2025-12-03 22:51:51,792 | INFO     | [job] retrieve thread has finished
[2025-12-03 17:52:21] 2025-12-03 22:51:51,821 | INFO     | [job] control thread has finished
[2025-12-03 17:52:21] 2025-12-03 22:51:51,831 | INFO     | all payload control threads have been joined
[2025-12-03 17:52:21] 2025-12-03 22:51:51,834 | INFO     | [data] control thread has finished
[2025-12-03 17:52:21] 2025-12-03 22:51:51,841 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 17:52:21] 2025-12-03 22:51:52,003 | INFO     | [payload] failed_post thread has finished
[2025-12-03 17:52:21] 2025-12-03 22:51:52,077 | INFO     | [job] job monitor thread has finished
[2025-12-03 17:52:21] 2025-12-03 22:51:52,159 | INFO     | [job] validate thread has finished
[2025-12-03 17:52:21] 2025-12-03 22:51:52,220 | INFO     | [data] copytool_in thread has finished
[2025-12-03 17:52:21] 2025-12-03 22:51:52,336 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 17:52:21] 2025-12-03 22:51:52,495 | INFO     | [payload] validate_post thread has finished
[2025-12-03 17:52:21] 2025-12-03 22:51:52,578 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 17:52:21] 2025-12-03 22:51:52,797 | INFO     | [data] copytool_out thread has finished
[2025-12-03 17:52:21] 2025-12-03 22:51:52,836 | INFO     | [payload] control thread has finished
[2025-12-03 17:52:21] 2025-12-03 22:51:53,704 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 17:52:21] 2025-12-03 22:51:54,710 | INFO     | [job] queue monitor thread has finished
[2025-12-03 17:52:21] 2025-12-03 22:51:54,798 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 17:52:21] 2025-12-03 22:51:58,811 | INFO     | [monitor] cgroup control has ended
[2025-12-03 17:52:21] 2025-12-03 22:52:01,673 | INFO     | job.realtimelogging is not enabled
[2025-12-03 17:52:21] 2025-12-03 22:52:02,679 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 17:52:21] 2025-12-03 22:52:04,467 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140099257567040)>', '<ExcThread(monitor, started 140098897155840)>']
[2025-12-03 17:52:21] 2025-12-03 22:52:09,493 | INFO     | all workflow threads have been joined
[2025-12-03 17:52:21] 2025-12-03 22:52:09,493 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 17:52:21] 2025-12-03 22:52:09,493 | INFO     | traces error code: 0
[2025-12-03 17:52:21] 2025-12-03 22:52:09,494 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 17:52:21] 2025-12-03 22:52:21,202 | INFO     | PID=1924050 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-03 17:52:21] 2025-12-03 22:52:21,202 | INFO     | .. there are 38 such processes running
[2025-12-03 17:52:21] 2025-12-03 22:52:21,203 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 17:52:21] 2025-12-03 22:52:21,203 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 17:52:21] 2025-12-03 22:52:21,203 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 17:52:21] 2025-12-03 22:52:21,203 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 17:52:21] 2025-12-03 22:52:21,203 | INFO     | [monitor] control thread has ended
[2025-12-03 17:52:21] 2025-12-03 22:52:21,351 [wrapper] ==== pilot stdout END ====
[2025-12-03 17:52:21] 2025-12-03 22:52:21,353 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 17:52:21] 2025-12-03 22:52:21,355 [wrapper] pilotpid: 1924050
[2025-12-03 17:52:21] 2025-12-03 22:52:21,358 [wrapper] Pilot exit status: 0
[2025-12-03 17:52:21] 2025-12-03 22:52:21,366 [wrapper] pandaids: 6895386881
[2025-12-03 17:52:21] 2025-12-03 22:52:21,472 [wrapper] cleanup supervisor_pilot  683862 1924051
[2025-12-03 17:52:21] 2025-12-03 22:52:21,474 [wrapper] Test setup, not cleaning
[2025-12-03 17:52:21] 2025-12-03 22:52:21,476 [wrapper] apfmon messages muted
[2025-12-03 17:52:21] 2025-12-03 22:52:21,480 [wrapper] ==== wrapper stdout END ====
[2025-12-03 17:52:21] 2025-12-03 22:52:21,482 [wrapper] ==== wrapper stderr END ====
[2025-12-03 17:52:21]  *** Error codes and diagnostics ***
[2025-12-03 17:52:21]     "exeErrorCode": 0,
[2025-12-03 17:52:21]     "exeErrorDiag": "",
[2025-12-03 17:52:21]     "pilotErrorCode": 0,
[2025-12-03 17:52:21]     "pilotErrorDiag": "",
[2025-12-03 17:52:21]  *** Listing of results directory ***
[2025-12-03 17:52:21] total 1312812
[2025-12-03 17:52:21] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 01:19 queuedata.json
[2025-12-03 17:52:21] -rwx------. 1 boincer umatlas     36292 Nov 24 01:20 runpilot2-wrapper.sh
[2025-12-03 17:52:21] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 01:20 pilot3.tar.gz
[2025-12-03 17:52:21] -rw-r--r--. 1 boincer umatlas       100 Dec  3 11:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 17:52:21] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  3 11:09 run_atlas
[2025-12-03 17:52:21] -rw-r--r--. 1 boincer umatlas       105 Dec  3 11:09 job.xml
[2025-12-03 17:52:21] -rw-r--r--. 2 boincer umatlas 410699709 Dec  3 11:09 EVNT.47483658._002024.pool.root.1
[2025-12-03 17:52:21] -rw-r--r--. 2 boincer umatlas     15847 Dec  3 11:09 start_atlas.sh
[2025-12-03 17:52:21] drwxrwx--x. 2 boincer umatlas      4096 Dec  3 11:09 shared
[2025-12-03 17:52:21] -rw-r--r--. 2 boincer umatlas    590098 Dec  3 11:09 input.tar.gz
[2025-12-03 17:52:21] -rw-r--r--. 1 boincer umatlas         0 Dec  3 11:09 boinc_lockfile
[2025-12-03 17:52:21] -rw-r--r--. 1 boincer umatlas      2784 Dec  3 11:09 pandaJob.out
[2025-12-03 17:52:21] -rw-------. 1 boincer umatlas        57 Dec  3 11:09 setup.sh.local
[2025-12-03 17:52:21] -rw-------. 1 boincer umatlas    985783 Dec  3 11:11 agis_schedconf.cvmfs.json
[2025-12-03 17:52:21] drwx------. 5 boincer umatlas      4096 Dec  3 11:11 pilot3
[2025-12-03 17:52:21] -rw-r--r--. 1 boincer umatlas      7176 Dec  3 17:45 init_data.xml
[2025-12-03 17:52:21] -rw-r--r--. 1 boincer umatlas       533 Dec  3 17:46 boinc_task_state.xml
[2025-12-03 17:52:21] -rw-------. 1 boincer umatlas 919694012 Dec  3 17:51 HITS.47556161._000079.pool.root.1
[2025-12-03 17:52:21] -rw-------. 1 boincer umatlas      1065 Dec  3 17:51 memory_monitor_summary.json
[2025-12-03 17:52:21] -rw-------. 1 boincer umatlas   1516240 Dec  3 17:51 agis_ddmendpoints.agis.ALL.json
[2025-12-03 17:52:21] -rw-------. 1 boincer umatlas   1691233 Dec  3 17:51 log.47556161._000079.job.log.tgz.1
[2025-12-03 17:52:21] -rw-------. 1 boincer umatlas      8630 Dec  3 17:51 heartbeat.json
[2025-12-03 17:52:21] -rw-r--r--. 1 boincer umatlas      8192 Dec  3 17:52 boinc_mmap_file
[2025-12-03 17:52:21] -rw-r--r--. 1 boincer umatlas        29 Dec  3 17:52 wrapper_checkpoint.txt
[2025-12-03 17:52:21] -rw-------. 1 boincer umatlas       823 Dec  3 17:52 pilotlog.txt
[2025-12-03 17:52:21] -rw-------. 1 boincer umatlas        95 Dec  3 17:52 pilot_heartbeat.json
[2025-12-03 17:52:21] -rw-------. 1 boincer umatlas   3315847 Dec  3 17:52 log.47556161._000079.job.log.1
[2025-12-03 17:52:21] -rw-------. 1 boincer umatlas       353 Dec  3 17:52 output.list
[2025-12-03 17:52:21] -rw-r--r--. 1 boincer umatlas       620 Dec  3 17:52 runtime_log
[2025-12-03 17:52:21] -rw-------. 1 boincer umatlas   5027840 Dec  3 17:52 result.tar.gz
[2025-12-03 17:52:21] -rw-r--r--. 1 boincer umatlas      9343 Dec  3 17:52 runtime_log.err
[2025-12-03 17:52:21] -rw-------. 1 boincer umatlas       665 Dec  3 17:52 3kMKDmn6eh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdVLKDmbJQh2n.diag
[2025-12-03 17:52:21] -rw-r--r--. 1 boincer umatlas     21223 Dec  3 17:52 stderr.txt
[2025-12-03 17:52:21] HITS file was successfully produced:
[2025-12-03 17:52:21] -rw-------. 1 boincer umatlas 919694012 Dec  3 17:51 shared/HITS.pool.root.1
[2025-12-03 17:52:21]  *** Contents of shared directory: ***
[2025-12-03 17:52:21] total 1304732
[2025-12-03 17:52:21] -rw-r--r--. 2 boincer umatlas 410699709 Dec  3 11:09 ATLAS.root_0
[2025-12-03 17:52:21] -rw-r--r--. 2 boincer umatlas     15847 Dec  3 11:09 start_atlas.sh
[2025-12-03 17:52:21] -rw-r--r--. 2 boincer umatlas    590098 Dec  3 11:09 input.tar.gz
[2025-12-03 17:52:21] -rw-------. 1 boincer umatlas 919694012 Dec  3 17:51 HITS.pool.root.1
[2025-12-03 17:52:21] -rw-------. 1 boincer umatlas   5027840 Dec  3 17:52 result.tar.gz
17:52:23 (1894815): run_atlas exited; CPU time 138045.426545
17:52:23 (1894815): called boinc_finish(0)

</stderr_txt>
]]>

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