Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:22:03 (685284): wrapper (7.7.26015): starting
10:22:03 (685284): wrapper: running run_atlas (--nthreads 10)
[2025-12-03 10:22:03] Arguments: --nthreads 10
[2025-12-03 10:22:03] Threads: 10
[2025-12-03 10:22:03] Checking for CVMFS
[2025-12-03 10:22:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-03 10:22:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-03 10:22:03] Running cvmfs_config stat atlas.cern.ch
[2025-12-03 10:22:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-03 10:22:04] 2.13.3.0 7314 40243 184416 153600 2 163 35072117 40960001 33162 16776704 0 599941334 99.744 390376078 48512 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-03 10:22:04] CVMFS is ok
[2025-12-03 10:22:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-03 10:22:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-03 10:22:04] Further information can be found at the LHC@home message board.
[2025-12-03 10:22:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-03 10:22:04] Checking for apptainer binary...
[2025-12-03 10:22:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-03 10:22:04] Running /usr/bin/apptainer --version
[2025-12-03 10:22:05] apptainer version 1.4.4-1.el9
[2025-12-03 10:22:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-03 10:22:05] c8-16-1.aglt2.org
[2025-12-03 10:22:05] apptainer works
[2025-12-03 10:22:05] Set ATHENA_PROC_NUMBER=10
[2025-12-03 10:22:05] Set ATHENA_CORE_NUMBER=10
[2025-12-03 10:22:05] Starting ATLAS job with PandaID=6895883572
[2025-12-03 10:22:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 14:04:45]  *** The last 200 lines of the pilot log: ***
[2025-12-03 14:04:45] 2025-12-03 19:04:03,696 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 14:04:45] 2025-12-03 19:04:05,029 | INFO     | time since job start (13309s) is within the limit (172800.0s)
[2025-12-03 14:04:45] 2025-12-03 19:04:05,167 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-03 14:04:45] 2025-12-03 19:04:05,172 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3760.984570312502
[2025-12-03 14:04:45] 2025-12-03 19:04:05,185 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895883572/memory_monitor_summary.json (trf name=prmon)
[2025-12-03 14:04:45] 2025-12-03 19:04:05,185 | INFO     | extracted standard info from prmon json
[2025-12-03 14:04:45] 2025-12-03 19:04:05,185 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 14:04:45] 2025-12-03 19:04:05,185 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 14:04:45] 2025-12-03 19:04:05,188 | INFO     | fitting pss+swap vs Time
[2025-12-03 14:04:45] 2025-12-03 19:04:05,188 | INFO     | sum of square deviations: 3212510221.5046086
[2025-12-03 14:04:45] 2025-12-03 19:04:05,189 | INFO     | sum of deviations: 78459388403.22925
[2025-12-03 14:04:45] 2025-12-03 19:04:05,189 | INFO     | mean x: 1764781981.6513762
[2025-12-03 14:04:45] 2025-12-03 19:04:05,189 | INFO     | mean y: 3206557.0688073393
[2025-12-03 14:04:45] 2025-12-03 19:04:05,189 | INFO     | intersect: -43098201811.541824
[2025-12-03 14:04:45] 2025-12-03 19:04:05,189 | INFO     | chi2: 3.7341447508866263
[2025-12-03 14:04:45] 2025-12-03 19:04:05,189 | INFO     | sum of square deviations: 2996506933.88733
[2025-12-03 14:04:45] 2025-12-03 19:04:05,190 | INFO     | sum of deviations: 135939866325.98587
[2025-12-03 14:04:45] 2025-12-03 19:04:05,190 | INFO     | mean x: 1764781829.1549296
[2025-12-03 14:04:45] 2025-12-03 19:04:05,190 | INFO     | mean y: 3246875.7276995303
[2025-12-03 14:04:45] 2025-12-03 19:04:05,190 | INFO     | intersect: -80058041565.41911
[2025-12-03 14:04:45] 2025-12-03 19:04:05,190 | INFO     | chi2: 1.583289454466099
[2025-12-03 14:04:45] 2025-12-03 19:04:05,190 | INFO     | current chi2=1.583289454466099 (change=57.59967649646772 %)
[2025-12-03 14:04:45] 2025-12-03 19:04:05,190 | INFO     | sum of square deviations: 2790397815.0769377
[2025-12-03 14:04:45] 2025-12-03 19:04:05,191 | INFO     | sum of deviations: 129963425039.23074
[2025-12-03 14:04:45] 2025-12-03 19:04:05,191 | INFO     | mean x: 1764781676.6538463
[2025-12-03 14:04:45] 2025-12-03 19:04:05,191 | INFO     | mean y: 3242453.4615384615
[2025-12-03 14:04:45] 2025-12-03 19:04:05,191 | INFO     | intersect: -82191873205.37373
[2025-12-03 14:04:45] 2025-12-03 19:04:05,191 | INFO     | chi2: 1.5820490387124748
[2025-12-03 14:04:45] 2025-12-03 19:04:05,192 | INFO     | current chi2=1.5820490387124748 (change=0.07834421874819995 %)
[2025-12-03 14:04:45] 2025-12-03 19:04:05,192 | INFO     | right removable region: 207
[2025-12-03 14:04:45] 2025-12-03 19:04:05,192 | INFO     | sum of square deviations: 2996486803.88733
[2025-12-03 14:04:45] 2025-12-03 19:04:05,192 | INFO     | sum of deviations: 30862499431.197224
[2025-12-03 14:04:45] 2025-12-03 19:04:05,192 | INFO     | mean x: 1764782134.1549296
[2025-12-03 14:04:45] 2025-12-03 19:04:05,193 | INFO     | mean y: 3239855.4788732394
[2025-12-03 14:04:45] 2025-12-03 19:04:05,193 | INFO     | intersect: -18173241863.341164
[2025-12-03 14:04:45] 2025-12-03 19:04:05,193 | INFO     | chi2: 2.2206040312771815
[2025-12-03 14:04:45] 2025-12-03 19:04:05,193 | INFO     | current chi2=2.2206040312771815 (change=40.532459788819736 %)
[2025-12-03 14:04:45] 2025-12-03 19:04:05,193 | INFO     | sum of square deviations: 2790370548.764425
[2025-12-03 14:04:45] 2025-12-03 19:04:05,194 | INFO     | sum of deviations: 20717560328.552883
[2025-12-03 14:04:45] 2025-12-03 19:04:05,194 | INFO     | mean x: 1764782286.6586537
[2025-12-03 14:04:45] 2025-12-03 19:04:05,194 | INFO     | mean y: 3247350.331730769
[2025-12-03 14:04:45] 2025-12-03 19:04:05,194 | INFO     | intersect: -13099665990.981237
[2025-12-03 14:04:45] 2025-12-03 19:04:05,194 | INFO     | chi2: 2.2022336617411984
[2025-12-03 14:04:45] 2025-12-03 19:04:05,194 | INFO     | current chi2=2.2022336617411984 (change=0.8272690347867835 %)
[2025-12-03 14:04:45] 2025-12-03 19:04:05,194 | INFO     | left removable region: 20
[2025-12-03 14:04:45] 2025-12-03 19:04:05,194 | INFO     | sum of square deviations: 2027677357.1871603
[2025-12-03 14:04:45] 2025-12-03 19:04:05,195 | INFO     | sum of deviations: 56864400645.77005
[2025-12-03 14:04:45] 2025-12-03 19:04:05,195 | INFO     | mean x: 1764782256.1604278
[2025-12-03 14:04:45] 2025-12-03 19:04:05,195 | INFO     | mean y: 3299578.3743315507
[2025-12-03 14:04:45] 2025-12-03 19:04:05,195 | INFO     | intersect: -49488442740.0707
[2025-12-03 14:04:45] 2025-12-03 19:04:05,195 | INFO     | chi2: 0.005884395395718843
[2025-12-03 14:04:45] 2025-12-03 19:04:05,195 | INFO     | current memory leak: 28.04 B/s (using 187 data points, chi2=0.01)
[2025-12-03 14:04:45] 2025-12-03 19:04:05,195 | INFO     | could have reported an average CPU frequency of 3785 MHz (11 samples)
[2025-12-03 14:04:45] 2025-12-03 19:04:05,195 | INFO     | ..............................
[2025-12-03 14:04:45] 2025-12-03 19:04:05,195 | INFO     | . Timing measurements:
[2025-12-03 14:04:45] 2025-12-03 19:04:05,195 | INFO     | . get job = 0 s
[2025-12-03 14:04:45] 2025-12-03 19:04:05,195 | INFO     | . initial setup = 2 s
[2025-12-03 14:04:45] 2025-12-03 19:04:05,195 | INFO     | . payload setup = 6 s
[2025-12-03 14:04:45] 2025-12-03 19:04:05,195 | INFO     | . stage-in = 0 s
[2025-12-03 14:04:45] 2025-12-03 19:04:05,195 | INFO     | . payload execution = 13278 s
[2025-12-03 14:04:45] 2025-12-03 19:04:05,195 | INFO     | . stage-out = 2 s
[2025-12-03 14:04:45] 2025-12-03 19:04:05,195 | INFO     | . log creation = 0 s
[2025-12-03 14:04:45] 2025-12-03 19:04:05,196 | INFO     | ..............................
[2025-12-03 14:04:45] 2025-12-03 19:04:05,621 | INFO     | 
[2025-12-03 14:04:45] 2025-12-03 19:04:05,621 | INFO     | job summary report
[2025-12-03 14:04:45] 2025-12-03 19:04:05,621 | INFO     | --------------------------------------------------
[2025-12-03 14:04:45] 2025-12-03 19:04:05,621 | INFO     | PanDA job id: 6895883572
[2025-12-03 14:04:45] 2025-12-03 19:04:05,621 | INFO     | task id: 47556149
[2025-12-03 14:04:45] 2025-12-03 19:04:05,621 | INFO     | errors: (none)
[2025-12-03 14:04:45] 2025-12-03 19:04:05,621 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 14:04:45] 2025-12-03 19:04:05,621 | INFO     | pilot state: finished 
[2025-12-03 14:04:45] 2025-12-03 19:04:05,621 | INFO     | transexitcode: 0
[2025-12-03 14:04:45] 2025-12-03 19:04:05,621 | INFO     | exeerrorcode: 0
[2025-12-03 14:04:45] 2025-12-03 19:04:05,621 | INFO     | exeerrordiag: 
[2025-12-03 14:04:45] 2025-12-03 19:04:05,621 | INFO     | exitcode: 0
[2025-12-03 14:04:45] 2025-12-03 19:04:05,621 | INFO     | exitmsg: OK
[2025-12-03 14:04:45] 2025-12-03 19:04:05,622 | INFO     | cpuconsumptiontime: 128635 s
[2025-12-03 14:04:45] 2025-12-03 19:04:05,622 | INFO     | nevents: 1000
[2025-12-03 14:04:45] 2025-12-03 19:04:05,622 | INFO     | neventsw: 0
[2025-12-03 14:04:45] 2025-12-03 19:04:05,622 | INFO     | pid: 709573
[2025-12-03 14:04:45] 2025-12-03 19:04:05,622 | INFO     | pgrp: 709573
[2025-12-03 14:04:45] 2025-12-03 19:04:05,622 | INFO     | corecount: 10
[2025-12-03 14:04:45] 2025-12-03 19:04:05,622 | INFO     | event service: False
[2025-12-03 14:04:45] 2025-12-03 19:04:05,622 | INFO     | sizes: {0: 2284315, 5: 2284577, 11: 2284633, 13285: 2315744, 13288: 2324738, 13289: 2324822, 13293: 2325196}
[2025-12-03 14:04:45] 2025-12-03 19:04:05,622 | INFO     | --------------------------------------------------
[2025-12-03 14:04:45] 2025-12-03 19:04:05,622 | INFO     | 
[2025-12-03 14:04:45] 2025-12-03 19:04:05,622 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-03 14:04:45] 2025-12-03 19:04:05,641 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 14:04:45] 2025-12-03 19:04:05,641 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 14:04:45] 2025-12-03 19:04:05,641 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 14:04:45] 2025-12-03 19:04:05,641 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 14:04:45] 2025-12-03 19:04:05,641 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 14:04:45] 2025-12-03 19:04:05,641 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 14:04:45] 2025-12-03 19:04:05,642 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 14:04:45] 2025-12-03 19:04:05,642 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 14:04:45] 2025-12-03 19:04:05,642 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 14:04:45] 2025-12-03 19:04:05,642 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 14:04:45] 2025-12-03 19:04:05,642 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 14:04:45] 2025-12-03 19:04:05,642 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 14:04:45] 2025-12-03 19:04:05,642 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 14:04:45] 2025-12-03 19:04:05,642 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 14:04:45] 2025-12-03 19:04:05,642 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 14:04:45] 2025-12-03 19:04:05,642 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 14:04:45] 2025-12-03 19:04:05,642 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 14:04:45] 2025-12-03 19:04:05,642 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 14:04:45] 2025-12-03 19:04:05,642 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 14:04:45] 2025-12-03 19:04:05,642 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 14:04:45] 2025-12-03 19:04:05,642 | INFO     | job 6895883572 has completed (purged errors)
[2025-12-03 14:04:45] 2025-12-03 19:04:05,642 | INFO     | overall cleanup function is called
[2025-12-03 14:04:45] 2025-12-03 19:04:06,656 | INFO     | --- collectZombieJob: --- 10, [709573]
[2025-12-03 14:04:45] 2025-12-03 19:04:06,656 | INFO     | zombie collector waiting for pid 709573
[2025-12-03 14:04:45] 2025-12-03 19:04:06,656 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 14:04:45] 2025-12-03 19:04:06,656 | INFO     | collected zombie processes
[2025-12-03 14:04:45] 2025-12-03 19:04:06,656 | INFO     | will attempt to kill all subprocesses of pid=709573
[2025-12-03 14:04:45] 2025-12-03 19:04:07,091 | INFO     | process IDs to be killed: [709573] (in reverse order)
[2025-12-03 14:04:45] 2025-12-03 19:04:07,251 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 14:04:45] 2025-12-03 19:04:07,251 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 14:04:45] 2025-12-03 19:04:07,281 | INFO     | did not find any defunct processes belonging to 709573
[2025-12-03 14:04:45] 2025-12-03 19:04:07,305 | INFO     | did not find any defunct processes belonging to 709573
[2025-12-03 14:04:45] 2025-12-03 19:04:07,306 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 14:04:45] 2025-12-03 19:04:07,306 | INFO     | ready for new job
[2025-12-03 14:04:45] 2025-12-03 19:04:07,306 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 14:04:45] 2025-12-03 19:04:07,308 | INFO     | ***************************************
[2025-12-03 14:04:45] 2025-12-03 19:04:07,308 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 14:04:45] 2025-12-03 19:04:07,308 | INFO     | ***************************************
[2025-12-03 14:04:45] 2025-12-03 19:04:07,308 | INFO     | 
[2025-12-03 14:04:45] 2025-12-03 19:04:07,313 | INFO     | architecture information:
[2025-12-03 14:04:45] 2025-12-03 19:04:07,313 | INFO     | executing command: cat /etc/os-release
[2025-12-03 14:04:45] 2025-12-03 19:04:07,327 | INFO     | cat /etc/os-release:
[2025-12-03 14:04:45] NAME="CentOS Linux"
[2025-12-03 14:04:45] VERSION="7 (Core)"
[2025-12-03 14:04:45] ID="centos"
[2025-12-03 14:04:45] ID_LIKE="rhel fedora"
[2025-12-03 14:04:45] VERSION_ID="7"
[2025-12-03 14:04:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 14:04:45] ANSI_COLOR="0;31"
[2025-12-03 14:04:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 14:04:45] HOME_URL="https://www.centos.org/"
[2025-12-03 14:04:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 14:04:45] 
[2025-12-03 14:04:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 14:04:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 14:04:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 14:04:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 14:04:45] 
[2025-12-03 14:04:45] 2025-12-03 19:04:07,329 | INFO     | ***************************************
[2025-12-03 14:04:45] 2025-12-03 19:04:07,832 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-03 14:04:45] 2025-12-03 19:04:07,848 | INFO     | sufficient remaining disk space (172601901056 B)
[2025-12-03 14:04:45] 2025-12-03 19:04:07,849 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 14:04:45] 2025-12-03 19:04:07,849 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 14:04:45] 2025-12-03 19:04:07,849 | INFO     | update_server=False
[2025-12-03 14:04:45] 2025-12-03 19:04:07,849 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 14:04:45] 2025-12-03 19:04:07,849 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 14:04:45] 2025-12-03 19:04:07,849 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 14:04:45] 2025-12-03 19:04:07,849 | INFO     | aborting loop
[2025-12-03 14:04:45] 2025-12-03 19:04:07,849 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 14:04:45] 2025-12-03 19:04:07,955 | INFO     | all payload control threads have been joined
[2025-12-03 14:04:45] 2025-12-03 19:04:08,182 | INFO     | all data control threads have been joined
[2025-12-03 14:04:45] 2025-12-03 19:04:08,855 | INFO     | [job] retrieve thread has finished
[2025-12-03 14:04:45] 2025-12-03 19:04:08,856 | INFO     | [job] job monitor thread has finished
[2025-12-03 14:04:45] 2025-12-03 19:04:08,960 | INFO     | [payload] control thread has finished
[2025-12-03 14:04:45] 2025-12-03 19:04:09,020 | INFO     | [payload] validate_post thread has finished
[2025-12-03 14:04:45] 2025-12-03 19:04:09,187 | INFO     | [data] control thread has finished
[2025-12-03 14:04:45] 2025-12-03 19:04:09,476 | INFO     | [payload] failed_post thread has finished
[2025-12-03 14:04:45] 2025-12-03 19:04:09,491 | INFO     | all job control threads have been joined
[2025-12-03 14:04:45] 2025-12-03 19:04:09,591 | INFO     | [job] validate thread has finished
[2025-12-03 14:04:45] 2025-12-03 19:04:09,769 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 14:04:45] 2025-12-03 19:04:09,854 | INFO     | [data] copytool_out thread has finished
[2025-12-03 14:04:45] 2025-12-03 19:04:09,863 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 14:04:45] 2025-12-03 19:04:09,932 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 14:04:45] 2025-12-03 19:04:10,061 | INFO     | [data] copytool_in thread has finished
[2025-12-03 14:04:45] 2025-12-03 19:04:10,254 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 14:04:45] 2025-12-03 19:04:10,496 | INFO     | [job] control thread has finished
[2025-12-03 14:04:45] 2025-12-03 19:04:11,259 | INFO     | [job] queue monitor thread has finished
[2025-12-03 14:04:45] 2025-12-03 19:04:11,854 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 14:04:45] 2025-12-03 19:04:18,506 | INFO     | job.realtimelogging is not enabled
[2025-12-03 14:04:45] 2025-12-03 19:04:19,511 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 14:04:45] 2025-12-03 19:04:37,874 | INFO     | [monitor] cgroup control has ended
[2025-12-03 14:04:45] 2025-12-03 19:04:38,720 | INFO     | PID=694167 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-03 14:04:45] 2025-12-03 19:04:38,720 | INFO     | .. there are 41 such processes running
[2025-12-03 14:04:45] 2025-12-03 19:04:38,720 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 14:04:45] 2025-12-03 19:04:38,720 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 14:04:45] 2025-12-03 19:04:38,720 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 14:04:45] 2025-12-03 19:04:39,635 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139957941221184)>', '<ExcThread(monitor, started 139957448455936)>']
[2025-12-03 14:04:45] 2025-12-03 19:04:39,726 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 14:04:45] 2025-12-03 19:04:39,726 | INFO     | [monitor] control thread has ended
[2025-12-03 14:04:45] 2025-12-03 19:04:44,660 | INFO     | all workflow threads have been joined
[2025-12-03 14:04:45] 2025-12-03 19:04:44,662 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 14:04:45] 2025-12-03 19:04:44,663 | INFO     | traces error code: 0
[2025-12-03 14:04:45] 2025-12-03 19:04:44,663 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 14:04:45] 2025-12-03 19:04:44,864 [wrapper] ==== pilot stdout END ====
[2025-12-03 14:04:45] 2025-12-03 19:04:44,867 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 14:04:45] 2025-12-03 19:04:44,869 [wrapper] pilotpid: 694167
[2025-12-03 14:04:45] 2025-12-03 19:04:44,871 [wrapper] Pilot exit status: 0
[2025-12-03 14:04:45] 2025-12-03 19:04:44,886 [wrapper] pandaids: 6895883572
[2025-12-03 14:04:45] 2025-12-03 19:04:45,000 [wrapper] cleanup supervisor_pilot 3202216 694168
[2025-12-03 14:04:45] 2025-12-03 19:04:45,002 [wrapper] Test setup, not cleaning
[2025-12-03 14:04:45] 2025-12-03 19:04:45,004 [wrapper] apfmon messages muted
[2025-12-03 14:04:45] 2025-12-03 19:04:45,006 [wrapper] ==== wrapper stdout END ====
[2025-12-03 14:04:45] 2025-12-03 19:04:45,008 [wrapper] ==== wrapper stderr END ====
[2025-12-03 14:04:45]  *** Error codes and diagnostics ***
[2025-12-03 14:04:45]     "exeErrorCode": 0,
[2025-12-03 14:04:45]     "exeErrorDiag": "",
[2025-12-03 14:04:45]     "pilotErrorCode": 0,
[2025-12-03 14:04:45]     "pilotErrorDiag": "",
[2025-12-03 14:04:45]  *** Listing of results directory ***
[2025-12-03 14:04:45] total 1303092
[2025-12-03 14:04:45] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 11:06 pilot3.tar.gz
[2025-12-03 14:04:45] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 11:52 queuedata.json
[2025-12-03 14:04:45] -rwx------. 1 boincer umatlas     36292 Nov 24 11:54 runpilot2-wrapper.sh
[2025-12-03 14:04:45] -rw-r--r--. 1 boincer umatlas       100 Dec  3 10:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 14:04:45] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  3 10:22 run_atlas
[2025-12-03 14:04:45] -rw-r--r--. 1 boincer umatlas       105 Dec  3 10:22 job.xml
[2025-12-03 14:04:45] -rw-r--r--. 2 boincer umatlas 408072779 Dec  3 10:22 EVNT.47483658._001393.pool.root.1
[2025-12-03 14:04:45] -rw-r--r--. 2 boincer umatlas     15847 Dec  3 10:22 start_atlas.sh
[2025-12-03 14:04:45] drwxrwx--x. 2 boincer umatlas      4096 Dec  3 10:22 shared
[2025-12-03 14:04:45] -rw-r--r--. 2 boincer umatlas    590102 Dec  3 10:22 input.tar.gz
[2025-12-03 14:04:45] -rw-r--r--. 1 boincer umatlas         0 Dec  3 10:22 boinc_lockfile
[2025-12-03 14:04:45] -rw-r--r--. 1 boincer umatlas      2786 Dec  3 10:22 pandaJob.out
[2025-12-03 14:04:45] -rw-------. 1 boincer umatlas        57 Dec  3 10:22 setup.sh.local
[2025-12-03 14:04:45] -rw-------. 1 boincer umatlas    985783 Dec  3 10:22 agis_schedconf.cvmfs.json
[2025-12-03 14:04:45] drwx------. 5 boincer umatlas      4096 Dec  3 10:22 pilot3
[2025-12-03 14:04:45] -rw-r--r--. 1 boincer umatlas       532 Dec  3 13:58 boinc_task_state.xml
[2025-12-03 14:04:45] -rw-r--r--. 1 boincer umatlas      7175 Dec  3 14:02 init_data.xml
[2025-12-03 14:04:45] -rw-------. 1 boincer umatlas 915069312 Dec  3 14:03 HITS.47556149._003800.pool.root.1
[2025-12-03 14:04:45] -rw-------. 1 boincer umatlas        95 Dec  3 14:03 pilot_heartbeat.json
[2025-12-03 14:04:45] -rw-------. 1 boincer umatlas      1067 Dec  3 14:03 memory_monitor_summary.json
[2025-12-03 14:04:45] -rw-------. 1 boincer umatlas   1516240 Dec  3 14:03 agis_ddmendpoints.agis.ALL.json
[2025-12-03 14:04:45] -rw-------. 1 boincer umatlas   1765257 Dec  3 14:03 log.47556149._003800.job.log.tgz.1
[2025-12-03 14:04:45] -rw-------. 1 boincer umatlas      8618 Dec  3 14:04 heartbeat.json
[2025-12-03 14:04:45] -rw-r--r--. 1 boincer umatlas        29 Dec  3 14:04 wrapper_checkpoint.txt
[2025-12-03 14:04:45] -rw-r--r--. 1 boincer umatlas      8192 Dec  3 14:04 boinc_mmap_file
[2025-12-03 14:04:45] -rw-------. 1 boincer umatlas      4896 Dec  3 14:04 pilotlog.txt
[2025-12-03 14:04:45] -rw-------. 1 boincer umatlas   1888883 Dec  3 14:04 log.47556149._003800.job.log.1
[2025-12-03 14:04:45] -rw-------. 1 boincer umatlas       353 Dec  3 14:04 output.list
[2025-12-03 14:04:45] -rw-r--r--. 1 boincer umatlas       620 Dec  3 14:04 runtime_log
[2025-12-03 14:04:45] -rw-------. 1 boincer umatlas   3676160 Dec  3 14:04 result.tar.gz
[2025-12-03 14:04:45] -rw-r--r--. 1 boincer umatlas      9340 Dec  3 14:04 runtime_log.err
[2025-12-03 14:04:45] -rw-------. 1 boincer umatlas       663 Dec  3 14:04 dIJKDm60oh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxmLKDm12jDbn.diag
[2025-12-03 14:04:45] -rw-r--r--. 1 boincer umatlas     21309 Dec  3 14:04 stderr.txt
[2025-12-03 14:04:45] HITS file was successfully produced:
[2025-12-03 14:04:45] -rw-------. 1 boincer umatlas 915069312 Dec  3 14:03 shared/HITS.pool.root.1
[2025-12-03 14:04:45]  *** Contents of shared directory: ***
[2025-12-03 14:04:45] total 1296328
[2025-12-03 14:04:45] -rw-r--r--. 2 boincer umatlas 408072779 Dec  3 10:22 ATLAS.root_0
[2025-12-03 14:04:45] -rw-r--r--. 2 boincer umatlas     15847 Dec  3 10:22 start_atlas.sh
[2025-12-03 14:04:45] -rw-r--r--. 2 boincer umatlas    590102 Dec  3 10:22 input.tar.gz
[2025-12-03 14:04:45] -rw-------. 1 boincer umatlas 915069312 Dec  3 14:03 HITS.pool.root.1
[2025-12-03 14:04:45] -rw-------. 1 boincer umatlas   3676160 Dec  3 14:04 result.tar.gz
14:04:46 (685284): run_atlas exited; CPU time 128668.361786
14:04:46 (685284): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN