Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
03:59:55 (3166546): wrapper (7.7.26015): starting
03:59:55 (3166546): wrapper: running run_atlas (--nthreads 4)
[2025-12-03 03:59:55] Arguments: --nthreads 4
[2025-12-03 03:59:55] Threads: 4
[2025-12-03 03:59:55] Checking for CVMFS
[2025-12-03 03:59:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-03 03:59:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-03 03:59:55] Running cvmfs_config stat atlas.cern.ch
[2025-12-03 03:59:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-03 03:59:56] 2.13.3.0 3932 3859 65456 153590 1 80 3794197 20480000 5053 130560 0 9860955 99.862 1299412 891 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-12-03 03:59:56] CVMFS is ok
[2025-12-03 03:59:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-03 03:59:56] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-03 03:59:56] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-03 03:59:56] Further information can be found at the LHC@home message board.
[2025-12-03 03:59:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-03 03:59:56] Checking for apptainer binary...
[2025-12-03 03:59:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-03 03:59:56] Running /usr/bin/apptainer --version
[2025-12-03 03:59:56] apptainer version 1.4.3
[2025-12-03 03:59:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-03 03:59:56] phantom
[2025-12-03 03:59:56] apptainer works
[2025-12-03 03:59:56] Set ATHENA_PROC_NUMBER=4
[2025-12-03 03:59:56] Set ATHENA_CORE_NUMBER=4
[2025-12-03 03:59:56] Starting ATLAS job with PandaID=6895375048
[2025-12-03 03:59:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 13:17:05]  *** The last 200 lines of the pilot log: ***
[2025-12-03 13:17:05] 2025-12-03 20:16:16,355 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 13:17:05] 2025-12-03 20:16:16,613 | INFO     | time since job start (33370s) is within the limit (172800.0s)
[2025-12-03 13:17:05] 2025-12-03 20:16:18,618 | INFO     | time since job start (33372s) is within the limit (172800.0s)
[2025-12-03 13:17:05] 2025-12-03 20:16:18,781 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-03 13:17:05] 2025-12-03 20:16:18,784 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4074.8397812499998
[2025-12-03 13:17:05] 2025-12-03 20:16:18,788 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6895375048/memory_monitor_summary.json (trf name=prmon)
[2025-12-03 13:17:05] 2025-12-03 20:16:18,788 | INFO     | extracted standard info from prmon json
[2025-12-03 13:17:05] 2025-12-03 20:16:18,789 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 13:17:05] 2025-12-03 20:16:18,789 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 13:17:05] 2025-12-03 20:16:18,794 | INFO     | fitting pss+swap vs Time
[2025-12-03 13:17:05] 2025-12-03 20:16:18,795 | INFO     | sum of square deviations: 50750339458.0
[2025-12-03 13:17:05] 2025-12-03 20:16:18,799 | INFO     | sum of deviations: 248867615536.0001
[2025-12-03 13:17:05] 2025-12-03 20:16:18,800 | INFO     | mean x: 1764776281.0
[2025-12-03 13:17:05] 2025-12-03 20:16:18,800 | INFO     | mean y: 2249708.7696526507
[2025-12-03 13:17:05] 2025-12-03 20:16:18,800 | INFO     | intersect: -8651794179.359015
[2025-12-03 13:17:05] 2025-12-03 20:16:18,800 | INFO     | chi2: 3.199219786666262
[2025-12-03 13:17:05] 2025-12-03 20:16:18,800 | INFO     | sum of square deviations: 49371327555.5
[2025-12-03 13:17:05] 2025-12-03 20:16:18,805 | INFO     | sum of deviations: 332405785034.50006
[2025-12-03 13:17:05] 2025-12-03 20:16:18,805 | INFO     | mean x: 1764776128.5
[2025-12-03 13:17:05] 2025-12-03 20:16:18,805 | INFO     | mean y: 2258918.0166051663
[2025-12-03 13:17:05] 2025-12-03 20:16:18,805 | INFO     | intersect: -11879572571.01408
[2025-12-03 13:17:05] 2025-12-03 20:16:18,805 | INFO     | chi2: 1.6074096953872627
[2025-12-03 13:17:05] 2025-12-03 20:16:18,806 | INFO     | current chi2=1.6074096953872627 (change=49.75619674251079 %)
[2025-12-03 13:17:05] 2025-12-03 20:16:18,806 | INFO     | sum of square deviations: 48017525428.0
[2025-12-03 13:17:05] 2025-12-03 20:16:18,810 | INFO     | sum of deviations: 327049336756.99994
[2025-12-03 13:17:05] 2025-12-03 20:16:18,810 | INFO     | mean x: 1764775976.0
[2025-12-03 13:17:05] 2025-12-03 20:16:18,810 | INFO     | mean y: 2258314.616387337
[2025-12-03 13:17:05] 2025-12-03 20:16:18,810 | INFO     | intersect: -12017703300.042921
[2025-12-03 13:17:05] 2025-12-03 20:16:18,811 | INFO     | chi2: 1.6063701852875425
[2025-12-03 13:17:05] 2025-12-03 20:16:18,811 | INFO     | current chi2=1.6063701852875425 (change=0.06466989111135174 %)
[2025-12-03 13:17:05] 2025-12-03 20:16:18,811 | INFO     | right removable region: 536
[2025-12-03 13:17:05] 2025-12-03 20:16:18,811 | INFO     | sum of square deviations: 49371327555.5
[2025-12-03 13:17:05] 2025-12-03 20:16:18,816 | INFO     | sum of deviations: 166316104384.50003
[2025-12-03 13:17:05] 2025-12-03 20:16:18,816 | INFO     | mean x: 1764776433.5
[2025-12-03 13:17:05] 2025-12-03 20:16:18,816 | INFO     | mean y: 2258801.9612546125
[2025-12-03 13:17:05] 2025-12-03 20:16:18,816 | INFO     | intersect: -5942704723.66698
[2025-12-03 13:17:05] 2025-12-03 20:16:18,816 | INFO     | chi2: 1.6766674707545164
[2025-12-03 13:17:05] 2025-12-03 20:16:18,816 | INFO     | current chi2=1.6766674707545164 (change=47.591363439844095 %)
[2025-12-03 13:17:05] 2025-12-03 20:16:18,817 | INFO     | sum of square deviations: 48017525428.0
[2025-12-03 13:17:05] 2025-12-03 20:16:18,821 | INFO     | sum of deviations: 153976205673.0001
[2025-12-03 13:17:05] 2025-12-03 20:16:18,821 | INFO     | mean x: 1764776586.0
[2025-12-03 13:17:05] 2025-12-03 20:16:18,821 | INFO     | mean y: 2260193.055865922
[2025-12-03 13:17:05] 2025-12-03 20:16:18,821 | INFO     | intersect: -5656790333.824837
[2025-12-03 13:17:05] 2025-12-03 20:16:18,822 | INFO     | chi2: 1.6679316650668887
[2025-12-03 13:17:05] 2025-12-03 20:16:18,822 | INFO     | current chi2=1.6679316650668887 (change=0.521021958140362 %)
[2025-12-03 13:17:05] 2025-12-03 20:16:18,822 | INFO     | left removable region: 20
[2025-12-03 13:17:05] 2025-12-03 20:16:18,822 | INFO     | sum of square deviations: 42601598765.0
[2025-12-03 13:17:05] 2025-12-03 20:16:18,827 | INFO     | sum of deviations: 203693401947.50006
[2025-12-03 13:17:05] 2025-12-03 20:16:18,827 | INFO     | mean x: 1764776555.5
[2025-12-03 13:17:05] 2025-12-03 20:16:18,827 | INFO     | mean y: 2272439.0755813955
[2025-12-03 13:17:05] 2025-12-03 20:16:18,827 | INFO     | intersect: -8435752205.255772
[2025-12-03 13:17:05] 2025-12-03 20:16:18,827 | INFO     | chi2: 0.04464055369250558
[2025-12-03 13:17:05] 2025-12-03 20:16:18,827 | INFO     | current memory leak: 4.78 B/s (using 516 data points, chi2=0.04)
[2025-12-03 13:17:05] 2025-12-03 20:16:18,828 | INFO     | could have reported an average CPU frequency of 3991 MHz (22 samples)
[2025-12-03 13:17:05] 2025-12-03 20:16:18,828 | INFO     | ..............................
[2025-12-03 13:17:05] 2025-12-03 20:16:18,828 | INFO     | . Timing measurements:
[2025-12-03 13:17:05] 2025-12-03 20:16:18,828 | INFO     | . get job = 0 s
[2025-12-03 13:17:05] 2025-12-03 20:16:18,828 | INFO     | . initial setup = 4 s
[2025-12-03 13:17:05] 2025-12-03 20:16:18,828 | INFO     | . payload setup = 4 s
[2025-12-03 13:17:05] 2025-12-03 20:16:18,828 | INFO     | . stage-in = 0 s
[2025-12-03 13:17:05] 2025-12-03 20:16:18,828 | INFO     | . payload execution = 33339 s
[2025-12-03 13:17:05] 2025-12-03 20:16:18,828 | INFO     | . stage-out = 4 s
[2025-12-03 13:17:05] 2025-12-03 20:16:18,828 | INFO     | . log creation = 0 s
[2025-12-03 13:17:05] 2025-12-03 20:16:18,828 | INFO     | ..............................
[2025-12-03 13:17:05] 2025-12-03 20:16:18,891 | INFO     | 
[2025-12-03 13:17:05] 2025-12-03 20:16:18,891 | INFO     | job summary report
[2025-12-03 13:17:05] 2025-12-03 20:16:18,891 | INFO     | --------------------------------------------------
[2025-12-03 13:17:05] 2025-12-03 20:16:18,891 | INFO     | PanDA job id: 6895375048
[2025-12-03 13:17:05] 2025-12-03 20:16:18,892 | INFO     | task id: 47556137
[2025-12-03 13:17:05] 2025-12-03 20:16:18,892 | INFO     | errors: (none)
[2025-12-03 13:17:05] 2025-12-03 20:16:18,892 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 13:17:05] 2025-12-03 20:16:18,892 | INFO     | pilot state: finished 
[2025-12-03 13:17:05] 2025-12-03 20:16:18,892 | INFO     | transexitcode: 0
[2025-12-03 13:17:05] 2025-12-03 20:16:18,892 | INFO     | exeerrorcode: 0
[2025-12-03 13:17:05] 2025-12-03 20:16:18,892 | INFO     | exeerrordiag: 
[2025-12-03 13:17:05] 2025-12-03 20:16:18,892 | INFO     | exitcode: 0
[2025-12-03 13:17:05] 2025-12-03 20:16:18,892 | INFO     | exitmsg: OK
[2025-12-03 13:17:05] 2025-12-03 20:16:18,892 | INFO     | cpuconsumptiontime: 132621 s
[2025-12-03 13:17:05] 2025-12-03 20:16:18,892 | INFO     | nevents: 1000
[2025-12-03 13:17:05] 2025-12-03 20:16:18,892 | INFO     | neventsw: 0
[2025-12-03 13:17:05] 2025-12-03 20:16:18,892 | INFO     | pid: 3177077
[2025-12-03 13:17:05] 2025-12-03 20:16:18,892 | INFO     | pgrp: 3177077
[2025-12-03 13:17:05] 2025-12-03 20:16:18,892 | INFO     | corecount: 4
[2025-12-03 13:17:05] 2025-12-03 20:16:18,892 | INFO     | event service: False
[2025-12-03 13:17:05] 2025-12-03 20:16:18,892 | INFO     | sizes: {0: 2284315, 3: 2284577, 11: 2284605, 33347: 2325385, 33351: 2334393, 33355: 2334449, 33358: 2334823}
[2025-12-03 13:17:05] 2025-12-03 20:16:18,892 | INFO     | --------------------------------------------------
[2025-12-03 13:17:05] 2025-12-03 20:16:18,892 | INFO     | 
[2025-12-03 13:17:05] 2025-12-03 20:16:18,893 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-12-03 13:17:05] 2025-12-03 20:16:18,911 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 13:17:05] 2025-12-03 20:16:18,911 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 13:17:05] 2025-12-03 20:16:18,911 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 13:17:05] 2025-12-03 20:16:18,911 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 13:17:05] 2025-12-03 20:16:18,911 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 13:17:05] 2025-12-03 20:16:18,911 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 13:17:05] 2025-12-03 20:16:18,911 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 13:17:05] 2025-12-03 20:16:18,911 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 13:17:05] 2025-12-03 20:16:18,912 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 13:17:05] 2025-12-03 20:16:18,912 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 13:17:05] 2025-12-03 20:16:18,912 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 13:17:05] 2025-12-03 20:16:18,912 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 13:17:05] 2025-12-03 20:16:18,912 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 13:17:05] 2025-12-03 20:16:18,912 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 13:17:05] 2025-12-03 20:16:18,912 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 13:17:05] 2025-12-03 20:16:18,912 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 13:17:05] 2025-12-03 20:16:18,912 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 13:17:05] 2025-12-03 20:16:18,912 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 13:17:05] 2025-12-03 20:16:18,912 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 13:17:05] 2025-12-03 20:16:18,912 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 13:17:05] 2025-12-03 20:16:18,912 | INFO     | job 6895375048 has completed (purged errors)
[2025-12-03 13:17:05] 2025-12-03 20:16:18,912 | INFO     | overall cleanup function is called
[2025-12-03 13:17:05] 2025-12-03 20:16:19,924 | INFO     | --- collectZombieJob: --- 10, [3177077]
[2025-12-03 13:17:05] 2025-12-03 20:16:19,924 | INFO     | zombie collector waiting for pid 3177077
[2025-12-03 13:17:05] 2025-12-03 20:16:19,924 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 13:17:05] 2025-12-03 20:16:19,924 | INFO     | collected zombie processes
[2025-12-03 13:17:05] 2025-12-03 20:16:19,924 | INFO     | will attempt to kill all subprocesses of pid=3177077
[2025-12-03 13:17:05] 2025-12-03 20:16:20,072 | INFO     | process IDs to be killed: [3177077] (in reverse order)
[2025-12-03 13:17:05] 2025-12-03 20:16:20,122 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 13:17:05] 2025-12-03 20:16:20,122 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 13:17:05] 2025-12-03 20:16:20,126 | INFO     | did not find any defunct processes belonging to 3177077
[2025-12-03 13:17:05] 2025-12-03 20:16:20,129 | INFO     | did not find any defunct processes belonging to 3177077
[2025-12-03 13:17:05] 2025-12-03 20:16:20,130 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 13:17:05] 2025-12-03 20:16:20,130 | INFO     | ready for new job
[2025-12-03 13:17:05] 2025-12-03 20:16:20,130 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 13:17:05] 2025-12-03 20:16:20,133 | INFO     | ***************************************
[2025-12-03 13:17:05] 2025-12-03 20:16:20,133 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 13:17:05] 2025-12-03 20:16:20,133 | INFO     | ***************************************
[2025-12-03 13:17:05] 2025-12-03 20:16:20,133 | INFO     | 
[2025-12-03 13:17:05] 2025-12-03 20:16:20,134 | INFO     | architecture information:
[2025-12-03 13:17:05] 2025-12-03 20:16:20,134 | INFO     | executing command: cat /etc/os-release
[2025-12-03 13:17:05] 2025-12-03 20:16:20,145 | INFO     | cat /etc/os-release:
[2025-12-03 13:17:05] NAME="CentOS Linux"
[2025-12-03 13:17:05] VERSION="7 (Core)"
[2025-12-03 13:17:05] ID="centos"
[2025-12-03 13:17:05] ID_LIKE="rhel fedora"
[2025-12-03 13:17:05] VERSION_ID="7"
[2025-12-03 13:17:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 13:17:05] ANSI_COLOR="0;31"
[2025-12-03 13:17:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 13:17:05] HOME_URL="https://www.centos.org/"
[2025-12-03 13:17:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 13:17:05] 
[2025-12-03 13:17:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 13:17:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 13:17:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 13:17:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 13:17:05] 
[2025-12-03 13:17:05] 2025-12-03 20:16:20,146 | INFO     | ***************************************
[2025-12-03 13:17:05] 2025-12-03 20:16:20,647 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-12-03 13:17:05] 2025-12-03 20:16:20,661 | INFO     | sufficient remaining disk space (415308447744 B)
[2025-12-03 13:17:05] 2025-12-03 20:16:20,661 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 13:17:05] 2025-12-03 20:16:20,661 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 13:17:05] 2025-12-03 20:16:20,661 | INFO     | update_server=False
[2025-12-03 13:17:05] 2025-12-03 20:16:20,661 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 13:17:05] 2025-12-03 20:16:20,661 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 13:17:05] 2025-12-03 20:16:20,661 | INFO     | aborting loop
[2025-12-03 13:17:05] 2025-12-03 20:16:20,662 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 13:17:05] 2025-12-03 20:16:20,662 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 13:17:05] 2025-12-03 20:16:20,801 | INFO     | all payload control threads have been joined
[2025-12-03 13:17:05] 2025-12-03 20:16:21,539 | INFO     | all data control threads have been joined
[2025-12-03 13:17:05] 2025-12-03 20:16:21,619 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 13:17:05] 2025-12-03 20:16:21,666 | INFO     | [job] job monitor thread has finished
[2025-12-03 13:17:05] 2025-12-03 20:16:21,666 | INFO     | [job] retrieve thread has finished
[2025-12-03 13:17:05] 2025-12-03 20:16:21,667 | INFO     | [job] queue monitor thread has finished
[2025-12-03 13:17:05] 2025-12-03 20:16:21,805 | INFO     | [payload] validate_post thread has finished
[2025-12-03 13:17:05] 2025-12-03 20:16:21,806 | INFO     | [payload] control thread has finished
[2025-12-03 13:17:05] 2025-12-03 20:16:22,213 | INFO     | [payload] failed_post thread has finished
[2025-12-03 13:17:05] 2025-12-03 20:16:22,342 | INFO     | all job control threads have been joined
[2025-12-03 13:17:05] 2025-12-03 20:16:22,451 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 13:17:05] 2025-12-03 20:16:22,544 | INFO     | [data] control thread has finished
[2025-12-03 13:17:05] 2025-12-03 20:16:22,664 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 13:17:05] 2025-12-03 20:16:22,667 | INFO     | [data] copytool_out thread has finished
[2025-12-03 13:17:05] 2025-12-03 20:16:22,697 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 13:17:05] 2025-12-03 20:16:22,742 | INFO     | [job] validate thread has finished
[2025-12-03 13:17:05] 2025-12-03 20:16:22,780 | INFO     | [data] copytool_in thread has finished
[2025-12-03 13:17:05] 2025-12-03 20:16:22,993 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 13:17:05] 2025-12-03 20:16:23,347 | INFO     | [job] control thread has finished
[2025-12-03 13:17:05] 2025-12-03 20:16:25,624 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 13:17:05] 2025-12-03 20:16:51,834 | INFO     | PID=3170410 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-03 13:17:05] 2025-12-03 20:16:51,834 | INFO     | .. there are 7 such processes running
[2025-12-03 13:17:05] 2025-12-03 20:16:51,835 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 13:17:05] 2025-12-03 20:16:51,835 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 13:17:05] 2025-12-03 20:16:51,835 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 13:17:05] 2025-12-03 20:16:59,090 | INFO     | [monitor] cgroup control has ended
[2025-12-03 13:17:05] 2025-12-03 20:17:00,095 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131275601852224)>', '<ExcThread(monitor, started 131275096565504)>']
[2025-12-03 13:17:05] 2025-12-03 20:17:00,879 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 13:17:05] 2025-12-03 20:17:00,879 | INFO     | [monitor] control thread has ended
[2025-12-03 13:17:05] 2025-12-03 20:17:05,120 | INFO     | all workflow threads have been joined
[2025-12-03 13:17:05] 2025-12-03 20:17:05,120 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 13:17:05] 2025-12-03 20:17:05,120 | INFO     | traces error code: 0
[2025-12-03 13:17:05] 2025-12-03 20:17:05,120 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 13:17:05] 2025-12-03 20:17:05,189 [wrapper] ==== pilot stdout END ====
[2025-12-03 13:17:05] 2025-12-03 20:17:05,191 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 13:17:05] 2025-12-03 20:17:05,193 [wrapper] pilotpid: 3170410
[2025-12-03 13:17:05] 2025-12-03 20:17:05,195 [wrapper] Pilot exit status: 0
[2025-12-03 13:17:05] 2025-12-03 20:17:05,202 [wrapper] pandaids: 6895375048
[2025-12-03 13:17:05] 2025-12-03 20:17:05,232 [wrapper] cleanup supervisor_pilot 3591997 3170411
[2025-12-03 13:17:05] 2025-12-03 20:17:05,235 [wrapper] Test setup, not cleaning
[2025-12-03 13:17:05] 2025-12-03 20:17:05,237 [wrapper] apfmon messages muted
[2025-12-03 13:17:05] 2025-12-03 20:17:05,238 [wrapper] ==== wrapper stdout END ====
[2025-12-03 13:17:05] 2025-12-03 20:17:05,240 [wrapper] ==== wrapper stderr END ====
[2025-12-03 13:17:05]  *** Error codes and diagnostics ***
[2025-12-03 13:17:05]     "exeErrorCode": 0,
[2025-12-03 13:17:05]     "exeErrorDiag": "",
[2025-12-03 13:17:05]     "pilotErrorCode": 0,
[2025-12-03 13:17:05]     "pilotErrorDiag": "",
[2025-12-03 13:17:05]  *** Listing of results directory ***
[2025-12-03 13:17:05] total 1319460
[2025-12-03 13:17:05] -rw-r--r-- 1 boinc boinc    576529 Nov 23 16:11 pilot3.tar.gz
[2025-12-03 13:17:05] -rwx------ 1 boinc boinc     36292 Nov 23 16:49 runpilot2-wrapper.sh
[2025-12-03 13:17:05] -rw-r--r-- 1 boinc boinc      5112 Nov 23 16:49 queuedata.json
[2025-12-03 13:17:05] -rw-r--r-- 1 boinc boinc       100 Dec  3 03:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 13:17:05] -rwxr-xr-x 1 boinc boinc      7986 Dec  3 03:59 run_atlas
[2025-12-03 13:17:05] -rw-r--r-- 1 boinc boinc       105 Dec  3 03:59 job.xml
[2025-12-03 13:17:05] -rw-r--r-- 1 boinc boinc      9721 Dec  3 03:59 init_data.xml
[2025-12-03 13:17:05] -rw-r--r-- 2 boinc boinc 410465527 Dec  3 03:59 EVNT.47483658._000952.pool.root.1
[2025-12-03 13:17:05] -rw-r--r-- 2 boinc boinc     15847 Dec  3 03:59 start_atlas.sh
[2025-12-03 13:17:05] drwxrwx--x 2 boinc boinc      4096 Dec  3 03:59 shared
[2025-12-03 13:17:05] -rw-r--r-- 2 boinc boinc    590098 Dec  3 03:59 input.tar.gz
[2025-12-03 13:17:05] -rw-r--r-- 1 boinc boinc         0 Dec  3 03:59 boinc_lockfile
[2025-12-03 13:17:05] -rw-r--r-- 1 boinc boinc      2782 Dec  3 03:59 pandaJob.out
[2025-12-03 13:17:05] -rw------- 1 boinc boinc    985775 Dec  3 04:00 agis_schedconf.cvmfs.json
[2025-12-03 13:17:05] drwx------ 5 boinc boinc      4096 Dec  3 04:00 pilot3
[2025-12-03 13:17:05] -rw-r--r-- 1 boinc boinc       532 Dec  3 13:12 boinc_task_state.xml
[2025-12-03 13:17:05] -rw------- 1 boinc boinc 924435232 Dec  3 13:15 HITS.47556137._009381.pool.root.1
[2025-12-03 13:17:05] -rw------- 1 boinc boinc      1032 Dec  3 13:16 memory_monitor_summary.json
[2025-12-03 13:17:05] -rw------- 1 boinc boinc   1516240 Dec  3 13:16 agis_ddmendpoints.agis.ALL.json
[2025-12-03 13:17:05] -rw------- 1 boinc boinc   1361312 Dec  3 13:16 log.47556137._009381.job.log.tgz.1
[2025-12-03 13:17:05] -rw------- 1 boinc boinc      8557 Dec  3 13:16 heartbeat.json
[2025-12-03 13:17:05] -rw------- 1 boinc boinc        95 Dec  3 13:16 pilot_heartbeat.json
[2025-12-03 13:17:05] -rw-r--r-- 1 boinc boinc      8192 Dec  3 13:17 boinc_mmap_file
[2025-12-03 13:17:05] -rw------- 1 boinc boinc      4831 Dec  3 13:17 pilotlog.txt
[2025-12-03 13:17:05] -rw-r--r-- 1 boinc boinc        29 Dec  3 13:17 wrapper_checkpoint.txt
[2025-12-03 13:17:05] -rw------- 1 boinc boinc   4790556 Dec  3 13:17 log.47556137._009381.job.log.1
[2025-12-03 13:17:05] -rw------- 1 boinc boinc       353 Dec  3 13:17 output.list
[2025-12-03 13:17:05] -rw-r--r-- 1 boinc boinc       620 Dec  3 13:17 runtime_log
[2025-12-03 13:17:05] -rw------- 1 boinc boinc   6174720 Dec  3 13:17 result.tar.gz
[2025-12-03 13:17:05] -rw-r--r-- 1 boinc boinc      8920 Dec  3 13:17 runtime_log.err
[2025-12-03 13:17:05] -rw------- 1 boinc boinc       662 Dec  3 13:17 8HHNDmt0Yh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmDILKDm7h3pSo.diag
[2025-12-03 13:17:05] -rw-r--r-- 1 boinc boinc     21348 Dec  3 13:17 stderr.txt
[2025-12-03 13:17:05] HITS file was successfully produced:
[2025-12-03 13:17:05] -rw------- 1 boinc boinc 924435232 Dec  3 13:15 shared/HITS.pool.root.1
[2025-12-03 13:17:05]  *** Contents of shared directory: ***
[2025-12-03 13:17:05] total 1310256
[2025-12-03 13:17:05] -rw-r--r-- 2 boinc boinc 410465527 Dec  3 03:59 ATLAS.root_0
[2025-12-03 13:17:05] -rw-r--r-- 2 boinc boinc     15847 Dec  3 03:59 start_atlas.sh
[2025-12-03 13:17:05] -rw-r--r-- 2 boinc boinc    590098 Dec  3 03:59 input.tar.gz
[2025-12-03 13:17:05] -rw------- 1 boinc boinc 924435232 Dec  3 13:15 HITS.pool.root.1
[2025-12-03 13:17:05] -rw------- 1 boinc boinc   6174720 Dec  3 13:17 result.tar.gz
13:17:07 (3166546): run_atlas exited; CPU time 132791.723598
13:17:07 (3166546): called boinc_finish(0)

</stderr_txt>
]]>

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