Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:38:24 (3391545): wrapper (7.7.26015): starting
02:38:24 (3391545): wrapper: running run_atlas (--nthreads 8)
[2025-12-03 02:38:24] Arguments: --nthreads 8
[2025-12-03 02:38:24] Threads: 8
[2025-12-03 02:38:24] Checking for CVMFS
[2025-12-03 02:38:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-03 02:38:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-03 02:38:24] Running cvmfs_config stat atlas.cern.ch
[2025-12-03 02:38:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-03 02:38:25] 2.13.3.0 12357 39793 297312 153585 2 449 22026112 32503808 29653 16776704 0 635140672 99.625 571219109 45281 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-03 02:38:25] CVMFS is ok
[2025-12-03 02:38:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-03 02:38:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-03 02:38:25] Further information can be found at the LHC@home message board.
[2025-12-03 02:38:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-03 02:38:25] Checking for apptainer binary...
[2025-12-03 02:38:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-03 02:38:25] Running /usr/bin/apptainer --version
[2025-12-03 02:38:25] apptainer version 1.4.4-1.el9
[2025-12-03 02:38:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-03 02:38:25] c8-7-2.aglt2.org
[2025-12-03 02:38:25] apptainer works
[2025-12-03 02:38:25] Set ATHENA_PROC_NUMBER=8
[2025-12-03 02:38:25] Set ATHENA_CORE_NUMBER=8
[2025-12-03 02:38:25] Starting ATLAS job with PandaID=6895375685
[2025-12-03 02:38:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 10:14:06]  *** The last 200 lines of the pilot log: ***
[2025-12-03 10:14:06] 2025-12-03 15:12:55,730 | INFO     | sum of deviations: 280985879293.4653
[2025-12-03 10:14:06] 2025-12-03 15:12:55,731 | INFO     | mean x: 1764761179.8629212
[2025-12-03 10:14:06] 2025-12-03 15:12:55,731 | INFO     | mean y: 2834586.3191011236
[2025-12-03 10:14:06] 2025-12-03 15:12:55,731 | INFO     | intersect: -18143685981.60642
[2025-12-03 10:14:06] 2025-12-03 15:12:55,731 | INFO     | chi2: 6.859840081658961
[2025-12-03 10:14:06] 2025-12-03 15:12:55,731 | INFO     | sum of square deviations: 26415564286.08881
[2025-12-03 10:14:06] 2025-12-03 15:12:55,754 | INFO     | sum of deviations: 427143431366.3221
[2025-12-03 10:14:06] 2025-12-03 15:12:55,754 | INFO     | mean x: 1764761027.384091
[2025-12-03 10:14:06] 2025-12-03 15:12:55,754 | INFO     | mean y: 2859070.731818182
[2025-12-03 10:14:06] 2025-12-03 15:12:55,754 | INFO     | intersect: -28533577728.968586
[2025-12-03 10:14:06] 2025-12-03 15:12:55,754 | INFO     | chi2: 3.706954957351014
[2025-12-03 10:14:06] 2025-12-03 15:12:55,754 | INFO     | current chi2=3.706954957351014 (change=45.96149599372969 %)
[2025-12-03 10:14:06] 2025-12-03 15:12:55,755 | INFO     | sum of square deviations: 25525290912.25292
[2025-12-03 10:14:06] 2025-12-03 15:12:55,774 | INFO     | sum of deviations: 477042413510.2299
[2025-12-03 10:14:06] 2025-12-03 15:12:55,775 | INFO     | mean x: 1764760874.8850574
[2025-12-03 10:14:06] 2025-12-03 15:12:55,775 | INFO     | mean y: 2867548.604597701
[2025-12-03 10:14:06] 2025-12-03 15:12:55,775 | INFO     | intersect: -32978765840.712482
[2025-12-03 10:14:06] 2025-12-03 15:12:55,775 | INFO     | chi2: 2.628786140493385
[2025-12-03 10:14:06] 2025-12-03 15:12:55,775 | INFO     | current chi2=2.628786140493385 (change=29.085026099914824 %)
[2025-12-03 10:14:06] 2025-12-03 15:12:55,775 | INFO     | sum of square deviations: 24655168077.21151
[2025-12-03 10:14:06] 2025-12-03 15:12:55,794 | INFO     | sum of deviations: 467207630078.4629
[2025-12-03 10:14:06] 2025-12-03 15:12:55,794 | INFO     | mean x: 1764760722.3790698
[2025-12-03 10:14:06] 2025-12-03 15:12:55,794 | INFO     | mean y: 2865824.806976744
[2025-12-03 10:14:06] 2025-12-03 15:12:55,794 | INFO     | intersect: -33438791201.265636
[2025-12-03 10:14:06] 2025-12-03 15:12:55,795 | INFO     | chi2: 2.626416360003755
[2025-12-03 10:14:06] 2025-12-03 15:12:55,795 | INFO     | current chi2=2.626416360003755 (change=0.09014732895637256 %)
[2025-12-03 10:14:06] 2025-12-03 15:12:55,795 | INFO     | right removable region: 429
[2025-12-03 10:14:06] 2025-12-03 15:12:55,795 | INFO     | sum of square deviations: 26415112401.615868
[2025-12-03 10:14:06] 2025-12-03 15:12:55,798 | INFO     | sum of deviations: 153732914128.22495
[2025-12-03 10:14:06] 2025-12-03 15:12:55,798 | INFO     | mean x: 1764761332.3795455
[2025-12-03 10:14:06] 2025-12-03 15:12:55,798 | INFO     | mean y: 2855837.825
[2025-12-03 10:14:06] 2025-12-03 15:12:55,798 | INFO     | intersect: -10267852014.658731
[2025-12-03 10:14:06] 2025-12-03 15:12:55,814 | INFO     | chi2: 4.4094968139417245
[2025-12-03 10:14:06] 2025-12-03 15:12:55,814 | INFO     | current chi2=4.4094968139417245 (change=35.72012231405624 %)
[2025-12-03 10:14:06] 2025-12-03 15:12:55,815 | INFO     | sum of square deviations: 25524734493.4803
[2025-12-03 10:14:06] 2025-12-03 15:12:55,817 | INFO     | sum of deviations: 124988570678.9424
[2025-12-03 10:14:06] 2025-12-03 15:12:55,817 | INFO     | mean x: 1764761484.8873563
[2025-12-03 10:14:06] 2025-12-03 15:12:55,817 | INFO     | mean y: 2860757.0804597703
[2025-12-03 10:14:06] 2025-12-03 15:12:55,817 | INFO     | intersect: -8638757655.900856
[2025-12-03 10:14:06] 2025-12-03 15:12:55,818 | INFO     | chi2: 4.347146868254872
[2025-12-03 10:14:06] 2025-12-03 15:12:55,818 | INFO     | current chi2=4.347146868254872 (change=1.413992306099818 %)
[2025-12-03 10:14:06] 2025-12-03 15:12:55,818 | INFO     | left removable region: 20
[2025-12-03 10:14:06] 2025-12-03 15:12:55,854 | INFO     | sum of square deviations: 21216017586.34713
[2025-12-03 10:14:06] 2025-12-03 15:12:55,857 | INFO     | sum of deviations: 274122393866.7456
[2025-12-03 10:14:06] 2025-12-03 15:12:55,857 | INFO     | mean x: 1764761301.9364302
[2025-12-03 10:14:06] 2025-12-03 15:12:55,857 | INFO     | mean y: 2900397.990220049
[2025-12-03 10:14:06] 2025-12-03 15:12:55,857 | INFO     | intersect: -22798767762.46215
[2025-12-03 10:14:06] 2025-12-03 15:12:55,857 | INFO     | chi2: 0.03282258910276312
[2025-12-03 10:14:06] 2025-12-03 15:12:55,857 | INFO     | current memory leak: 12.92 B/s (using 409 data points, chi2=0.03)
[2025-12-03 10:14:06] 2025-12-03 15:12:55,830 | INFO     | monitor loop #1523: job 0:6895375685 is in state 'finished'
[2025-12-03 10:14:06] 2025-12-03 15:12:55,874 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 10:14:06] 2025-12-03 15:12:55,874 | INFO     | could have reported an average CPU frequency of 3774 MHz (18 samples)
[2025-12-03 10:14:06] 2025-12-03 15:12:55,891 | INFO     | ..............................
[2025-12-03 10:14:06] 2025-12-03 15:12:55,891 | INFO     | . Timing measurements:
[2025-12-03 10:14:06] 2025-12-03 15:12:55,891 | INFO     | . get job = 0 s
[2025-12-03 10:14:06] 2025-12-03 15:12:55,891 | INFO     | . initial setup = 3 s
[2025-12-03 10:14:06] 2025-12-03 15:12:55,891 | INFO     | . payload setup = 27 s
[2025-12-03 10:14:06] 2025-12-03 15:12:55,891 | INFO     | . stage-in = 0 s
[2025-12-03 10:14:06] 2025-12-03 15:12:55,892 | INFO     | . payload execution = 27130 s
[2025-12-03 10:14:06] 2025-12-03 15:12:55,892 | INFO     | . stage-out = 7 s
[2025-12-03 10:14:06] 2025-12-03 15:12:55,892 | INFO     | . log creation = 2 s
[2025-12-03 10:14:06] 2025-12-03 15:12:55,892 | INFO     | ..............................
[2025-12-03 10:14:06] 2025-12-03 15:12:56,722 | INFO     | 
[2025-12-03 10:14:06] 2025-12-03 15:12:56,722 | INFO     | job summary report
[2025-12-03 10:14:06] 2025-12-03 15:12:56,722 | INFO     | --------------------------------------------------
[2025-12-03 10:14:06] 2025-12-03 15:12:56,722 | INFO     | PanDA job id: 6895375685
[2025-12-03 10:14:06] 2025-12-03 15:12:56,722 | INFO     | task id: 47556137
[2025-12-03 10:14:06] 2025-12-03 15:12:56,722 | INFO     | errors: (none)
[2025-12-03 10:14:06] 2025-12-03 15:12:56,722 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 10:14:06] 2025-12-03 15:12:56,722 | INFO     | pilot state: finished 
[2025-12-03 10:14:06] 2025-12-03 15:12:56,722 | INFO     | transexitcode: 0
[2025-12-03 10:14:06] 2025-12-03 15:12:56,722 | INFO     | exeerrorcode: 0
[2025-12-03 10:14:06] 2025-12-03 15:12:56,722 | INFO     | exeerrordiag: 
[2025-12-03 10:14:06] 2025-12-03 15:12:56,723 | INFO     | exitcode: 0
[2025-12-03 10:14:06] 2025-12-03 15:12:56,723 | INFO     | exitmsg: OK
[2025-12-03 10:14:06] 2025-12-03 15:12:56,723 | INFO     | cpuconsumptiontime: 134719 s
[2025-12-03 10:14:06] 2025-12-03 15:12:56,723 | INFO     | nevents: 1000
[2025-12-03 10:14:06] 2025-12-03 15:12:56,723 | INFO     | neventsw: 0
[2025-12-03 10:14:06] 2025-12-03 15:12:56,723 | INFO     | pid: 3450330
[2025-12-03 10:14:06] 2025-12-03 15:12:56,723 | INFO     | pgrp: 3450330
[2025-12-03 10:14:06] 2025-12-03 15:12:56,723 | INFO     | corecount: 8
[2025-12-03 10:14:06] 2025-12-03 15:12:56,727 | INFO     | event service: False
[2025-12-03 10:14:06] 2025-12-03 15:12:56,727 | INFO     | sizes: {0: 2284144, 1: 2284315, 2: 2284371, 13: 2284371, 18: 2284689, 23: 2284717, 27162: 2322190, 27170: 2331184, 27171: 2331240, 27186: 2331486}
[2025-12-03 10:14:06] 2025-12-03 15:12:56,727 | INFO     | --------------------------------------------------
[2025-12-03 10:14:06] 2025-12-03 15:12:56,727 | INFO     | 
[2025-12-03 10:14:06] 2025-12-03 15:12:56,727 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-12-03 10:14:06] 2025-12-03 15:12:56,839 | INFO     | PID=3411350 has CPU usage=13.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-12-03 10:14:06] 2025-12-03 15:12:56,839 | INFO     | .. there are 61 such processes running
[2025-12-03 10:14:06] 2025-12-03 15:12:56,872 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 10:14:06] 2025-12-03 15:12:56,872 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 10:14:06] 2025-12-03 15:12:56,872 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 10:14:06] 2025-12-03 15:12:56,872 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 10:14:06] 2025-12-03 15:12:56,873 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 10:14:06] 2025-12-03 15:12:56,873 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 10:14:06] 2025-12-03 15:12:56,873 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 10:14:06] 2025-12-03 15:12:56,873 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 10:14:06] 2025-12-03 15:12:56,873 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 10:14:06] 2025-12-03 15:12:56,873 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 10:14:06] 2025-12-03 15:12:56,873 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 10:14:06] 2025-12-03 15:12:56,873 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 10:14:06] 2025-12-03 15:12:56,873 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 10:14:06] 2025-12-03 15:12:56,873 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 10:14:06] 2025-12-03 15:12:56,873 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 10:14:06] 2025-12-03 15:12:56,873 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 10:14:06] 2025-12-03 15:12:56,873 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 10:14:06] 2025-12-03 15:12:56,873 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 10:14:06] 2025-12-03 15:12:56,873 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 10:14:06] 2025-12-03 15:12:56,873 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 10:14:06] 2025-12-03 15:12:56,873 | INFO     | job 6895375685 has completed (purged errors)
[2025-12-03 10:14:06] 2025-12-03 15:12:56,873 | INFO     | overall cleanup function is called
[2025-12-03 10:14:06] 2025-12-03 15:12:57,945 | INFO     | --- collectZombieJob: --- 10, [3450330]
[2025-12-03 10:14:06] 2025-12-03 15:12:57,945 | INFO     | zombie collector waiting for pid 3450330
[2025-12-03 10:14:06] 2025-12-03 15:12:57,945 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 10:14:06] 2025-12-03 15:12:57,945 | INFO     | collected zombie processes
[2025-12-03 10:14:06] 2025-12-03 15:12:57,945 | INFO     | will attempt to kill all subprocesses of pid=3450330
[2025-12-03 10:14:06] 2025-12-03 15:13:00,176 | INFO     | process IDs to be killed: [3450330] (in reverse order)
[2025-12-03 10:14:06] 2025-12-03 15:13:00,550 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 10:14:06] 2025-12-03 15:13:00,551 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 10:14:06] 2025-12-03 15:13:00,584 | INFO     | did not find any defunct processes belonging to 3450330
[2025-12-03 10:14:06] 2025-12-03 15:13:00,774 | INFO     | did not find any defunct processes belonging to 3450330
[2025-12-03 10:14:06] 2025-12-03 15:13:00,778 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 10:14:06] 2025-12-03 15:13:00,779 | INFO     | ready for new job
[2025-12-03 10:14:06] 2025-12-03 15:13:00,779 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 10:14:06] 2025-12-03 15:13:00,780 | INFO     | ***************************************
[2025-12-03 10:14:06] 2025-12-03 15:13:00,780 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 10:14:06] 2025-12-03 15:13:00,780 | INFO     | ***************************************
[2025-12-03 10:14:06] 2025-12-03 15:13:00,780 | INFO     | 
[2025-12-03 10:14:06] 2025-12-03 15:13:00,789 | INFO     | architecture information:
[2025-12-03 10:14:06] 2025-12-03 15:13:00,792 | INFO     | executing command: cat /etc/os-release
[2025-12-03 10:14:06] 2025-12-03 15:13:00,847 | INFO     | cat /etc/os-release:
[2025-12-03 10:14:06] NAME="CentOS Linux"
[2025-12-03 10:14:06] VERSION="7 (Core)"
[2025-12-03 10:14:06] ID="centos"
[2025-12-03 10:14:06] ID_LIKE="rhel fedora"
[2025-12-03 10:14:06] VERSION_ID="7"
[2025-12-03 10:14:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 10:14:06] ANSI_COLOR="0;31"
[2025-12-03 10:14:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 10:14:06] HOME_URL="https://www.centos.org/"
[2025-12-03 10:14:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 10:14:06] 
[2025-12-03 10:14:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 10:14:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 10:14:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 10:14:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 10:14:06] 
[2025-12-03 10:14:06] 2025-12-03 15:13:00,848 | INFO     | ***************************************
[2025-12-03 10:14:06] 2025-12-03 15:13:01,351 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-12-03 10:14:06] 2025-12-03 15:13:01,388 | INFO     | sufficient remaining disk space (91186266112 B)
[2025-12-03 10:14:06] 2025-12-03 15:13:01,388 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 10:14:06] 2025-12-03 15:13:01,389 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 10:14:06] 2025-12-03 15:13:01,389 | INFO     | update_server=False
[2025-12-03 10:14:06] 2025-12-03 15:13:01,389 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 10:14:06] 2025-12-03 15:13:01,389 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 10:14:06] 2025-12-03 15:13:01,389 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 10:14:06] 2025-12-03 15:13:01,470 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 10:14:06] 2025-12-03 15:13:01,865 | INFO     | all job control threads have been joined
[2025-12-03 10:14:06] 2025-12-03 15:13:01,970 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 10:14:06] 2025-12-03 15:13:01,970 | INFO     | aborting loop
[2025-12-03 10:14:06] 2025-12-03 15:13:01,991 | INFO     | all data control threads have been joined
[2025-12-03 10:14:06] 2025-12-03 15:13:02,078 | INFO     | all payload control threads have been joined
[2025-12-03 10:14:06] 2025-12-03 15:13:02,396 | INFO     | [job] retrieve thread has finished
[2025-12-03 10:14:06] 2025-12-03 15:13:02,475 | INFO     | [job] queue monitor thread has finished
[2025-12-03 10:14:06] 2025-12-03 15:13:02,870 | INFO     | [job] control thread has finished
[2025-12-03 10:14:06] 2025-12-03 15:13:02,976 | INFO     | [job] job monitor thread has finished
[2025-12-03 10:14:06] 2025-12-03 15:13:02,981 | INFO     | [job] validate thread has finished
[2025-12-03 10:14:06] 2025-12-03 15:13:02,997 | INFO     | [data] control thread has finished
[2025-12-03 10:14:06] 2025-12-03 15:13:03,085 | INFO     | [payload] control thread has finished
[2025-12-03 10:14:06] 2025-12-03 15:13:03,109 | INFO     | [data] copytool_in thread has finished
[2025-12-03 10:14:06] 2025-12-03 15:13:03,273 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 10:14:06] 2025-12-03 15:13:03,317 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 10:14:06] 2025-12-03 15:13:03,414 | INFO     | [data] copytool_out thread has finished
[2025-12-03 10:14:06] 2025-12-03 15:13:03,684 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 10:14:06] 2025-12-03 15:13:03,753 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 10:14:06] 2025-12-03 15:13:03,977 | INFO     | [payload] validate_post thread has finished
[2025-12-03 10:14:06] 2025-12-03 15:13:03,977 | INFO     | [payload] failed_post thread has finished
[2025-12-03 10:14:06] 2025-12-03 15:13:05,404 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 10:14:06] 2025-12-03 15:13:30,880 | INFO     | PID=3411350 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-03 10:14:06] 2025-12-03 15:13:30,881 | INFO     | .. there are 61 such processes running
[2025-12-03 10:14:06] 2025-12-03 15:13:30,881 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 10:14:06] 2025-12-03 15:13:30,881 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 10:14:06] 2025-12-03 15:13:30,881 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 10:14:06] 2025-12-03 15:13:58,834 | INFO     | [monitor] cgroup control has ended
[2025-12-03 10:14:06] 2025-12-03 15:14:00,087 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139637856450368)>', '<ExcThread(monitor, started 139637196564224)>']
[2025-12-03 10:14:06] 2025-12-03 15:14:01,090 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 10:14:06] 2025-12-03 15:14:01,090 | INFO     | [monitor] control thread has ended
[2025-12-03 10:14:06] 2025-12-03 15:14:05,113 | INFO     | all workflow threads have been joined
[2025-12-03 10:14:06] 2025-12-03 15:14:05,113 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 10:14:06] 2025-12-03 15:14:05,113 | INFO     | traces error code: 0
[2025-12-03 10:14:06] 2025-12-03 15:14:05,113 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 10:14:06] 2025-12-03 15:14:05,990 [wrapper] ==== pilot stdout END ====
[2025-12-03 10:14:06] 2025-12-03 15:14:05,993 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 10:14:06] 2025-12-03 15:14:05,995 [wrapper] pilotpid: 3411350
[2025-12-03 10:14:06] 2025-12-03 15:14:05,999 [wrapper] Pilot exit status: 0
[2025-12-03 10:14:06] 2025-12-03 15:14:06,026 [wrapper] pandaids: 6895375685
[2025-12-03 10:14:06] 2025-12-03 15:14:06,161 [wrapper] cleanup supervisor_pilot 2505915 3411351
[2025-12-03 10:14:06] 2025-12-03 15:14:06,180 [wrapper] Test setup, not cleaning
[2025-12-03 10:14:06] 2025-12-03 15:14:06,195 [wrapper] apfmon messages muted
[2025-12-03 10:14:06] 2025-12-03 15:14:06,225 [wrapper] ==== wrapper stdout END ====
[2025-12-03 10:14:06] 2025-12-03 15:14:06,232 [wrapper] ==== wrapper stderr END ====
[2025-12-03 10:14:06]  *** Error codes and diagnostics ***
[2025-12-03 10:14:06]     "exeErrorCode": 0,
[2025-12-03 10:14:06]     "exeErrorDiag": "",
[2025-12-03 10:14:06]     "pilotErrorCode": 0,
[2025-12-03 10:14:06]     "pilotErrorDiag": "",
[2025-12-03 10:14:06]  *** Listing of results directory ***
[2025-12-03 10:14:06] total 1317112
[2025-12-03 10:14:06] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 18:11 pilot3.tar.gz
[2025-12-03 10:14:06] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 19:02 queuedata.json
[2025-12-03 10:14:06] -rwx------. 1 boincer umatlas     36292 Nov 23 19:02 runpilot2-wrapper.sh
[2025-12-03 10:14:06] -rw-r--r--. 1 boincer umatlas       100 Dec  3 02:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 10:14:06] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  3 02:38 run_atlas
[2025-12-03 10:14:06] -rw-r--r--. 1 boincer umatlas       105 Dec  3 02:38 job.xml
[2025-12-03 10:14:06] -rw-r--r--. 2 boincer umatlas 409491341 Dec  3 02:38 EVNT.47483658._000955.pool.root.1
[2025-12-03 10:14:06] -rw-r--r--. 2 boincer umatlas     15847 Dec  3 02:38 start_atlas.sh
[2025-12-03 10:14:06] drwxrwx--x. 2 boincer umatlas      4096 Dec  3 02:38 shared
[2025-12-03 10:14:06] -rw-r--r--. 2 boincer umatlas    590104 Dec  3 02:38 input.tar.gz
[2025-12-03 10:14:06] -rw-r--r--. 1 boincer umatlas         0 Dec  3 02:38 boinc_lockfile
[2025-12-03 10:14:06] -rw-r--r--. 1 boincer umatlas      2786 Dec  3 02:38 pandaJob.out
[2025-12-03 10:14:06] -rw-------. 1 boincer umatlas        57 Dec  3 02:38 setup.sh.local
[2025-12-03 10:14:06] -rw-------. 1 boincer umatlas    985779 Dec  3 02:39 agis_schedconf.cvmfs.json
[2025-12-03 10:14:06] drwx------. 5 boincer umatlas      4096 Dec  3 02:39 pilot3
[2025-12-03 10:14:06] -rw-r--r--. 1 boincer umatlas       533 Dec  3 10:04 boinc_task_state.xml
[2025-12-03 10:14:06] -rw-------. 1 boincer umatlas 925301571 Dec  3 10:12 HITS.47556137._009416.pool.root.1
[2025-12-03 10:14:06] -rw-------. 1 boincer umatlas      1082 Dec  3 10:12 memory_monitor_summary.json
[2025-12-03 10:14:06] -rw-------. 1 boincer umatlas   1516240 Dec  3 10:12 agis_ddmendpoints.agis.ALL.json
[2025-12-03 10:14:06] -rw-------. 1 boincer umatlas   1702946 Dec  3 10:12 log.47556137._009416.job.log.tgz.1
[2025-12-03 10:14:06] -rw-------. 1 boincer umatlas        95 Dec  3 10:12 pilot_heartbeat.json
[2025-12-03 10:14:06] -rw-r--r--. 1 boincer umatlas      7172 Dec  3 10:12 init_data.xml
[2025-12-03 10:14:06] -rw-------. 1 boincer umatlas      8633 Dec  3 10:12 heartbeat.json
[2025-12-03 10:14:06] -rw-r--r--. 1 boincer umatlas      8192 Dec  3 10:14 boinc_mmap_file
[2025-12-03 10:14:06] -rw-r--r--. 1 boincer umatlas        29 Dec  3 10:14 wrapper_checkpoint.txt
[2025-12-03 10:14:06] -rw-------. 1 boincer umatlas      4824 Dec  3 10:14 pilotlog.txt
[2025-12-03 10:14:06] -rw-------. 1 boincer umatlas   3303268 Dec  3 10:14 log.47556137._009416.job.log.1
[2025-12-03 10:14:06] -rw-------. 1 boincer umatlas       353 Dec  3 10:14 output.list
[2025-12-03 10:14:06] -rw-r--r--. 1 boincer umatlas       620 Dec  3 10:14 runtime_log
[2025-12-03 10:14:06] -rw-------. 1 boincer umatlas   5027840 Dec  3 10:14 result.tar.gz
[2025-12-03 10:14:06] -rw-r--r--. 1 boincer umatlas      9333 Dec  3 10:14 runtime_log.err
[2025-12-03 10:14:06] -rw-------. 1 boincer umatlas       664 Dec  3 10:14 LxJODmsDZh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmVqIKDmhe1SIn.diag
[2025-12-03 10:14:06] -rw-r--r--. 1 boincer umatlas     21332 Dec  3 10:14 stderr.txt
[2025-12-03 10:14:06] HITS file was successfully produced:
[2025-12-03 10:14:06] -rw-------. 1 boincer umatlas 925301571 Dec  3 10:12 shared/HITS.pool.root.1
[2025-12-03 10:14:06]  *** Contents of shared directory: ***
[2025-12-03 10:14:06] total 1309028
[2025-12-03 10:14:06] -rw-r--r--. 2 boincer umatlas 409491341 Dec  3 02:38 ATLAS.root_0
[2025-12-03 10:14:06] -rw-r--r--. 2 boincer umatlas     15847 Dec  3 02:38 start_atlas.sh
[2025-12-03 10:14:06] -rw-r--r--. 2 boincer umatlas    590104 Dec  3 02:38 input.tar.gz
[2025-12-03 10:14:06] -rw-------. 1 boincer umatlas 925301571 Dec  3 10:12 HITS.pool.root.1
[2025-12-03 10:14:06] -rw-------. 1 boincer umatlas   5027840 Dec  3 10:14 result.tar.gz
10:14:08 (3391545): run_atlas exited; CPU time 135046.818781
10:14:08 (3391545): called boinc_finish(0)

</stderr_txt>
]]>

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