Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:37:49 (3379655): wrapper (7.7.26015): starting
02:37:49 (3379655): wrapper: running run_atlas (--nthreads 8)
[2025-12-03 02:37:49] Arguments: --nthreads 8
[2025-12-03 02:37:49] Threads: 8
[2025-12-03 02:37:49] Checking for CVMFS
[2025-12-03 02:37:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-03 02:37:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-03 02:37:50] Running cvmfs_config stat atlas.cern.ch
[2025-12-03 02:37:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-03 02:37:51] 2.13.3.0 12357 39793 297312 153585 3 449 22024414 32503808 30168 16776704 0 635125250 99.625 571218977 45281 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-03 02:37:51] CVMFS is ok
[2025-12-03 02:37:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-03 02:37:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-03 02:37:51] Further information can be found at the LHC@home message board.
[2025-12-03 02:37:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-03 02:37:51] Checking for apptainer binary...
[2025-12-03 02:37:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-03 02:37:51] Running /usr/bin/apptainer --version
[2025-12-03 02:37:51] apptainer version 1.4.4-1.el9
[2025-12-03 02:37:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-03 02:37:52] c8-7-2.aglt2.org
[2025-12-03 02:37:52] apptainer works
[2025-12-03 02:37:52] Set ATHENA_PROC_NUMBER=8
[2025-12-03 02:37:52] Set ATHENA_CORE_NUMBER=8
[2025-12-03 02:37:52] Starting ATLAS job with PandaID=6894281575
[2025-12-03 02:37:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 10:35:32]  *** The last 200 lines of the pilot log: ***
[2025-12-03 10:35:32] 2025-12-03 15:34:43,701 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 10:35:32] 2025-12-03 15:34:43,701 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 10:35:32] 2025-12-03 15:34:43,706 | INFO     | fitting pss+swap vs Time
[2025-12-03 10:35:32] 2025-12-03 15:34:43,706 | INFO     | sum of square deviations: 31584061258.030025
[2025-12-03 10:35:32] 2025-12-03 15:34:43,709 | INFO     | sum of deviations: 98345483331.33398
[2025-12-03 10:35:32] 2025-12-03 15:34:43,709 | INFO     | mean x: 1764761817.2997859
[2025-12-03 10:35:32] 2025-12-03 15:34:43,709 | INFO     | mean y: 2810848.340471092
[2025-12-03 10:35:32] 2025-12-03 15:34:43,709 | INFO     | intersect: -5492250488.741544
[2025-12-03 10:35:32] 2025-12-03 15:34:43,710 | INFO     | chi2: 11.253649290778528
[2025-12-03 10:35:32] 2025-12-03 15:34:43,710 | INFO     | sum of square deviations: 30580683381.991173
[2025-12-03 10:35:32] 2025-12-03 15:34:43,713 | INFO     | sum of deviations: 248521619443.11694
[2025-12-03 10:35:32] 2025-12-03 15:34:43,713 | INFO     | mean x: 1764761664.8138528
[2025-12-03 10:35:32] 2025-12-03 15:34:43,713 | INFO     | mean y: 2833660.512987013
[2025-12-03 10:35:32] 2025-12-03 15:34:43,713 | INFO     | intersect: -14338946128.781992
[2025-12-03 10:35:32] 2025-12-03 15:34:43,713 | INFO     | chi2: 7.981494614019416
[2025-12-03 10:35:32] 2025-12-03 15:34:43,713 | INFO     | current chi2=7.981494614019416 (change=29.076387509608836 %)
[2025-12-03 10:35:32] 2025-12-03 15:34:43,713 | INFO     | sum of square deviations: 29598794280.765846
[2025-12-03 10:35:32] 2025-12-03 15:34:43,716 | INFO     | sum of deviations: 405165929045.62396
[2025-12-03 10:35:32] 2025-12-03 15:34:43,716 | INFO     | mean x: 1764761512.3282275
[2025-12-03 10:35:32] 2025-12-03 15:34:43,716 | INFO     | mean y: 2857999.695842451
[2025-12-03 10:35:32] 2025-12-03 15:34:43,716 | INFO     | intersect: -24154248904.86034
[2025-12-03 10:35:32] 2025-12-03 15:34:43,717 | INFO     | chi2: 4.604358037543168
[2025-12-03 10:35:32] 2025-12-03 15:34:43,717 | INFO     | current chi2=4.604358037543168 (change=42.312082382970495 %)
[2025-12-03 10:35:32] 2025-12-03 15:34:43,717 | INFO     | sum of square deviations: 28638161391.847134
[2025-12-03 10:35:32] 2025-12-03 15:34:43,720 | INFO     | sum of deviations: 503575242523.516
[2025-12-03 10:35:32] 2025-12-03 15:34:43,720 | INFO     | mean x: 1764761359.8429203
[2025-12-03 10:35:32] 2025-12-03 15:34:43,720 | INFO     | mean y: 2873558.457964602
[2025-12-03 10:35:32] 2025-12-03 15:34:43,720 | INFO     | intersect: -31028801890.93124
[2025-12-03 10:35:32] 2025-12-03 15:34:43,720 | INFO     | chi2: 2.6694888623038984
[2025-12-03 10:35:32] 2025-12-03 15:34:43,720 | INFO     | current chi2=2.6694888623038984 (change=42.02256122270833 %)
[2025-12-03 10:35:32] 2025-12-03 15:34:43,720 | INFO     | sum of square deviations: 27698414301.252842
[2025-12-03 10:35:32] 2025-12-03 15:34:43,723 | INFO     | sum of deviations: 492292737214.3943
[2025-12-03 10:35:32] 2025-12-03 15:34:43,723 | INFO     | mean x: 1764761207.3467562
[2025-12-03 10:35:32] 2025-12-03 15:34:43,723 | INFO     | mean y: 2871728.8232662193
[2025-12-03 10:35:32] 2025-12-03 15:34:43,723 | INFO     | intersect: -31362791151.56833
[2025-12-03 10:35:32] 2025-12-03 15:34:43,724 | INFO     | chi2: 2.6681788392266053
[2025-12-03 10:35:32] 2025-12-03 15:34:43,724 | INFO     | current chi2=2.6681788392266053 (change=0.04907392931253875 %)
[2025-12-03 10:35:32] 2025-12-03 15:34:43,724 | INFO     | right removable region: 446
[2025-12-03 10:35:32] 2025-12-03 15:34:43,724 | INFO     | sum of square deviations: 30580313111.99114
[2025-12-03 10:35:32] 2025-12-03 15:34:43,727 | INFO     | sum of deviations: -33946166316.316216
[2025-12-03 10:35:32] 2025-12-03 15:34:43,727 | INFO     | mean x: 1764761969.8138528
[2025-12-03 10:35:32] 2025-12-03 15:34:43,727 | INFO     | mean y: 2830900.2056277054
[2025-12-03 10:35:32] 2025-12-03 15:34:43,727 | INFO     | intersect: 1961833187.6125605
[2025-12-03 10:35:32] 2025-12-03 15:34:43,727 | INFO     | chi2: 8.824821285597844
[2025-12-03 10:35:32] 2025-12-03 15:34:43,727 | INFO     | current chi2=8.824821285597844 (change=21.5825812802867 %)
[2025-12-03 10:35:32] 2025-12-03 15:34:43,727 | INFO     | left removable region: 10
[2025-12-03 10:35:32] 2025-12-03 15:34:43,727 | INFO     | sum of square deviations: 25703340532.284264
[2025-12-03 10:35:32] 2025-12-03 15:34:43,730 | INFO     | sum of deviations: 328294965437.2982
[2025-12-03 10:35:32] 2025-12-03 15:34:43,730 | INFO     | mean x: 1764761481.8669724
[2025-12-03 10:35:32] 2025-12-03 15:34:43,730 | INFO     | mean y: 2898445.2637614678
[2025-12-03 10:35:32] 2025-12-03 15:34:43,730 | INFO     | intersect: -22537452252.222206
[2025-12-03 10:35:32] 2025-12-03 15:34:43,731 | INFO     | chi2: 0.056171270362983985
[2025-12-03 10:35:32] 2025-12-03 15:34:43,731 | INFO     | current memory leak: 12.77 B/s (using 436 data points, chi2=0.06)
[2025-12-03 10:35:32] 2025-12-03 15:34:43,731 | INFO     | could have reported an average CPU frequency of 3775 MHz (19 samples)
[2025-12-03 10:35:32] 2025-12-03 15:34:43,731 | INFO     | ..............................
[2025-12-03 10:35:32] 2025-12-03 15:34:43,731 | INFO     | . Timing measurements:
[2025-12-03 10:35:32] 2025-12-03 15:34:43,731 | INFO     | . get job = 0 s
[2025-12-03 10:35:32] 2025-12-03 15:34:43,731 | INFO     | . initial setup = 4 s
[2025-12-03 10:35:32] 2025-12-03 15:34:43,731 | INFO     | . payload setup = 25 s
[2025-12-03 10:35:32] 2025-12-03 15:34:43,731 | INFO     | . stage-in = 0 s
[2025-12-03 10:35:32] 2025-12-03 15:34:43,731 | INFO     | . payload execution = 28473 s
[2025-12-03 10:35:32] 2025-12-03 15:34:43,731 | INFO     | . stage-out = 4 s
[2025-12-03 10:35:32] 2025-12-03 15:34:43,732 | INFO     | . log creation = 1 s
[2025-12-03 10:35:32] 2025-12-03 15:34:43,732 | INFO     | ..............................
[2025-12-03 10:35:32] 2025-12-03 15:34:43,814 | INFO     | 
[2025-12-03 10:35:32] 2025-12-03 15:34:43,814 | INFO     | job summary report
[2025-12-03 10:35:32] 2025-12-03 15:34:43,814 | INFO     | --------------------------------------------------
[2025-12-03 10:35:32] 2025-12-03 15:34:43,814 | INFO     | PanDA job id: 6894281575
[2025-12-03 10:35:32] 2025-12-03 15:34:43,814 | INFO     | task id: 47533967
[2025-12-03 10:35:32] 2025-12-03 15:34:43,815 | INFO     | errors: (none)
[2025-12-03 10:35:32] 2025-12-03 15:34:43,815 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 10:35:32] 2025-12-03 15:34:43,815 | INFO     | pilot state: finished 
[2025-12-03 10:35:32] 2025-12-03 15:34:43,815 | INFO     | transexitcode: 0
[2025-12-03 10:35:32] 2025-12-03 15:34:43,815 | INFO     | exeerrorcode: 0
[2025-12-03 10:35:32] 2025-12-03 15:34:43,815 | INFO     | exeerrordiag: 
[2025-12-03 10:35:32] 2025-12-03 15:34:43,815 | INFO     | exitcode: 0
[2025-12-03 10:35:32] 2025-12-03 15:34:43,815 | INFO     | exitmsg: OK
[2025-12-03 10:35:32] 2025-12-03 15:34:43,815 | INFO     | cpuconsumptiontime: 134090 s
[2025-12-03 10:35:32] 2025-12-03 15:34:43,815 | INFO     | nevents: 1000
[2025-12-03 10:35:32] 2025-12-03 15:34:43,815 | INFO     | neventsw: 0
[2025-12-03 10:35:32] 2025-12-03 15:34:43,815 | INFO     | pid: 3427885
[2025-12-03 10:35:32] 2025-12-03 15:34:43,815 | INFO     | pgrp: 3427885
[2025-12-03 10:35:32] 2025-12-03 15:34:43,815 | INFO     | corecount: 8
[2025-12-03 10:35:32] 2025-12-03 15:34:43,815 | INFO     | event service: False
[2025-12-03 10:35:32] 2025-12-03 15:34:43,815 | INFO     | sizes: {0: 2284144, 1: 2284343, 12: 2284343, 20: 2284633, 23: 2284661, 28503: 2322666, 28508: 2331660, 28509: 2331716, 28528: 2331962}
[2025-12-03 10:35:32] 2025-12-03 15:34:43,815 | INFO     | --------------------------------------------------
[2025-12-03 10:35:32] 2025-12-03 15:34:43,815 | INFO     | 
[2025-12-03 10:35:32] 2025-12-03 15:34:43,815 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-03 10:35:32] 2025-12-03 15:34:43,898 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 10:35:32] 2025-12-03 15:34:43,898 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 10:35:32] 2025-12-03 15:34:43,898 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 10:35:32] 2025-12-03 15:34:43,898 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 10:35:32] 2025-12-03 15:34:43,898 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 10:35:32] 2025-12-03 15:34:43,898 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 10:35:32] 2025-12-03 15:34:43,899 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 10:35:32] 2025-12-03 15:34:43,899 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 10:35:32] 2025-12-03 15:34:43,899 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 10:35:32] 2025-12-03 15:34:43,899 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 10:35:32] 2025-12-03 15:34:43,899 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 10:35:32] 2025-12-03 15:34:43,899 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 10:35:32] 2025-12-03 15:34:43,899 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 10:35:32] 2025-12-03 15:34:43,899 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 10:35:32] 2025-12-03 15:34:43,899 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 10:35:32] 2025-12-03 15:34:43,899 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 10:35:32] 2025-12-03 15:34:43,899 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 10:35:32] 2025-12-03 15:34:43,899 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 10:35:32] 2025-12-03 15:34:43,899 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 10:35:32] 2025-12-03 15:34:43,899 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 10:35:32] 2025-12-03 15:34:43,899 | INFO     | job 6894281575 has completed (purged errors)
[2025-12-03 10:35:32] 2025-12-03 15:34:43,899 | INFO     | overall cleanup function is called
[2025-12-03 10:35:32] 2025-12-03 15:34:44,949 | INFO     | --- collectZombieJob: --- 10, [3427885]
[2025-12-03 10:35:32] 2025-12-03 15:34:44,949 | INFO     | zombie collector waiting for pid 3427885
[2025-12-03 10:35:32] 2025-12-03 15:34:44,949 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 10:35:32] 2025-12-03 15:34:44,949 | INFO     | collected zombie processes
[2025-12-03 10:35:32] 2025-12-03 15:34:44,949 | INFO     | will attempt to kill all subprocesses of pid=3427885
[2025-12-03 10:35:32] 2025-12-03 15:34:46,116 | INFO     | process IDs to be killed: [3427885] (in reverse order)
[2025-12-03 10:35:32] 2025-12-03 15:34:46,403 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 10:35:32] 2025-12-03 15:34:46,403 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 10:35:32] 2025-12-03 15:34:46,432 | INFO     | did not find any defunct processes belonging to 3427885
[2025-12-03 10:35:32] 2025-12-03 15:34:46,460 | INFO     | did not find any defunct processes belonging to 3427885
[2025-12-03 10:35:32] 2025-12-03 15:34:46,461 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 10:35:32] 2025-12-03 15:34:46,461 | INFO     | ready for new job
[2025-12-03 10:35:32] 2025-12-03 15:34:46,461 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 10:35:32] 2025-12-03 15:34:46,463 | INFO     | ***************************************
[2025-12-03 10:35:32] 2025-12-03 15:34:46,463 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 10:35:32] 2025-12-03 15:34:46,463 | INFO     | ***************************************
[2025-12-03 10:35:32] 2025-12-03 15:34:46,463 | INFO     | 
[2025-12-03 10:35:32] 2025-12-03 15:34:46,468 | INFO     | architecture information:
[2025-12-03 10:35:32] 2025-12-03 15:34:46,468 | INFO     | executing command: cat /etc/os-release
[2025-12-03 10:35:32] 2025-12-03 15:34:46,490 | INFO     | cat /etc/os-release:
[2025-12-03 10:35:32] NAME="CentOS Linux"
[2025-12-03 10:35:32] VERSION="7 (Core)"
[2025-12-03 10:35:32] ID="centos"
[2025-12-03 10:35:32] ID_LIKE="rhel fedora"
[2025-12-03 10:35:32] VERSION_ID="7"
[2025-12-03 10:35:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 10:35:32] ANSI_COLOR="0;31"
[2025-12-03 10:35:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 10:35:32] HOME_URL="https://www.centos.org/"
[2025-12-03 10:35:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 10:35:32] 
[2025-12-03 10:35:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 10:35:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 10:35:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 10:35:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 10:35:32] 
[2025-12-03 10:35:32] 2025-12-03 15:34:46,490 | INFO     | ***************************************
[2025-12-03 10:35:32] 2025-12-03 15:34:46,994 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-03 10:35:32] 2025-12-03 15:34:47,011 | INFO     | sufficient remaining disk space (92822044672 B)
[2025-12-03 10:35:32] 2025-12-03 15:34:47,011 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 10:35:32] 2025-12-03 15:34:47,011 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 10:35:32] 2025-12-03 15:34:47,011 | INFO     | update_server=False
[2025-12-03 10:35:32] 2025-12-03 15:34:47,011 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 10:35:32] 2025-12-03 15:34:47,012 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 10:35:32] 2025-12-03 15:34:47,012 | INFO     | aborting loop
[2025-12-03 10:35:32] 2025-12-03 15:34:47,012 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 10:35:32] 2025-12-03 15:34:47,177 | INFO     | all data control threads have been joined
[2025-12-03 10:35:32] 2025-12-03 15:34:48,027 | INFO     | [job] retrieve thread has finished
[2025-12-03 10:35:32] 2025-12-03 15:34:48,027 | INFO     | [job] job monitor thread has finished
[2025-12-03 10:35:32] 2025-12-03 15:34:48,167 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 10:35:32] 2025-12-03 15:34:48,170 | INFO     | all job control threads have been joined
[2025-12-03 10:35:32] 2025-12-03 15:34:48,183 | INFO     | [data] control thread has finished
[2025-12-03 10:35:32] 2025-12-03 15:34:48,434 | INFO     | all payload control threads have been joined
[2025-12-03 10:35:32] 2025-12-03 15:34:48,449 | INFO     | [data] copytool_in thread has finished
[2025-12-03 10:35:32] 2025-12-03 15:34:48,485 | INFO     | [job] validate thread has finished
[2025-12-03 10:35:32] 2025-12-03 15:34:48,601 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 10:35:32] 2025-12-03 15:34:48,889 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 10:35:32] 2025-12-03 15:34:48,995 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 10:35:32] 2025-12-03 15:34:49,018 | INFO     | [data] copytool_out thread has finished
[2025-12-03 10:35:32] 2025-12-03 15:34:49,110 | INFO     | [payload] validate_post thread has finished
[2025-12-03 10:35:32] 2025-12-03 15:34:49,176 | INFO     | [job] control thread has finished
[2025-12-03 10:35:32] 2025-12-03 15:34:49,188 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 10:35:32] 2025-12-03 15:34:49,281 | INFO     | [payload] failed_post thread has finished
[2025-12-03 10:35:32] 2025-12-03 15:34:49,344 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 10:35:32] 2025-12-03 15:34:49,440 | INFO     | [payload] control thread has finished
[2025-12-03 10:35:32] 2025-12-03 15:34:49,894 | INFO     | [job] queue monitor thread has finished
[2025-12-03 10:35:32] 2025-12-03 15:34:52,610 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 10:35:32] 2025-12-03 15:35:16,371 | INFO     | PID=3395368 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-03 10:35:32] 2025-12-03 15:35:16,371 | INFO     | .. there are 63 such processes running
[2025-12-03 10:35:32] 2025-12-03 15:35:16,372 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 10:35:32] 2025-12-03 15:35:16,372 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 10:35:32] 2025-12-03 15:35:16,372 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 10:35:32] 2025-12-03 15:35:26,517 | INFO     | [monitor] cgroup control has ended
[2025-12-03 10:35:32] 2025-12-03 15:35:26,531 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140110967809856)>', '<ExcThread(monitor, started 140110322448128)>']
[2025-12-03 10:35:32] 2025-12-03 15:35:27,450 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 10:35:32] 2025-12-03 15:35:27,450 | INFO     | [monitor] control thread has ended
[2025-12-03 10:35:32] 2025-12-03 15:35:31,557 | INFO     | all workflow threads have been joined
[2025-12-03 10:35:32] 2025-12-03 15:35:31,557 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 10:35:32] 2025-12-03 15:35:31,557 | INFO     | traces error code: 0
[2025-12-03 10:35:32] 2025-12-03 15:35:31,557 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 10:35:32] 2025-12-03 15:35:31,801 [wrapper] ==== pilot stdout END ====
[2025-12-03 10:35:32] 2025-12-03 15:35:31,806 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 10:35:32] 2025-12-03 15:35:31,808 [wrapper] pilotpid: 3395368
[2025-12-03 10:35:32] 2025-12-03 15:35:31,811 [wrapper] Pilot exit status: 0
[2025-12-03 10:35:32] 2025-12-03 15:35:31,864 [wrapper] pandaids: 6894281575
[2025-12-03 10:35:32] 2025-12-03 15:35:32,046 [wrapper] cleanup supervisor_pilot 2789136 3395369
[2025-12-03 10:35:32] 2025-12-03 15:35:32,085 [wrapper] Test setup, not cleaning
[2025-12-03 10:35:32] 2025-12-03 15:35:32,131 [wrapper] apfmon messages muted
[2025-12-03 10:35:32] 2025-12-03 15:35:32,170 [wrapper] ==== wrapper stdout END ====
[2025-12-03 10:35:32] 2025-12-03 15:35:32,173 [wrapper] ==== wrapper stderr END ====
[2025-12-03 10:35:32]  *** Error codes and diagnostics ***
[2025-12-03 10:35:32]     "exeErrorCode": 0,
[2025-12-03 10:35:32]     "exeErrorDiag": "",
[2025-12-03 10:35:32]     "pilotErrorCode": 0,
[2025-12-03 10:35:32]     "pilotErrorDiag": "",
[2025-12-03 10:35:32]  *** Listing of results directory ***
[2025-12-03 10:35:32] total 1300728
[2025-12-03 10:35:32] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 04:12 pilot3.tar.gz
[2025-12-03 10:35:32] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 04:16 queuedata.json
[2025-12-03 10:35:32] -rwx------. 1 boincer umatlas     36292 Nov 21 04:17 runpilot2-wrapper.sh
[2025-12-03 10:35:32] -rw-r--r--. 1 boincer umatlas       100 Dec  3 02:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 10:35:32] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  3 02:37 run_atlas
[2025-12-03 10:35:32] -rw-r--r--. 1 boincer umatlas       105 Dec  3 02:37 job.xml
[2025-12-03 10:35:32] -rw-r--r--. 2 boincer umatlas 409170919 Dec  3 02:37 EVNT.47493127._002344.pool.root.1
[2025-12-03 10:35:32] -rw-r--r--. 2 boincer umatlas     15847 Dec  3 02:37 start_atlas.sh
[2025-12-03 10:35:32] drwxrwx--x. 2 boincer umatlas      4096 Dec  3 02:37 shared
[2025-12-03 10:35:32] -rw-r--r--. 2 boincer umatlas    590107 Dec  3 02:37 input.tar.gz
[2025-12-03 10:35:32] -rw-r--r--. 1 boincer umatlas         0 Dec  3 02:37 boinc_lockfile
[2025-12-03 10:35:32] -rw-r--r--. 1 boincer umatlas      2786 Dec  3 02:37 pandaJob.out
[2025-12-03 10:35:32] -rw-------. 1 boincer umatlas        57 Dec  3 02:37 setup.sh.local
[2025-12-03 10:35:32] -rw-------. 1 boincer umatlas    985779 Dec  3 02:38 agis_schedconf.cvmfs.json
[2025-12-03 10:35:32] drwx------. 5 boincer umatlas      4096 Dec  3 02:38 pilot3
[2025-12-03 10:35:32] -rw-r--r--. 1 boincer umatlas       533 Dec  3 10:18 boinc_task_state.xml
[2025-12-03 10:35:32] -rw-r--r--. 1 boincer umatlas      7171 Dec  3 10:30 init_data.xml
[2025-12-03 10:35:32] -rw-------. 1 boincer umatlas 908221351 Dec  3 10:33 HITS.47533967._003159.pool.root.1
[2025-12-03 10:35:32] -rw-------. 1 boincer umatlas      1070 Dec  3 10:34 memory_monitor_summary.json
[2025-12-03 10:35:32] -rw-------. 1 boincer umatlas   1516240 Dec  3 10:34 agis_ddmendpoints.agis.ALL.json
[2025-12-03 10:35:32] -rw-------. 1 boincer umatlas   1730889 Dec  3 10:34 log.47533967._003159.job.log.tgz.1
[2025-12-03 10:35:32] -rw-------. 1 boincer umatlas      8634 Dec  3 10:34 heartbeat.json
[2025-12-03 10:35:32] -rw-------. 1 boincer umatlas        95 Dec  3 10:35 pilot_heartbeat.json
[2025-12-03 10:35:32] -rw-------. 1 boincer umatlas      4824 Dec  3 10:35 pilotlog.txt
[2025-12-03 10:35:32] -rw-------. 1 boincer umatlas   3589251 Dec  3 10:35 log.47533967._003159.job.log.1
[2025-12-03 10:35:32] -rw-r--r--. 1 boincer umatlas      8192 Dec  3 10:35 boinc_mmap_file
[2025-12-03 10:35:32] -rw-------. 1 boincer umatlas       353 Dec  3 10:35 output.list
[2025-12-03 10:35:32] -rw-r--r--. 1 boincer umatlas       620 Dec  3 10:35 runtime_log
[2025-12-03 10:35:32] -rw-r--r--. 1 boincer umatlas        29 Dec  3 10:35 wrapper_checkpoint.txt
[2025-12-03 10:35:32] -rw-------. 1 boincer umatlas   5335040 Dec  3 10:35 result.tar.gz
[2025-12-03 10:35:32] -rw-r--r--. 1 boincer umatlas      9333 Dec  3 10:35 runtime_log.err
[2025-12-03 10:35:32] -rw-------. 1 boincer umatlas       664 Dec  3 10:35 HSJODmDScg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqUHKDmiutlFo.diag
[2025-12-03 10:35:32] -rw-r--r--. 1 boincer umatlas     21153 Dec  3 10:35 stderr.txt
[2025-12-03 10:35:33] HITS file was successfully produced:
[2025-12-03 10:35:33] -rw-------. 1 boincer umatlas 908221351 Dec  3 10:33 shared/HITS.pool.root.1
[2025-12-03 10:35:33]  *** Contents of shared directory: ***
[2025-12-03 10:35:33] total 1292336
[2025-12-03 10:35:33] -rw-r--r--. 2 boincer umatlas 409170919 Dec  3 02:37 ATLAS.root_0
[2025-12-03 10:35:33] -rw-r--r--. 2 boincer umatlas     15847 Dec  3 02:37 start_atlas.sh
[2025-12-03 10:35:33] -rw-r--r--. 2 boincer umatlas    590107 Dec  3 02:37 input.tar.gz
[2025-12-03 10:35:33] -rw-------. 1 boincer umatlas 908221351 Dec  3 10:33 HITS.pool.root.1
[2025-12-03 10:35:33] -rw-------. 1 boincer umatlas   5335040 Dec  3 10:35 result.tar.gz
10:35:55 (3379655): run_atlas exited; CPU time 134426.876605
10:35:55 (3379655): called boinc_finish(0)

</stderr_txt>
]]>

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