Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
03:15:52 (3122157): wrapper (7.7.26015): starting
03:15:52 (3122157): wrapper: running run_atlas (--nthreads 4)
[2025-12-03 03:15:52] Arguments: --nthreads 4
[2025-12-03 03:15:52] Threads: 4
[2025-12-03 03:15:52] Checking for CVMFS
[2025-12-03 03:15:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-03 03:15:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-03 03:15:52] Running cvmfs_config stat atlas.cern.ch
[2025-12-03 03:15:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-03 03:15:52] 2.13.3.0 3932 3815 64944 153588 1 92 3771258 20480001 5006 130560 0 9718517 99.860 1296708 891 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-12-03 03:15:52] CVMFS is ok
[2025-12-03 03:15:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-03 03:15:52] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-03 03:15:52] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-03 03:15:52] Further information can be found at the LHC@home message board.
[2025-12-03 03:15:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-03 03:15:52] Checking for apptainer binary...
[2025-12-03 03:15:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-03 03:15:52] Running /usr/bin/apptainer --version
[2025-12-03 03:15:52] apptainer version 1.4.3
[2025-12-03 03:15:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-03 03:15:52] phantom
[2025-12-03 03:15:52] apptainer works
[2025-12-03 03:15:52] Set ATHENA_PROC_NUMBER=4
[2025-12-03 03:15:52] Set ATHENA_CORE_NUMBER=4
[2025-12-03 03:15:52] Starting ATLAS job with PandaID=6900989019
[2025-12-03 03:15:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 12:34:23]  *** The last 200 lines of the pilot log: ***
[2025-12-03 12:34:23] 2025-12-03 19:33:49,217 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 12:34:23] 2025-12-03 19:33:49,803 | INFO     | time since job start (33467s) is within the limit (172800.0s)
[2025-12-03 12:34:23] 2025-12-03 19:33:51,033 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-03 12:34:23] 2025-12-03 19:33:51,037 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3992.4825625
[2025-12-03 12:34:23] 2025-12-03 19:33:51,041 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6900989019/memory_monitor_summary.json (trf name=prmon)
[2025-12-03 12:34:23] 2025-12-03 19:33:51,042 | INFO     | extracted standard info from prmon json
[2025-12-03 12:34:23] 2025-12-03 19:33:51,042 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 12:34:23] 2025-12-03 19:33:51,042 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 12:34:23] 2025-12-03 19:33:51,048 | INFO     | fitting pss+swap vs Time
[2025-12-03 12:34:23] 2025-12-03 19:33:51,049 | INFO     | sum of square deviations: 51309055050.0
[2025-12-03 12:34:23] 2025-12-03 19:33:51,054 | INFO     | sum of deviations: 235644641875.99982
[2025-12-03 12:34:23] 2025-12-03 19:33:51,054 | INFO     | mean x: 1764773699.0
[2025-12-03 12:34:23] 2025-12-03 19:33:51,054 | INFO     | mean y: 2257819.5446265936
[2025-12-03 12:34:23] 2025-12-03 19:33:51,054 | INFO     | intersect: -8102733899.515272
[2025-12-03 12:34:23] 2025-12-03 19:33:51,055 | INFO     | chi2: 3.5823089646726514
[2025-12-03 12:34:23] 2025-12-03 19:33:51,055 | INFO     | sum of square deviations: 49919894120.0
[2025-12-03 12:34:23] 2025-12-03 19:33:51,060 | INFO     | sum of deviations: 322682078326.4999
[2025-12-03 12:34:23] 2025-12-03 19:33:51,060 | INFO     | mean x: 1764773546.5
[2025-12-03 12:34:23] 2025-12-03 19:33:51,060 | INFO     | mean y: 2267337.137867647
[2025-12-03 12:34:23] 2025-12-03 19:33:51,060 | INFO     | intersect: -11405224721.866684
[2025-12-03 12:34:23] 2025-12-03 19:33:51,061 | INFO     | chi2: 1.6338755870176944
[2025-12-03 12:34:23] 2025-12-03 19:33:51,061 | INFO     | current chi2=1.6338755870176944 (change=54.3904335686747 %)
[2025-12-03 12:34:23] 2025-12-03 19:33:51,061 | INFO     | sum of square deviations: 48556035990.0
[2025-12-03 12:34:23] 2025-12-03 19:33:51,066 | INFO     | sum of deviations: 317579724634.0
[2025-12-03 12:34:23] 2025-12-03 19:33:51,066 | INFO     | mean x: 1764773394.0
[2025-12-03 12:34:23] 2025-12-03 19:33:51,066 | INFO     | mean y: 2266766.6066790354
[2025-12-03 12:34:23] 2025-12-03 19:33:51,066 | INFO     | intersect: -11540196226.528803
[2025-12-03 12:34:23] 2025-12-03 19:33:51,067 | INFO     | chi2: 1.6329741757342622
[2025-12-03 12:34:23] 2025-12-03 19:33:51,067 | INFO     | current chi2=1.6329741757342622 (change=0.05517012987981433 %)
[2025-12-03 12:34:23] 2025-12-03 19:33:51,067 | INFO     | right removable region: 538
[2025-12-03 12:34:23] 2025-12-03 19:33:51,067 | INFO     | sum of square deviations: 49919894120.0
[2025-12-03 12:34:23] 2025-12-03 19:33:51,072 | INFO     | sum of deviations: 148960058034.49994
[2025-12-03 12:34:23] 2025-12-03 19:33:51,072 | INFO     | mean x: 1764773851.5
[2025-12-03 12:34:23] 2025-12-03 19:33:51,072 | INFO     | mean y: 2267300.7408088236
[2025-12-03 12:34:23] 2025-12-03 19:33:51,072 | INFO     | intersect: -5263785842.426555
[2025-12-03 12:34:23] 2025-12-03 19:33:51,073 | INFO     | chi2: 2.0064501398011334
[2025-12-03 12:34:23] 2025-12-03 19:33:51,073 | INFO     | current chi2=2.0064501398011334 (change=43.990031022226994 %)
[2025-12-03 12:34:23] 2025-12-03 19:33:51,073 | INFO     | sum of square deviations: 48556035990.0
[2025-12-03 12:34:23] 2025-12-03 19:33:51,078 | INFO     | sum of deviations: 138298912995.0
[2025-12-03 12:34:23] 2025-12-03 19:33:51,078 | INFO     | mean x: 1764774004.0
[2025-12-03 12:34:23] 2025-12-03 19:33:51,078 | INFO     | mean y: 2268491.513914657
[2025-12-03 12:34:23] 2025-12-03 19:33:51,078 | INFO     | intersect: -5024219389.113297
[2025-12-03 12:34:23] 2025-12-03 19:33:51,079 | INFO     | chi2: 2.0015551860416516
[2025-12-03 12:34:23] 2025-12-03 19:33:51,079 | INFO     | current chi2=2.0015551860416516 (change=0.24396089702816873 %)
[2025-12-03 12:34:23] 2025-12-03 19:33:51,079 | INFO     | left removable region: 20
[2025-12-03 12:34:23] 2025-12-03 19:33:51,079 | INFO     | sum of square deviations: 43098889949.5
[2025-12-03 12:34:23] 2025-12-03 19:33:51,084 | INFO     | sum of deviations: 206722441585.00006
[2025-12-03 12:34:23] 2025-12-03 19:33:51,084 | INFO     | mean x: 1764773973.5
[2025-12-03 12:34:23] 2025-12-03 19:33:51,084 | INFO     | mean y: 2279274.5444015446
[2025-12-03 12:34:23] 2025-12-03 19:33:51,084 | INFO     | intersect: -8462402416.214888
[2025-12-03 12:34:23] 2025-12-03 19:33:51,084 | INFO     | chi2: 0.034285519033448106
[2025-12-03 12:34:23] 2025-12-03 19:33:51,085 | INFO     | current memory leak: 4.80 B/s (using 518 data points, chi2=0.03)
[2025-12-03 12:34:23] 2025-12-03 19:33:51,085 | INFO     | could have reported an average CPU frequency of 3978 MHz (22 samples)
[2025-12-03 12:34:23] 2025-12-03 19:33:51,085 | INFO     | ..............................
[2025-12-03 12:34:23] 2025-12-03 19:33:51,085 | INFO     | . Timing measurements:
[2025-12-03 12:34:23] 2025-12-03 19:33:51,085 | INFO     | . get job = 0 s
[2025-12-03 12:34:23] 2025-12-03 19:33:51,085 | INFO     | . initial setup = 3 s
[2025-12-03 12:34:23] 2025-12-03 19:33:51,085 | INFO     | . payload setup = 4 s
[2025-12-03 12:34:23] 2025-12-03 19:33:51,086 | INFO     | . stage-in = 0 s
[2025-12-03 12:34:23] 2025-12-03 19:33:51,086 | INFO     | . payload execution = 33437 s
[2025-12-03 12:34:23] 2025-12-03 19:33:51,086 | INFO     | . stage-out = 2 s
[2025-12-03 12:34:23] 2025-12-03 19:33:51,086 | INFO     | . log creation = 0 s
[2025-12-03 12:34:23] 2025-12-03 19:33:51,086 | INFO     | ..............................
[2025-12-03 12:34:23] 2025-12-03 19:33:51,149 | INFO     | 
[2025-12-03 12:34:23] 2025-12-03 19:33:51,150 | INFO     | job summary report
[2025-12-03 12:34:23] 2025-12-03 19:33:51,150 | INFO     | --------------------------------------------------
[2025-12-03 12:34:23] 2025-12-03 19:33:51,150 | INFO     | PanDA job id: 6900989019
[2025-12-03 12:34:23] 2025-12-03 19:33:51,150 | INFO     | task id: 47556185
[2025-12-03 12:34:23] 2025-12-03 19:33:51,150 | INFO     | errors: (none)
[2025-12-03 12:34:23] 2025-12-03 19:33:51,150 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 12:34:23] 2025-12-03 19:33:51,150 | INFO     | pilot state: finished 
[2025-12-03 12:34:23] 2025-12-03 19:33:51,150 | INFO     | transexitcode: 0
[2025-12-03 12:34:23] 2025-12-03 19:33:51,150 | INFO     | exeerrorcode: 0
[2025-12-03 12:34:23] 2025-12-03 19:33:51,150 | INFO     | exeerrordiag: 
[2025-12-03 12:34:23] 2025-12-03 19:33:51,150 | INFO     | exitcode: 0
[2025-12-03 12:34:23] 2025-12-03 19:33:51,150 | INFO     | exitmsg: OK
[2025-12-03 12:34:23] 2025-12-03 19:33:51,150 | INFO     | cpuconsumptiontime: 133115 s
[2025-12-03 12:34:23] 2025-12-03 19:33:51,150 | INFO     | nevents: 1000
[2025-12-03 12:34:23] 2025-12-03 19:33:51,150 | INFO     | neventsw: 0
[2025-12-03 12:34:23] 2025-12-03 19:33:51,150 | INFO     | pid: 3134778
[2025-12-03 12:34:23] 2025-12-03 19:33:51,150 | INFO     | pgrp: 3134778
[2025-12-03 12:34:23] 2025-12-03 19:33:51,151 | INFO     | corecount: 4
[2025-12-03 12:34:23] 2025-12-03 19:33:51,151 | INFO     | event service: False
[2025-12-03 12:34:23] 2025-12-03 19:33:51,151 | INFO     | sizes: {0: 2284323, 3: 2284585, 11: 2284613, 33444: 2325424, 33447: 2334432, 33449: 2334488, 33454: 2334890}
[2025-12-03 12:34:23] 2025-12-03 19:33:51,151 | INFO     | --------------------------------------------------
[2025-12-03 12:34:23] 2025-12-03 19:33:51,151 | INFO     | 
[2025-12-03 12:34:23] 2025-12-03 19:33:51,151 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2025-12-03 12:34:23] 2025-12-03 19:33:51,166 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 12:34:23] 2025-12-03 19:33:51,167 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 12:34:23] 2025-12-03 19:33:51,167 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 12:34:23] 2025-12-03 19:33:51,167 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 12:34:23] 2025-12-03 19:33:51,167 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 12:34:23] 2025-12-03 19:33:51,167 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 12:34:23] 2025-12-03 19:33:51,167 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 12:34:23] 2025-12-03 19:33:51,167 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 12:34:23] 2025-12-03 19:33:51,167 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 12:34:23] 2025-12-03 19:33:51,167 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 12:34:23] 2025-12-03 19:33:51,167 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 12:34:23] 2025-12-03 19:33:51,167 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 12:34:23] 2025-12-03 19:33:51,167 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 12:34:23] 2025-12-03 19:33:51,167 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 12:34:23] 2025-12-03 19:33:51,167 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 12:34:23] 2025-12-03 19:33:51,167 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 12:34:23] 2025-12-03 19:33:51,168 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 12:34:23] 2025-12-03 19:33:51,168 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 12:34:23] 2025-12-03 19:33:51,168 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 12:34:23] 2025-12-03 19:33:51,168 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 12:34:23] 2025-12-03 19:33:51,168 | INFO     | job 6900989019 has completed (purged errors)
[2025-12-03 12:34:23] 2025-12-03 19:33:51,168 | INFO     | overall cleanup function is called
[2025-12-03 12:34:23] 2025-12-03 19:33:52,180 | INFO     | --- collectZombieJob: --- 10, [3134778]
[2025-12-03 12:34:23] 2025-12-03 19:33:52,180 | INFO     | zombie collector waiting for pid 3134778
[2025-12-03 12:34:23] 2025-12-03 19:33:52,180 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 12:34:23] 2025-12-03 19:33:52,180 | INFO     | collected zombie processes
[2025-12-03 12:34:23] 2025-12-03 19:33:52,180 | INFO     | will attempt to kill all subprocesses of pid=3134778
[2025-12-03 12:34:23] 2025-12-03 19:33:52,321 | INFO     | process IDs to be killed: [3134778] (in reverse order)
[2025-12-03 12:34:23] 2025-12-03 19:33:52,372 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 12:34:23] 2025-12-03 19:33:52,372 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 12:34:23] 2025-12-03 19:33:52,376 | INFO     | did not find any defunct processes belonging to 3134778
[2025-12-03 12:34:23] 2025-12-03 19:33:52,380 | INFO     | did not find any defunct processes belonging to 3134778
[2025-12-03 12:34:23] 2025-12-03 19:33:52,381 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 12:34:23] 2025-12-03 19:33:52,381 | INFO     | ready for new job
[2025-12-03 12:34:23] 2025-12-03 19:33:52,381 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 12:34:23] 2025-12-03 19:33:52,384 | INFO     | ***************************************
[2025-12-03 12:34:23] 2025-12-03 19:33:52,384 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 12:34:23] 2025-12-03 19:33:52,384 | INFO     | ***************************************
[2025-12-03 12:34:23] 2025-12-03 19:33:52,384 | INFO     | 
[2025-12-03 12:34:23] 2025-12-03 19:33:52,385 | INFO     | architecture information:
[2025-12-03 12:34:23] 2025-12-03 19:33:52,386 | INFO     | executing command: cat /etc/os-release
[2025-12-03 12:34:23] 2025-12-03 19:33:52,397 | INFO     | cat /etc/os-release:
[2025-12-03 12:34:23] NAME="CentOS Linux"
[2025-12-03 12:34:23] VERSION="7 (Core)"
[2025-12-03 12:34:23] ID="centos"
[2025-12-03 12:34:23] ID_LIKE="rhel fedora"
[2025-12-03 12:34:23] VERSION_ID="7"
[2025-12-03 12:34:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 12:34:23] ANSI_COLOR="0;31"
[2025-12-03 12:34:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 12:34:23] HOME_URL="https://www.centos.org/"
[2025-12-03 12:34:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 12:34:23] 
[2025-12-03 12:34:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 12:34:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 12:34:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 12:34:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 12:34:23] 
[2025-12-03 12:34:23] 2025-12-03 19:33:52,397 | INFO     | ***************************************
[2025-12-03 12:34:23] 2025-12-03 19:33:52,900 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2025-12-03 12:34:23] 2025-12-03 19:33:52,913 | INFO     | sufficient remaining disk space (414851268608 B)
[2025-12-03 12:34:23] 2025-12-03 19:33:52,913 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 12:34:23] 2025-12-03 19:33:52,913 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 12:34:23] 2025-12-03 19:33:52,913 | INFO     | update_server=False
[2025-12-03 12:34:23] 2025-12-03 19:33:52,914 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 12:34:23] 2025-12-03 19:33:52,914 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 12:34:23] 2025-12-03 19:33:52,914 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 12:34:23] 2025-12-03 19:33:52,914 | INFO     | aborting loop
[2025-12-03 12:34:23] 2025-12-03 19:33:52,914 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 12:34:23] 2025-12-03 19:33:52,914 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 12:34:23] 2025-12-03 19:33:53,394 | INFO     | all payload control threads have been joined
[2025-12-03 12:34:23] 2025-12-03 19:33:53,601 | INFO     | all data control threads have been joined
[2025-12-03 12:34:23] 2025-12-03 19:33:53,650 | INFO     | all job control threads have been joined
[2025-12-03 12:34:23] 2025-12-03 19:33:53,914 | INFO     | [job] retrieve thread has finished
[2025-12-03 12:34:23] 2025-12-03 19:33:53,918 | INFO     | [job] job monitor thread has finished
[2025-12-03 12:34:23] 2025-12-03 19:33:53,918 | INFO     | [job] queue monitor thread has finished
[2025-12-03 12:34:23] 2025-12-03 19:33:54,254 | INFO     | [payload] failed_post thread has finished
[2025-12-03 12:34:23] 2025-12-03 19:33:54,356 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 12:34:23] 2025-12-03 19:33:54,399 | INFO     | [payload] control thread has finished
[2025-12-03 12:34:23] 2025-12-03 19:33:54,411 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 12:34:23] 2025-12-03 19:33:54,603 | INFO     | [data] control thread has finished
[2025-12-03 12:34:23] 2025-12-03 19:33:54,656 | INFO     | [job] control thread has finished
[2025-12-03 12:34:23] 2025-12-03 19:33:54,731 | INFO     | [job] validate thread has finished
[2025-12-03 12:34:23] 2025-12-03 19:33:54,800 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 12:34:23] 2025-12-03 19:33:54,920 | INFO     | [data] copytool_out thread has finished
[2025-12-03 12:34:23] 2025-12-03 19:33:54,927 | INFO     | [data] copytool_in thread has finished
[2025-12-03 12:34:23] 2025-12-03 19:33:55,231 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 12:34:23] 2025-12-03 19:33:55,278 | INFO     | [payload] validate_post thread has finished
[2025-12-03 12:34:23] 2025-12-03 19:33:55,988 | INFO     | [monitor] cgroup control has ended
[2025-12-03 12:34:23] 2025-12-03 19:33:56,919 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 12:34:23] 2025-12-03 19:33:58,338 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127148033730368)>', '<ExcThread(monitor, started 127147752523520)>']
[2025-12-03 12:34:23] 2025-12-03 19:34:03,363 | INFO     | all workflow threads have been joined
[2025-12-03 12:34:23] 2025-12-03 19:34:03,363 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 12:34:23] 2025-12-03 19:34:03,363 | INFO     | traces error code: 0
[2025-12-03 12:34:23] 2025-12-03 19:34:03,363 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 12:34:23] 2025-12-03 19:34:23,008 | INFO     | PID=3126015 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-03 12:34:23] 2025-12-03 19:34:23,008 | INFO     | .. there are 7 such processes running
[2025-12-03 12:34:23] 2025-12-03 19:34:23,008 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 12:34:23] 2025-12-03 19:34:23,008 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 12:34:23] 2025-12-03 19:34:23,008 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 12:34:23] 2025-12-03 19:34:23,009 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 12:34:23] 2025-12-03 19:34:23,009 | CRITICAL | thread 'MainThread' is not alive
[2025-12-03 12:34:23] 2025-12-03 19:34:23,009 | INFO     | [monitor] control thread has ended
[2025-12-03 12:34:23] 2025-12-03 19:34:23,073 [wrapper] ==== pilot stdout END ====
[2025-12-03 12:34:23] 2025-12-03 19:34:23,075 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 12:34:23] 2025-12-03 19:34:23,077 [wrapper] pilotpid: 3126015
[2025-12-03 12:34:23] 2025-12-03 19:34:23,079 [wrapper] Pilot exit status: 0
[2025-12-03 12:34:23] 2025-12-03 19:34:23,086 [wrapper] pandaids: 6900989019
[2025-12-03 12:34:23] 2025-12-03 19:34:23,119 [wrapper] cleanup supervisor_pilot 3544237 3126016
[2025-12-03 12:34:23] 2025-12-03 19:34:23,121 [wrapper] Test setup, not cleaning
[2025-12-03 12:34:23] 2025-12-03 19:34:23,123 [wrapper] apfmon messages muted
[2025-12-03 12:34:23] 2025-12-03 19:34:23,125 [wrapper] ==== wrapper stdout END ====
[2025-12-03 12:34:23] 2025-12-03 19:34:23,127 [wrapper] ==== wrapper stderr END ====
[2025-12-03 12:34:23]  *** Error codes and diagnostics ***
[2025-12-03 12:34:23]     "exeErrorCode": 0,
[2025-12-03 12:34:23]     "exeErrorDiag": "",
[2025-12-03 12:34:23]     "pilotErrorCode": 0,
[2025-12-03 12:34:23]     "pilotErrorDiag": "",
[2025-12-03 12:34:23]  *** Listing of results directory ***
[2025-12-03 12:34:23] total 1304132
[2025-12-03 12:34:23] -rw-r--r-- 1 boinc boinc    576529 Nov 27 17:58 pilot3.tar.gz
[2025-12-03 12:34:23] -rwx------ 1 boinc boinc     36292 Nov 27 18:00 runpilot2-wrapper.sh
[2025-12-03 12:34:23] -rw-r--r-- 1 boinc boinc      5112 Nov 27 18:04 queuedata.json
[2025-12-03 12:34:23] -rw-r--r-- 1 boinc boinc       100 Dec  3 03:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 12:34:23] -rwxr-xr-x 1 boinc boinc      7986 Dec  3 03:15 run_atlas
[2025-12-03 12:34:23] -rw-r--r-- 1 boinc boinc       105 Dec  3 03:15 job.xml
[2025-12-03 12:34:23] -rw-r--r-- 1 boinc boinc      9721 Dec  3 03:15 init_data.xml
[2025-12-03 12:34:23] -rw-r--r-- 2 boinc boinc 410404000 Dec  3 03:15 EVNT.47483658._004525.pool.root.1
[2025-12-03 12:34:23] -rw-r--r-- 2 boinc boinc     15847 Dec  3 03:15 start_atlas.sh
[2025-12-03 12:34:23] drwxrwx--x 2 boinc boinc      4096 Dec  3 03:15 shared
[2025-12-03 12:34:23] -rw-r--r-- 2 boinc boinc    590105 Dec  3 03:15 input.tar.gz
[2025-12-03 12:34:23] -rw-r--r-- 1 boinc boinc         0 Dec  3 03:15 boinc_lockfile
[2025-12-03 12:34:23] -rw-r--r-- 1 boinc boinc      2787 Dec  3 03:15 pandaJob.out
[2025-12-03 12:34:23] -rw------- 1 boinc boinc    985783 Dec  3 03:15 agis_schedconf.cvmfs.json
[2025-12-03 12:34:23] drwx------ 5 boinc boinc      4096 Dec  3 03:16 pilot3
[2025-12-03 12:34:23] -rw-r--r-- 1 boinc boinc       533 Dec  3 12:30 boinc_task_state.xml
[2025-12-03 12:34:23] -rw------- 1 boinc boinc 908781602 Dec  3 12:33 HITS.47556185._002882.pool.root.1
[2025-12-03 12:34:23] -rw------- 1 boinc boinc        95 Dec  3 12:33 pilot_heartbeat.json
[2025-12-03 12:34:23] -rw------- 1 boinc boinc      1032 Dec  3 12:33 memory_monitor_summary.json
[2025-12-03 12:34:23] -rw------- 1 boinc boinc   1516240 Dec  3 12:33 agis_ddmendpoints.agis.ALL.json
[2025-12-03 12:34:23] -rw------- 1 boinc boinc   1365488 Dec  3 12:33 log.47556185._002882.job.log.tgz.1
[2025-12-03 12:34:23] -rw------- 1 boinc boinc      8555 Dec  3 12:33 heartbeat.json
[2025-12-03 12:34:23] -rw-r--r-- 1 boinc boinc        29 Dec  3 12:34 wrapper_checkpoint.txt
[2025-12-03 12:34:23] -rw-r--r-- 1 boinc boinc      8192 Dec  3 12:34 boinc_mmap_file
[2025-12-03 12:34:23] -rw------- 1 boinc boinc       892 Dec  3 12:34 pilotlog.txt
[2025-12-03 12:34:23] -rw------- 1 boinc boinc   4804730 Dec  3 12:34 log.47556185._002882.job.log.1
[2025-12-03 12:34:23] -rw------- 1 boinc boinc       353 Dec  3 12:34 output.list
[2025-12-03 12:34:23] -rw-r--r-- 1 boinc boinc       620 Dec  3 12:34 runtime_log
[2025-12-03 12:34:23] -rw------- 1 boinc boinc   6184960 Dec  3 12:34 result.tar.gz
[2025-12-03 12:34:23] -rw-r--r-- 1 boinc boinc      8920 Dec  3 12:34 runtime_log.err
[2025-12-03 12:34:23] -rw------- 1 boinc boinc       662 Dec  3 12:34 iWKNDmA21i8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmp4KKDmyx3aRm.diag
[2025-12-03 12:34:23] -rw-r--r-- 1 boinc boinc     21311 Dec  3 12:34 stderr.txt
[2025-12-03 12:34:23] HITS file was successfully produced:
[2025-12-03 12:34:23] -rw------- 1 boinc boinc 908781602 Dec  3 12:33 shared/HITS.pool.root.1
[2025-12-03 12:34:23]  *** Contents of shared directory: ***
[2025-12-03 12:34:23] total 1294912
[2025-12-03 12:34:23] -rw-r--r-- 2 boinc boinc 410404000 Dec  3 03:15 ATLAS.root_0
[2025-12-03 12:34:23] -rw-r--r-- 2 boinc boinc     15847 Dec  3 03:15 start_atlas.sh
[2025-12-03 12:34:23] -rw-r--r-- 2 boinc boinc    590105 Dec  3 03:15 input.tar.gz
[2025-12-03 12:34:23] -rw------- 1 boinc boinc 908781602 Dec  3 12:33 HITS.pool.root.1
[2025-12-03 12:34:23] -rw------- 1 boinc boinc   6184960 Dec  3 12:34 result.tar.gz
12:34:24 (3122157): run_atlas exited; CPU time 133287.371706
12:34:24 (3122157): called boinc_finish(0)

</stderr_txt>
]]>

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