Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:30:12 (1489960): wrapper (7.7.26015): starting
01:30:12 (1489960): wrapper: running run_atlas (--nthreads 8)
[2025-12-03 01:30:12] Arguments: --nthreads 8
[2025-12-03 01:30:12] Threads: 8
[2025-12-03 01:30:12] Checking for CVMFS
[2025-12-03 01:30:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-03 01:30:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-03 01:30:13] Running cvmfs_config stat atlas.cern.ch
[2025-12-03 01:30:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-03 01:30:14] 2.13.3.0 7100 39709 165008 153583 1 267 40191819 40960000 38099 16776704 0 533234572 99.700 380738630 47871 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-03 01:30:14] CVMFS is ok
[2025-12-03 01:30:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-03 01:30:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-03 01:30:14] Further information can be found at the LHC@home message board.
[2025-12-03 01:30:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-03 01:30:14] Checking for apptainer binary...
[2025-12-03 01:30:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-03 01:30:14] Running /usr/bin/apptainer --version
[2025-12-03 01:30:14] apptainer version 1.4.4-1.el9
[2025-12-03 01:30:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-03 01:30:15] c8-6-10.aglt2.org
[2025-12-03 01:30:15] apptainer works
[2025-12-03 01:30:15] Set ATHENA_PROC_NUMBER=8
[2025-12-03 01:30:15] Set ATHENA_CORE_NUMBER=8
[2025-12-03 01:30:15] Starting ATLAS job with PandaID=6899133891
[2025-12-03 01:30:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 07:46:11]  *** The last 200 lines of the pilot log: ***
[2025-12-03 07:46:11] 2025-12-03 12:45:28,913 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 07:46:11] 2025-12-03 12:45:28,916 | INFO     | fitting pss+swap vs Time
[2025-12-03 07:46:11] 2025-12-03 12:45:28,917 | INFO     | sum of square deviations: 15077814466.202684
[2025-12-03 07:46:11] 2025-12-03 12:45:28,919 | INFO     | sum of deviations: 466999819869.58887
[2025-12-03 07:46:11] 2025-12-03 12:45:28,919 | INFO     | mean x: 1764754757.8739727
[2025-12-03 07:46:11] 2025-12-03 12:45:28,919 | INFO     | mean y: 3290374.904109589
[2025-12-03 07:46:11] 2025-12-03 12:45:28,919 | INFO     | intersect: -54655835182.61465
[2025-12-03 07:46:11] 2025-12-03 12:45:28,919 | INFO     | chi2: 14.283740149537214
[2025-12-03 07:46:11] 2025-12-03 12:45:28,919 | INFO     | sum of square deviations: 14466700297.330622
[2025-12-03 07:46:11] 2025-12-03 12:45:28,921 | INFO     | sum of deviations: 602541870533.6497
[2025-12-03 07:46:11] 2025-12-03 12:45:28,921 | INFO     | mean x: 1764754605.386111
[2025-12-03 07:46:11] 2025-12-03 12:45:28,921 | INFO     | mean y: 3324167.65
[2025-12-03 07:46:11] 2025-12-03 12:45:28,921 | INFO     | intersect: -73499169082.8963
[2025-12-03 07:46:11] 2025-12-03 12:45:28,921 | INFO     | chi2: 11.333466883987391
[2025-12-03 07:46:11] 2025-12-03 12:45:28,922 | INFO     | current chi2=11.333466883987391 (change=20.654767131460385 %)
[2025-12-03 07:46:11] 2025-12-03 12:45:28,922 | INFO     | right removable region: 359
[2025-12-03 07:46:11] 2025-12-03 12:45:28,922 | INFO     | sum of square deviations: 14466505707.33063
[2025-12-03 07:46:11] 2025-12-03 12:45:28,924 | INFO     | sum of deviations: 288472875045.186
[2025-12-03 07:46:11] 2025-12-03 12:45:28,924 | INFO     | mean x: 1764754910.386111
[2025-12-03 07:46:11] 2025-12-03 12:45:28,924 | INFO     | mean y: 3334907.797222222
[2025-12-03 07:46:11] 2025-12-03 12:45:28,924 | INFO     | intersect: -35187189538.69868
[2025-12-03 07:46:11] 2025-12-03 12:45:28,924 | INFO     | chi2: 9.018365452979623
[2025-12-03 07:46:11] 2025-12-03 12:45:28,924 | INFO     | current chi2=9.018365452979623 (change=36.86271691751678 %)
[2025-12-03 07:46:11] 2025-12-03 12:45:28,924 | INFO     | sum of square deviations: 13871941448.349262
[2025-12-03 07:46:11] 2025-12-03 12:45:28,926 | INFO     | sum of deviations: 129527777088.18024
[2025-12-03 07:46:11] 2025-12-03 12:45:28,926 | INFO     | mean x: 1764755062.8985915
[2025-12-03 07:46:11] 2025-12-03 12:45:28,926 | INFO     | mean y: 3375665.5605633804
[2025-12-03 07:46:11] 2025-12-03 12:45:28,926 | INFO     | intersect: -16474836937.446598
[2025-12-03 07:46:11] 2025-12-03 12:45:28,926 | INFO     | chi2: 5.161241975206117
[2025-12-03 07:46:11] 2025-12-03 12:45:28,927 | INFO     | current chi2=5.161241975206117 (change=42.76965152813952 %)
[2025-12-03 07:46:11] 2025-12-03 12:45:28,927 | INFO     | sum of square deviations: 13293889126.754303
[2025-12-03 07:46:11] 2025-12-03 12:45:28,928 | INFO     | sum of deviations: 43236534479.01153
[2025-12-03 07:46:11] 2025-12-03 12:45:28,929 | INFO     | mean x: 1764755215.4114287
[2025-12-03 07:46:11] 2025-12-03 12:45:28,929 | INFO     | mean y: 3398326.597142857
[2025-12-03 07:46:11] 2025-12-03 12:45:28,929 | INFO     | intersect: -5736223765.224886
[2025-12-03 07:46:11] 2025-12-03 12:45:28,929 | INFO     | chi2: 3.6819675382707007
[2025-12-03 07:46:11] 2025-12-03 12:45:28,929 | INFO     | current chi2=3.6819675382707007 (change=28.661210693891963 %)
[2025-12-03 07:46:11] 2025-12-03 12:45:28,929 | INFO     | sum of square deviations: 12732158515.727531
[2025-12-03 07:46:11] 2025-12-03 12:45:28,931 | INFO     | sum of deviations: 30276264795.58557
[2025-12-03 07:46:11] 2025-12-03 12:45:28,931 | INFO     | mean x: 1764755367.9188406
[2025-12-03 07:46:11] 2025-12-03 12:45:28,931 | INFO     | mean y: 3401837.663768116
[2025-12-03 07:46:11] 2025-12-03 12:45:28,931 | INFO     | intersect: -4193074412.026467
[2025-12-03 07:46:11] 2025-12-03 12:45:28,931 | INFO     | chi2: 3.6717187529411386
[2025-12-03 07:46:11] 2025-12-03 12:45:28,931 | INFO     | current chi2=3.6717187529411386 (change=0.27835077911565725 %)
[2025-12-03 07:46:11] 2025-12-03 12:45:28,931 | INFO     | left removable region: 40
[2025-12-03 07:46:11] 2025-12-03 12:45:28,931 | INFO     | sum of square deviations: 10064950707.86832
[2025-12-03 07:46:11] 2025-12-03 12:45:28,933 | INFO     | sum of deviations: 143905820326.61447
[2025-12-03 07:46:11] 2025-12-03 12:45:28,933 | INFO     | mean x: 1764755794.940439
[2025-12-03 07:46:11] 2025-12-03 12:45:28,933 | INFO     | mean y: 3453423.6112852665
[2025-12-03 07:46:11] 2025-12-03 12:45:28,933 | INFO     | intersect: -25228526117.87988
[2025-12-03 07:46:11] 2025-12-03 12:45:28,933 | INFO     | chi2: 0.27308581042835123
[2025-12-03 07:46:11] 2025-12-03 12:45:28,933 | INFO     | current memory leak: 14.30 B/s (using 319 data points, chi2=0.27)
[2025-12-03 07:46:11] 2025-12-03 12:45:28,934 | INFO     | could have reported an average CPU frequency of 3792 MHz (16 samples)
[2025-12-03 07:46:11] 2025-12-03 12:45:28,934 | INFO     | ..............................
[2025-12-03 07:46:11] 2025-12-03 12:45:28,934 | INFO     | . Timing measurements:
[2025-12-03 07:46:11] 2025-12-03 12:45:28,934 | INFO     | . get job = 0 s
[2025-12-03 07:46:11] 2025-12-03 12:45:28,934 | INFO     | . initial setup = 6 s
[2025-12-03 07:46:11] 2025-12-03 12:45:28,934 | INFO     | . payload setup = 81 s
[2025-12-03 07:46:11] 2025-12-03 12:45:28,934 | INFO     | . stage-in = 0 s
[2025-12-03 07:46:11] 2025-12-03 12:45:28,934 | INFO     | . payload execution = 22273 s
[2025-12-03 07:46:11] 2025-12-03 12:45:28,934 | INFO     | . stage-out = 3 s
[2025-12-03 07:46:11] 2025-12-03 12:45:28,934 | INFO     | . log creation = 0 s
[2025-12-03 07:46:11] 2025-12-03 12:45:28,934 | INFO     | ..............................
[2025-12-03 07:46:11] 2025-12-03 12:45:29,014 | INFO     | time since job start (22446s) is within the limit (172800.0s)
[2025-12-03 07:46:11] 2025-12-03 12:45:29,015 | INFO     | 
[2025-12-03 07:46:11] 2025-12-03 12:45:29,015 | INFO     | job summary report
[2025-12-03 07:46:11] 2025-12-03 12:45:29,015 | INFO     | --------------------------------------------------
[2025-12-03 07:46:11] 2025-12-03 12:45:29,015 | INFO     | PanDA job id: 6899133891
[2025-12-03 07:46:11] 2025-12-03 12:45:29,015 | INFO     | task id: 47531058
[2025-12-03 07:46:11] 2025-12-03 12:45:29,015 | INFO     | errors: (none)
[2025-12-03 07:46:11] 2025-12-03 12:45:29,015 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 07:46:11] 2025-12-03 12:45:29,015 | INFO     | pilot state: finished 
[2025-12-03 07:46:11] 2025-12-03 12:45:29,015 | INFO     | transexitcode: 0
[2025-12-03 07:46:11] 2025-12-03 12:45:29,015 | INFO     | exeerrorcode: 0
[2025-12-03 07:46:11] 2025-12-03 12:45:29,015 | INFO     | exeerrordiag: 
[2025-12-03 07:46:11] 2025-12-03 12:45:29,015 | INFO     | exitcode: 0
[2025-12-03 07:46:11] 2025-12-03 12:45:29,015 | INFO     | exitmsg: OK
[2025-12-03 07:46:11] 2025-12-03 12:45:29,015 | INFO     | cpuconsumptiontime: 120121 s
[2025-12-03 07:46:11] 2025-12-03 12:45:29,015 | INFO     | nevents: 1000
[2025-12-03 07:46:11] 2025-12-03 12:45:29,015 | INFO     | neventsw: 0
[2025-12-03 07:46:11] 2025-12-03 12:45:29,015 | INFO     | pid: 1522786
[2025-12-03 07:46:11] 2025-12-03 12:45:29,015 | INFO     | pgrp: 1522786
[2025-12-03 07:46:11] 2025-12-03 12:45:29,015 | INFO     | corecount: 8
[2025-12-03 07:46:11] 2025-12-03 12:45:29,015 | INFO     | event service: False
[2025-12-03 07:46:11] 2025-12-03 12:45:29,015 | INFO     | sizes: {0: 2284227, 1: 2284482, 12: 2284482, 23: 2284510, 30: 2284800, 34: 2284828, 22358: 2339285, 22359: 2339284, 22362: 2348334, 22364: 2348390, 22381: 2348636}
[2025-12-03 07:46:11] 2025-12-03 12:45:29,015 | INFO     | --------------------------------------------------
[2025-12-03 07:46:11] 2025-12-03 12:45:29,015 | INFO     | 
[2025-12-03 07:46:11] 2025-12-03 12:45:29,016 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-03 07:46:11] 2025-12-03 12:45:29,133 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 07:46:11] 2025-12-03 12:45:29,133 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 07:46:11] 2025-12-03 12:45:29,133 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 07:46:11] 2025-12-03 12:45:29,133 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 07:46:11] 2025-12-03 12:45:29,133 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 07:46:11] 2025-12-03 12:45:29,134 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 07:46:11] 2025-12-03 12:45:29,134 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 07:46:11] 2025-12-03 12:45:29,134 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 07:46:11] 2025-12-03 12:45:29,134 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 07:46:11] 2025-12-03 12:45:29,134 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 07:46:11] 2025-12-03 12:45:29,134 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 07:46:11] 2025-12-03 12:45:29,134 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 07:46:11] 2025-12-03 12:45:29,134 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 07:46:11] 2025-12-03 12:45:29,134 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 07:46:11] 2025-12-03 12:45:29,134 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 07:46:11] 2025-12-03 12:45:29,134 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 07:46:11] 2025-12-03 12:45:29,134 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 07:46:11] 2025-12-03 12:45:29,134 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 07:46:11] 2025-12-03 12:45:29,134 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 07:46:11] 2025-12-03 12:45:29,134 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 07:46:11] 2025-12-03 12:45:29,134 | INFO     | job 6899133891 has completed (purged errors)
[2025-12-03 07:46:11] 2025-12-03 12:45:29,134 | INFO     | overall cleanup function is called
[2025-12-03 07:46:11] 2025-12-03 12:45:30,164 | INFO     | --- collectZombieJob: --- 10, [1522786]
[2025-12-03 07:46:11] 2025-12-03 12:45:30,164 | INFO     | zombie collector waiting for pid 1522786
[2025-12-03 07:46:11] 2025-12-03 12:45:30,164 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 07:46:11] 2025-12-03 12:45:30,164 | INFO     | collected zombie processes
[2025-12-03 07:46:11] 2025-12-03 12:45:30,164 | INFO     | will attempt to kill all subprocesses of pid=1522786
[2025-12-03 07:46:11] 2025-12-03 12:45:30,639 | INFO     | process IDs to be killed: [1522786] (in reverse order)
[2025-12-03 07:46:11] 2025-12-03 12:45:30,827 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 07:46:11] 2025-12-03 12:45:30,831 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 07:46:11] 2025-12-03 12:45:30,864 | INFO     | did not find any defunct processes belonging to 1522786
[2025-12-03 07:46:11] 2025-12-03 12:45:30,897 | INFO     | did not find any defunct processes belonging to 1522786
[2025-12-03 07:46:11] 2025-12-03 12:45:30,898 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 07:46:11] 2025-12-03 12:45:30,899 | INFO     | ready for new job
[2025-12-03 07:46:11] 2025-12-03 12:45:30,899 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 07:46:11] 2025-12-03 12:45:30,901 | INFO     | ***************************************
[2025-12-03 07:46:11] 2025-12-03 12:45:30,901 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 07:46:11] 2025-12-03 12:45:30,901 | INFO     | ***************************************
[2025-12-03 07:46:11] 2025-12-03 12:45:30,901 | INFO     | 
[2025-12-03 07:46:11] 2025-12-03 12:45:30,906 | INFO     | architecture information:
[2025-12-03 07:46:11] 2025-12-03 12:45:30,906 | INFO     | executing command: cat /etc/os-release
[2025-12-03 07:46:11] 2025-12-03 12:45:30,921 | INFO     | cat /etc/os-release:
[2025-12-03 07:46:11] NAME="CentOS Linux"
[2025-12-03 07:46:11] VERSION="7 (Core)"
[2025-12-03 07:46:11] ID="centos"
[2025-12-03 07:46:11] ID_LIKE="rhel fedora"
[2025-12-03 07:46:11] VERSION_ID="7"
[2025-12-03 07:46:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 07:46:11] ANSI_COLOR="0;31"
[2025-12-03 07:46:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 07:46:11] HOME_URL="https://www.centos.org/"
[2025-12-03 07:46:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 07:46:11] 
[2025-12-03 07:46:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 07:46:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 07:46:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 07:46:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 07:46:11] 
[2025-12-03 07:46:11] 2025-12-03 12:45:30,921 | INFO     | ***************************************
[2025-12-03 07:46:11] 2025-12-03 12:45:31,439 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-03 07:46:11] 2025-12-03 12:45:31,476 | INFO     | sufficient remaining disk space (168877359104 B)
[2025-12-03 07:46:11] 2025-12-03 12:45:31,477 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 07:46:11] 2025-12-03 12:45:31,477 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 07:46:11] 2025-12-03 12:45:31,477 | INFO     | update_server=False
[2025-12-03 07:46:11] 2025-12-03 12:45:31,477 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 07:46:11] 2025-12-03 12:45:31,477 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 07:46:11] 2025-12-03 12:45:31,477 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 07:46:11] 2025-12-03 12:45:31,477 | INFO     | aborting loop
[2025-12-03 07:46:11] 2025-12-03 12:45:31,675 | INFO     | all data control threads have been joined
[2025-12-03 07:46:11] 2025-12-03 12:45:31,763 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 07:46:11] 2025-12-03 12:45:31,941 | INFO     | all payload control threads have been joined
[2025-12-03 07:46:11] 2025-12-03 12:45:32,477 | INFO     | all job control threads have been joined
[2025-12-03 07:46:11] 2025-12-03 12:45:32,484 | INFO     | [job] retrieve thread has finished
[2025-12-03 07:46:11] 2025-12-03 12:45:32,484 | INFO     | [job] job monitor thread has finished
[2025-12-03 07:46:11] 2025-12-03 12:45:32,680 | INFO     | [data] control thread has finished
[2025-12-03 07:46:11] 2025-12-03 12:45:32,887 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 07:46:11] 2025-12-03 12:45:32,947 | INFO     | [payload] control thread has finished
[2025-12-03 07:46:11] 2025-12-03 12:45:32,953 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 07:46:11] 2025-12-03 12:45:33,020 | INFO     | [job] validate thread has finished
[2025-12-03 07:46:11] 2025-12-03 12:45:33,022 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 07:46:11] 2025-12-03 12:45:33,126 | INFO     | [data] copytool_in thread has finished
[2025-12-03 07:46:11] 2025-12-03 12:45:33,189 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 07:46:11] 2025-12-03 12:45:33,287 | INFO     | [payload] validate_post thread has finished
[2025-12-03 07:46:11] 2025-12-03 12:45:33,420 | INFO     | [payload] failed_post thread has finished
[2025-12-03 07:46:11] 2025-12-03 12:45:33,483 | INFO     | [job] control thread has finished
[2025-12-03 07:46:11] 2025-12-03 12:45:33,484 | INFO     | [data] copytool_out thread has finished
[2025-12-03 07:46:11] 2025-12-03 12:45:34,031 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 07:46:11] 2025-12-03 12:45:35,038 | INFO     | [job] queue monitor thread has finished
[2025-12-03 07:46:11] 2025-12-03 12:45:35,772 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 07:46:11] 2025-12-03 12:46:02,548 | INFO     | [monitor] cgroup control has ended
[2025-12-03 07:46:11] 2025-12-03 12:46:02,852 | INFO     | PID=1500634 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-03 07:46:11] 2025-12-03 12:46:02,852 | INFO     | .. there are 34 such processes running
[2025-12-03 07:46:11] 2025-12-03 12:46:02,853 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 07:46:11] 2025-12-03 12:46:02,853 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 07:46:11] 2025-12-03 12:46:02,853 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 07:46:11] 2025-12-03 12:46:04,418 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140338752968512)>', '<ExcThread(monitor, started 140338123503360)>']
[2025-12-03 07:46:11] 2025-12-03 12:46:04,865 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 07:46:11] 2025-12-03 12:46:04,865 | INFO     | [monitor] control thread has ended
[2025-12-03 07:46:11] 2025-12-03 12:46:09,445 | INFO     | all workflow threads have been joined
[2025-12-03 07:46:11] 2025-12-03 12:46:09,445 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 07:46:11] 2025-12-03 12:46:09,445 | INFO     | traces error code: 0
[2025-12-03 07:46:11] 2025-12-03 12:46:09,446 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 07:46:11] 2025-12-03 12:46:10,609 [wrapper] ==== pilot stdout END ====
[2025-12-03 07:46:11] 2025-12-03 12:46:10,624 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 07:46:11] 2025-12-03 12:46:10,630 [wrapper] pilotpid: 1500634
[2025-12-03 07:46:11] 2025-12-03 12:46:10,633 [wrapper] Pilot exit status: 0
[2025-12-03 07:46:11] 2025-12-03 12:46:10,688 [wrapper] pandaids: 6899133891
[2025-12-03 07:46:11] 2025-12-03 12:46:10,833 [wrapper] cleanup supervisor_pilot  993838 1500635
[2025-12-03 07:46:11] 2025-12-03 12:46:10,854 [wrapper] Test setup, not cleaning
[2025-12-03 07:46:11] 2025-12-03 12:46:10,869 [wrapper] apfmon messages muted
[2025-12-03 07:46:11] 2025-12-03 12:46:10,881 [wrapper] ==== wrapper stdout END ====
[2025-12-03 07:46:11] 2025-12-03 12:46:10,904 [wrapper] ==== wrapper stderr END ====
[2025-12-03 07:46:11]  *** Error codes and diagnostics ***
[2025-12-03 07:46:11]     "exeErrorCode": 0,
[2025-12-03 07:46:11]     "exeErrorDiag": "",
[2025-12-03 07:46:11]     "pilotErrorCode": 0,
[2025-12-03 07:46:11]     "pilotErrorDiag": "",
[2025-12-03 07:46:11]  *** Listing of results directory ***
[2025-12-03 07:46:11] total 1060064
[2025-12-03 07:46:11] -rw-r--r--. 1 boincer umatlas    576529 Nov 28 17:41 pilot3.tar.gz
[2025-12-03 07:46:11] -rwx------. 1 boincer umatlas     36292 Nov 28 17:46 runpilot2-wrapper.sh
[2025-12-03 07:46:11] -rw-r--r--. 1 boincer umatlas      5112 Nov 28 17:49 queuedata.json
[2025-12-03 07:46:11] -rw-r--r--. 1 boincer umatlas       100 Dec  3 01:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 07:46:11] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  3 01:30 run_atlas
[2025-12-03 07:46:11] -rw-r--r--. 1 boincer umatlas       105 Dec  3 01:30 job.xml
[2025-12-03 07:46:11] -rw-r--r--. 2 boincer umatlas 377691758 Dec  3 01:30 EVNT.47531050._000507.pool.root.1
[2025-12-03 07:46:11] -rw-r--r--. 2 boincer umatlas     15847 Dec  3 01:30 start_atlas.sh
[2025-12-03 07:46:11] drwxrwx--x. 2 boincer umatlas      4096 Dec  3 01:30 shared
[2025-12-03 07:46:11] -rw-r--r--. 2 boincer umatlas    590124 Dec  3 01:30 input.tar.gz
[2025-12-03 07:46:11] -rw-r--r--. 1 boincer umatlas         0 Dec  3 01:30 boinc_lockfile
[2025-12-03 07:46:11] -rw-r--r--. 1 boincer umatlas      2881 Dec  3 01:30 pandaJob.out
[2025-12-03 07:46:11] -rw-------. 1 boincer umatlas        57 Dec  3 01:30 setup.sh.local
[2025-12-03 07:46:11] -rw-------. 1 boincer umatlas    985787 Dec  3 01:31 agis_schedconf.cvmfs.json
[2025-12-03 07:46:11] drwx------. 5 boincer umatlas      4096 Dec  3 01:31 pilot3
[2025-12-03 07:46:11] -rw-r--r--. 1 boincer umatlas       533 Dec  3 07:35 boinc_task_state.xml
[2025-12-03 07:46:11] -rw-r--r--. 1 boincer umatlas      7173 Dec  3 07:40 init_data.xml
[2025-12-03 07:46:11] -rw-------. 1 boincer umatlas 694325203 Dec  3 07:44 HITS.47531058._001242.pool.root.1
[2025-12-03 07:46:11] -rw-------. 1 boincer umatlas      1072 Dec  3 07:45 memory_monitor_summary.json
[2025-12-03 07:46:11] -rw-------. 1 boincer umatlas   1516240 Dec  3 07:45 agis_ddmendpoints.agis.ALL.json
[2025-12-03 07:46:11] -rw-------. 1 boincer umatlas   1771450 Dec  3 07:45 log.47531058._001242.job.log.tgz.1
[2025-12-03 07:46:11] -rw-------. 1 boincer umatlas     28015 Dec  3 07:45 heartbeat.json
[2025-12-03 07:46:11] -rw-------. 1 boincer umatlas        95 Dec  3 07:46 pilot_heartbeat.json
[2025-12-03 07:46:11] -rw-------. 1 boincer umatlas      4825 Dec  3 07:46 pilotlog.txt
[2025-12-03 07:46:11] -rw-r--r--. 1 boincer umatlas      8192 Dec  3 07:46 boinc_mmap_file
[2025-12-03 07:46:11] -rw-r--r--. 1 boincer umatlas        29 Dec  3 07:46 wrapper_checkpoint.txt
[2025-12-03 07:46:11] -rw-------. 1 boincer umatlas   3000453 Dec  3 07:46 log.47531058._001242.job.log.1
[2025-12-03 07:46:11] -rw-------. 1 boincer umatlas       353 Dec  3 07:46 output.list
[2025-12-03 07:46:11] -rw-r--r--. 1 boincer umatlas       620 Dec  3 07:46 runtime_log
[2025-12-03 07:46:11] -rw-------. 1 boincer umatlas   4812800 Dec  3 07:46 result.tar.gz
[2025-12-03 07:46:11] -rw-r--r--. 1 boincer umatlas      9338 Dec  3 07:46 runtime_log.err
[2025-12-03 07:46:11] -rw-------. 1 boincer umatlas       664 Dec  3 07:46 c6cNDmZPMj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmouOKDmCX7dLo.diag
[2025-12-03 07:46:11] -rw-r--r--. 1 boincer umatlas     21183 Dec  3 07:46 stderr.txt
[2025-12-03 07:46:11] HITS file was successfully produced:
[2025-12-03 07:46:11] -rw-------. 1 boincer umatlas 694325203 Dec  3 07:44 shared/HITS.pool.root.1
[2025-12-03 07:46:11]  *** Contents of shared directory: ***
[2025-12-03 07:46:11] total 1052192
[2025-12-03 07:46:11] -rw-r--r--. 2 boincer umatlas 377691758 Dec  3 01:30 ATLAS.root_0
[2025-12-03 07:46:11] -rw-r--r--. 2 boincer umatlas     15847 Dec  3 01:30 start_atlas.sh
[2025-12-03 07:46:11] -rw-r--r--. 2 boincer umatlas    590124 Dec  3 01:30 input.tar.gz
[2025-12-03 07:46:11] -rw-------. 1 boincer umatlas 694325203 Dec  3 07:44 HITS.pool.root.1
[2025-12-03 07:46:11] -rw-------. 1 boincer umatlas   4812800 Dec  3 07:46 result.tar.gz
07:46:12 (1489960): run_atlas exited; CPU time 120305.216155
07:46:12 (1489960): called boinc_finish(0)

</stderr_txt>
]]>

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