Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:30:44 (4056140): wrapper (7.7.26015): starting
23:30:44 (4056140): wrapper: running run_atlas (--nthreads 8)
[2025-12-02 23:30:44] Arguments: --nthreads 8
[2025-12-02 23:30:44] Threads: 8
[2025-12-02 23:30:44] Checking for CVMFS
[2025-12-02 23:30:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 23:30:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 23:30:45] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 23:30:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 23:30:46] 2.13.3.0 12357 39605 315268 153581 1 393 27123168 32503809 35910 16776704 0 633873786 99.627 567693874 45258 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-02 23:30:46] CVMFS is ok
[2025-12-02 23:30:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 23:30:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 23:30:46] Further information can be found at the LHC@home message board.
[2025-12-02 23:30:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 23:30:46] Checking for apptainer binary...
[2025-12-02 23:30:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 23:30:46] Running /usr/bin/apptainer --version
[2025-12-02 23:30:46] apptainer version 1.4.4-1.el9
[2025-12-02 23:30:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 23:30:46] c8-7-2.aglt2.org
[2025-12-02 23:30:46] apptainer works
[2025-12-02 23:30:46] Set ATHENA_PROC_NUMBER=8
[2025-12-02 23:30:46] Set ATHENA_CORE_NUMBER=8
[2025-12-02 23:30:47] Starting ATLAS job with PandaID=6899576351
[2025-12-02 23:30:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 07:12:08]  *** The last 200 lines of the pilot log: ***
[2025-12-03 07:12:08] 2025-12-03 12:10:50,114 | INFO     | time since job start (27537s) is within the limit (172800.0s)
[2025-12-03 07:12:08] 2025-12-03 12:10:52,121 | INFO     | time since job start (27539s) is within the limit (172800.0s)
[2025-12-03 07:12:08] 2025-12-03 12:10:52,368 | INFO     | monitor loop #1538: job 0:6899576351 is in state 'finished'
[2025-12-03 07:12:08] 2025-12-03 12:10:52,370 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 07:12:08] 2025-12-03 12:10:54,145 | INFO     | time since job start (27541s) is within the limit (172800.0s)
[2025-12-03 07:12:08] 2025-12-03 12:10:54,875 | INFO     | monitor loop #1539: job 0:6899576351 is in state 'finished'
[2025-12-03 07:12:08] 2025-12-03 12:10:54,875 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 07:12:08] 2025-12-03 12:10:56,154 | INFO     | time since job start (27543s) is within the limit (172800.0s)
[2025-12-03 07:12:08] 2025-12-03 12:10:57,387 | INFO     | monitor loop #1540: job 0:6899576351 is in state 'finished'
[2025-12-03 07:12:08] 2025-12-03 12:10:57,402 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 07:12:08] 2025-12-03 12:10:58,160 | INFO     | time since job start (27545s) is within the limit (172800.0s)
[2025-12-03 07:12:08] 2025-12-03 12:10:59,907 | INFO     | monitor loop #1541: job 0:6899576351 is in state 'finished'
[2025-12-03 07:12:08] 2025-12-03 12:10:59,907 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 07:12:08] 2025-12-03 12:11:00,167 | INFO     | time since job start (27547s) is within the limit (172800.0s)
[2025-12-03 07:12:08] 2025-12-03 12:11:02,174 | INFO     | time since job start (27549s) is within the limit (172800.0s)
[2025-12-03 07:12:08] 2025-12-03 12:11:02,412 | INFO     | monitor loop #1542: job 0:6899576351 is in state 'finished'
[2025-12-03 07:12:08] 2025-12-03 12:11:02,412 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 07:12:08] 2025-12-03 12:11:02,778 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-03 07:12:08] 2025-12-03 12:11:02,787 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3788.2945703124988
[2025-12-03 07:12:08] 2025-12-03 12:11:02,814 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6899576351/memory_monitor_summary.json (trf name=prmon)
[2025-12-03 07:12:08] 2025-12-03 12:11:02,815 | INFO     | extracted standard info from prmon json
[2025-12-03 07:12:08] 2025-12-03 12:11:02,815 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 07:12:08] 2025-12-03 12:11:02,829 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 07:12:08] 2025-12-03 12:11:02,874 | INFO     | fitting pss+swap vs Time
[2025-12-03 07:12:08] 2025-12-03 12:11:02,875 | INFO     | sum of square deviations: 28066188984.062267
[2025-12-03 07:12:08] 2025-12-03 12:11:02,878 | INFO     | sum of deviations: -406940173992.7484
[2025-12-03 07:12:08] 2025-12-03 12:11:02,878 | INFO     | mean x: 1764750114.7505567
[2025-12-03 07:12:08] 2025-12-03 12:11:02,878 | INFO     | mean y: 2762410.9933184856
[2025-12-03 07:12:08] 2025-12-03 12:11:02,878 | INFO     | intersect: 25590408783.5779
[2025-12-03 07:12:08] 2025-12-03 12:11:02,878 | INFO     | chi2: 24.315722820732688
[2025-12-03 07:12:08] 2025-12-03 12:11:02,879 | INFO     | sum of square deviations: 27139136893.56752
[2025-12-03 07:12:08] 2025-12-03 12:11:02,896 | INFO     | sum of deviations: -267319377068.1623
[2025-12-03 07:12:08] 2025-12-03 12:11:02,897 | INFO     | mean x: 1764749962.2702703
[2025-12-03 07:12:08] 2025-12-03 12:11:02,897 | INFO     | mean y: 2785363.768018018
[2025-12-03 07:12:08] 2025-12-03 12:11:02,897 | INFO     | intersect: 17385499576.281
[2025-12-03 07:12:08] 2025-12-03 12:11:02,897 | INFO     | chi2: 20.731835474380738
[2025-12-03 07:12:08] 2025-12-03 12:11:02,897 | INFO     | current chi2=20.731835474380738 (change=14.738971046734278 %)
[2025-12-03 07:12:08] 2025-12-03 12:11:02,897 | INFO     | right removable region: 443
[2025-12-03 07:12:08] 2025-12-03 12:11:02,897 | INFO     | sum of square deviations: 27138657433.567497
[2025-12-03 07:12:08] 2025-12-03 12:11:02,916 | INFO     | sum of deviations: -540836697807.3784
[2025-12-03 07:12:08] 2025-12-03 12:11:02,916 | INFO     | mean x: 1764750267.2702703
[2025-12-03 07:12:08] 2025-12-03 12:11:02,916 | INFO     | mean y: 2784379.0698198196
[2025-12-03 07:12:08] 2025-12-03 12:11:02,916 | INFO     | intersect: 35171867792.33415
[2025-12-03 07:12:08] 2025-12-03 12:11:02,917 | INFO     | chi2: 21.666908618636548
[2025-12-03 07:12:08] 2025-12-03 12:11:02,917 | INFO     | current chi2=21.666908618636548 (change=10.893421600601737 %)
[2025-12-03 07:12:08] 2025-12-03 12:11:02,917 | INFO     | left removable region: 10
[2025-12-03 07:12:08] 2025-12-03 12:11:02,917 | INFO     | sum of square deviations: 25171109665.09004
[2025-12-03 07:12:08] 2025-12-03 12:11:02,921 | INFO     | sum of deviations: -398942599514.01843
[2025-12-03 07:12:08] 2025-12-03 12:11:02,921 | INFO     | mean x: 1764750236.808314
[2025-12-03 07:12:08] 2025-12-03 12:11:02,921 | INFO     | mean y: 2816444.7829099307
[2025-12-03 07:12:08] 2025-12-03 12:11:02,921 | INFO     | intersect: 27972741344.109753
[2025-12-03 07:12:08] 2025-12-03 12:11:02,921 | INFO     | chi2: 17.359318376538333
[2025-12-03 07:12:08] 2025-12-03 12:11:02,922 | INFO     | current memory leak: -15.85 B/s (using 433 data points, chi2=17.36)
[2025-12-03 07:12:08] 2025-12-03 12:11:02,922 | INFO     | could have reported an average CPU frequency of 3780 MHz (18 samples)
[2025-12-03 07:12:08] 2025-12-03 12:11:02,922 | INFO     | ..............................
[2025-12-03 07:12:08] 2025-12-03 12:11:02,922 | INFO     | . Timing measurements:
[2025-12-03 07:12:08] 2025-12-03 12:11:02,922 | INFO     | . get job = 0 s
[2025-12-03 07:12:08] 2025-12-03 12:11:02,922 | INFO     | . initial setup = 6 s
[2025-12-03 07:12:08] 2025-12-03 12:11:02,922 | INFO     | . payload setup = 48 s
[2025-12-03 07:12:08] 2025-12-03 12:11:02,922 | INFO     | . stage-in = 0 s
[2025-12-03 07:12:08] 2025-12-03 12:11:02,922 | INFO     | . payload execution = 27386 s
[2025-12-03 07:12:08] 2025-12-03 12:11:02,922 | INFO     | . stage-out = 8 s
[2025-12-03 07:12:08] 2025-12-03 12:11:02,923 | INFO     | . log creation = 1 s
[2025-12-03 07:12:08] 2025-12-03 12:11:02,923 | INFO     | ..............................
[2025-12-03 07:12:08] 2025-12-03 12:11:02,975 | INFO     | 
[2025-12-03 07:12:08] 2025-12-03 12:11:02,975 | INFO     | job summary report
[2025-12-03 07:12:08] 2025-12-03 12:11:02,975 | INFO     | --------------------------------------------------
[2025-12-03 07:12:08] 2025-12-03 12:11:02,976 | INFO     | PanDA job id: 6899576351
[2025-12-03 07:12:08] 2025-12-03 12:11:02,976 | INFO     | task id: 47556173
[2025-12-03 07:12:08] 2025-12-03 12:11:02,976 | INFO     | errors: (none)
[2025-12-03 07:12:08] 2025-12-03 12:11:02,976 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 07:12:08] 2025-12-03 12:11:02,976 | INFO     | pilot state: finished 
[2025-12-03 07:12:08] 2025-12-03 12:11:02,976 | INFO     | transexitcode: 0
[2025-12-03 07:12:08] 2025-12-03 12:11:02,976 | INFO     | exeerrorcode: 0
[2025-12-03 07:12:08] 2025-12-03 12:11:02,976 | INFO     | exeerrordiag: 
[2025-12-03 07:12:08] 2025-12-03 12:11:02,976 | INFO     | exitcode: 0
[2025-12-03 07:12:08] 2025-12-03 12:11:02,976 | INFO     | exitmsg: OK
[2025-12-03 07:12:08] 2025-12-03 12:11:02,976 | INFO     | cpuconsumptiontime: 139945 s
[2025-12-03 07:12:08] 2025-12-03 12:11:02,976 | INFO     | nevents: 1000
[2025-12-03 07:12:08] 2025-12-03 12:11:02,976 | INFO     | neventsw: 0
[2025-12-03 07:12:08] 2025-12-03 12:11:02,976 | INFO     | pid: 4140426
[2025-12-03 07:12:08] 2025-12-03 12:11:02,976 | INFO     | pgrp: 4140426
[2025-12-03 07:12:08] 2025-12-03 12:11:02,976 | INFO     | corecount: 8
[2025-12-03 07:12:08] 2025-12-03 12:11:02,976 | INFO     | event service: False
[2025-12-03 07:12:08] 2025-12-03 12:11:02,976 | INFO     | sizes: {0: 2284089, 1: 2284344, 12: 2284344, 23: 2284372, 29: 2284662, 34: 2284690, 27439: 2322224, 27440: 2322223, 27449: 2331273, 27452: 2331329, 27488: 2331575}
[2025-12-03 07:12:08] 2025-12-03 12:11:02,977 | INFO     | --------------------------------------------------
[2025-12-03 07:12:08] 2025-12-03 12:11:02,977 | INFO     | 
[2025-12-03 07:12:08] 2025-12-03 12:11:02,977 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-12-03 07:12:08] 2025-12-03 12:11:03,081 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 07:12:08] 2025-12-03 12:11:03,081 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 07:12:08] 2025-12-03 12:11:03,082 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 07:12:08] 2025-12-03 12:11:03,082 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 07:12:08] 2025-12-03 12:11:03,082 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 07:12:08] 2025-12-03 12:11:03,082 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 07:12:08] 2025-12-03 12:11:03,082 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 07:12:08] 2025-12-03 12:11:03,082 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 07:12:08] 2025-12-03 12:11:03,082 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 07:12:08] 2025-12-03 12:11:03,082 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 07:12:08] 2025-12-03 12:11:03,082 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 07:12:08] 2025-12-03 12:11:03,082 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 07:12:08] 2025-12-03 12:11:03,082 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 07:12:08] 2025-12-03 12:11:03,082 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 07:12:08] 2025-12-03 12:11:03,082 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 07:12:08] 2025-12-03 12:11:03,082 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 07:12:08] 2025-12-03 12:11:03,082 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 07:12:08] 2025-12-03 12:11:03,082 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 07:12:08] 2025-12-03 12:11:03,082 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 07:12:08] 2025-12-03 12:11:03,082 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 07:12:08] 2025-12-03 12:11:03,082 | INFO     | job 6899576351 has completed (purged errors)
[2025-12-03 07:12:08] 2025-12-03 12:11:03,083 | INFO     | overall cleanup function is called
[2025-12-03 07:12:08] 2025-12-03 12:11:04,161 | INFO     | --- collectZombieJob: --- 10, [4140426]
[2025-12-03 07:12:08] 2025-12-03 12:11:04,161 | INFO     | zombie collector waiting for pid 4140426
[2025-12-03 07:12:08] 2025-12-03 12:11:04,161 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 07:12:08] 2025-12-03 12:11:04,161 | INFO     | collected zombie processes
[2025-12-03 07:12:08] 2025-12-03 12:11:04,161 | INFO     | will attempt to kill all subprocesses of pid=4140426
[2025-12-03 07:12:08] 2025-12-03 12:11:06,377 | INFO     | process IDs to be killed: [4140426] (in reverse order)
[2025-12-03 07:12:08] 2025-12-03 12:11:07,109 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 07:12:08] 2025-12-03 12:11:07,110 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 07:12:08] 2025-12-03 12:11:07,158 | INFO     | did not find any defunct processes belonging to 4140426
[2025-12-03 07:12:08] 2025-12-03 12:11:07,255 | INFO     | did not find any defunct processes belonging to 4140426
[2025-12-03 07:12:08] 2025-12-03 12:11:07,260 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 07:12:08] 2025-12-03 12:11:07,260 | INFO     | ready for new job
[2025-12-03 07:12:08] 2025-12-03 12:11:07,260 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 07:12:08] 2025-12-03 12:11:07,262 | INFO     | ***************************************
[2025-12-03 07:12:08] 2025-12-03 12:11:07,262 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 07:12:08] 2025-12-03 12:11:07,262 | INFO     | ***************************************
[2025-12-03 07:12:08] 2025-12-03 12:11:07,262 | INFO     | 
[2025-12-03 07:12:08] 2025-12-03 12:11:07,277 | INFO     | architecture information:
[2025-12-03 07:12:08] 2025-12-03 12:11:07,287 | INFO     | executing command: cat /etc/os-release
[2025-12-03 07:12:08] 2025-12-03 12:11:07,338 | INFO     | cat /etc/os-release:
[2025-12-03 07:12:08] NAME="CentOS Linux"
[2025-12-03 07:12:08] VERSION="7 (Core)"
[2025-12-03 07:12:08] ID="centos"
[2025-12-03 07:12:08] ID_LIKE="rhel fedora"
[2025-12-03 07:12:08] VERSION_ID="7"
[2025-12-03 07:12:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 07:12:08] ANSI_COLOR="0;31"
[2025-12-03 07:12:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 07:12:08] HOME_URL="https://www.centos.org/"
[2025-12-03 07:12:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 07:12:08] 
[2025-12-03 07:12:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 07:12:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 07:12:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 07:12:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 07:12:08] 
[2025-12-03 07:12:08] 2025-12-03 12:11:07,338 | INFO     | ***************************************
[2025-12-03 07:12:08] 2025-12-03 12:11:07,841 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-12-03 07:12:08] 2025-12-03 12:11:07,924 | INFO     | sufficient remaining disk space (90105184256 B)
[2025-12-03 07:12:08] 2025-12-03 12:11:07,925 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 07:12:08] 2025-12-03 12:11:07,925 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 07:12:08] 2025-12-03 12:11:07,925 | INFO     | update_server=False
[2025-12-03 07:12:08] 2025-12-03 12:11:07,925 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 07:12:08] 2025-12-03 12:11:07,925 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 07:12:08] 2025-12-03 12:11:07,989 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 07:12:08] 2025-12-03 12:11:08,481 | INFO     | all data control threads have been joined
[2025-12-03 07:12:08] 2025-12-03 12:11:08,507 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 07:12:08] 2025-12-03 12:11:08,507 | INFO     | aborting loop
[2025-12-03 07:12:08] 2025-12-03 12:11:08,587 | INFO     | all payload control threads have been joined
[2025-12-03 07:12:08] 2025-12-03 12:11:08,898 | INFO     | all job control threads have been joined
[2025-12-03 07:12:08] 2025-12-03 12:11:08,932 | INFO     | [job] retrieve thread has finished
[2025-12-03 07:12:08] 2025-12-03 12:11:08,995 | INFO     | [job] queue monitor thread has finished
[2025-12-03 07:12:08] 2025-12-03 12:11:09,050 | INFO     | [job] validate thread has finished
[2025-12-03 07:12:08] 2025-12-03 12:11:09,129 | INFO     | [payload] validate_post thread has finished
[2025-12-03 07:12:08] 2025-12-03 12:11:09,165 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 07:12:08] 2025-12-03 12:11:09,171 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 07:12:08] 2025-12-03 12:11:09,487 | INFO     | [data] control thread has finished
[2025-12-03 07:12:08] 2025-12-03 12:11:09,513 | INFO     | [job] job monitor thread has finished
[2025-12-03 07:12:08] 2025-12-03 12:11:09,593 | INFO     | [payload] control thread has finished
[2025-12-03 07:12:08] 2025-12-03 12:11:09,651 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 07:12:08] 2025-12-03 12:11:09,904 | INFO     | [job] control thread has finished
[2025-12-03 07:12:08] 2025-12-03 12:11:09,938 | INFO     | [data] copytool_out thread has finished
[2025-12-03 07:12:08] 2025-12-03 12:11:09,956 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 07:12:08] 2025-12-03 12:11:10,027 | INFO     | [data] copytool_in thread has finished
[2025-12-03 07:12:08] 2025-12-03 12:11:10,068 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 07:12:08] 2025-12-03 12:11:10,121 | INFO     | [payload] failed_post thread has finished
[2025-12-03 07:12:08] 2025-12-03 12:11:13,198 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 07:12:08] 2025-12-03 12:11:37,853 | INFO     | PID=4078552 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-03 07:12:08] 2025-12-03 12:11:37,853 | INFO     | .. there are 39 such processes running
[2025-12-03 07:12:08] 2025-12-03 12:11:37,854 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 07:12:08] 2025-12-03 12:11:37,854 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 07:12:08] 2025-12-03 12:11:37,854 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 07:12:08] 2025-12-03 12:11:40,819 | INFO     | [monitor] cgroup control has ended
[2025-12-03 07:12:08] 2025-12-03 12:11:41,778 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139713996945216)>', '<ExcThread(monitor, started 139713507735296)>']
[2025-12-03 07:12:08] 2025-12-03 12:11:41,878 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 07:12:08] 2025-12-03 12:11:41,878 | INFO     | [monitor] control thread has ended
[2025-12-03 07:12:08] 2025-12-03 12:11:46,804 | INFO     | all workflow threads have been joined
[2025-12-03 07:12:08] 2025-12-03 12:11:46,804 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 07:12:08] 2025-12-03 12:11:46,804 | INFO     | traces error code: 0
[2025-12-03 07:12:08] 2025-12-03 12:11:46,804 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 07:12:08] 2025-12-03 12:11:47,680 [wrapper] ==== pilot stdout END ====
[2025-12-03 07:12:08] 2025-12-03 12:11:47,695 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 07:12:08] 2025-12-03 12:11:47,725 [wrapper] pilotpid: 4078552
[2025-12-03 07:12:08] 2025-12-03 12:11:47,744 [wrapper] Pilot exit status: 0
[2025-12-03 07:12:08] 2025-12-03 12:11:47,847 [wrapper] pandaids: 6899576351
[2025-12-03 07:12:08] 2025-12-03 12:11:48,257 [wrapper] cleanup supervisor_pilot 3862571 4078553
[2025-12-03 07:12:08] 2025-12-03 12:11:48,293 [wrapper] Test setup, not cleaning
[2025-12-03 07:12:08] 2025-12-03 12:11:48,375 [wrapper] apfmon messages muted
[2025-12-03 07:12:08] 2025-12-03 12:11:48,582 [wrapper] ==== wrapper stdout END ====
[2025-12-03 07:12:08] 2025-12-03 12:11:48,793 [wrapper] ==== wrapper stderr END ====
[2025-12-03 07:12:08]  *** Error codes and diagnostics ***
[2025-12-03 07:12:08]     "exeErrorCode": 0,
[2025-12-03 07:12:08]     "exeErrorDiag": "",
[2025-12-03 07:12:08]     "pilotErrorCode": 0,
[2025-12-03 07:12:08]     "pilotErrorDiag": "",
[2025-12-03 07:12:08]  *** Listing of results directory ***
[2025-12-03 07:12:08] total 1323228
[2025-12-03 07:12:08] -rw-r--r--. 1 boincer umatlas    576529 Nov 27 03:46 pilot3.tar.gz
[2025-12-03 07:12:08] -rwx------. 1 boincer umatlas     36292 Nov 27 03:47 runpilot2-wrapper.sh
[2025-12-03 07:12:08] -rw-r--r--. 1 boincer umatlas      5112 Nov 27 03:49 queuedata.json
[2025-12-03 07:12:08] -rw-r--r--. 1 boincer umatlas       100 Dec  2 23:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 07:12:08] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  2 23:30 run_atlas
[2025-12-03 07:12:08] -rw-r--r--. 1 boincer umatlas       105 Dec  2 23:30 job.xml
[2025-12-03 07:12:08] -rw-r--r--. 2 boincer umatlas 410449901 Dec  2 23:30 EVNT.47483658._003387.pool.root.1
[2025-12-03 07:12:08] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 23:30 start_atlas.sh
[2025-12-03 07:12:08] drwxrwx--x. 2 boincer umatlas      4096 Dec  2 23:30 shared
[2025-12-03 07:12:08] -rw-r--r--. 2 boincer umatlas    590108 Dec  2 23:30 input.tar.gz
[2025-12-03 07:12:08] -rw-r--r--. 1 boincer umatlas         0 Dec  2 23:30 boinc_lockfile
[2025-12-03 07:12:08] -rw-r--r--. 1 boincer umatlas      2787 Dec  2 23:30 pandaJob.out
[2025-12-03 07:12:08] -rw-------. 1 boincer umatlas        57 Dec  2 23:30 setup.sh.local
[2025-12-03 07:12:08] -rw-------. 1 boincer umatlas    989297 Dec  2 23:31 agis_schedconf.cvmfs.json
[2025-12-03 07:12:08] drwx------. 5 boincer umatlas      4096 Dec  2 23:31 pilot3
[2025-12-03 07:12:08] -rw-r--r--. 1 boincer umatlas       533 Dec  3 06:40 boinc_task_state.xml
[2025-12-03 07:12:08] -rw-------. 1 boincer umatlas 930541795 Dec  3 07:09 HITS.47556173._003437.pool.root.1
[2025-12-03 07:12:08] -rw-------. 1 boincer umatlas      1063 Dec  3 07:10 memory_monitor_summary.json
[2025-12-03 07:12:08] -rw-------. 1 boincer umatlas   1516240 Dec  3 07:10 agis_ddmendpoints.agis.ALL.json
[2025-12-03 07:12:08] -rw-------. 1 boincer umatlas   1700749 Dec  3 07:10 log.47556173._003437.job.log.tgz.1
[2025-12-03 07:12:08] -rw-r--r--. 1 boincer umatlas      7172 Dec  3 07:10 init_data.xml
[2025-12-03 07:12:08] -rw-------. 1 boincer umatlas      8629 Dec  3 07:11 heartbeat.json
[2025-12-03 07:12:08] -rw-------. 1 boincer umatlas        95 Dec  3 07:11 pilot_heartbeat.json
[2025-12-03 07:12:08] -rw-------. 1 boincer umatlas      4824 Dec  3 07:11 pilotlog.txt
[2025-12-03 07:12:08] -rw-------. 1 boincer umatlas   3333371 Dec  3 07:11 log.47556173._003437.job.log.1
[2025-12-03 07:12:08] -rw-------. 1 boincer umatlas       353 Dec  3 07:11 output.list
[2025-12-03 07:12:08] -rw-r--r--. 1 boincer umatlas       620 Dec  3 07:11 runtime_log
[2025-12-03 07:12:08] -rw-------. 1 boincer umatlas   5058560 Dec  3 07:11 result.tar.gz
[2025-12-03 07:12:08] -rw-------. 1 boincer umatlas       664 Dec  3 07:11 toJMDm1pmi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmaoNKDmSY8cFm.diag
[2025-12-03 07:12:08] -rw-r--r--. 1 boincer umatlas      9333 Dec  3 07:11 runtime_log.err
[2025-12-03 07:12:08] -rw-r--r--. 1 boincer umatlas      8192 Dec  3 07:12 boinc_mmap_file
[2025-12-03 07:12:08] -rw-r--r--. 1 boincer umatlas     21819 Dec  3 07:12 stderr.txt
[2025-12-03 07:12:08] -rw-r--r--. 1 boincer umatlas        29 Dec  3 07:12 wrapper_checkpoint.txt
[2025-12-03 07:12:08] HITS file was successfully produced:
[2025-12-03 07:12:08] -rw-------. 1 boincer umatlas 930541795 Dec  3 07:09 shared/HITS.pool.root.1
[2025-12-03 07:12:08]  *** Contents of shared directory: ***
[2025-12-03 07:12:08] total 1315112
[2025-12-03 07:12:08] -rw-r--r--. 2 boincer umatlas 410449901 Dec  2 23:30 ATLAS.root_0
[2025-12-03 07:12:08] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 23:30 start_atlas.sh
[2025-12-03 07:12:08] -rw-r--r--. 2 boincer umatlas    590108 Dec  2 23:30 input.tar.gz
[2025-12-03 07:12:08] -rw-------. 1 boincer umatlas 930541795 Dec  3 07:09 HITS.pool.root.1
[2025-12-03 07:12:08] -rw-------. 1 boincer umatlas   5058560 Dec  3 07:11 result.tar.gz
07:12:10 (4056140): run_atlas exited; CPU time 140373.493628
07:12:10 (4056140): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN