Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
15:13:38 (571951): wrapper (7.7.26015): starting
15:13:38 (571951): wrapper: running run_atlas (--nthreads 10)
[2025-12-08 15:13:38] Arguments: --nthreads 10
[2025-12-08 15:13:38] Threads: 10
[2025-12-08 15:13:38] Checking for CVMFS
[2025-12-08 15:13:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-08 15:13:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-08 15:13:39] Running cvmfs_config stat atlas.cern.ch
[2025-12-08 15:13:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-08 15:13:39] 2.13.3.0 11319 3369 80652 153785 0 81 2395451 4096001 12870 130560 0 491383539 100.000 197145 631 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-12-08 15:13:39] CVMFS is ok
[2025-12-08 15:13:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-08 15:13:39] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-08 15:13:39] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-08 15:13:39] Further information can be found at the LHC@home message board.
[2025-12-08 15:13:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-08 15:13:39] Checking for apptainer binary...
[2025-12-08 15:13:39] apptainer is not installed, using version from CVMFS
[2025-12-08 15:13:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-08 15:13:39] 7950x-linux
[2025-12-08 15:13:39] apptainer works
[2025-12-08 15:13:39] Set ATHENA_PROC_NUMBER=10
[2025-12-08 15:13:39] Set ATHENA_CORE_NUMBER=10
[2025-12-08 15:13:39] Starting ATLAS job with PandaID=6896990104
[2025-12-08 15:13:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc538/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-09 07:30:49]  *** The last 200 lines of the pilot log: ***
[2025-12-09 07:30:49] 2025-12-09 15:30:15,625 | INFO     | time since job start (58578s) is within the limit (172800.0s)
[2025-12-09 07:30:49] 2025-12-09 15:30:15,840 | INFO     | monitor loop #4252: job 0:6896990104 is in state 'finished'
[2025-12-09 07:30:49] 2025-12-09 15:30:15,840 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-09 07:30:49] 2025-12-09 15:30:17,292 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-09 07:30:49] 2025-12-09 15:30:17,295 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3999.99184375
[2025-12-09 07:30:49] 2025-12-09 15:30:17,298 | INFO     | using path: /var/lib/multiboinc/boinc538/slots/1/PanDA_Pilot-6896990104/memory_monitor_summary.json (trf name=prmon)
[2025-12-09 07:30:49] 2025-12-09 15:30:17,298 | INFO     | extracted standard info from prmon json
[2025-12-09 07:30:49] 2025-12-09 15:30:17,299 | INFO     | extracted standard memory fields from prmon json
[2025-12-09 07:30:49] 2025-12-09 15:30:17,299 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-09 07:30:49] 2025-12-09 15:30:17,306 | INFO     | fitting pss+swap vs Time
[2025-12-09 07:30:49] 2025-12-09 15:30:17,307 | INFO     | sum of square deviations: 274341590320.0
[2025-12-09 07:30:49] 2025-12-09 15:30:17,318 | INFO     | sum of deviations: 1813892976199.5
[2025-12-09 07:30:49] 2025-12-09 15:30:17,321 | INFO     | mean x: 1765264917.5
[2025-12-09 07:30:49] 2025-12-09 15:30:17,321 | INFO     | mean y: 3163450.4010416665
[2025-12-09 07:30:49] 2025-12-09 15:30:17,321 | INFO     | intersect: -11668423169.949638
[2025-12-09 07:30:49] 2025-12-09 15:30:17,321 | INFO     | chi2: 4.486443564674835
[2025-12-09 07:30:49] 2025-12-09 15:30:17,322 | INFO     | sum of square deviations: 270077287110.0
[2025-12-09 07:30:49] 2025-12-09 15:30:17,335 | INFO     | sum of deviations: 2098424128245.0002
[2025-12-09 07:30:49] 2025-12-09 15:30:17,336 | INFO     | mean x: 1765264765.0
[2025-12-09 07:30:49] 2025-12-09 15:30:17,336 | INFO     | mean y: 3173615.5560209425
[2025-12-09 07:30:49] 2025-12-09 15:30:17,336 | INFO     | intersect: -13712434295.256647
[2025-12-09 07:30:49] 2025-12-09 15:30:17,336 | INFO     | chi2: 2.0802380600994304
[2025-12-09 07:30:49] 2025-12-09 15:30:17,336 | INFO     | current chi2=2.0802380600994304 (change=53.63280446724621 %)
[2025-12-09 07:30:49] 2025-12-09 15:30:17,337 | INFO     | sum of square deviations: 265857403337.5
[2025-12-09 07:30:49] 2025-12-09 15:30:17,358 | INFO     | sum of deviations: 2116267746618.9998
[2025-12-09 07:30:49] 2025-12-09 15:30:17,359 | INFO     | mean x: 1765264612.5
[2025-12-09 07:30:49] 2025-12-09 15:30:17,359 | INFO     | mean y: 3174256.0589473685
[2025-12-09 07:30:49] 2025-12-09 15:30:17,359 | INFO     | intersect: -14048616353.432404
[2025-12-09 07:30:49] 2025-12-09 15:30:17,359 | INFO     | chi2: 1.9926442983451178
[2025-12-09 07:30:49] 2025-12-09 15:30:17,359 | INFO     | current chi2=1.9926442983451178 (change=4.2107566164867585 %)
[2025-12-09 07:30:49] 2025-12-09 15:30:17,359 | INFO     | right removable region: 949
[2025-12-09 07:30:49] 2025-12-09 15:30:17,360 | INFO     | sum of square deviations: 270077287110.0
[2025-12-09 07:30:49] 2025-12-09 15:30:17,374 | INFO     | sum of deviations: 1569595602571.9998
[2025-12-09 07:30:49] 2025-12-09 15:30:17,374 | INFO     | mean x: 1765265070.0
[2025-12-09 07:30:49] 2025-12-09 15:30:17,374 | INFO     | mean y: 3172172.042931937
[2025-12-09 07:30:49] 2025-12-09 15:30:17,374 | INFO     | intersect: -10255936695.995464
[2025-12-09 07:30:49] 2025-12-09 15:30:17,375 | INFO     | chi2: 2.6970382172398732
[2025-12-09 07:30:49] 2025-12-09 15:30:17,375 | INFO     | current chi2=2.6970382172398732 (change=39.884717630782305 %)
[2025-12-09 07:30:49] 2025-12-09 15:30:17,375 | INFO     | sum of square deviations: 265857403337.5
[2025-12-09 07:30:49] 2025-12-09 15:30:17,386 | INFO     | sum of deviations: 1495771064777.5
[2025-12-09 07:30:49] 2025-12-09 15:30:17,386 | INFO     | mean x: 1765265222.5
[2025-12-09 07:30:49] 2025-12-09 15:30:17,386 | INFO     | mean y: 3174839.4684210527
[2025-12-09 07:30:49] 2025-12-09 15:30:17,386 | INFO     | intersect: -9928587858.603016
[2025-12-09 07:30:49] 2025-12-09 15:30:17,386 | INFO     | chi2: 2.6381432238511566
[2025-12-09 07:30:49] 2025-12-09 15:30:17,387 | INFO     | current chi2=2.6381432238511566 (change=2.1836914661516835 %)
[2025-12-09 07:30:49] 2025-12-09 15:30:17,387 | INFO     | left removable region: 20
[2025-12-09 07:30:49] 2025-12-09 15:30:17,387 | INFO     | sum of square deviations: 248613703280.0
[2025-12-09 07:30:49] 2025-12-09 15:30:17,397 | INFO     | sum of deviations: 1694290932224.0
[2025-12-09 07:30:49] 2025-12-09 15:30:17,397 | INFO     | mean x: 1765265192.0
[2025-12-09 07:30:49] 2025-12-09 15:30:17,397 | INFO     | mean y: 3189455.5920344456
[2025-12-09 07:30:49] 2025-12-09 15:30:17,397 | INFO     | intersect: -12027011487.948885
[2025-12-09 07:30:49] 2025-12-09 15:30:17,398 | INFO     | chi2: 0.10503435669320636
[2025-12-09 07:30:49] 2025-12-09 15:30:17,398 | INFO     | current memory leak: 6.81 B/s (using 929 data points, chi2=0.11)
[2025-12-09 07:30:49] 2025-12-09 15:30:17,398 | INFO     | could have reported an average CPU frequency of 3999 MHz (36 samples)
[2025-12-09 07:30:49] 2025-12-09 15:30:17,398 | INFO     | ..............................
[2025-12-09 07:30:49] 2025-12-09 15:30:17,398 | INFO     | . Timing measurements:
[2025-12-09 07:30:49] 2025-12-09 15:30:17,399 | INFO     | . get job = 0 s
[2025-12-09 07:30:49] 2025-12-09 15:30:17,399 | INFO     | . initial setup = 4 s
[2025-12-09 07:30:49] 2025-12-09 15:30:17,399 | INFO     | . payload setup = 7 s
[2025-12-09 07:30:49] 2025-12-09 15:30:17,399 | INFO     | . stage-in = 0 s
[2025-12-09 07:30:49] 2025-12-09 15:30:17,399 | INFO     | . payload execution = 58539 s
[2025-12-09 07:30:49] 2025-12-09 15:30:17,399 | INFO     | . stage-out = 3 s
[2025-12-09 07:30:49] 2025-12-09 15:30:17,399 | INFO     | . log creation = 0 s
[2025-12-09 07:30:49] 2025-12-09 15:30:17,399 | INFO     | ..............................
[2025-12-09 07:30:49] 2025-12-09 15:30:17,447 | INFO     | 
[2025-12-09 07:30:49] 2025-12-09 15:30:17,447 | INFO     | job summary report
[2025-12-09 07:30:49] 2025-12-09 15:30:17,447 | INFO     | --------------------------------------------------
[2025-12-09 07:30:49] 2025-12-09 15:30:17,447 | INFO     | PanDA job id: 6896990104
[2025-12-09 07:30:49] 2025-12-09 15:30:17,447 | INFO     | task id: 47556161
[2025-12-09 07:30:49] 2025-12-09 15:30:17,447 | INFO     | errors: (none)
[2025-12-09 07:30:49] 2025-12-09 15:30:17,447 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-09 07:30:49] 2025-12-09 15:30:17,448 | INFO     | pilot state: finished 
[2025-12-09 07:30:49] 2025-12-09 15:30:17,448 | INFO     | transexitcode: 0
[2025-12-09 07:30:49] 2025-12-09 15:30:17,448 | INFO     | exeerrorcode: 0
[2025-12-09 07:30:49] 2025-12-09 15:30:17,448 | INFO     | exeerrordiag: 
[2025-12-09 07:30:49] 2025-12-09 15:30:17,448 | INFO     | exitcode: 0
[2025-12-09 07:30:49] 2025-12-09 15:30:17,448 | INFO     | exitmsg: OK
[2025-12-09 07:30:49] 2025-12-09 15:30:17,448 | INFO     | cpuconsumptiontime: 136568 s
[2025-12-09 07:30:49] 2025-12-09 15:30:17,448 | INFO     | nevents: 1000
[2025-12-09 07:30:49] 2025-12-09 15:30:17,448 | INFO     | neventsw: 0
[2025-12-09 07:30:49] 2025-12-09 15:30:17,448 | INFO     | pid: 582539
[2025-12-09 07:30:49] 2025-12-09 15:30:17,448 | INFO     | pgrp: 582539
[2025-12-09 07:30:49] 2025-12-09 15:30:17,448 | INFO     | corecount: 10
[2025-12-09 07:30:49] 2025-12-09 15:30:17,448 | INFO     | event service: False
[2025-12-09 07:30:49] 2025-12-09 15:30:17,448 | INFO     | sizes: {0: 2284051, 1: 2284306, 6: 2284568, 12: 2284596, 58551: 2336579, 58555: 2345601, 58556: 2345785, 58563: 2346031}
[2025-12-09 07:30:49] 2025-12-09 15:30:17,448 | INFO     | --------------------------------------------------
[2025-12-09 07:30:49] 2025-12-09 15:30:17,448 | INFO     | 
[2025-12-09 07:30:49] 2025-12-09 15:30:17,448 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc538/slots/1
[2025-12-09 07:30:49] 2025-12-09 15:30:17,472 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-09 07:30:49] 2025-12-09 15:30:17,472 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-09 07:30:49] 2025-12-09 15:30:17,472 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-09 07:30:49] 2025-12-09 15:30:17,472 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-09 07:30:49] 2025-12-09 15:30:17,473 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-09 07:30:49] 2025-12-09 15:30:17,473 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-09 07:30:49] 2025-12-09 15:30:17,473 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-09 07:30:49] 2025-12-09 15:30:17,473 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-09 07:30:49] 2025-12-09 15:30:17,473 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-09 07:30:49] 2025-12-09 15:30:17,473 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-09 07:30:49] 2025-12-09 15:30:17,473 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-09 07:30:49] 2025-12-09 15:30:17,473 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-09 07:30:49] 2025-12-09 15:30:17,473 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-09 07:30:49] 2025-12-09 15:30:17,473 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-09 07:30:49] 2025-12-09 15:30:17,473 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-09 07:30:49] 2025-12-09 15:30:17,473 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-09 07:30:49] 2025-12-09 15:30:17,473 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-09 07:30:49] 2025-12-09 15:30:17,473 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-09 07:30:49] 2025-12-09 15:30:17,473 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-09 07:30:49] 2025-12-09 15:30:17,473 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-09 07:30:49] 2025-12-09 15:30:17,473 | INFO     | job 6896990104 has completed (purged errors)
[2025-12-09 07:30:49] 2025-12-09 15:30:17,473 | INFO     | overall cleanup function is called
[2025-12-09 07:30:49] 2025-12-09 15:30:18,488 | INFO     | --- collectZombieJob: --- 10, [582539]
[2025-12-09 07:30:49] 2025-12-09 15:30:18,488 | INFO     | zombie collector waiting for pid 582539
[2025-12-09 07:30:49] 2025-12-09 15:30:18,488 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-09 07:30:49] 2025-12-09 15:30:18,488 | INFO     | collected zombie processes
[2025-12-09 07:30:49] 2025-12-09 15:30:18,488 | INFO     | will attempt to kill all subprocesses of pid=582539
[2025-12-09 07:30:49] 2025-12-09 15:30:18,850 | INFO     | process IDs to be killed: [582539] (in reverse order)
[2025-12-09 07:30:49] 2025-12-09 15:30:18,998 | WARNING  | found no corresponding commands to process id(s)
[2025-12-09 07:30:49] 2025-12-09 15:30:18,998 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-09 07:30:49] 2025-12-09 15:30:19,004 | INFO     | did not find any defunct processes belonging to 582539
[2025-12-09 07:30:49] 2025-12-09 15:30:19,012 | INFO     | did not find any defunct processes belonging to 582539
[2025-12-09 07:30:49] 2025-12-09 15:30:19,013 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-09 07:30:49] 2025-12-09 15:30:19,013 | INFO     | ready for new job
[2025-12-09 07:30:49] 2025-12-09 15:30:19,013 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-09 07:30:49] 2025-12-09 15:30:19,018 | INFO     | ***************************************
[2025-12-09 07:30:49] 2025-12-09 15:30:19,018 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-09 07:30:49] 2025-12-09 15:30:19,018 | INFO     | ***************************************
[2025-12-09 07:30:49] 2025-12-09 15:30:19,018 | INFO     | 
[2025-12-09 07:30:49] 2025-12-09 15:30:19,020 | INFO     | architecture information:
[2025-12-09 07:30:49] 2025-12-09 15:30:19,020 | INFO     | executing command: cat /etc/os-release
[2025-12-09 07:30:49] 2025-12-09 15:30:19,038 | INFO     | cat /etc/os-release:
[2025-12-09 07:30:49] NAME="CentOS Linux"
[2025-12-09 07:30:49] VERSION="7 (Core)"
[2025-12-09 07:30:49] ID="centos"
[2025-12-09 07:30:49] ID_LIKE="rhel fedora"
[2025-12-09 07:30:49] VERSION_ID="7"
[2025-12-09 07:30:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-09 07:30:49] ANSI_COLOR="0;31"
[2025-12-09 07:30:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-09 07:30:49] HOME_URL="https://www.centos.org/"
[2025-12-09 07:30:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-09 07:30:49] 
[2025-12-09 07:30:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-09 07:30:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-09 07:30:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-09 07:30:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-09 07:30:49] 
[2025-12-09 07:30:49] 2025-12-09 15:30:19,038 | INFO     | ***************************************
[2025-12-09 07:30:49] 2025-12-09 15:30:19,540 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc538/slots/1
[2025-12-09 07:30:49] 2025-12-09 15:30:19,558 | INFO     | sufficient remaining disk space (185673449472 B)
[2025-12-09 07:30:49] 2025-12-09 15:30:19,559 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-09 07:30:49] 2025-12-09 15:30:19,559 | INFO     | current server update state: UPDATING_FINAL
[2025-12-09 07:30:49] 2025-12-09 15:30:19,559 | INFO     | update_server=False
[2025-12-09 07:30:49] 2025-12-09 15:30:19,559 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-09 07:30:49] 2025-12-09 15:30:19,559 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-09 07:30:49] 2025-12-09 15:30:19,559 | INFO     | aborting loop
[2025-12-09 07:30:49] 2025-12-09 15:30:19,679 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-09 07:30:49] 2025-12-09 15:30:20,049 | INFO     | all job control threads have been joined
[2025-12-09 07:30:49] 2025-12-09 15:30:20,196 | INFO     | all data control threads have been joined
[2025-12-09 07:30:49] 2025-12-09 15:30:20,391 | INFO     | all payload control threads have been joined
[2025-12-09 07:30:49] 2025-12-09 15:30:20,564 | INFO     | [job] retrieve thread has finished
[2025-12-09 07:30:49] 2025-12-09 15:30:20,564 | INFO     | [job] job monitor thread has finished
[2025-12-09 07:30:49] 2025-12-09 15:30:20,654 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-09 07:30:49] 2025-12-09 15:30:20,780 | INFO     | [payload] validate_post thread has finished
[2025-12-09 07:30:49] 2025-12-09 15:30:20,859 | INFO     | [data] copytool_in thread has finished
[2025-12-09 07:30:49] 2025-12-09 15:30:21,054 | INFO     | [job] control thread has finished
[2025-12-09 07:30:49] 2025-12-09 15:30:21,201 | INFO     | [data] control thread has finished
[2025-12-09 07:30:49] 2025-12-09 15:30:21,252 | INFO     | [payload] failed_post thread has finished
[2025-12-09 07:30:49] 2025-12-09 15:30:21,346 | INFO     | [payload] execute_payloads thread has finished
[2025-12-09 07:30:49] 2025-12-09 15:30:21,396 | INFO     | [payload] control thread has finished
[2025-12-09 07:30:49] 2025-12-09 15:30:21,457 | INFO     | [job] validate thread has finished
[2025-12-09 07:30:49] 2025-12-09 15:30:21,549 | INFO     | [payload] validate_pre thread has finished
[2025-12-09 07:30:49] 2025-12-09 15:30:21,687 | INFO     | [data] copytool_out thread has finished
[2025-12-09 07:30:49] 2025-12-09 15:30:21,783 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-09 07:30:49] 2025-12-09 15:30:21,957 | INFO     | [job] create_data_payload thread has finished
[2025-12-09 07:30:49] 2025-12-09 15:30:22,457 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-09 07:30:49] 2025-12-09 15:30:23,462 | INFO     | [job] queue monitor thread has finished
[2025-12-09 07:30:49] 2025-12-09 15:30:24,662 | INFO     | [data] queue_monitor thread has finished
[2025-12-09 07:30:49] 2025-12-09 15:30:34,893 | INFO     | [monitor] cgroup control has ended
[2025-12-09 07:30:49] 2025-12-09 15:30:35,898 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137321270941504)>', '<ExcThread(monitor, started 137319952668416)>']
[2025-12-09 07:30:49] 2025-12-09 15:30:40,923 | INFO     | all workflow threads have been joined
[2025-12-09 07:30:49] 2025-12-09 15:30:40,923 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-09 07:30:49] 2025-12-09 15:30:40,923 | INFO     | traces error code: 0
[2025-12-09 07:30:49] 2025-12-09 15:30:40,923 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-09 07:30:49] 2025-12-09 15:30:48,997 | INFO     | PID=575808 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-09 07:30:49] 2025-12-09 15:30:48,997 | INFO     | .. there are 13 such processes running
[2025-12-09 07:30:49] 2025-12-09 15:30:48,998 | INFO     | found 0 job(s) in 20 queues
[2025-12-09 07:30:49] 2025-12-09 15:30:48,998 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-09 07:30:49] 2025-12-09 15:30:48,998 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-09 07:30:49] 2025-12-09 15:30:48,998 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-09 07:30:49] 2025-12-09 15:30:48,998 | INFO     | [monitor] control thread has ended
[2025-12-09 07:30:49] 2025-12-09 15:30:49,079 [wrapper] ==== pilot stdout END ====
[2025-12-09 07:30:49] 2025-12-09 15:30:49,083 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-09 07:30:49] 2025-12-09 15:30:49,085 [wrapper] pilotpid: 575808
[2025-12-09 07:30:49] 2025-12-09 15:30:49,087 [wrapper] Pilot exit status: 0
[2025-12-09 07:30:49] 2025-12-09 15:30:49,096 [wrapper] pandaids: 6896990104
[2025-12-09 07:30:49] 2025-12-09 15:30:49,152 [wrapper] cleanup supervisor_pilot 1851917 575809
[2025-12-09 07:30:49] 2025-12-09 15:30:49,154 [wrapper] Test setup, not cleaning
[2025-12-09 07:30:49] 2025-12-09 15:30:49,156 [wrapper] apfmon messages muted
[2025-12-09 07:30:49] 2025-12-09 15:30:49,158 [wrapper] ==== wrapper stdout END ====
[2025-12-09 07:30:49] 2025-12-09 15:30:49,160 [wrapper] ==== wrapper stderr END ====
[2025-12-09 07:30:49]  *** Error codes and diagnostics ***
[2025-12-09 07:30:49]     "exeErrorCode": 0,
[2025-12-09 07:30:49]     "exeErrorDiag": "",
[2025-12-09 07:30:49]     "pilotErrorCode": 0,
[2025-12-09 07:30:49]     "pilotErrorDiag": "",
[2025-12-09 07:30:49]  *** Listing of results directory ***
[2025-12-09 07:30:49] total 1328660
[2025-12-09 07:30:49] -rw-r--r-- 1 root root    576529 Nov 25 04:49 pilot3.tar.gz
[2025-12-09 07:30:49] -rwx------ 1 4871 1028     36292 Nov 25 05:24 runpilot2-wrapper.sh
[2025-12-09 07:30:49] -rw-r--r-- 1 root root      5112 Nov 25 05:24 queuedata.json
[2025-12-09 07:30:49] -rw-r--r-- 1 root root       100 Dec  8 15:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-09 07:30:49] -rwxr-xr-x 1 root root      7986 Dec  8 15:13 run_atlas
[2025-12-09 07:30:49] -rw-r--r-- 1 root root       105 Dec  8 15:13 job.xml
[2025-12-09 07:30:49] -rw-r--r-- 1 root root      7066 Dec  8 15:13 init_data.xml
[2025-12-09 07:30:49] -rw-r--r-- 2 root root 410611040 Dec  8 15:13 EVNT.47483658._002171.pool.root.1
[2025-12-09 07:30:49] drwxrwx--x 2 root root      4096 Dec  8 15:13 shared
[2025-12-09 07:30:49] -rw-r--r-- 2 root root    590102 Dec  8 15:13 input.tar.gz
[2025-12-09 07:30:49] -rw-r--r-- 2 root root     15847 Dec  8 15:13 start_atlas.sh
[2025-12-09 07:30:49] -rw-r--r-- 1 root root         0 Dec  8 15:13 boinc_lockfile
[2025-12-09 07:30:49] -rw-r--r-- 1 root root      2785 Dec  8 15:13 pandaJob.out
[2025-12-09 07:30:49] -rw------- 1 root root    981530 Dec  8 15:13 agis_schedconf.cvmfs.json
[2025-12-09 07:30:49] drwxr-xr-x 5  320  320      4096 Dec  8 15:13 pilot3
[2025-12-09 07:30:49] -rw-r--r-- 1 root root       533 Dec  9 07:21 boinc_task_state.xml
[2025-12-09 07:30:49] -rw------- 1 root root 924746580 Dec  9 07:29 HITS.47556161._001544.pool.root.1
[2025-12-09 07:30:49] -rw------- 1 root root      1050 Dec  9 07:30 memory_monitor_summary.json
[2025-12-09 07:30:49] -rw------- 1 root root   1516240 Dec  9 07:30 agis_ddmendpoints.agis.ALL.json
[2025-12-09 07:30:49] -rw------- 1 root root   2327887 Dec  9 07:30 log.47556161._001544.job.log.tgz.1
[2025-12-09 07:30:49] -rw------- 1 root root        95 Dec  9 07:30 pilot_heartbeat.json
[2025-12-09 07:30:49] -rw------- 1 root root      8602 Dec  9 07:30 heartbeat.json
[2025-12-09 07:30:49] -rw-r--r-- 1 root root      8192 Dec  9 07:30 boinc_mmap_file
[2025-12-09 07:30:49] -rw-r--r-- 1 root root        29 Dec  9 07:30 wrapper_checkpoint.txt
[2025-12-09 07:30:49] -rw------- 1 root root       822 Dec  9 07:30 pilotlog.txt
[2025-12-09 07:30:49] -rw------- 1 root root   8317379 Dec  9 07:30 log.47556161._001544.job.log.1
[2025-12-09 07:30:49] -rw------- 1 root root       353 Dec  9 07:30 output.list
[2025-12-09 07:30:49] -rw-r--r-- 1 root root       620 Dec  9 07:30 runtime_log
[2025-12-09 07:30:49] -rw------- 1 root root  10659840 Dec  9 07:30 result.tar.gz
[2025-12-09 07:30:49] -rw-r--r-- 1 root root      9021 Dec  9 07:30 runtime_log.err
[2025-12-09 07:30:49] -rw------- 1 root root       662 Dec  9 07:30 1BmMDmhC8h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmkOMKDm0cM0Ho.diag
[2025-12-09 07:30:49] -rw-r--r-- 1 root root     21412 Dec  9 07:30 stderr.txt
[2025-12-09 07:30:49] HITS file was successfully produced:
[2025-12-09 07:30:49] -rw------- 1 root root 924746580 Dec  9 07:29 shared/HITS.pool.root.1
[2025-12-09 07:30:49]  *** Contents of shared directory: ***
[2025-12-09 07:30:49] total 1315080
[2025-12-09 07:30:49] -rw-r--r-- 2 root root 410611040 Dec  8 15:13 ATLAS.root_0
[2025-12-09 07:30:49] -rw-r--r-- 2 root root    590102 Dec  8 15:13 input.tar.gz
[2025-12-09 07:30:49] -rw-r--r-- 2 root root     15847 Dec  8 15:13 start_atlas.sh
[2025-12-09 07:30:49] -rw------- 1 root root 924746580 Dec  9 07:29 HITS.pool.root.1
[2025-12-09 07:30:49] -rw------- 1 root root  10659840 Dec  9 07:30 result.tar.gz
07:30:50 (571951): run_atlas exited; CPU time 136715.049267
07:30:50 (571951): called boinc_finish(0)

</stderr_txt>
]]>

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