Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:40:26 (798009): wrapper (7.7.26015): starting
23:40:26 (798009): wrapper: running run_atlas (--nthreads 8)
[2025-12-02 23:40:26] Arguments: --nthreads 8
[2025-12-02 23:40:26] Threads: 8
[2025-12-02 23:40:26] Checking for CVMFS
[2025-12-02 23:40:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 23:40:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 23:40:27] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 23:40:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 23:40:28] 2.13.3.0 7314 39601 250304 153581 2 381 34739670 40960000 43051 16776704 0 596405051 99.748 381569034 48468 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-02 23:40:28] CVMFS is ok
[2025-12-02 23:40:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 23:40:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 23:40:28] Further information can be found at the LHC@home message board.
[2025-12-02 23:40:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 23:40:28] Checking for apptainer binary...
[2025-12-02 23:40:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 23:40:28] Running /usr/bin/apptainer --version
[2025-12-02 23:40:28] apptainer version 1.4.4-1.el9
[2025-12-02 23:40:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 23:40:29] c8-16-1.aglt2.org
[2025-12-02 23:40:29] apptainer works
[2025-12-02 23:40:29] Set ATHENA_PROC_NUMBER=8
[2025-12-02 23:40:29] Set ATHENA_CORE_NUMBER=8
[2025-12-02 23:40:29] Starting ATLAS job with PandaID=6905456799
[2025-12-02 23:40:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 09:30:12]  *** The last 200 lines of the pilot log: ***
[2025-12-03 09:30:12] 2025-12-03 14:29:39,415 | INFO     | chi2: 17.765991981062548
[2025-12-03 09:30:12] 2025-12-03 14:29:39,415 | INFO     | sum of square deviations: 57118834217.29035
[2025-12-03 09:30:12] 2025-12-03 14:29:39,419 | INFO     | sum of deviations: 1731753033370.023
[2025-12-03 09:30:12] 2025-12-03 14:29:39,419 | INFO     | mean x: 1764754478.8998241
[2025-12-03 09:30:12] 2025-12-03 14:29:39,419 | INFO     | mean y: 3299404.2284710016
[2025-12-03 09:30:12] 2025-12-03 14:29:39,419 | INFO     | intersect: -53501275117.75979
[2025-12-03 09:30:12] 2025-12-03 14:29:39,420 | INFO     | chi2: 16.443927269885904
[2025-12-03 09:30:12] 2025-12-03 14:29:39,420 | INFO     | current chi2=16.443927269885904 (change=7.441547382132578 %)
[2025-12-03 09:30:12] 2025-12-03 14:29:39,420 | INFO     | right removable region: 568
[2025-12-03 09:30:12] 2025-12-03 14:29:39,420 | INFO     | sum of square deviations: 57118208964.4887
[2025-12-03 09:30:12] 2025-12-03 14:29:39,424 | INFO     | sum of deviations: 1343747292644.1174
[2025-12-03 09:30:12] 2025-12-03 14:29:39,424 | INFO     | mean x: 1764754783.9015818
[2025-12-03 09:30:12] 2025-12-03 14:29:39,424 | INFO     | mean y: 3317364.0913884006
[2025-12-03 09:30:12] 2025-12-03 14:29:39,424 | INFO     | intersect: -41513818870.39441
[2025-12-03 09:30:12] 2025-12-03 14:29:39,425 | INFO     | chi2: 12.277341289174373
[2025-12-03 09:30:12] 2025-12-03 14:29:39,425 | INFO     | current chi2=12.277341289174373 (change=30.89414144585193 %)
[2025-12-03 09:30:12] 2025-12-03 14:29:39,425 | INFO     | sum of square deviations: 55625181181.248116
[2025-12-03 09:30:12] 2025-12-03 14:29:39,429 | INFO     | sum of deviations: 1083900657142.0995
[2025-12-03 09:30:12] 2025-12-03 14:29:39,429 | INFO     | mean x: 1764754936.4184396
[2025-12-03 09:30:12] 2025-12-03 14:29:39,429 | INFO     | mean y: 3343905.5673758867
[2025-12-03 09:30:12] 2025-12-03 14:29:39,429 | INFO     | intersect: -34384302024.89737
[2025-12-03 09:30:12] 2025-12-03 14:29:39,429 | INFO     | chi2: 7.91922526540578
[2025-12-03 09:30:12] 2025-12-03 14:29:39,429 | INFO     | current chi2=7.91922526540578 (change=35.497229580246255 %)
[2025-12-03 09:30:12] 2025-12-03 14:29:39,430 | INFO     | sum of square deviations: 54158386447.681595
[2025-12-03 09:30:12] 2025-12-03 14:29:39,434 | INFO     | sum of deviations: 844081862377.9409
[2025-12-03 09:30:12] 2025-12-03 14:29:39,434 | INFO     | mean x: 1764755088.9355993
[2025-12-03 09:30:12] 2025-12-03 14:29:39,434 | INFO     | mean y: 3368848.415026834
[2025-12-03 09:30:12] 2025-12-03 14:29:39,434 | INFO     | intersect: -27501102015.920998
[2025-12-03 09:30:12] 2025-12-03 14:29:39,434 | INFO     | chi2: 4.363123020952227
[2025-12-03 09:30:12] 2025-12-03 14:29:39,434 | INFO     | current chi2=4.363123020952227 (change=44.904673440569674 %)
[2025-12-03 09:30:12] 2025-12-03 14:29:39,434 | INFO     | sum of square deviations: 52717592201.27973
[2025-12-03 09:30:12] 2025-12-03 14:29:39,438 | INFO     | sum of deviations: 633268286542.8663
[2025-12-03 09:30:12] 2025-12-03 14:29:39,438 | INFO     | mean x: 1764755241.4530685
[2025-12-03 09:30:12] 2025-12-03 14:29:39,438 | INFO     | mean y: 3391147.725631769
[2025-12-03 09:30:12] 2025-12-03 14:29:39,438 | INFO     | intersect: -21195671276.362053
[2025-12-03 09:30:12] 2025-12-03 14:29:39,439 | INFO     | chi2: 1.6996561299367379
[2025-12-03 09:30:12] 2025-12-03 14:29:39,439 | INFO     | current chi2=1.6996561299367379 (change=61.04496431169164 %)
[2025-12-03 09:30:12] 2025-12-03 14:29:39,439 | INFO     | sum of square deviations: 51302633595.409996
[2025-12-03 09:30:12] 2025-12-03 14:29:39,443 | INFO     | sum of deviations: 575704983781.2139
[2025-12-03 09:30:12] 2025-12-03 14:29:39,443 | INFO     | mean x: 1764755393.9672132
[2025-12-03 09:30:12] 2025-12-03 14:29:39,443 | INFO     | mean y: 3397335.511839709
[2025-12-03 09:30:12] 2025-12-03 14:29:39,443 | INFO     | intersect: -19800234647.088814
[2025-12-03 09:30:12] 2025-12-03 14:29:39,443 | INFO     | chi2: 1.4774467174078068
[2025-12-03 09:30:12] 2025-12-03 14:29:39,443 | INFO     | current chi2=1.4774467174078068 (change=13.073786433330008 %)
[2025-12-03 09:30:12] 2025-12-03 14:29:39,444 | INFO     | left removable region: 50
[2025-12-03 09:30:12] 2025-12-03 14:29:39,444 | INFO     | sum of square deviations: 43092741789.43041
[2025-12-03 09:30:12] 2025-12-03 14:29:39,447 | INFO     | sum of deviations: 568193106984.4116
[2025-12-03 09:30:12] 2025-12-03 14:29:39,447 | INFO     | mean x: 1764755973.488417
[2025-12-03 09:30:12] 2025-12-03 14:29:39,447 | INFO     | mean y: 3422103.3185328185
[2025-12-03 09:30:12] 2025-12-03 14:29:39,447 | INFO     | intersect: -23265512246.354866
[2025-12-03 09:30:12] 2025-12-03 14:29:39,448 | INFO     | chi2: 0.009186908273114606
[2025-12-03 09:30:12] 2025-12-03 14:29:39,448 | INFO     | current memory leak: 13.19 B/s (using 518 data points, chi2=0.01)
[2025-12-03 09:30:12] 2025-12-03 14:29:39,448 | INFO     | could have reported an average CPU frequency of 3790 MHz (23 samples)
[2025-12-03 09:30:12] 2025-12-03 14:29:39,449 | INFO     | ..............................
[2025-12-03 09:30:12] 2025-12-03 14:29:39,449 | INFO     | . Timing measurements:
[2025-12-03 09:30:12] 2025-12-03 14:29:39,449 | INFO     | . get job = 0 s
[2025-12-03 09:30:12] 2025-12-03 14:29:39,449 | INFO     | . initial setup = 7 s
[2025-12-03 09:30:12] 2025-12-03 14:29:39,449 | INFO     | . payload setup = 110 s
[2025-12-03 09:30:12] 2025-12-03 14:29:39,449 | INFO     | . stage-in = 0 s
[2025-12-03 09:30:12] 2025-12-03 14:29:39,449 | INFO     | . payload execution = 35051 s
[2025-12-03 09:30:12] 2025-12-03 14:29:39,449 | INFO     | . stage-out = 2 s
[2025-12-03 09:30:12] 2025-12-03 14:29:39,449 | INFO     | . log creation = 0 s
[2025-12-03 09:30:12] 2025-12-03 14:29:39,449 | INFO     | ..............................
[2025-12-03 09:30:12] 2025-12-03 14:29:39,534 | INFO     | 
[2025-12-03 09:30:12] 2025-12-03 14:29:39,534 | INFO     | job summary report
[2025-12-03 09:30:12] 2025-12-03 14:29:39,535 | INFO     | --------------------------------------------------
[2025-12-03 09:30:12] 2025-12-03 14:29:39,535 | INFO     | PanDA job id: 6905456799
[2025-12-03 09:30:12] 2025-12-03 14:29:39,535 | INFO     | task id: 47530725
[2025-12-03 09:30:12] 2025-12-03 14:29:39,535 | INFO     | errors: (none)
[2025-12-03 09:30:12] 2025-12-03 14:29:39,535 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 09:30:12] 2025-12-03 14:29:39,535 | INFO     | pilot state: finished 
[2025-12-03 09:30:12] 2025-12-03 14:29:39,535 | INFO     | transexitcode: 0
[2025-12-03 09:30:12] 2025-12-03 14:29:39,535 | INFO     | exeerrorcode: 0
[2025-12-03 09:30:12] 2025-12-03 14:29:39,535 | INFO     | exeerrordiag: 
[2025-12-03 09:30:12] 2025-12-03 14:29:39,535 | INFO     | exitcode: 0
[2025-12-03 09:30:12] 2025-12-03 14:29:39,535 | INFO     | exitmsg: OK
[2025-12-03 09:30:12] 2025-12-03 14:29:39,535 | INFO     | cpuconsumptiontime: 120110 s
[2025-12-03 09:30:12] 2025-12-03 14:29:39,535 | INFO     | nevents: 1000
[2025-12-03 09:30:12] 2025-12-03 14:29:39,535 | INFO     | neventsw: 0
[2025-12-03 09:30:12] 2025-12-03 14:29:39,535 | INFO     | pid: 866219
[2025-12-03 09:30:12] 2025-12-03 14:29:39,535 | INFO     | pgrp: 866219
[2025-12-03 09:30:12] 2025-12-03 14:29:39,535 | INFO     | corecount: 8
[2025-12-03 09:30:12] 2025-12-03 14:29:39,535 | INFO     | event service: False
[2025-12-03 09:30:12] 2025-12-03 14:29:39,535 | INFO     | sizes: {0: 2283568, 3: 2284169, 4: 2284452, 15: 2284452, 26: 2284480, 36: 2284508, 38: 2284926, 49: 2284954, 35165: 2344895, 35168: 2353889, 35169: 2353945, 35175:
[2025-12-03 09:30:12] 2025-12-03 14:29:39,535 | INFO     | --------------------------------------------------
[2025-12-03 09:30:12] 2025-12-03 14:29:39,536 | INFO     | 
[2025-12-03 09:30:12] 2025-12-03 14:29:39,536 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-12-03 09:30:12] 2025-12-03 14:29:39,556 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 09:30:12] 2025-12-03 14:29:39,557 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 09:30:12] 2025-12-03 14:29:39,557 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 09:30:12] 2025-12-03 14:29:39,557 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 09:30:12] 2025-12-03 14:29:39,557 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 09:30:12] 2025-12-03 14:29:39,557 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 09:30:12] 2025-12-03 14:29:39,557 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 09:30:12] 2025-12-03 14:29:39,557 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 09:30:12] 2025-12-03 14:29:39,557 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 09:30:12] 2025-12-03 14:29:39,557 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 09:30:12] 2025-12-03 14:29:39,557 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 09:30:12] 2025-12-03 14:29:39,557 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 09:30:12] 2025-12-03 14:29:39,557 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 09:30:12] 2025-12-03 14:29:39,557 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 09:30:12] 2025-12-03 14:29:39,557 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 09:30:12] 2025-12-03 14:29:39,557 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 09:30:12] 2025-12-03 14:29:39,557 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 09:30:12] 2025-12-03 14:29:39,557 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 09:30:12] 2025-12-03 14:29:39,557 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 09:30:12] 2025-12-03 14:29:39,558 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 09:30:12] 2025-12-03 14:29:39,558 | INFO     | job 6905456799 has completed (purged errors)
[2025-12-03 09:30:12] 2025-12-03 14:29:39,558 | INFO     | overall cleanup function is called
[2025-12-03 09:30:12] 2025-12-03 14:29:40,574 | INFO     | --- collectZombieJob: --- 10, [866219]
[2025-12-03 09:30:12] 2025-12-03 14:29:40,576 | INFO     | zombie collector waiting for pid 866219
[2025-12-03 09:30:12] 2025-12-03 14:29:40,576 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 09:30:12] 2025-12-03 14:29:40,576 | INFO     | collected zombie processes
[2025-12-03 09:30:12] 2025-12-03 14:29:40,576 | INFO     | will attempt to kill all subprocesses of pid=866219
[2025-12-03 09:30:12] 2025-12-03 14:29:41,062 | INFO     | process IDs to be killed: [866219] (in reverse order)
[2025-12-03 09:30:12] 2025-12-03 14:29:41,216 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 09:30:12] 2025-12-03 14:29:41,216 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 09:30:12] 2025-12-03 14:29:41,243 | INFO     | did not find any defunct processes belonging to 866219
[2025-12-03 09:30:12] 2025-12-03 14:29:41,272 | INFO     | did not find any defunct processes belonging to 866219
[2025-12-03 09:30:12] 2025-12-03 14:29:41,273 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 09:30:12] 2025-12-03 14:29:41,273 | INFO     | ready for new job
[2025-12-03 09:30:12] 2025-12-03 14:29:41,273 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 09:30:12] 2025-12-03 14:29:41,276 | INFO     | ***************************************
[2025-12-03 09:30:12] 2025-12-03 14:29:41,276 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 09:30:12] 2025-12-03 14:29:41,276 | INFO     | ***************************************
[2025-12-03 09:30:12] 2025-12-03 14:29:41,276 | INFO     | 
[2025-12-03 09:30:12] 2025-12-03 14:29:41,280 | INFO     | architecture information:
[2025-12-03 09:30:12] 2025-12-03 14:29:41,281 | INFO     | executing command: cat /etc/os-release
[2025-12-03 09:30:12] 2025-12-03 14:29:41,297 | INFO     | cat /etc/os-release:
[2025-12-03 09:30:12] NAME="CentOS Linux"
[2025-12-03 09:30:12] VERSION="7 (Core)"
[2025-12-03 09:30:12] ID="centos"
[2025-12-03 09:30:12] ID_LIKE="rhel fedora"
[2025-12-03 09:30:12] VERSION_ID="7"
[2025-12-03 09:30:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 09:30:12] ANSI_COLOR="0;31"
[2025-12-03 09:30:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 09:30:12] HOME_URL="https://www.centos.org/"
[2025-12-03 09:30:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 09:30:12] 
[2025-12-03 09:30:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 09:30:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 09:30:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 09:30:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 09:30:12] 
[2025-12-03 09:30:12] 2025-12-03 14:29:41,297 | INFO     | ***************************************
[2025-12-03 09:30:12] 2025-12-03 14:29:41,799 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-12-03 09:30:12] 2025-12-03 14:29:41,818 | INFO     | sufficient remaining disk space (171250286592 B)
[2025-12-03 09:30:12] 2025-12-03 14:29:41,818 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 09:30:12] 2025-12-03 14:29:41,818 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 09:30:12] 2025-12-03 14:29:41,818 | INFO     | update_server=False
[2025-12-03 09:30:12] 2025-12-03 14:29:41,818 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 09:30:12] 2025-12-03 14:29:41,819 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 09:30:12] 2025-12-03 14:29:42,013 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 09:30:12] 2025-12-03 14:29:42,013 | INFO     | aborting loop
[2025-12-03 09:30:12] 2025-12-03 14:29:42,691 | INFO     | all data control threads have been joined
[2025-12-03 09:30:12] 2025-12-03 14:29:42,823 | INFO     | [job] retrieve thread has finished
[2025-12-03 09:30:12] 2025-12-03 14:29:43,019 | INFO     | [job] job monitor thread has finished
[2025-12-03 09:30:12] 2025-12-03 14:29:43,041 | INFO     | [job] validate thread has finished
[2025-12-03 09:30:12] 2025-12-03 14:29:43,042 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 09:30:12] 2025-12-03 14:29:43,093 | INFO     | all job control threads have been joined
[2025-12-03 09:30:12] 2025-12-03 14:29:43,171 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 09:30:12] 2025-12-03 14:29:43,295 | INFO     | all payload control threads have been joined
[2025-12-03 09:30:12] 2025-12-03 14:29:43,696 | INFO     | [data] control thread has finished
[2025-12-03 09:30:12] 2025-12-03 14:29:43,751 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 09:30:12] 2025-12-03 14:29:43,823 | INFO     | [data] copytool_out thread has finished
[2025-12-03 09:30:12] 2025-12-03 14:29:43,864 | INFO     | [payload] validate_post thread has finished
[2025-12-03 09:30:12] 2025-12-03 14:29:43,926 | INFO     | [data] copytool_in thread has finished
[2025-12-03 09:30:12] 2025-12-03 14:29:44,098 | INFO     | [job] control thread has finished
[2025-12-03 09:30:12] 2025-12-03 14:29:44,301 | INFO     | [payload] control thread has finished
[2025-12-03 09:30:12] 2025-12-03 14:29:44,346 | INFO     | [payload] failed_post thread has finished
[2025-12-03 09:30:12] 2025-12-03 14:29:44,517 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 09:30:12] 2025-12-03 14:29:44,623 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 09:30:12] 2025-12-03 14:29:45,523 | INFO     | [job] queue monitor thread has finished
[2025-12-03 09:30:12] 2025-12-03 14:29:48,629 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 09:30:12] 2025-12-03 14:29:52,393 | INFO     | job.realtimelogging is not enabled
[2025-12-03 09:30:12] 2025-12-03 14:29:53,399 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 09:30:12] 2025-12-03 14:29:57,134 | INFO     | [monitor] cgroup control has ended
[2025-12-03 09:30:12] 2025-12-03 14:29:58,528 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140452763506496)>', '<ExcThread(monitor, started 140452275681024)>']
[2025-12-03 09:30:12] 2025-12-03 14:30:03,553 | INFO     | all workflow threads have been joined
[2025-12-03 09:30:12] 2025-12-03 14:30:03,553 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 09:30:12] 2025-12-03 14:30:03,554 | INFO     | traces error code: 0
[2025-12-03 09:30:12] 2025-12-03 14:30:03,554 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 09:30:12] 2025-12-03 14:30:11,737 | INFO     | PID=809744 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-03 09:30:12] 2025-12-03 14:30:11,738 | INFO     | .. there are 40 such processes running
[2025-12-03 09:30:12] 2025-12-03 14:30:11,738 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 09:30:12] 2025-12-03 14:30:11,738 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 09:30:12] 2025-12-03 14:30:11,738 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 09:30:12] 2025-12-03 14:30:11,738 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 09:30:12] 2025-12-03 14:30:11,738 | INFO     | [monitor] control thread has ended
[2025-12-03 09:30:12] 2025-12-03 14:30:11,932 [wrapper] ==== pilot stdout END ====
[2025-12-03 09:30:12] 2025-12-03 14:30:11,935 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 09:30:12] 2025-12-03 14:30:11,938 [wrapper] pilotpid: 809744
[2025-12-03 09:30:12] 2025-12-03 14:30:11,941 [wrapper] Pilot exit status: 0
[2025-12-03 09:30:12] 2025-12-03 14:30:11,961 [wrapper] pandaids: 6905456799
[2025-12-03 09:30:12] 2025-12-03 14:30:12,068 [wrapper] cleanup supervisor_pilot   60342 809745
[2025-12-03 09:30:12] 2025-12-03 14:30:12,071 [wrapper] Test setup, not cleaning
[2025-12-03 09:30:12] 2025-12-03 14:30:12,074 [wrapper] apfmon messages muted
[2025-12-03 09:30:12] 2025-12-03 14:30:12,078 [wrapper] ==== wrapper stdout END ====
[2025-12-03 09:30:12] 2025-12-03 14:30:12,082 [wrapper] ==== wrapper stderr END ====
[2025-12-03 09:30:12]  *** Error codes and diagnostics ***
[2025-12-03 09:30:12]     "exeErrorCode": 0,
[2025-12-03 09:30:12]     "exeErrorDiag": "",
[2025-12-03 09:30:12]     "pilotErrorCode": 0,
[2025-12-03 09:30:12]     "pilotErrorDiag": "",
[2025-12-03 09:30:12]  *** Listing of results directory ***
[2025-12-03 09:30:12] total 1074816
[2025-12-03 09:30:12] -rw-r--r--. 1 boincer umatlas    576529 Nov 29 19:16 pilot3.tar.gz
[2025-12-03 09:30:12] -rwx------. 1 boincer umatlas     36292 Nov 29 19:18 runpilot2-wrapper.sh
[2025-12-03 09:30:12] -rw-r--r--. 1 boincer umatlas      5112 Nov 29 19:23 queuedata.json
[2025-12-03 09:30:12] -rw-r--r--. 1 boincer umatlas       100 Dec  2 23:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 09:30:12] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  2 23:40 run_atlas
[2025-12-03 09:30:12] -rw-r--r--. 1 boincer umatlas       105 Dec  2 23:40 job.xml
[2025-12-03 09:30:12] -rw-r--r--. 2 boincer umatlas 376966210 Dec  2 23:40 EVNT.47530720._000124.pool.root.1
[2025-12-03 09:30:12] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 23:40 start_atlas.sh
[2025-12-03 09:30:12] drwxrwx--x. 2 boincer umatlas      4096 Dec  2 23:40 shared
[2025-12-03 09:30:12] -rw-r--r--. 2 boincer umatlas    590134 Dec  2 23:40 input.tar.gz
[2025-12-03 09:30:12] -rw-r--r--. 1 boincer umatlas         0 Dec  2 23:40 boinc_lockfile
[2025-12-03 09:30:12] -rw-r--r--. 1 boincer umatlas      2876 Dec  2 23:40 pandaJob.out
[2025-12-03 09:30:12] -rw-------. 1 boincer umatlas        57 Dec  2 23:40 setup.sh.local
[2025-12-03 09:30:12] -rw-------. 1 boincer umatlas    989297 Dec  2 23:41 agis_schedconf.cvmfs.json
[2025-12-03 09:30:12] drwx------. 5 boincer umatlas      4096 Dec  2 23:41 pilot3
[2025-12-03 09:30:12] -rw-r--r--. 1 boincer umatlas       533 Dec  3 09:25 boinc_task_state.xml
[2025-12-03 09:30:12] -rw-r--r--. 1 boincer umatlas      7174 Dec  3 09:29 init_data.xml
[2025-12-03 09:30:12] -rw-------. 1 boincer umatlas 707156285 Dec  3 09:29 HITS.47530725._002631.pool.root.1
[2025-12-03 09:30:12] -rw-------. 1 boincer umatlas      1067 Dec  3 09:29 memory_monitor_summary.json
[2025-12-03 09:30:12] -rw-------. 1 boincer umatlas   1516240 Dec  3 09:29 agis_ddmendpoints.agis.ALL.json
[2025-12-03 09:30:12] -rw-------. 1 boincer umatlas        95 Dec  3 09:29 pilot_heartbeat.json
[2025-12-03 09:30:12] -rw-------. 1 boincer umatlas   1900889 Dec  3 09:29 log.47530725._002631.job.log.tgz.1
[2025-12-03 09:30:12] -rw-------. 1 boincer umatlas     27833 Dec  3 09:29 heartbeat.json
[2025-12-03 09:30:12] -rw-r--r--. 1 boincer umatlas        29 Dec  3 09:30 wrapper_checkpoint.txt
[2025-12-03 09:30:12] -rw-------. 1 boincer umatlas       822 Dec  3 09:30 pilotlog.txt
[2025-12-03 09:30:12] -rw-------. 1 boincer umatlas   4368360 Dec  3 09:30 log.47530725._002631.job.log.1
[2025-12-03 09:30:12] -rw-------. 1 boincer umatlas       353 Dec  3 09:30 output.list
[2025-12-03 09:30:12] -rw-r--r--. 1 boincer umatlas      8192 Dec  3 09:30 boinc_mmap_file
[2025-12-03 09:30:12] -rw-r--r--. 1 boincer umatlas       620 Dec  3 09:30 runtime_log
[2025-12-03 09:30:12] -rw-------. 1 boincer umatlas   6307840 Dec  3 09:30 result.tar.gz
[2025-12-03 09:30:12] -rw-r--r--. 1 boincer umatlas      9338 Dec  3 09:30 runtime_log.err
[2025-12-03 09:30:12] -rw-------. 1 boincer umatlas       664 Dec  3 09:30 iLoNDmAKkj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm02LKDmYGRvJn.diag
[2025-12-03 09:30:12] -rw-r--r--. 1 boincer umatlas     21176 Dec  3 09:30 stderr.txt
[2025-12-03 09:30:12] HITS file was successfully produced:
[2025-12-03 09:30:12] -rw-------. 1 boincer umatlas 707156285 Dec  3 09:29 shared/HITS.pool.root.1
[2025-12-03 09:30:12]  *** Contents of shared directory: ***
[2025-12-03 09:30:12] total 1065480
[2025-12-03 09:30:12] -rw-r--r--. 2 boincer umatlas 376966210 Dec  2 23:40 ATLAS.root_0
[2025-12-03 09:30:12] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 23:40 start_atlas.sh
[2025-12-03 09:30:12] -rw-r--r--. 2 boincer umatlas    590134 Dec  2 23:40 input.tar.gz
[2025-12-03 09:30:12] -rw-------. 1 boincer umatlas 707156285 Dec  3 09:29 HITS.pool.root.1
[2025-12-03 09:30:12] -rw-------. 1 boincer umatlas   6307840 Dec  3 09:30 result.tar.gz
09:30:13 (798009): run_atlas exited; CPU time 120422.027334
09:30:13 (798009): called boinc_finish(0)

</stderr_txt>
]]>

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