Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
11:45:27 (308683): wrapper (7.7.26015): starting
11:45:27 (308683): wrapper: running run_atlas (--nthreads 10)
[2025-12-08 11:45:27] Arguments: --nthreads 10
[2025-12-08 11:45:27] Threads: 10
[2025-12-08 11:45:27] Checking for CVMFS
[2025-12-08 11:45:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-08 11:45:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-08 11:45:27] Running cvmfs_config stat atlas.cern.ch
[2025-12-08 11:45:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-08 11:45:27] 2.13.3.0 11319 3161 81764 153778 0 90 2370381 4096000 12348 130560 0 459701613 100.000 189090 637 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-12-08 11:45:27] CVMFS is ok
[2025-12-08 11:45:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-08 11:45:27] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-08 11:45:27] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-08 11:45:27] Further information can be found at the LHC@home message board.
[2025-12-08 11:45:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-08 11:45:27] Checking for apptainer binary...
[2025-12-08 11:45:27] apptainer is not installed, using version from CVMFS
[2025-12-08 11:45:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-08 11:45:28] 7950x-linux
[2025-12-08 11:45:28] apptainer works
[2025-12-08 11:45:28] Set ATHENA_PROC_NUMBER=10
[2025-12-08 11:45:28] Set ATHENA_CORE_NUMBER=10
[2025-12-08 11:45:28] Starting ATLAS job with PandaID=6895355359
[2025-12-08 11:45:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc538/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-09 04:28:26]  *** The last 200 lines of the pilot log: ***
[2025-12-09 04:28:26] 2025-12-09 12:27:37,095 | INFO     | monitor loop #4360: job 0:6895355359 is in state 'finished'
[2025-12-09 04:28:26] 2025-12-09 12:27:37,095 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-09 04:28:26] 2025-12-09 12:27:37,819 | INFO     | time since job start (60116s) is within the limit (172800.0s)
[2025-12-09 04:28:26] 2025-12-09 12:27:38,044 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-09 04:28:26] 2025-12-09 12:27:38,047 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3999.9844687499995
[2025-12-09 04:28:26] 2025-12-09 12:27:38,051 | INFO     | using path: /var/lib/multiboinc/boinc538/slots/3/PanDA_Pilot-6895355359/memory_monitor_summary.json (trf name=prmon)
[2025-12-09 04:28:26] 2025-12-09 12:27:38,051 | INFO     | extracted standard info from prmon json
[2025-12-09 04:28:26] 2025-12-09 12:27:38,051 | INFO     | extracted standard memory fields from prmon json
[2025-12-09 04:28:26] 2025-12-09 12:27:38,051 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-09 04:28:26] 2025-12-09 12:27:38,059 | INFO     | fitting pss+swap vs Time
[2025-12-09 04:28:26] 2025-12-09 12:27:38,060 | INFO     | sum of square deviations: 296337537620.0
[2025-12-09 04:28:26] 2025-12-09 12:27:38,071 | INFO     | sum of deviations: 2265847301591.0005
[2025-12-09 04:28:26] 2025-12-09 12:27:38,071 | INFO     | mean x: 1765253182.0
[2025-12-09 04:28:26] 2025-12-09 12:27:38,071 | INFO     | mean y: 3155654.0131979696
[2025-12-09 04:28:26] 2025-12-09 12:27:38,071 | INFO     | intersect: -13494270933.19375
[2025-12-09 04:28:26] 2025-12-09 12:27:38,071 | INFO     | chi2: 4.0864043258232305
[2025-12-09 04:28:26] 2025-12-09 12:27:38,072 | INFO     | sum of square deviations: 291847648785.0
[2025-12-09 04:28:26] 2025-12-09 12:27:38,082 | INFO     | sum of deviations: 2527628318562.5
[2025-12-09 04:28:26] 2025-12-09 12:27:38,083 | INFO     | mean x: 1765253029.5
[2025-12-09 04:28:26] 2025-12-09 12:27:38,083 | INFO     | mean y: 3164536.9397959183
[2025-12-09 04:28:26] 2025-12-09 12:27:38,083 | INFO     | intersect: -15285303831.29251
[2025-12-09 04:28:26] 2025-12-09 12:27:38,083 | INFO     | chi2: 2.187395905337161
[2025-12-09 04:28:26] 2025-12-09 12:27:38,083 | INFO     | current chi2=2.187395905337161 (change=46.47137848023648 %)
[2025-12-09 04:28:26] 2025-12-09 12:27:38,084 | INFO     | sum of square deviations: 287403342200.0
[2025-12-09 04:28:26] 2025-12-09 12:27:38,094 | INFO     | sum of deviations: 2517076235057.0005
[2025-12-09 04:28:26] 2025-12-09 12:27:38,094 | INFO     | mean x: 1765252877.0
[2025-12-09 04:28:26] 2025-12-09 12:27:38,094 | INFO     | mean y: 3164173.7333333334
[2025-12-09 04:28:26] 2025-12-09 12:27:38,094 | INFO     | intersect: -15456906789.779278
[2025-12-09 04:28:26] 2025-12-09 12:27:38,095 | INFO     | chi2: 2.1697246626926288
[2025-12-09 04:28:26] 2025-12-09 12:27:38,099 | INFO     | current chi2=2.1697246626926288 (change=0.8078666784286882 %)
[2025-12-09 04:28:26] 2025-12-09 12:27:38,099 | INFO     | right removable region: 974
[2025-12-09 04:28:26] 2025-12-09 12:27:38,099 | INFO     | sum of square deviations: 291847648785.0
[2025-12-09 04:28:26] 2025-12-09 12:27:38,110 | INFO     | sum of deviations: 2001480174857.499
[2025-12-09 04:28:26] 2025-12-09 12:27:38,110 | INFO     | mean x: 1765253334.5
[2025-12-09 04:28:26] 2025-12-09 12:27:38,110 | INFO     | mean y: 3164619.8908163267
[2025-12-09 04:28:26] 2025-12-09 12:27:38,110 | INFO     | intersect: -12102876211.041634
[2025-12-09 04:28:26] 2025-12-09 12:27:38,111 | INFO     | chi2: 2.2022511671342264
[2025-12-09 04:28:26] 2025-12-09 12:27:38,111 | INFO     | current chi2=2.2022511671342264 (change=46.107849553272736 %)
[2025-12-09 04:28:26] 2025-12-09 12:27:38,111 | INFO     | sum of square deviations: 287403342200.0
[2025-12-09 04:28:26] 2025-12-09 12:27:38,122 | INFO     | sum of deviations: 1907531430538.0002
[2025-12-09 04:28:26] 2025-12-09 12:27:38,122 | INFO     | mean x: 1765253487.0
[2025-12-09 04:28:26] 2025-12-09 12:27:38,122 | INFO     | mean y: 3167843.0553846154
[2025-12-09 04:28:26] 2025-12-09 12:27:38,122 | INFO     | intersect: -11713037276.702974
[2025-12-09 04:28:26] 2025-12-09 12:27:38,122 | INFO     | chi2: 2.1035564250217096
[2025-12-09 04:28:26] 2025-12-09 12:27:38,122 | INFO     | current chi2=2.1035564250217096 (change=4.481538871923841 %)
[2025-12-09 04:28:26] 2025-12-09 12:27:38,123 | INFO     | left removable region: 20
[2025-12-09 04:28:26] 2025-12-09 12:27:38,123 | INFO     | sum of square deviations: 269229764242.5
[2025-12-09 04:28:26] 2025-12-09 12:27:38,133 | INFO     | sum of deviations: 2027462172250.9998
[2025-12-09 04:28:26] 2025-12-09 12:27:38,133 | INFO     | mean x: 1765253456.5
[2025-12-09 04:28:26] 2025-12-09 12:27:38,133 | INFO     | mean y: 3180938.5492662475
[2025-12-09 04:28:26] 2025-12-09 12:27:38,133 | INFO     | intersect: -13290240082.55827
[2025-12-09 04:28:26] 2025-12-09 12:27:38,134 | INFO     | chi2: 0.12940174487874898
[2025-12-09 04:28:26] 2025-12-09 12:27:38,134 | INFO     | current memory leak: 7.53 B/s (using 954 data points, chi2=0.13)
[2025-12-09 04:28:26] 2025-12-09 12:27:38,135 | INFO     | could have reported an average CPU frequency of 3999 MHz (37 samples)
[2025-12-09 04:28:26] 2025-12-09 12:27:38,135 | INFO     | ..............................
[2025-12-09 04:28:26] 2025-12-09 12:27:38,135 | INFO     | . Timing measurements:
[2025-12-09 04:28:26] 2025-12-09 12:27:38,135 | INFO     | . get job = 0 s
[2025-12-09 04:28:26] 2025-12-09 12:27:38,135 | INFO     | . initial setup = 3 s
[2025-12-09 04:28:26] 2025-12-09 12:27:38,135 | INFO     | . payload setup = 6 s
[2025-12-09 04:28:26] 2025-12-09 12:27:38,135 | INFO     | . stage-in = 0 s
[2025-12-09 04:28:26] 2025-12-09 12:27:38,135 | INFO     | . payload execution = 60076 s
[2025-12-09 04:28:26] 2025-12-09 12:27:38,135 | INFO     | . stage-out = 3 s
[2025-12-09 04:28:26] 2025-12-09 12:27:38,135 | INFO     | . log creation = 0 s
[2025-12-09 04:28:26] 2025-12-09 12:27:38,135 | INFO     | ..............................
[2025-12-09 04:28:26] 2025-12-09 12:27:38,479 | INFO     | 
[2025-12-09 04:28:26] 2025-12-09 12:27:38,479 | INFO     | job summary report
[2025-12-09 04:28:26] 2025-12-09 12:27:38,479 | INFO     | --------------------------------------------------
[2025-12-09 04:28:26] 2025-12-09 12:27:38,479 | INFO     | PanDA job id: 6895355359
[2025-12-09 04:28:26] 2025-12-09 12:27:38,479 | INFO     | task id: 47556137
[2025-12-09 04:28:26] 2025-12-09 12:27:38,479 | INFO     | errors: (none)
[2025-12-09 04:28:26] 2025-12-09 12:27:38,479 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-09 04:28:26] 2025-12-09 12:27:38,479 | INFO     | pilot state: finished 
[2025-12-09 04:28:26] 2025-12-09 12:27:38,479 | INFO     | transexitcode: 0
[2025-12-09 04:28:26] 2025-12-09 12:27:38,479 | INFO     | exeerrorcode: 0
[2025-12-09 04:28:26] 2025-12-09 12:27:38,479 | INFO     | exeerrordiag: 
[2025-12-09 04:28:26] 2025-12-09 12:27:38,479 | INFO     | exitcode: 0
[2025-12-09 04:28:26] 2025-12-09 12:27:38,479 | INFO     | exitmsg: OK
[2025-12-09 04:28:26] 2025-12-09 12:27:38,479 | INFO     | cpuconsumptiontime: 136932 s
[2025-12-09 04:28:26] 2025-12-09 12:27:38,479 | INFO     | nevents: 1000
[2025-12-09 04:28:26] 2025-12-09 12:27:38,479 | INFO     | neventsw: 0
[2025-12-09 04:28:26] 2025-12-09 12:27:38,479 | INFO     | pid: 319261
[2025-12-09 04:28:26] 2025-12-09 12:27:38,479 | INFO     | pgrp: 319261
[2025-12-09 04:28:26] 2025-12-09 12:27:38,479 | INFO     | corecount: 10
[2025-12-09 04:28:26] 2025-12-09 12:27:38,479 | INFO     | event service: False
[2025-12-09 04:28:26] 2025-12-09 12:27:38,479 | INFO     | sizes: {0: 2284328, 1: 2284328, 6: 2284618, 11: 2284646, 60086: 2337266, 60087: 2337265, 60090: 2346471, 60093: 2346527, 60101: 2346773}
[2025-12-09 04:28:26] 2025-12-09 12:27:38,479 | INFO     | --------------------------------------------------
[2025-12-09 04:28:26] 2025-12-09 12:27:38,480 | INFO     | 
[2025-12-09 04:28:26] 2025-12-09 12:27:38,480 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc538/slots/3
[2025-12-09 04:28:26] 2025-12-09 12:27:38,507 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-09 04:28:26] 2025-12-09 12:27:38,508 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-09 04:28:26] 2025-12-09 12:27:38,508 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-09 04:28:26] 2025-12-09 12:27:38,508 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-09 04:28:26] 2025-12-09 12:27:38,508 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-09 04:28:26] 2025-12-09 12:27:38,508 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-09 04:28:26] 2025-12-09 12:27:38,508 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-09 04:28:26] 2025-12-09 12:27:38,508 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-09 04:28:26] 2025-12-09 12:27:38,508 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-09 04:28:26] 2025-12-09 12:27:38,508 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-09 04:28:26] 2025-12-09 12:27:38,508 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-09 04:28:26] 2025-12-09 12:27:38,508 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-09 04:28:26] 2025-12-09 12:27:38,508 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-09 04:28:26] 2025-12-09 12:27:38,508 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-09 04:28:26] 2025-12-09 12:27:38,508 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-09 04:28:26] 2025-12-09 12:27:38,508 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-09 04:28:26] 2025-12-09 12:27:38,508 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-09 04:28:26] 2025-12-09 12:27:38,508 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-09 04:28:26] 2025-12-09 12:27:38,508 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-09 04:28:26] 2025-12-09 12:27:38,508 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-09 04:28:26] 2025-12-09 12:27:38,508 | INFO     | job 6895355359 has completed (purged errors)
[2025-12-09 04:28:26] 2025-12-09 12:27:38,508 | INFO     | overall cleanup function is called
[2025-12-09 04:28:26] 2025-12-09 12:27:39,522 | INFO     | --- collectZombieJob: --- 10, [319261]
[2025-12-09 04:28:26] 2025-12-09 12:27:39,522 | INFO     | zombie collector waiting for pid 319261
[2025-12-09 04:28:26] 2025-12-09 12:27:39,522 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-09 04:28:26] 2025-12-09 12:27:39,522 | INFO     | collected zombie processes
[2025-12-09 04:28:26] 2025-12-09 12:27:39,522 | INFO     | will attempt to kill all subprocesses of pid=319261
[2025-12-09 04:28:26] 2025-12-09 12:27:39,878 | INFO     | process IDs to be killed: [319261] (in reverse order)
[2025-12-09 04:28:26] 2025-12-09 12:27:40,007 | WARNING  | found no corresponding commands to process id(s)
[2025-12-09 04:28:26] 2025-12-09 12:27:40,007 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-09 04:28:26] 2025-12-09 12:27:40,012 | INFO     | did not find any defunct processes belonging to 319261
[2025-12-09 04:28:26] 2025-12-09 12:27:40,021 | INFO     | did not find any defunct processes belonging to 319261
[2025-12-09 04:28:26] 2025-12-09 12:27:40,022 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-09 04:28:26] 2025-12-09 12:27:40,022 | INFO     | ready for new job
[2025-12-09 04:28:26] 2025-12-09 12:27:40,022 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-09 04:28:26] 2025-12-09 12:27:40,026 | INFO     | ***************************************
[2025-12-09 04:28:26] 2025-12-09 12:27:40,027 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-09 04:28:26] 2025-12-09 12:27:40,027 | INFO     | ***************************************
[2025-12-09 04:28:26] 2025-12-09 12:27:40,027 | INFO     | 
[2025-12-09 04:28:26] 2025-12-09 12:27:40,028 | INFO     | architecture information:
[2025-12-09 04:28:26] 2025-12-09 12:27:40,029 | INFO     | executing command: cat /etc/os-release
[2025-12-09 04:28:26] 2025-12-09 12:27:40,049 | INFO     | cat /etc/os-release:
[2025-12-09 04:28:26] NAME="CentOS Linux"
[2025-12-09 04:28:26] VERSION="7 (Core)"
[2025-12-09 04:28:26] ID="centos"
[2025-12-09 04:28:26] ID_LIKE="rhel fedora"
[2025-12-09 04:28:26] VERSION_ID="7"
[2025-12-09 04:28:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-09 04:28:26] ANSI_COLOR="0;31"
[2025-12-09 04:28:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-09 04:28:26] HOME_URL="https://www.centos.org/"
[2025-12-09 04:28:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-09 04:28:26] 
[2025-12-09 04:28:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-09 04:28:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-09 04:28:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-09 04:28:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-09 04:28:26] 
[2025-12-09 04:28:26] 2025-12-09 12:27:40,049 | INFO     | ***************************************
[2025-12-09 04:28:26] 2025-12-09 12:27:40,554 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc538/slots/3
[2025-12-09 04:28:26] 2025-12-09 12:27:40,583 | INFO     | sufficient remaining disk space (185051643904 B)
[2025-12-09 04:28:26] 2025-12-09 12:27:40,583 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-09 04:28:26] 2025-12-09 12:27:40,583 | INFO     | current server update state: UPDATING_FINAL
[2025-12-09 04:28:26] 2025-12-09 12:27:40,583 | INFO     | update_server=False
[2025-12-09 04:28:26] 2025-12-09 12:27:40,583 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-09 04:28:26] 2025-12-09 12:27:40,606 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-09 04:28:26] 2025-12-09 12:27:40,606 | INFO     | aborting loop
[2025-12-09 04:28:26] 2025-12-09 12:27:40,941 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-09 04:28:26] 2025-12-09 12:27:40,968 | INFO     | all data control threads have been joined
[2025-12-09 04:28:26] 2025-12-09 12:27:41,251 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-09 04:28:26] 2025-12-09 12:27:41,474 | INFO     | all payload control threads have been joined
[2025-12-09 04:28:26] 2025-12-09 12:27:41,588 | INFO     | [job] retrieve thread has finished
[2025-12-09 04:28:26] 2025-12-09 12:27:41,592 | INFO     | all job control threads have been joined
[2025-12-09 04:28:26] 2025-12-09 12:27:41,611 | INFO     | [job] job monitor thread has finished
[2025-12-09 04:28:26] 2025-12-09 12:27:41,821 | INFO     | [job] validate thread has finished
[2025-12-09 04:28:26] 2025-12-09 12:27:41,947 | INFO     | [job] create_data_payload thread has finished
[2025-12-09 04:28:26] 2025-12-09 12:27:41,973 | INFO     | [data] control thread has finished
[2025-12-09 04:28:26] 2025-12-09 12:27:42,450 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-09 04:28:26] 2025-12-09 12:27:42,479 | INFO     | [payload] control thread has finished
[2025-12-09 04:28:26] 2025-12-09 12:27:42,486 | INFO     | [payload] validate_pre thread has finished
[2025-12-09 04:28:26] 2025-12-09 12:27:42,550 | INFO     | [payload] failed_post thread has finished
[2025-12-09 04:28:26] 2025-12-09 12:27:42,597 | INFO     | [job] control thread has finished
[2025-12-09 04:28:26] 2025-12-09 12:27:42,674 | INFO     | [data] copytool_in thread has finished
[2025-12-09 04:28:26] 2025-12-09 12:27:42,916 | INFO     | [payload] validate_post thread has finished
[2025-12-09 04:28:26] 2025-12-09 12:27:42,946 | INFO     | [data] copytool_out thread has finished
[2025-12-09 04:28:26] 2025-12-09 12:27:43,015 | INFO     | [payload] execute_payloads thread has finished
[2025-12-09 04:28:26] 2025-12-09 12:27:43,210 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-09 04:28:26] 2025-12-09 12:27:44,215 | INFO     | [job] queue monitor thread has finished
[2025-12-09 04:28:26] 2025-12-09 12:27:45,257 | INFO     | [data] queue_monitor thread has finished
[2025-12-09 04:28:26] 2025-12-09 12:28:11,150 | INFO     | PID=312551 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-09 04:28:26] 2025-12-09 12:28:11,150 | INFO     | .. there are 13 such processes running
[2025-12-09 04:28:26] 2025-12-09 12:28:11,150 | INFO     | found 0 job(s) in 20 queues
[2025-12-09 04:28:26] 2025-12-09 12:28:11,150 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-09 04:28:26] 2025-12-09 12:28:11,150 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-09 04:28:26] 2025-12-09 12:28:21,318 | INFO     | [monitor] cgroup control has ended
[2025-12-09 04:28:26] 2025-12-09 12:28:21,379 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139881562285888)>', '<ExcThread(monitor, started 139880692700928)>']
[2025-12-09 04:28:26] 2025-12-09 12:28:22,205 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-09 04:28:26] 2025-12-09 12:28:22,205 | INFO     | [monitor] control thread has ended
[2025-12-09 04:28:26] 2025-12-09 12:28:26,404 | INFO     | all workflow threads have been joined
[2025-12-09 04:28:26] 2025-12-09 12:28:26,404 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-09 04:28:26] 2025-12-09 12:28:26,404 | INFO     | traces error code: 0
[2025-12-09 04:28:26] 2025-12-09 12:28:26,404 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-09 04:28:26] 2025-12-09 12:28:26,506 [wrapper] ==== pilot stdout END ====
[2025-12-09 04:28:26] 2025-12-09 12:28:26,510 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-09 04:28:26] 2025-12-09 12:28:26,512 [wrapper] pilotpid: 312551
[2025-12-09 04:28:26] 2025-12-09 12:28:26,514 [wrapper] Pilot exit status: 0
[2025-12-09 04:28:26] 2025-12-09 12:28:26,529 [wrapper] pandaids: 6895355359
[2025-12-09 04:28:26] 2025-12-09 12:28:26,585 [wrapper] cleanup supervisor_pilot 1619012 312552
[2025-12-09 04:28:26] 2025-12-09 12:28:26,587 [wrapper] Test setup, not cleaning
[2025-12-09 04:28:26] 2025-12-09 12:28:26,589 [wrapper] apfmon messages muted
[2025-12-09 04:28:26] 2025-12-09 12:28:26,591 [wrapper] ==== wrapper stdout END ====
[2025-12-09 04:28:26] 2025-12-09 12:28:26,593 [wrapper] ==== wrapper stderr END ====
[2025-12-09 04:28:26]  *** Error codes and diagnostics ***
[2025-12-09 04:28:26]     "exeErrorCode": 0,
[2025-12-09 04:28:26]     "exeErrorDiag": "",
[2025-12-09 04:28:26]     "pilotErrorCode": 0,
[2025-12-09 04:28:26]     "pilotErrorDiag": "",
[2025-12-09 04:28:26]  *** Listing of results directory ***
[2025-12-09 04:28:26] total 1330548
[2025-12-09 04:28:26] -rw-r--r-- 1 root root    576529 Nov 22 22:48 pilot3.tar.gz
[2025-12-09 04:28:26] -rwx------ 1 4871 1028     36292 Nov 22 23:22 runpilot2-wrapper.sh
[2025-12-09 04:28:26] -rw-r--r-- 1 root root      5112 Nov 22 23:22 queuedata.json
[2025-12-09 04:28:26] -rw-r--r-- 1 root root       100 Dec  8 11:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-09 04:28:26] -rwxr-xr-x 1 root root      7986 Dec  8 11:45 run_atlas
[2025-12-09 04:28:26] -rw-r--r-- 1 root root       105 Dec  8 11:45 job.xml
[2025-12-09 04:28:26] -rw-r--r-- 1 root root      7066 Dec  8 11:45 init_data.xml
[2025-12-09 04:28:26] -rw-r--r-- 2 root root 409143997 Dec  8 11:45 EVNT.47483658._000657.pool.root.1
[2025-12-09 04:28:26] -rw-r--r-- 2 root root     15847 Dec  8 11:45 start_atlas.sh
[2025-12-09 04:28:26] drwxrwx--x 2 root root      4096 Dec  8 11:45 shared
[2025-12-09 04:28:26] -rw-r--r-- 2 root root    590100 Dec  8 11:45 input.tar.gz
[2025-12-09 04:28:26] -rw-r--r-- 1 root root         0 Dec  8 11:45 boinc_lockfile
[2025-12-09 04:28:26] -rw-r--r-- 1 root root      2785 Dec  8 11:45 pandaJob.out
[2025-12-09 04:28:26] -rw------- 1 root root    981538 Dec  8 11:45 agis_schedconf.cvmfs.json
[2025-12-09 04:28:26] drwxr-xr-x 5  320  320      4096 Dec  8 11:45 pilot3
[2025-12-09 04:28:26] -rw-r--r-- 1 root root       533 Dec  9 04:19 boinc_task_state.xml
[2025-12-09 04:28:26] -rw------- 1 root root 927635327 Dec  9 04:27 HITS.47556137._006525.pool.root.1
[2025-12-09 04:28:26] -rw------- 1 root root      1050 Dec  9 04:27 memory_monitor_summary.json
[2025-12-09 04:28:26] -rw------- 1 root root   1516240 Dec  9 04:27 agis_ddmendpoints.agis.ALL.json
[2025-12-09 04:28:26] -rw------- 1 root root   2350133 Dec  9 04:27 log.47556137._006525.job.log.tgz.1
[2025-12-09 04:28:26] -rw------- 1 root root        95 Dec  9 04:27 pilot_heartbeat.json
[2025-12-09 04:28:26] -rw------- 1 root root      8599 Dec  9 04:27 heartbeat.json
[2025-12-09 04:28:26] -rw-r--r-- 1 root root      8192 Dec  9 04:28 boinc_mmap_file
[2025-12-09 04:28:26] -rw-r--r-- 1 root root        29 Dec  9 04:28 wrapper_checkpoint.txt
[2025-12-09 04:28:26] -rw------- 1 root root      4838 Dec  9 04:28 pilotlog.txt
[2025-12-09 04:28:26] -rw------- 1 root root   8549132 Dec  9 04:28 log.47556137._006525.job.log.1
[2025-12-09 04:28:26] -rw------- 1 root root       353 Dec  9 04:28 output.list
[2025-12-09 04:28:26] -rw-r--r-- 1 root root       620 Dec  9 04:28 runtime_log
[2025-12-09 04:28:26] -rw------- 1 root root  10915840 Dec  9 04:28 result.tar.gz
[2025-12-09 04:28:26] -rw------- 1 root root       662 Dec  9 04:28 yYAODmYbJh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmOTIKDm5M7ivm.diag
[2025-12-09 04:28:26] -rw-r--r-- 1 root root      9021 Dec  9 04:28 runtime_log.err
[2025-12-09 04:28:26] -rw-r--r-- 1 root root     21435 Dec  9 04:28 stderr.txt
[2025-12-09 04:28:26] HITS file was successfully produced:
[2025-12-09 04:28:26] -rw------- 1 root root 927635327 Dec  9 04:27 shared/HITS.pool.root.1
[2025-12-09 04:28:26]  *** Contents of shared directory: ***
[2025-12-09 04:28:26] total 1316716
[2025-12-09 04:28:26] -rw-r--r-- 2 root root 409143997 Dec  8 11:45 ATLAS.root_0
[2025-12-09 04:28:26] -rw-r--r-- 2 root root     15847 Dec  8 11:45 start_atlas.sh
[2025-12-09 04:28:26] -rw-r--r-- 2 root root    590100 Dec  8 11:45 input.tar.gz
[2025-12-09 04:28:26] -rw------- 1 root root 927635327 Dec  9 04:27 HITS.pool.root.1
[2025-12-09 04:28:26] -rw------- 1 root root  10915840 Dec  9 04:28 result.tar.gz
04:28:28 (308683): run_atlas exited; CPU time 137204.089266
04:28:28 (308683): called boinc_finish(0)

</stderr_txt>
]]>

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