Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
17:15:55 (2688428): wrapper (7.7.26015): starting
17:15:55 (2688428): wrapper: running run_atlas (--nthreads 10)
[2025-12-09 17:15:55] Arguments: --nthreads 10
[2025-12-09 17:15:55] Threads: 10
[2025-12-09 17:15:55] Checking for CVMFS
[2025-12-09 17:15:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-09 17:15:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-09 17:15:56] Running cvmfs_config stat atlas.cern.ch
[2025-12-09 17:15:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-09 17:15:56] 2.13.3.0 11319 4932 72328 153823 0 82 3640506 4096001 13771 130560 0 723434511 99.999 534017 498 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-12-09 17:15:56] CVMFS is ok
[2025-12-09 17:15:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-09 17:15:56] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-09 17:15:56] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-09 17:15:56] Further information can be found at the LHC@home message board.
[2025-12-09 17:15:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-09 17:15:56] Checking for apptainer binary...
[2025-12-09 17:15:56] apptainer is not installed, using version from CVMFS
[2025-12-09 17:15:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-09 17:15:56] 7950x-linux
[2025-12-09 17:15:56] apptainer works
[2025-12-09 17:15:56] Set ATHENA_PROC_NUMBER=10
[2025-12-09 17:15:56] Set ATHENA_CORE_NUMBER=10
[2025-12-09 17:15:56] Starting ATLAS job with PandaID=6895381220
[2025-12-09 17:15:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc538/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-10 09:55:59]  *** The last 200 lines of the pilot log: ***
[2025-12-10 09:55:59] 2025-12-10 17:54:58,845 | INFO     | time since job start (59925s) is within the limit (172800.0s)
[2025-12-10 09:55:59] 2025-12-10 17:54:58,975 | INFO     | monitor loop #4332: job 0:6895381220 is in state 'finished'
[2025-12-10 09:55:59] 2025-12-10 17:54:58,975 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-10 09:55:59] 2025-12-10 17:54:59,579 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-10 09:55:59] 2025-12-10 17:54:59,582 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3999.988125
[2025-12-10 09:55:59] 2025-12-10 17:54:59,585 | INFO     | using path: /var/lib/multiboinc/boinc538/slots/4/PanDA_Pilot-6895381220/memory_monitor_summary.json (trf name=prmon)
[2025-12-10 09:55:59] 2025-12-10 17:54:59,586 | INFO     | extracted standard info from prmon json
[2025-12-10 09:55:59] 2025-12-10 17:54:59,586 | INFO     | extracted standard memory fields from prmon json
[2025-12-10 09:55:59] 2025-12-10 17:54:59,586 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-10 09:55:59] 2025-12-10 17:54:59,595 | INFO     | fitting pss+swap vs Time
[2025-12-10 09:55:59] 2025-12-10 17:54:59,596 | INFO     | sum of square deviations: 293638121425.5
[2025-12-10 09:55:59] 2025-12-10 17:54:59,607 | INFO     | sum of deviations: 2240619650205.5
[2025-12-10 09:55:59] 2025-12-10 17:54:59,607 | INFO     | mean x: 1765359325.5
[2025-12-10 09:55:59] 2025-12-10 17:54:59,607 | INFO     | mean y: 3154759.7953156824
[2025-12-10 09:55:59] 2025-12-10 17:54:59,608 | INFO     | intersect: -13467503529.34781
[2025-12-10 09:55:59] 2025-12-10 17:54:59,608 | INFO     | chi2: 4.689414141469505
[2025-12-10 09:55:59] 2025-12-10 17:54:59,609 | INFO     | sum of square deviations: 289175609848.0
[2025-12-10 09:55:59] 2025-12-10 17:54:59,621 | INFO     | sum of deviations: 2535891880562.0
[2025-12-10 09:55:59] 2025-12-10 17:54:59,621 | INFO     | mean x: 1765359173.0
[2025-12-10 09:55:59] 2025-12-10 17:54:59,621 | INFO     | mean y: 3164840.876151484
[2025-12-10 09:55:59] 2025-12-10 17:54:59,621 | INFO     | intersect: -15477947122.333593
[2025-12-10 09:55:59] 2025-12-10 17:54:59,622 | INFO     | chi2: 2.22073108615321
[2025-12-10 09:55:59] 2025-12-10 17:54:59,622 | INFO     | current chi2=2.22073108615321 (change=52.64374143211613 %)
[2025-12-10 09:55:59] 2025-12-10 17:54:59,622 | INFO     | sum of square deviations: 284758540983.0
[2025-12-10 09:55:59] 2025-12-10 17:54:59,633 | INFO     | sum of deviations: 2525589989746.0
[2025-12-10 09:55:59] 2025-12-10 17:54:59,637 | INFO     | mean x: 1765359020.5
[2025-12-10 09:55:59] 2025-12-10 17:54:59,637 | INFO     | mean y: 3164483.3127572015
[2025-12-10 09:55:59] 2025-12-10 17:54:59,637 | INFO     | intersect: -15654216872.454123
[2025-12-10 09:55:59] 2025-12-10 17:54:59,637 | INFO     | chi2: 2.1968661710380086
[2025-12-10 09:55:59] 2025-12-10 17:54:59,637 | INFO     | current chi2=2.1968661710380086 (change=1.0746422772214501 %)
[2025-12-10 09:55:59] 2025-12-10 17:54:59,637 | INFO     | right removable region: 971
[2025-12-10 09:55:59] 2025-12-10 17:54:59,638 | INFO     | sum of square deviations: 289175609848.0
[2025-12-10 09:55:59] 2025-12-10 17:54:59,648 | INFO     | sum of deviations: 1979112697938.0
[2025-12-10 09:55:59] 2025-12-10 17:54:59,649 | INFO     | mean x: 1765359478.0
[2025-12-10 09:55:59] 2025-12-10 17:54:59,649 | INFO     | mean y: 3163682.6243602866
[2025-12-10 09:55:59] 2025-12-10 17:54:59,649 | INFO     | intersect: -12078924987.20321
[2025-12-10 09:55:59] 2025-12-10 17:54:59,649 | INFO     | chi2: 2.8101066978049394
[2025-12-10 09:55:59] 2025-12-10 17:54:59,649 | INFO     | current chi2=2.8101066978049394 (change=40.075527282724785 %)
[2025-12-10 09:55:59] 2025-12-10 17:54:59,650 | INFO     | sum of square deviations: 284758540983.0
[2025-12-10 09:55:59] 2025-12-10 17:54:59,660 | INFO     | sum of deviations: 1890473819276.4998
[2025-12-10 09:55:59] 2025-12-10 17:54:59,660 | INFO     | mean x: 1765359630.5
[2025-12-10 09:55:59] 2025-12-10 17:54:59,660 | INFO     | mean y: 3166742.4269547327
[2025-12-10 09:55:59] 2025-12-10 17:54:59,660 | INFO     | intersect: -11716819430.93641
[2025-12-10 09:55:59] 2025-12-10 17:54:59,661 | INFO     | chi2: 2.728121664931563
[2025-12-10 09:55:59] 2025-12-10 17:54:59,661 | INFO     | current chi2=2.728121664931563 (change=2.9175060483439106 %)
[2025-12-10 09:55:59] 2025-12-10 17:54:59,661 | INFO     | left removable region: 20
[2025-12-10 09:55:59] 2025-12-10 17:54:59,661 | INFO     | sum of square deviations: 266697837700.0
[2025-12-10 09:55:59] 2025-12-10 17:54:59,671 | INFO     | sum of deviations: 2039315715919.0
[2025-12-10 09:55:59] 2025-12-10 17:54:59,671 | INFO     | mean x: 1765359600.0
[2025-12-10 09:55:59] 2025-12-10 17:54:59,671 | INFO     | mean y: 3181247.841219769
[2025-12-10 09:55:59] 2025-12-10 17:54:59,671 | INFO     | intersect: -13495711759.975918
[2025-12-10 09:55:59] 2025-12-10 17:54:59,672 | INFO     | chi2: 0.16484859064465587
[2025-12-10 09:55:59] 2025-12-10 17:54:59,672 | INFO     | current memory leak: 7.65 B/s (using 951 data points, chi2=0.16)
[2025-12-10 09:55:59] 2025-12-10 17:54:59,673 | INFO     | could have reported an average CPU frequency of 3999 MHz (37 samples)
[2025-12-10 09:55:59] 2025-12-10 17:54:59,673 | INFO     | ..............................
[2025-12-10 09:55:59] 2025-12-10 17:54:59,673 | INFO     | . Timing measurements:
[2025-12-10 09:55:59] 2025-12-10 17:54:59,673 | INFO     | . get job = 0 s
[2025-12-10 09:55:59] 2025-12-10 17:54:59,673 | INFO     | . initial setup = 5 s
[2025-12-10 09:55:59] 2025-12-10 17:54:59,673 | INFO     | . payload setup = 8 s
[2025-12-10 09:55:59] 2025-12-10 17:54:59,673 | INFO     | . stage-in = 0 s
[2025-12-10 09:55:59] 2025-12-10 17:54:59,673 | INFO     | . payload execution = 59886 s
[2025-12-10 09:55:59] 2025-12-10 17:54:59,673 | INFO     | . stage-out = 4 s
[2025-12-10 09:55:59] 2025-12-10 17:54:59,673 | INFO     | . log creation = 0 s
[2025-12-10 09:55:59] 2025-12-10 17:54:59,673 | INFO     | ..............................
[2025-12-10 09:55:59] 2025-12-10 17:54:59,963 | INFO     | 
[2025-12-10 09:55:59] 2025-12-10 17:54:59,963 | INFO     | job summary report
[2025-12-10 09:55:59] 2025-12-10 17:54:59,963 | INFO     | --------------------------------------------------
[2025-12-10 09:55:59] 2025-12-10 17:54:59,963 | INFO     | PanDA job id: 6895381220
[2025-12-10 09:55:59] 2025-12-10 17:54:59,963 | INFO     | task id: 47556137
[2025-12-10 09:55:59] 2025-12-10 17:54:59,963 | INFO     | errors: (none)
[2025-12-10 09:55:59] 2025-12-10 17:54:59,963 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-10 09:55:59] 2025-12-10 17:54:59,963 | INFO     | pilot state: finished 
[2025-12-10 09:55:59] 2025-12-10 17:54:59,963 | INFO     | transexitcode: 0
[2025-12-10 09:55:59] 2025-12-10 17:54:59,963 | INFO     | exeerrorcode: 0
[2025-12-10 09:55:59] 2025-12-10 17:54:59,963 | INFO     | exeerrordiag: 
[2025-12-10 09:55:59] 2025-12-10 17:54:59,963 | INFO     | exitcode: 0
[2025-12-10 09:55:59] 2025-12-10 17:54:59,963 | INFO     | exitmsg: OK
[2025-12-10 09:55:59] 2025-12-10 17:54:59,963 | INFO     | cpuconsumptiontime: 134689 s
[2025-12-10 09:55:59] 2025-12-10 17:54:59,963 | INFO     | nevents: 1000
[2025-12-10 09:55:59] 2025-12-10 17:54:59,963 | INFO     | neventsw: 0
[2025-12-10 09:55:59] 2025-12-10 17:54:59,963 | INFO     | pid: 2709628
[2025-12-10 09:55:59] 2025-12-10 17:54:59,963 | INFO     | pgrp: 2709628
[2025-12-10 09:55:59] 2025-12-10 17:54:59,963 | INFO     | corecount: 10
[2025-12-10 09:55:59] 2025-12-10 17:54:59,963 | INFO     | event service: False
[2025-12-10 09:55:59] 2025-12-10 17:54:59,963 | INFO     | sizes: {0: 2284328, 6: 2284590, 11: 2284618, 59899: 2337018, 59904: 2346096, 59910: 2346286}
[2025-12-10 09:55:59] 2025-12-10 17:54:59,964 | INFO     | --------------------------------------------------
[2025-12-10 09:55:59] 2025-12-10 17:54:59,964 | INFO     | 
[2025-12-10 09:55:59] 2025-12-10 17:54:59,964 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc538/slots/4
[2025-12-10 09:55:59] 2025-12-10 17:54:59,985 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-10 09:55:59] 2025-12-10 17:54:59,985 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-10 09:55:59] 2025-12-10 17:54:59,985 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-10 09:55:59] 2025-12-10 17:54:59,985 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-10 09:55:59] 2025-12-10 17:54:59,985 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-10 09:55:59] 2025-12-10 17:54:59,985 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-10 09:55:59] 2025-12-10 17:54:59,985 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-10 09:55:59] 2025-12-10 17:54:59,985 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-10 09:55:59] 2025-12-10 17:54:59,985 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-10 09:55:59] 2025-12-10 17:54:59,985 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-10 09:55:59] 2025-12-10 17:54:59,985 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-10 09:55:59] 2025-12-10 17:54:59,986 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-10 09:55:59] 2025-12-10 17:54:59,986 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-10 09:55:59] 2025-12-10 17:54:59,986 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-10 09:55:59] 2025-12-10 17:54:59,986 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-10 09:55:59] 2025-12-10 17:54:59,986 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-10 09:55:59] 2025-12-10 17:54:59,986 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-10 09:55:59] 2025-12-10 17:54:59,986 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-10 09:55:59] 2025-12-10 17:54:59,986 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-10 09:55:59] 2025-12-10 17:54:59,986 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-10 09:55:59] 2025-12-10 17:54:59,986 | INFO     | job 6895381220 has completed (purged errors)
[2025-12-10 09:55:59] 2025-12-10 17:54:59,986 | INFO     | overall cleanup function is called
[2025-12-10 09:55:59] 2025-12-10 17:55:01,021 | INFO     | --- collectZombieJob: --- 10, [2709628]
[2025-12-10 09:55:59] 2025-12-10 17:55:01,021 | INFO     | zombie collector waiting for pid 2709628
[2025-12-10 09:55:59] 2025-12-10 17:55:01,021 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-10 09:55:59] 2025-12-10 17:55:01,021 | INFO     | collected zombie processes
[2025-12-10 09:55:59] 2025-12-10 17:55:01,021 | INFO     | will attempt to kill all subprocesses of pid=2709628
[2025-12-10 09:55:59] 2025-12-10 17:55:01,322 | INFO     | process IDs to be killed: [2709628] (in reverse order)
[2025-12-10 09:55:59] 2025-12-10 17:55:01,456 | WARNING  | found no corresponding commands to process id(s)
[2025-12-10 09:55:59] 2025-12-10 17:55:01,456 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-10 09:55:59] 2025-12-10 17:55:01,462 | INFO     | did not find any defunct processes belonging to 2709628
[2025-12-10 09:55:59] 2025-12-10 17:55:01,467 | INFO     | did not find any defunct processes belonging to 2709628
[2025-12-10 09:55:59] 2025-12-10 17:55:01,469 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-10 09:55:59] 2025-12-10 17:55:01,469 | INFO     | ready for new job
[2025-12-10 09:55:59] 2025-12-10 17:55:01,469 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-10 09:55:59] 2025-12-10 17:55:01,473 | INFO     | ***************************************
[2025-12-10 09:55:59] 2025-12-10 17:55:01,473 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-10 09:55:59] 2025-12-10 17:55:01,473 | INFO     | ***************************************
[2025-12-10 09:55:59] 2025-12-10 17:55:01,473 | INFO     | 
[2025-12-10 09:55:59] 2025-12-10 17:55:01,474 | INFO     | architecture information:
[2025-12-10 09:55:59] 2025-12-10 17:55:01,475 | INFO     | executing command: cat /etc/os-release
[2025-12-10 09:55:59] 2025-12-10 17:55:01,491 | INFO     | cat /etc/os-release:
[2025-12-10 09:55:59] NAME="CentOS Linux"
[2025-12-10 09:55:59] VERSION="7 (Core)"
[2025-12-10 09:55:59] ID="centos"
[2025-12-10 09:55:59] ID_LIKE="rhel fedora"
[2025-12-10 09:55:59] VERSION_ID="7"
[2025-12-10 09:55:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-10 09:55:59] ANSI_COLOR="0;31"
[2025-12-10 09:55:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-10 09:55:59] HOME_URL="https://www.centos.org/"
[2025-12-10 09:55:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-10 09:55:59] 
[2025-12-10 09:55:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-10 09:55:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-10 09:55:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-10 09:55:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-10 09:55:59] 
[2025-12-10 09:55:59] 2025-12-10 17:55:01,491 | INFO     | ***************************************
[2025-12-10 09:55:59] 2025-12-10 17:55:01,994 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc538/slots/4
[2025-12-10 09:55:59] 2025-12-10 17:55:02,010 | INFO     | sufficient remaining disk space (189169401856 B)
[2025-12-10 09:55:59] 2025-12-10 17:55:02,011 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-10 09:55:59] 2025-12-10 17:55:02,011 | INFO     | current server update state: UPDATING_FINAL
[2025-12-10 09:55:59] 2025-12-10 17:55:02,011 | INFO     | update_server=False
[2025-12-10 09:55:59] 2025-12-10 17:55:02,011 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-10 09:55:59] 2025-12-10 17:55:02,011 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-10 09:55:59] 2025-12-10 17:55:02,040 | INFO     | all data control threads have been joined
[2025-12-10 09:55:59] 2025-12-10 17:55:02,483 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-10 09:55:59] 2025-12-10 17:55:02,483 | INFO     | aborting loop
[2025-12-10 09:55:59] 2025-12-10 17:55:02,644 | INFO     | all payload control threads have been joined
[2025-12-10 09:55:59] 2025-12-10 17:55:03,016 | INFO     | [job] retrieve thread has finished
[2025-12-10 09:55:59] 2025-12-10 17:55:03,045 | INFO     | [data] control thread has finished
[2025-12-10 09:55:59] 2025-12-10 17:55:03,366 | INFO     | [job] validate thread has finished
[2025-12-10 09:55:59] 2025-12-10 17:55:03,429 | INFO     | [data] copytool_in thread has finished
[2025-12-10 09:55:59] 2025-12-10 17:55:03,434 | INFO     | [payload] failed_post thread has finished
[2025-12-10 09:55:59] 2025-12-10 17:55:03,442 | INFO     | all job control threads have been joined
[2025-12-10 09:55:59] 2025-12-10 17:55:03,491 | INFO     | [job] job monitor thread has finished
[2025-12-10 09:55:59] 2025-12-10 17:55:03,558 | INFO     | [payload] validate_pre thread has finished
[2025-12-10 09:55:59] 2025-12-10 17:55:03,649 | INFO     | [payload] control thread has finished
[2025-12-10 09:55:59] 2025-12-10 17:55:03,805 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-10 09:55:59] 2025-12-10 17:55:04,016 | INFO     | [data] copytool_out thread has finished
[2025-12-10 09:55:59] 2025-12-10 17:55:04,190 | INFO     | [payload] execute_payloads thread has finished
[2025-12-10 09:55:59] 2025-12-10 17:55:04,197 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-10 09:55:59] 2025-12-10 17:55:04,205 | INFO     | [payload] validate_post thread has finished
[2025-12-10 09:55:59] 2025-12-10 17:55:04,338 | INFO     | [job] create_data_payload thread has finished
[2025-12-10 09:55:59] 2025-12-10 17:55:04,447 | INFO     | [job] control thread has finished
[2025-12-10 09:55:59] 2025-12-10 17:55:04,732 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-10 09:55:59] 2025-12-10 17:55:05,737 | INFO     | [job] queue monitor thread has finished
[2025-12-10 09:55:59] 2025-12-10 17:55:07,813 | INFO     | [data] queue_monitor thread has finished
[2025-12-10 09:55:59] 2025-12-10 17:55:32,148 | INFO     | PID=2696162 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-10 09:55:59] 2025-12-10 17:55:32,149 | INFO     | .. there are 14 such processes running
[2025-12-10 09:55:59] 2025-12-10 17:55:32,149 | INFO     | found 0 job(s) in 20 queues
[2025-12-10 09:55:59] 2025-12-10 17:55:32,149 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-10 09:55:59] 2025-12-10 17:55:32,149 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-10 09:55:59] 2025-12-10 17:55:52,644 | INFO     | [monitor] cgroup control has ended
[2025-12-10 09:55:59] 2025-12-10 17:55:53,702 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129174398379840)>', '<ExcThread(monitor, started 129173506987776)>']
[2025-12-10 09:55:59] 2025-12-10 17:55:54,264 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-10 09:55:59] 2025-12-10 17:55:54,264 | INFO     | [monitor] control thread has ended
[2025-12-10 09:55:59] 2025-12-10 17:55:58,727 | INFO     | all workflow threads have been joined
[2025-12-10 09:55:59] 2025-12-10 17:55:58,727 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-10 09:55:59] 2025-12-10 17:55:58,727 | INFO     | traces error code: 0
[2025-12-10 09:55:59] 2025-12-10 17:55:58,727 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-10 09:55:59] 2025-12-10 17:55:58,818 [wrapper] ==== pilot stdout END ====
[2025-12-10 09:55:59] 2025-12-10 17:55:58,820 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-10 09:55:59] 2025-12-10 17:55:58,821 [wrapper] pilotpid: 2696162
[2025-12-10 09:55:59] 2025-12-10 17:55:58,823 [wrapper] Pilot exit status: 0
[2025-12-10 09:55:59] 2025-12-10 17:55:58,832 [wrapper] pandaids: 6895381220
[2025-12-10 09:55:59] 2025-12-10 17:55:58,896 [wrapper] cleanup supervisor_pilot 4188157 2696163
[2025-12-10 09:55:59] 2025-12-10 17:55:58,899 [wrapper] Test setup, not cleaning
[2025-12-10 09:55:59] 2025-12-10 17:55:58,903 [wrapper] apfmon messages muted
[2025-12-10 09:55:59] 2025-12-10 17:55:58,905 [wrapper] ==== wrapper stdout END ====
[2025-12-10 09:55:59] 2025-12-10 17:55:58,906 [wrapper] ==== wrapper stderr END ====
[2025-12-10 09:55:59]  *** Error codes and diagnostics ***
[2025-12-10 09:55:59]     "exeErrorCode": 0,
[2025-12-10 09:55:59]     "exeErrorDiag": "",
[2025-12-10 09:55:59]     "pilotErrorCode": 0,
[2025-12-10 09:55:59]     "pilotErrorDiag": "",
[2025-12-10 09:55:59]  *** Listing of results directory ***
[2025-12-10 09:55:59] total 1318176
[2025-12-10 09:55:59] -rw-r--r-- 1 root root    576529 Nov 23 19:19 pilot3.tar.gz
[2025-12-10 09:55:59] -rwx------ 1 4871 1028     36292 Nov 23 19:22 runpilot2-wrapper.sh
[2025-12-10 09:55:59] -rw-r--r-- 1 root root      5112 Nov 23 19:22 queuedata.json
[2025-12-10 09:55:59] -rw-r--r-- 1 root root       100 Dec  9 17:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-10 09:55:59] -rwxr-xr-x 1 root root      7986 Dec  9 17:15 run_atlas
[2025-12-10 09:55:59] -rw-r--r-- 1 root root       105 Dec  9 17:15 job.xml
[2025-12-10 09:55:59] -rw-r--r-- 1 root root      7075 Dec  9 17:15 init_data.xml
[2025-12-10 09:55:59] -rw-r--r-- 2 root root 411632862 Dec  9 17:15 EVNT.47483658._000996.pool.root.1
[2025-12-10 09:55:59] -rw-r--r-- 2 root root     15847 Dec  9 17:15 start_atlas.sh
[2025-12-10 09:55:59] drwxrwx--x 2 root root      4096 Dec  9 17:15 shared
[2025-12-10 09:55:59] -rw-r--r-- 2 root root    590100 Dec  9 17:15 input.tar.gz
[2025-12-10 09:55:59] -rw-r--r-- 1 root root         0 Dec  9 17:15 boinc_lockfile
[2025-12-10 09:55:59] -rw-r--r-- 1 root root      2785 Dec  9 17:15 pandaJob.out
[2025-12-10 09:55:59] -rw------- 1 root root    979199 Dec  9 17:16 agis_schedconf.cvmfs.json
[2025-12-10 09:55:59] drwxr-xr-x 5  320  320      4096 Dec  9 17:16 pilot3
[2025-12-10 09:55:59] -rw-r--r-- 1 root root       533 Dec 10 09:48 boinc_task_state.xml
[2025-12-10 09:55:59] -rw------- 1 root root 912535021 Dec 10 09:54 HITS.47556137._009824.pool.root.1
[2025-12-10 09:55:59] -rw------- 1 root root      1049 Dec 10 09:54 memory_monitor_summary.json
[2025-12-10 09:55:59] -rw------- 1 root root   1516240 Dec 10 09:54 agis_ddmendpoints.agis.ALL.json
[2025-12-10 09:55:59] -rw------- 1 root root   2351639 Dec 10 09:54 log.47556137._009824.job.log.tgz.1
[2025-12-10 09:55:59] -rw------- 1 root root      8598 Dec 10 09:54 heartbeat.json
[2025-12-10 09:55:59] -rw------- 1 root root        95 Dec 10 09:55 pilot_heartbeat.json
[2025-12-10 09:55:59] -rw-r--r-- 1 root root      8192 Dec 10 09:55 boinc_mmap_file
[2025-12-10 09:55:59] -rw-r--r-- 1 root root        29 Dec 10 09:55 wrapper_checkpoint.txt
[2025-12-10 09:55:59] -rw------- 1 root root      4839 Dec 10 09:55 pilotlog.txt
[2025-12-10 09:55:59] -rw------- 1 root root   8517140 Dec 10 09:55 log.47556137._009824.job.log.1
[2025-12-10 09:55:59] -rw------- 1 root root       353 Dec 10 09:55 output.list
[2025-12-10 09:55:59] -rw-r--r-- 1 root root       620 Dec 10 09:55 runtime_log
[2025-12-10 09:55:59] -rw------- 1 root root  10885120 Dec 10 09:55 result.tar.gz
[2025-12-10 09:55:59] -rw------- 1 root root       662 Dec 10 09:55 uE5KDmnKch8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmatIKDmwNg48n.diag
[2025-12-10 09:55:59] -rw-r--r-- 1 root root      9021 Dec 10 09:55 runtime_log.err
[2025-12-10 09:55:59] -rw-r--r-- 1 root root     21378 Dec 10 09:55 stderr.txt
[2025-12-10 09:55:59] HITS file was successfully produced:
[2025-12-10 09:55:59] -rw------- 1 root root 912535021 Dec 10 09:54 shared/HITS.pool.root.1
[2025-12-10 09:55:59]  *** Contents of shared directory: ***
[2025-12-10 09:55:59] total 1304372
[2025-12-10 09:55:59] -rw-r--r-- 2 root root 411632862 Dec  9 17:15 ATLAS.root_0
[2025-12-10 09:55:59] -rw-r--r-- 2 root root     15847 Dec  9 17:15 start_atlas.sh
[2025-12-10 09:55:59] -rw-r--r-- 2 root root    590100 Dec  9 17:15 input.tar.gz
[2025-12-10 09:55:59] -rw------- 1 root root 912535021 Dec 10 09:54 HITS.pool.root.1
[2025-12-10 09:55:59] -rw------- 1 root root  10885120 Dec 10 09:55 result.tar.gz
09:56:00 (2688428): run_atlas exited; CPU time 134794.575944
09:56:00 (2688428): called boinc_finish(0)

</stderr_txt>
]]>

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