Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
17:15:55 (2688495): wrapper (7.7.26015): starting
17:15:55 (2688495): wrapper: running run_atlas (--nthreads 10)
[2025-12-09 17:15:55] Arguments: --nthreads 10
[2025-12-09 17:15:55] Threads: 10
[2025-12-09 17:15:55] Checking for CVMFS
[2025-12-09 17:15:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-09 17:15:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-09 17:15:56] Running cvmfs_config stat atlas.cern.ch
[2025-12-09 17:15:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-09 17:15:56] 2.13.3.0 11319 4932 72328 153823 0 82 3640506 4096001 13771 130560 0 723434507 99.999 534017 498 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-12-09 17:15:56] CVMFS is ok
[2025-12-09 17:15:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-09 17:15:56] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-09 17:15:56] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-09 17:15:56] Further information can be found at the LHC@home message board.
[2025-12-09 17:15:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-09 17:15:56] Checking for apptainer binary...
[2025-12-09 17:15:56] apptainer is not installed, using version from CVMFS
[2025-12-09 17:15:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-09 17:15:57] 7950x-linux
[2025-12-09 17:15:57] apptainer works
[2025-12-09 17:15:57] Set ATHENA_PROC_NUMBER=10
[2025-12-09 17:15:57] Set ATHENA_CORE_NUMBER=10
[2025-12-09 17:15:57] Starting ATLAS job with PandaID=6895380388
[2025-12-09 17:15:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc538/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-10 10:08:00]  *** The last 200 lines of the pilot log: ***
[2025-12-10 10:08:00] 2025-12-10 18:07:01,533 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-10 10:08:00] 2025-12-10 18:07:01,738 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-10 10:08:00] 2025-12-10 18:07:01,741 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3999.997656250001
[2025-12-10 10:08:00] 2025-12-10 18:07:01,744 | INFO     | using path: /var/lib/multiboinc/boinc538/slots/5/PanDA_Pilot-6895380388/memory_monitor_summary.json (trf name=prmon)
[2025-12-10 10:08:00] 2025-12-10 18:07:01,744 | INFO     | extracted standard info from prmon json
[2025-12-10 10:08:00] 2025-12-10 18:07:01,744 | INFO     | extracted standard memory fields from prmon json
[2025-12-10 10:08:00] 2025-12-10 18:07:01,744 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-10 10:08:00] 2025-12-10 18:07:01,752 | INFO     | fitting pss+swap vs Time
[2025-12-10 10:08:00] 2025-12-10 18:07:01,753 | INFO     | sum of square deviations: 304534947132.5
[2025-12-10 10:08:00] 2025-12-10 18:07:01,768 | INFO     | sum of deviations: 2317682967018.001
[2025-12-10 10:08:00] 2025-12-10 18:07:01,768 | INFO     | mean x: 1765359691.5
[2025-12-10 10:08:00] 2025-12-10 18:07:01,768 | INFO     | mean y: 3160814.23943662
[2025-12-10 10:08:00] 2025-12-10 18:07:01,768 | INFO     | intersect: -13432223617.582485
[2025-12-10 10:08:00] 2025-12-10 18:07:01,768 | INFO     | chi2: 4.67841523348847
[2025-12-10 10:08:00] 2025-12-10 18:07:01,769 | INFO     | sum of square deviations: 299962424190.0
[2025-12-10 10:08:00] 2025-12-10 18:07:01,779 | INFO     | sum of deviations: 2623695426412.9995
[2025-12-10 10:08:00] 2025-12-10 18:07:01,780 | INFO     | mean x: 1765359539.0
[2025-12-10 10:08:00] 2025-12-10 18:07:01,780 | INFO     | mean y: 3171012.7886754298
[2025-12-10 10:08:00] 2025-12-10 18:07:01,780 | INFO     | intersect: -15437982194.837898
[2025-12-10 10:08:00] 2025-12-10 18:07:01,780 | INFO     | chi2: 2.25996931888332
[2025-12-10 10:08:00] 2025-12-10 18:07:01,780 | INFO     | current chi2=2.25996931888332 (change=51.69369955222701 %)
[2025-12-10 10:08:00] 2025-12-10 18:07:01,781 | INFO     | sum of square deviations: 295435902110.0
[2025-12-10 10:08:00] 2025-12-10 18:07:01,791 | INFO     | sum of deviations: 2611754555968.5015
[2025-12-10 10:08:00] 2025-12-10 18:07:01,791 | INFO     | mean x: 1765359386.5
[2025-12-10 10:08:00] 2025-12-10 18:07:01,791 | INFO     | mean y: 3170608.476626016
[2025-12-10 10:08:00] 2025-12-10 18:07:01,791 | INFO     | intersect: -15603210971.025623
[2025-12-10 10:08:00] 2025-12-10 18:07:01,792 | INFO     | chi2: 2.2297450985589307
[2025-12-10 10:08:00] 2025-12-10 18:07:01,792 | INFO     | current chi2=2.2297450985589307 (change=1.3373730374058177 %)
[2025-12-10 10:08:00] 2025-12-10 18:07:01,792 | INFO     | right removable region: 983
[2025-12-10 10:08:00] 2025-12-10 18:07:01,793 | INFO     | sum of square deviations: 299962424190.0
[2025-12-10 10:08:00] 2025-12-10 18:07:01,803 | INFO     | sum of deviations: 2051162049569.9998
[2025-12-10 10:08:00] 2025-12-10 18:07:01,803 | INFO     | mean x: 1765359844.0
[2025-12-10 10:08:00] 2025-12-10 18:07:01,803 | INFO     | mean y: 3169689.6420626896
[2025-12-10 10:08:00] 2025-12-10 18:07:01,803 | INFO     | intersect: -12068472702.319681
[2025-12-10 10:08:00] 2025-12-10 18:07:01,804 | INFO     | chi2: 2.788433131266462
[2025-12-10 10:08:00] 2025-12-10 18:07:01,804 | INFO     | current chi2=2.788433131266462 (change=40.3979127097006 %)
[2025-12-10 10:08:00] 2025-12-10 18:07:01,804 | INFO     | sum of square deviations: 295435902110.0
[2025-12-10 10:08:00] 2025-12-10 18:07:01,815 | INFO     | sum of deviations: 1957205486453.501
[2025-12-10 10:08:00] 2025-12-10 18:07:01,815 | INFO     | mean x: 1765359996.5
[2025-12-10 10:08:00] 2025-12-10 18:07:01,815 | INFO     | mean y: 3172854.712398374
[2025-12-10 10:08:00] 2025-12-10 18:07:01,815 | INFO     | intersect: -11691994340.738562
[2025-12-10 10:08:00] 2025-12-10 18:07:01,815 | INFO     | chi2: 2.695176879865232
[2025-12-10 10:08:00] 2025-12-10 18:07:01,815 | INFO     | current chi2=2.695176879865232 (change=3.344396189944665 %)
[2025-12-10 10:08:00] 2025-12-10 18:07:01,815 | INFO     | left removable region: 20
[2025-12-10 10:08:00] 2025-12-10 18:07:01,816 | INFO     | sum of square deviations: 276921590322.0
[2025-12-10 10:08:00] 2025-12-10 18:07:01,826 | INFO     | sum of deviations: 2108917330128.0
[2025-12-10 10:08:00] 2025-12-10 18:07:01,830 | INFO     | mean x: 1765359966.0
[2025-12-10 10:08:00] 2025-12-10 18:07:01,830 | INFO     | mean y: 3187529.037383178
[2025-12-10 10:08:00] 2025-12-10 18:07:01,830 | INFO     | intersect: -13441044904.708694
[2025-12-10 10:08:00] 2025-12-10 18:07:01,830 | INFO     | chi2: 0.17036717548025843
[2025-12-10 10:08:00] 2025-12-10 18:07:01,830 | INFO     | current memory leak: 7.62 B/s (using 963 data points, chi2=0.17)
[2025-12-10 10:08:00] 2025-12-10 18:07:01,831 | INFO     | could have reported an average CPU frequency of 3999 MHz (37 samples)
[2025-12-10 10:08:00] 2025-12-10 18:07:01,831 | INFO     | ..............................
[2025-12-10 10:08:00] 2025-12-10 18:07:01,831 | INFO     | . Timing measurements:
[2025-12-10 10:08:00] 2025-12-10 18:07:01,831 | INFO     | . get job = 0 s
[2025-12-10 10:08:00] 2025-12-10 18:07:01,831 | INFO     | . initial setup = 5 s
[2025-12-10 10:08:00] 2025-12-10 18:07:01,831 | INFO     | . payload setup = 8 s
[2025-12-10 10:08:00] 2025-12-10 18:07:01,831 | INFO     | . stage-in = 0 s
[2025-12-10 10:08:00] 2025-12-10 18:07:01,831 | INFO     | . payload execution = 60606 s
[2025-12-10 10:08:00] 2025-12-10 18:07:01,831 | INFO     | . stage-out = 3 s
[2025-12-10 10:08:00] 2025-12-10 18:07:01,831 | INFO     | . log creation = 0 s
[2025-12-10 10:08:00] 2025-12-10 18:07:01,831 | INFO     | ..............................
[2025-12-10 10:08:00] 2025-12-10 18:07:01,883 | INFO     | 
[2025-12-10 10:08:00] 2025-12-10 18:07:01,883 | INFO     | job summary report
[2025-12-10 10:08:00] 2025-12-10 18:07:01,883 | INFO     | --------------------------------------------------
[2025-12-10 10:08:00] 2025-12-10 18:07:01,883 | INFO     | PanDA job id: 6895380388
[2025-12-10 10:08:00] 2025-12-10 18:07:01,883 | INFO     | task id: 47556137
[2025-12-10 10:08:00] 2025-12-10 18:07:01,883 | INFO     | errors: (none)
[2025-12-10 10:08:00] 2025-12-10 18:07:01,884 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-10 10:08:00] 2025-12-10 18:07:01,884 | INFO     | pilot state: finished 
[2025-12-10 10:08:00] 2025-12-10 18:07:01,884 | INFO     | transexitcode: 0
[2025-12-10 10:08:00] 2025-12-10 18:07:01,884 | INFO     | exeerrorcode: 0
[2025-12-10 10:08:00] 2025-12-10 18:07:01,884 | INFO     | exeerrordiag: 
[2025-12-10 10:08:00] 2025-12-10 18:07:01,884 | INFO     | exitcode: 0
[2025-12-10 10:08:00] 2025-12-10 18:07:01,884 | INFO     | exitmsg: OK
[2025-12-10 10:08:00] 2025-12-10 18:07:01,884 | INFO     | cpuconsumptiontime: 136514 s
[2025-12-10 10:08:00] 2025-12-10 18:07:01,884 | INFO     | nevents: 1000
[2025-12-10 10:08:00] 2025-12-10 18:07:01,884 | INFO     | neventsw: 0
[2025-12-10 10:08:00] 2025-12-10 18:07:01,884 | INFO     | pid: 2709634
[2025-12-10 10:08:00] 2025-12-10 18:07:01,884 | INFO     | pgrp: 2709634
[2025-12-10 10:08:00] 2025-12-10 18:07:01,884 | INFO     | corecount: 10
[2025-12-10 10:08:00] 2025-12-10 18:07:01,884 | INFO     | event service: False
[2025-12-10 10:08:00] 2025-12-10 18:07:01,884 | INFO     | sizes: {0: 2284278, 6: 2284540, 11: 2284568, 60618: 2337192, 60622: 2346214, 60624: 2346270, 60631: 2346644}
[2025-12-10 10:08:00] 2025-12-10 18:07:01,884 | INFO     | --------------------------------------------------
[2025-12-10 10:08:00] 2025-12-10 18:07:01,884 | INFO     | 
[2025-12-10 10:08:00] 2025-12-10 18:07:01,884 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc538/slots/5
[2025-12-10 10:08:00] 2025-12-10 18:07:01,909 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-10 10:08:00] 2025-12-10 18:07:01,909 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-10 10:08:00] 2025-12-10 18:07:01,909 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-10 10:08:00] 2025-12-10 18:07:01,909 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-10 10:08:00] 2025-12-10 18:07:01,909 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-10 10:08:00] 2025-12-10 18:07:01,909 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-10 10:08:00] 2025-12-10 18:07:01,909 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-10 10:08:00] 2025-12-10 18:07:01,909 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-10 10:08:00] 2025-12-10 18:07:01,909 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-10 10:08:00] 2025-12-10 18:07:01,909 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-10 10:08:00] 2025-12-10 18:07:01,909 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-10 10:08:00] 2025-12-10 18:07:01,909 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-10 10:08:00] 2025-12-10 18:07:01,909 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-10 10:08:00] 2025-12-10 18:07:01,909 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-10 10:08:00] 2025-12-10 18:07:01,909 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-10 10:08:00] 2025-12-10 18:07:01,909 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-10 10:08:00] 2025-12-10 18:07:01,909 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-10 10:08:00] 2025-12-10 18:07:01,910 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-10 10:08:00] 2025-12-10 18:07:01,910 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-10 10:08:00] 2025-12-10 18:07:01,910 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-10 10:08:00] 2025-12-10 18:07:01,910 | INFO     | job 6895380388 has completed (purged errors)
[2025-12-10 10:08:00] 2025-12-10 18:07:01,910 | INFO     | overall cleanup function is called
[2025-12-10 10:08:00] 2025-12-10 18:07:02,924 | INFO     | --- collectZombieJob: --- 10, [2709634]
[2025-12-10 10:08:00] 2025-12-10 18:07:02,924 | INFO     | zombie collector waiting for pid 2709634
[2025-12-10 10:08:00] 2025-12-10 18:07:02,924 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-10 10:08:00] 2025-12-10 18:07:02,924 | INFO     | collected zombie processes
[2025-12-10 10:08:00] 2025-12-10 18:07:02,924 | INFO     | will attempt to kill all subprocesses of pid=2709634
[2025-12-10 10:08:00] 2025-12-10 18:07:03,235 | INFO     | process IDs to be killed: [2709634] (in reverse order)
[2025-12-10 10:08:00] 2025-12-10 18:07:03,389 | WARNING  | found no corresponding commands to process id(s)
[2025-12-10 10:08:00] 2025-12-10 18:07:03,389 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-10 10:08:00] 2025-12-10 18:07:03,395 | INFO     | did not find any defunct processes belonging to 2709634
[2025-12-10 10:08:00] 2025-12-10 18:07:03,400 | INFO     | did not find any defunct processes belonging to 2709634
[2025-12-10 10:08:00] 2025-12-10 18:07:03,401 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-10 10:08:00] 2025-12-10 18:07:03,401 | INFO     | ready for new job
[2025-12-10 10:08:00] 2025-12-10 18:07:03,401 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-10 10:08:00] 2025-12-10 18:07:03,404 | INFO     | ***************************************
[2025-12-10 10:08:00] 2025-12-10 18:07:03,404 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-10 10:08:00] 2025-12-10 18:07:03,404 | INFO     | ***************************************
[2025-12-10 10:08:00] 2025-12-10 18:07:03,404 | INFO     | 
[2025-12-10 10:08:00] 2025-12-10 18:07:03,406 | INFO     | architecture information:
[2025-12-10 10:08:00] 2025-12-10 18:07:03,406 | INFO     | executing command: cat /etc/os-release
[2025-12-10 10:08:00] 2025-12-10 18:07:03,426 | INFO     | cat /etc/os-release:
[2025-12-10 10:08:00] NAME="CentOS Linux"
[2025-12-10 10:08:00] VERSION="7 (Core)"
[2025-12-10 10:08:00] ID="centos"
[2025-12-10 10:08:00] ID_LIKE="rhel fedora"
[2025-12-10 10:08:00] VERSION_ID="7"
[2025-12-10 10:08:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-10 10:08:00] ANSI_COLOR="0;31"
[2025-12-10 10:08:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-10 10:08:00] HOME_URL="https://www.centos.org/"
[2025-12-10 10:08:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-10 10:08:00] 
[2025-12-10 10:08:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-10 10:08:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-10 10:08:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-10 10:08:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-10 10:08:00] 
[2025-12-10 10:08:00] 2025-12-10 18:07:03,427 | INFO     | ***************************************
[2025-12-10 10:08:00] 2025-12-10 18:07:03,929 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc538/slots/5
[2025-12-10 10:08:00] 2025-12-10 18:07:03,961 | INFO     | sufficient remaining disk space (190357438464 B)
[2025-12-10 10:08:00] 2025-12-10 18:07:03,961 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-10 10:08:00] 2025-12-10 18:07:03,962 | INFO     | current server update state: UPDATING_FINAL
[2025-12-10 10:08:00] 2025-12-10 18:07:03,962 | INFO     | update_server=False
[2025-12-10 10:08:00] 2025-12-10 18:07:03,962 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-10 10:08:00] 2025-12-10 18:07:03,965 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-10 10:08:00] 2025-12-10 18:07:04,036 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-10 10:08:00] 2025-12-10 18:07:04,036 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-10 10:08:00] 2025-12-10 18:07:04,036 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-10 10:08:00] 2025-12-10 18:07:04,036 | INFO     | will abort loop
[2025-12-10 10:08:00] 2025-12-10 18:07:04,113 | INFO     | all payload control threads have been joined
[2025-12-10 10:08:00] 2025-12-10 18:07:04,161 | INFO     | all data control threads have been joined
[2025-12-10 10:08:00] 2025-12-10 18:07:04,967 | INFO     | [job] retrieve thread has finished
[2025-12-10 10:08:00] 2025-12-10 18:07:05,041 | INFO     | [job] job monitor thread has finished
[2025-12-10 10:08:00] 2025-12-10 18:07:05,061 | INFO     | [payload] failed_post thread has finished
[2025-12-10 10:08:00] 2025-12-10 18:07:05,118 | INFO     | [payload] control thread has finished
[2025-12-10 10:08:00] 2025-12-10 18:07:05,147 | INFO     | all job control threads have been joined
[2025-12-10 10:08:00] 2025-12-10 18:07:05,166 | INFO     | [data] control thread has finished
[2025-12-10 10:08:00] 2025-12-10 18:07:05,235 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-10 10:08:00] 2025-12-10 18:07:05,855 | INFO     | [payload] validate_pre thread has finished
[2025-12-10 10:08:00] 2025-12-10 18:07:05,885 | INFO     | [data] copytool_in thread has finished
[2025-12-10 10:08:00] 2025-12-10 18:07:05,896 | INFO     | [payload] validate_post thread has finished
[2025-12-10 10:08:00] 2025-12-10 18:07:05,920 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-10 10:08:00] 2025-12-10 18:07:05,970 | INFO     | [data] copytool_out thread has finished
[2025-12-10 10:08:00] 2025-12-10 18:07:05,986 | INFO     | [job] create_data_payload thread has finished
[2025-12-10 10:08:00] 2025-12-10 18:07:06,152 | INFO     | [job] control thread has finished
[2025-12-10 10:08:00] 2025-12-10 18:07:06,256 | INFO     | [job] validate thread has finished
[2025-12-10 10:08:00] 2025-12-10 18:07:06,313 | INFO     | [payload] execute_payloads thread has finished
[2025-12-10 10:08:00] 2025-12-10 18:07:06,893 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-10 10:08:00] 2025-12-10 18:07:07,898 | INFO     | [job] queue monitor thread has finished
[2025-12-10 10:08:00] 2025-12-10 18:07:09,240 | INFO     | [data] queue_monitor thread has finished
[2025-12-10 10:08:00] 2025-12-10 18:07:34,480 | INFO     | PID=2696233 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-10 10:08:00] 2025-12-10 18:07:34,480 | INFO     | .. there are 14 such processes running
[2025-12-10 10:08:00] 2025-12-10 18:07:34,481 | INFO     | found 0 job(s) in 20 queues
[2025-12-10 10:08:00] 2025-12-10 18:07:34,481 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-10 10:08:00] 2025-12-10 18:07:34,481 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-10 10:08:00] 2025-12-10 18:07:54,116 | INFO     | [monitor] cgroup control has ended
[2025-12-10 10:08:00] 2025-12-10 18:07:55,008 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126726190974784)>', '<ExcThread(monitor, started 126725543417600)>']
[2025-12-10 10:08:00] 2025-12-10 18:07:55,592 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-10 10:08:00] 2025-12-10 18:07:55,592 | INFO     | [monitor] control thread has ended
[2025-12-10 10:08:00] 2025-12-10 18:08:00,033 | INFO     | all workflow threads have been joined
[2025-12-10 10:08:00] 2025-12-10 18:08:00,033 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-10 10:08:00] 2025-12-10 18:08:00,033 | INFO     | traces error code: 0
[2025-12-10 10:08:00] 2025-12-10 18:08:00,033 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-10 10:08:00] 2025-12-10 18:08:00,142 [wrapper] ==== pilot stdout END ====
[2025-12-10 10:08:00] 2025-12-10 18:08:00,147 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-10 10:08:00] 2025-12-10 18:08:00,148 [wrapper] pilotpid: 2696233
[2025-12-10 10:08:00] 2025-12-10 18:08:00,154 [wrapper] Pilot exit status: 0
[2025-12-10 10:08:00] 2025-12-10 18:08:00,200 [wrapper] pandaids: 6895380388
[2025-12-10 10:08:00] 2025-12-10 18:08:00,299 [wrapper] cleanup supervisor_pilot   38400 2696234
[2025-12-10 10:08:00] 2025-12-10 18:08:00,301 [wrapper] Test setup, not cleaning
[2025-12-10 10:08:00] 2025-12-10 18:08:00,303 [wrapper] apfmon messages muted
[2025-12-10 10:08:00] 2025-12-10 18:08:00,305 [wrapper] ==== wrapper stdout END ====
[2025-12-10 10:08:00] 2025-12-10 18:08:00,307 [wrapper] ==== wrapper stderr END ====
[2025-12-10 10:08:00]  *** Error codes and diagnostics ***
[2025-12-10 10:08:00]     "exeErrorCode": 0,
[2025-12-10 10:08:00]     "exeErrorDiag": "",
[2025-12-10 10:08:00]     "pilotErrorCode": 0,
[2025-12-10 10:08:00]     "pilotErrorDiag": "",
[2025-12-10 10:08:00]  *** Listing of results directory ***
[2025-12-10 10:08:00] total 1326520
[2025-12-10 10:08:00] -rw-r--r-- 1 root root    576529 Nov 23 18:53 pilot3.tar.gz
[2025-12-10 10:08:00] -rw-r--r-- 1 root root      5112 Nov 23 18:59 queuedata.json
[2025-12-10 10:08:00] -rwx------ 1 4871 1028     36292 Nov 23 18:59 runpilot2-wrapper.sh
[2025-12-10 10:08:00] -rw-r--r-- 1 root root       100 Dec  9 17:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-10 10:08:00] -rwxr-xr-x 1 root root      7986 Dec  9 17:15 run_atlas
[2025-12-10 10:08:00] -rw-r--r-- 1 root root       105 Dec  9 17:15 job.xml
[2025-12-10 10:08:00] -rw-r--r-- 1 root root      7075 Dec  9 17:15 init_data.xml
[2025-12-10 10:08:00] -rw-r--r-- 2 root root 413546515 Dec  9 17:15 EVNT.47483658._000991.pool.root.1
[2025-12-10 10:08:00] -rw-r--r-- 2 root root     15847 Dec  9 17:15 start_atlas.sh
[2025-12-10 10:08:00] drwxrwx--x 2 root root      4096 Dec  9 17:15 shared
[2025-12-10 10:08:00] -rw-r--r-- 2 root root    590100 Dec  9 17:15 input.tar.gz
[2025-12-10 10:08:00] -rw-r--r-- 1 root root         0 Dec  9 17:15 boinc_lockfile
[2025-12-10 10:08:00] -rw-r--r-- 1 root root      2785 Dec  9 17:15 pandaJob.out
[2025-12-10 10:08:00] -rw------- 1 root root    979199 Dec  9 17:16 agis_schedconf.cvmfs.json
[2025-12-10 10:08:00] drwxr-xr-x 5  320  320      4096 Dec  9 17:16 pilot3
[2025-12-10 10:08:00] -rw-r--r-- 1 root root       532 Dec 10 10:00 boinc_task_state.xml
[2025-12-10 10:08:00] -rw------- 1 root root 918950676 Dec 10 10:06 HITS.47556137._009772.pool.root.1
[2025-12-10 10:08:00] -rw------- 1 root root      1050 Dec 10 10:06 memory_monitor_summary.json
[2025-12-10 10:08:00] -rw------- 1 root root   1516240 Dec 10 10:06 agis_ddmendpoints.agis.ALL.json
[2025-12-10 10:08:00] -rw------- 1 root root   2358277 Dec 10 10:06 log.47556137._009772.job.log.tgz.1
[2025-12-10 10:08:00] -rw------- 1 root root      8612 Dec 10 10:07 heartbeat.json
[2025-12-10 10:08:00] -rw------- 1 root root        95 Dec 10 10:07 pilot_heartbeat.json
[2025-12-10 10:08:00] -rw-r--r-- 1 root root        29 Dec 10 10:07 wrapper_checkpoint.txt
[2025-12-10 10:08:00] -rw-r--r-- 1 root root      8192 Dec 10 10:07 boinc_mmap_file
[2025-12-10 10:08:00] -rw------- 1 root root      5025 Dec 10 10:08 pilotlog.txt
[2025-12-10 10:08:00] -rw------- 1 root root   8616627 Dec 10 10:08 log.47556137._009772.job.log.1
[2025-12-10 10:08:00] -rw------- 1 root root       353 Dec 10 10:08 output.list
[2025-12-10 10:08:00] -rw-r--r-- 1 root root       620 Dec 10 10:08 runtime_log
[2025-12-10 10:08:00] -rw------- 1 root root  10997760 Dec 10 10:08 result.tar.gz
[2025-12-10 10:08:00] -rw-r--r-- 1 root root      9021 Dec 10 10:08 runtime_log.err
[2025-12-10 10:08:00] -rw------- 1 root root       662 Dec 10 10:08 3aCNDmrybh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm6MLKDmKxVLOo.diag
[2025-12-10 10:08:00] -rw-r--r-- 1 root root     21394 Dec 10 10:08 stderr.txt
[2025-12-10 10:08:00] HITS file was successfully produced:
[2025-12-10 10:08:00] -rw------- 1 root root 918950676 Dec 10 10:06 shared/HITS.pool.root.1
[2025-12-10 10:08:00]  *** Contents of shared directory: ***
[2025-12-10 10:08:00] total 1312616
[2025-12-10 10:08:00] -rw-r--r-- 2 root root 413546515 Dec  9 17:15 ATLAS.root_0
[2025-12-10 10:08:00] -rw-r--r-- 2 root root     15847 Dec  9 17:15 start_atlas.sh
[2025-12-10 10:08:00] -rw-r--r-- 2 root root    590100 Dec  9 17:15 input.tar.gz
[2025-12-10 10:08:00] -rw------- 1 root root 918950676 Dec 10 10:06 HITS.pool.root.1
[2025-12-10 10:08:00] -rw------- 1 root root  10997760 Dec 10 10:08 result.tar.gz
10:08:01 (2688495): run_atlas exited; CPU time 136620.402718
10:08:01 (2688495): called boinc_finish(0)

</stderr_txt>
]]>

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