Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
07:30:54 (1856582): wrapper (7.7.26015): starting
07:30:54 (1856582): wrapper: running run_atlas (--nthreads 10)
[2025-12-09 07:30:55] Arguments: --nthreads 10
[2025-12-09 07:30:55] Threads: 10
[2025-12-09 07:30:55] Checking for CVMFS
[2025-12-09 07:30:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-09 07:30:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-09 07:30:55] Running cvmfs_config stat atlas.cern.ch
[2025-12-09 07:30:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-09 07:30:55] 2.13.3.0 11319 4347 68268 153810 0 110 2733360 4096001 11689 130560 0 630455858 100.000 248338 596 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-12-09 07:30:55] CVMFS is ok
[2025-12-09 07:30:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-09 07:30:55] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-09 07:30:55] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-09 07:30:55] Further information can be found at the LHC@home message board.
[2025-12-09 07:30:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-09 07:30:55] Checking for apptainer binary...
[2025-12-09 07:30:55] apptainer is not installed, using version from CVMFS
[2025-12-09 07:30:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-09 07:30:55] 7950x-linux
[2025-12-09 07:30:55] apptainer works
[2025-12-09 07:30:55] Set ATHENA_PROC_NUMBER=10
[2025-12-09 07:30:55] Set ATHENA_CORE_NUMBER=10
[2025-12-09 07:30:55] Starting ATLAS job with PandaID=6895381202
[2025-12-09 07:30:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc538/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-10 01:09:01]  *** The last 200 lines of the pilot log: ***
[2025-12-10 01:09:01] 2025-12-10 09:08:27,794 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3999.99246875
[2025-12-10 01:09:01] 2025-12-10 09:08:27,797 | INFO     | using path: /var/lib/multiboinc/boinc538/slots/1/PanDA_Pilot-6895381202/memory_monitor_summary.json (trf name=prmon)
[2025-12-10 01:09:01] 2025-12-10 09:08:27,797 | INFO     | extracted standard info from prmon json
[2025-12-10 01:09:01] 2025-12-10 09:08:27,797 | INFO     | extracted standard memory fields from prmon json
[2025-12-10 01:09:01] 2025-12-10 09:08:27,797 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-10 01:09:01] 2025-12-10 09:08:27,808 | INFO     | fitting pss+swap vs Time
[2025-12-10 01:09:01] 2025-12-10 09:08:27,809 | INFO     | sum of square deviations: 348801136445.92206
[2025-12-10 01:09:01] 2025-12-10 09:08:27,821 | INFO     | sum of deviations: 2365978810207.346
[2025-12-10 01:09:01] 2025-12-10 09:08:27,821 | INFO     | mean x: 1765325987.5086539
[2025-12-10 01:09:01] 2025-12-10 09:08:27,821 | INFO     | mean y: 3173513.073076923
[2025-12-10 01:09:01] 2025-12-10 09:08:27,822 | INFO     | intersect: -11971339879.03392
[2025-12-10 01:09:01] 2025-12-10 09:08:27,822 | INFO     | chi2: 4.834091795785236
[2025-12-10 01:09:01] 2025-12-10 09:08:27,823 | INFO     | sum of square deviations: 343794496480.92053
[2025-12-10 01:09:01] 2025-12-10 09:08:27,834 | INFO     | sum of deviations: 2686933100480.2246
[2025-12-10 01:09:01] 2025-12-10 09:08:27,835 | INFO     | mean x: 1765325835.0086956
[2025-12-10 01:09:01] 2025-12-10 09:08:27,835 | INFO     | mean y: 3183278.6415458936
[2025-12-10 01:09:01] 2025-12-10 09:08:27,835 | INFO     | intersect: -13793757823.587513
[2025-12-10 01:09:01] 2025-12-10 09:08:27,835 | INFO     | chi2: 2.256787356565058
[2025-12-10 01:09:01] 2025-12-10 09:08:27,835 | INFO     | current chi2=2.256787356565058 (change=53.31517373061237 %)
[2025-12-10 01:09:01] 2025-12-10 09:08:27,836 | INFO     | sum of square deviations: 338835996953.42126
[2025-12-10 01:09:01] 2025-12-10 09:08:27,848 | INFO     | sum of deviations: 2683587132630.1543
[2025-12-10 01:09:01] 2025-12-10 09:08:27,848 | INFO     | mean x: 1765325682.5087378
[2025-12-10 01:09:01] 2025-12-10 09:08:27,848 | INFO     | mean y: 3183173.37184466
[2025-12-10 01:09:01] 2025-12-10 09:08:27,848 | INFO     | intersect: -13978227683.436352
[2025-12-10 01:09:01] 2025-12-10 09:08:27,848 | INFO     | chi2: 2.2171228783641137
[2025-12-10 01:09:01] 2025-12-10 09:08:27,849 | INFO     | current chi2=2.2171228783641137 (change=1.7575638256550503 %)
[2025-12-10 01:09:01] 2025-12-10 09:08:27,849 | INFO     | right removable region: 1029
[2025-12-10 01:09:01] 2025-12-10 09:08:27,849 | INFO     | sum of square deviations: 343794490990.92053
[2025-12-10 01:09:01] 2025-12-10 09:08:27,865 | INFO     | sum of deviations: 2086866645803.6
[2025-12-10 01:09:01] 2025-12-10 09:08:27,865 | INFO     | mean x: 1765326140.0086956
[2025-12-10 01:09:01] 2025-12-10 09:08:27,865 | INFO     | mean y: 3182002.3777777776
[2025-12-10 01:09:01] 2025-12-10 09:08:27,865 | INFO     | intersect: -10712522690.652502
[2025-12-10 01:09:01] 2025-12-10 09:08:27,865 | INFO     | chi2: 2.946514428121484
[2025-12-10 01:09:01] 2025-12-10 09:08:27,865 | INFO     | current chi2=2.946514428121484 (change=39.047197434469474 %)
[2025-12-10 01:09:01] 2025-12-10 09:08:27,866 | INFO     | sum of square deviations: 338835985973.4213
[2025-12-10 01:09:01] 2025-12-10 09:08:27,878 | INFO     | sum of deviations: 1994388979555.4014
[2025-12-10 01:09:01] 2025-12-10 09:08:27,878 | INFO     | mean x: 1765326292.5087378
[2025-12-10 01:09:01] 2025-12-10 09:08:27,878 | INFO     | mean y: 3184845.9553398057
[2025-12-10 01:09:01] 2025-12-10 09:08:27,878 | INFO     | intersect: -10387527619.204702
[2025-12-10 01:09:01] 2025-12-10 09:08:27,878 | INFO     | chi2: 2.8641321068929098
[2025-12-10 01:09:01] 2025-12-10 09:08:27,879 | INFO     | current chi2=2.8641321068929098 (change=2.7959245826974026 %)
[2025-12-10 01:09:01] 2025-12-10 09:08:27,879 | INFO     | left removable region: 20
[2025-12-10 01:09:01] 2025-12-10 09:08:27,879 | INFO     | sum of square deviations: 318530722084.9193
[2025-12-10 01:09:01] 2025-12-10 09:08:27,890 | INFO     | sum of deviations: 2177726586125.9448
[2025-12-10 01:09:01] 2025-12-10 09:08:27,890 | INFO     | mean x: 1765326262.0089197
[2025-12-10 01:09:01] 2025-12-10 09:08:27,890 | INFO     | mean y: 3198706.8949454906
[2025-12-10 01:09:01] 2025-12-10 09:08:27,890 | INFO     | intersect: -12065960301.69279
[2025-12-10 01:09:01] 2025-12-10 09:08:27,891 | INFO     | chi2: 0.1866580481626507
[2025-12-10 01:09:01] 2025-12-10 09:08:27,891 | INFO     | current memory leak: 6.84 B/s (using 1009 data points, chi2=0.19)
[2025-12-10 01:09:01] 2025-12-10 09:08:27,892 | INFO     | could have reported an average CPU frequency of 3999 MHz (39 samples)
[2025-12-10 01:09:01] 2025-12-10 09:08:27,892 | INFO     | ..............................
[2025-12-10 01:09:01] 2025-12-10 09:08:27,892 | INFO     | . Timing measurements:
[2025-12-10 01:09:01] 2025-12-10 09:08:27,892 | INFO     | . get job = 0 s
[2025-12-10 01:09:01] 2025-12-10 09:08:27,892 | INFO     | . initial setup = 3 s
[2025-12-10 01:09:01] 2025-12-10 09:08:27,892 | INFO     | . payload setup = 6 s
[2025-12-10 01:09:01] 2025-12-10 09:08:27,892 | INFO     | . stage-in = 0 s
[2025-12-10 01:09:01] 2025-12-10 09:08:27,892 | INFO     | . payload execution = 63397 s
[2025-12-10 01:09:01] 2025-12-10 09:08:27,892 | INFO     | . stage-out = 4 s
[2025-12-10 01:09:01] 2025-12-10 09:08:27,892 | INFO     | . log creation = 0 s
[2025-12-10 01:09:01] 2025-12-10 09:08:27,892 | INFO     | ..............................
[2025-12-10 01:09:01] 2025-12-10 09:08:27,944 | INFO     | 
[2025-12-10 01:09:01] 2025-12-10 09:08:27,944 | INFO     | job summary report
[2025-12-10 01:09:01] 2025-12-10 09:08:27,944 | INFO     | --------------------------------------------------
[2025-12-10 01:09:01] 2025-12-10 09:08:27,944 | INFO     | PanDA job id: 6895381202
[2025-12-10 01:09:01] 2025-12-10 09:08:27,944 | INFO     | task id: 47556137
[2025-12-10 01:09:01] 2025-12-10 09:08:27,944 | INFO     | errors: (none)
[2025-12-10 01:09:01] 2025-12-10 09:08:27,944 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-10 01:09:01] 2025-12-10 09:08:27,944 | INFO     | pilot state: finished 
[2025-12-10 01:09:01] 2025-12-10 09:08:27,944 | INFO     | transexitcode: 0
[2025-12-10 01:09:01] 2025-12-10 09:08:27,944 | INFO     | exeerrorcode: 0
[2025-12-10 01:09:01] 2025-12-10 09:08:27,944 | INFO     | exeerrordiag: 
[2025-12-10 01:09:01] 2025-12-10 09:08:27,944 | INFO     | exitcode: 0
[2025-12-10 01:09:01] 2025-12-10 09:08:27,944 | INFO     | exitmsg: OK
[2025-12-10 01:09:01] 2025-12-10 09:08:27,944 | INFO     | cpuconsumptiontime: 136648 s
[2025-12-10 01:09:01] 2025-12-10 09:08:27,944 | INFO     | nevents: 1000
[2025-12-10 01:09:01] 2025-12-10 09:08:27,944 | INFO     | neventsw: 0
[2025-12-10 01:09:01] 2025-12-10 09:08:27,944 | INFO     | pid: 1867121
[2025-12-10 01:09:01] 2025-12-10 09:08:27,945 | INFO     | pgrp: 1867121
[2025-12-10 01:09:01] 2025-12-10 09:08:27,945 | INFO     | corecount: 10
[2025-12-10 01:09:01] 2025-12-10 09:08:27,945 | INFO     | event service: False
[2025-12-10 01:09:01] 2025-12-10 09:08:27,945 | INFO     | sizes: {0: 2284051, 1: 2284306, 6: 2284568, 12: 2284596, 63407: 2339351, 63408: 2339350, 63412: 2348556, 63414: 2348612, 63422: 2348636}
[2025-12-10 01:09:01] 2025-12-10 09:08:27,945 | INFO     | --------------------------------------------------
[2025-12-10 01:09:01] 2025-12-10 09:08:27,945 | INFO     | 
[2025-12-10 01:09:01] 2025-12-10 09:08:27,945 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc538/slots/1
[2025-12-10 01:09:01] 2025-12-10 09:08:27,969 | INFO     | time since job start (63439s) is within the limit (172800.0s)
[2025-12-10 01:09:01] 2025-12-10 09:08:27,981 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-10 01:09:01] 2025-12-10 09:08:27,981 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-10 01:09:01] 2025-12-10 09:08:27,981 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-10 01:09:01] 2025-12-10 09:08:27,981 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-10 01:09:01] 2025-12-10 09:08:27,981 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-10 01:09:01] 2025-12-10 09:08:27,981 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-10 01:09:01] 2025-12-10 09:08:27,981 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-10 01:09:01] 2025-12-10 09:08:27,981 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-10 01:09:01] 2025-12-10 09:08:27,981 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-10 01:09:01] 2025-12-10 09:08:27,982 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-10 01:09:01] 2025-12-10 09:08:27,982 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-10 01:09:01] 2025-12-10 09:08:27,982 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-10 01:09:01] 2025-12-10 09:08:27,982 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-10 01:09:01] 2025-12-10 09:08:27,982 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-10 01:09:01] 2025-12-10 09:08:27,982 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-10 01:09:01] 2025-12-10 09:08:27,982 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-10 01:09:01] 2025-12-10 09:08:27,982 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-10 01:09:01] 2025-12-10 09:08:27,982 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-10 01:09:01] 2025-12-10 09:08:27,982 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-10 01:09:01] 2025-12-10 09:08:27,982 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-10 01:09:01] 2025-12-10 09:08:27,982 | INFO     | job 6895381202 has completed (purged errors)
[2025-12-10 01:09:01] 2025-12-10 09:08:27,982 | INFO     | overall cleanup function is called
[2025-12-10 01:09:01] 2025-12-10 09:08:29,001 | INFO     | --- collectZombieJob: --- 10, [1867121]
[2025-12-10 01:09:01] 2025-12-10 09:08:29,001 | INFO     | zombie collector waiting for pid 1867121
[2025-12-10 01:09:01] 2025-12-10 09:08:29,001 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-10 01:09:01] 2025-12-10 09:08:29,001 | INFO     | collected zombie processes
[2025-12-10 01:09:01] 2025-12-10 09:08:29,001 | INFO     | will attempt to kill all subprocesses of pid=1867121
[2025-12-10 01:09:01] 2025-12-10 09:08:29,414 | INFO     | process IDs to be killed: [1867121] (in reverse order)
[2025-12-10 01:09:01] 2025-12-10 09:08:29,587 | WARNING  | found no corresponding commands to process id(s)
[2025-12-10 01:09:01] 2025-12-10 09:08:29,588 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-10 01:09:01] 2025-12-10 09:08:29,605 | INFO     | did not find any defunct processes belonging to 1867121
[2025-12-10 01:09:01] 2025-12-10 09:08:29,615 | INFO     | did not find any defunct processes belonging to 1867121
[2025-12-10 01:09:01] 2025-12-10 09:08:29,615 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-10 01:09:01] 2025-12-10 09:08:29,616 | INFO     | ready for new job
[2025-12-10 01:09:01] 2025-12-10 09:08:29,616 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-10 01:09:01] 2025-12-10 09:08:29,618 | INFO     | ***************************************
[2025-12-10 01:09:01] 2025-12-10 09:08:29,618 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-10 01:09:01] 2025-12-10 09:08:29,618 | INFO     | ***************************************
[2025-12-10 01:09:01] 2025-12-10 09:08:29,618 | INFO     | 
[2025-12-10 01:09:01] 2025-12-10 09:08:29,620 | INFO     | architecture information:
[2025-12-10 01:09:01] 2025-12-10 09:08:29,620 | INFO     | executing command: cat /etc/os-release
[2025-12-10 01:09:01] 2025-12-10 09:08:29,633 | INFO     | cat /etc/os-release:
[2025-12-10 01:09:01] NAME="CentOS Linux"
[2025-12-10 01:09:01] VERSION="7 (Core)"
[2025-12-10 01:09:01] ID="centos"
[2025-12-10 01:09:01] ID_LIKE="rhel fedora"
[2025-12-10 01:09:01] VERSION_ID="7"
[2025-12-10 01:09:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-10 01:09:01] ANSI_COLOR="0;31"
[2025-12-10 01:09:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-10 01:09:01] HOME_URL="https://www.centos.org/"
[2025-12-10 01:09:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-10 01:09:01] 
[2025-12-10 01:09:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-10 01:09:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-10 01:09:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-10 01:09:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-10 01:09:01] 
[2025-12-10 01:09:01] 2025-12-10 09:08:29,633 | INFO     | ***************************************
[2025-12-10 01:09:01] 2025-12-10 09:08:30,135 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc538/slots/1
[2025-12-10 01:09:01] 2025-12-10 09:08:30,151 | INFO     | sufficient remaining disk space (180654964736 B)
[2025-12-10 01:09:01] 2025-12-10 09:08:30,151 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-10 01:09:01] 2025-12-10 09:08:30,151 | INFO     | current server update state: UPDATING_FINAL
[2025-12-10 01:09:01] 2025-12-10 09:08:30,151 | INFO     | update_server=False
[2025-12-10 01:09:01] 2025-12-10 09:08:30,152 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-10 01:09:01] 2025-12-10 09:08:30,224 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-10 01:09:01] 2025-12-10 09:08:30,443 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-10 01:09:01] 2025-12-10 09:08:30,465 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-10 01:09:01] 2025-12-10 09:08:30,465 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-10 01:09:01] 2025-12-10 09:08:30,465 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-10 01:09:01] 2025-12-10 09:08:30,465 | INFO     | will abort loop
[2025-12-10 01:09:01] 2025-12-10 09:08:30,549 | INFO     | all payload control threads have been joined
[2025-12-10 01:09:01] 2025-12-10 09:08:30,696 | INFO     | all job control threads have been joined
[2025-12-10 01:09:01] 2025-12-10 09:08:31,094 | INFO     | all data control threads have been joined
[2025-12-10 01:09:01] 2025-12-10 09:08:31,156 | INFO     | [job] retrieve thread has finished
[2025-12-10 01:09:01] 2025-12-10 09:08:31,355 | INFO     | [data] copytool_in thread has finished
[2025-12-10 01:09:01] 2025-12-10 09:08:31,470 | INFO     | [job] job monitor thread has finished
[2025-12-10 01:09:01] 2025-12-10 09:08:31,554 | INFO     | [payload] control thread has finished
[2025-12-10 01:09:01] 2025-12-10 09:08:31,615 | INFO     | [payload] validate_pre thread has finished
[2025-12-10 01:09:01] 2025-12-10 09:08:31,701 | INFO     | [job] control thread has finished
[2025-12-10 01:09:01] 2025-12-10 09:08:31,716 | INFO     | [job] validate thread has finished
[2025-12-10 01:09:01] 2025-12-10 09:08:31,775 | INFO     | [payload] validate_post thread has finished
[2025-12-10 01:09:01] 2025-12-10 09:08:32,039 | INFO     | [job] create_data_payload thread has finished
[2025-12-10 01:09:01] 2025-12-10 09:08:32,098 | INFO     | [payload] execute_payloads thread has finished
[2025-12-10 01:09:01] 2025-12-10 09:08:32,099 | INFO     | [data] control thread has finished
[2025-12-10 01:09:01] 2025-12-10 09:08:32,169 | INFO     | [payload] failed_post thread has finished
[2025-12-10 01:09:01] 2025-12-10 09:08:32,448 | INFO     | [data] copytool_out thread has finished
[2025-12-10 01:09:01] 2025-12-10 09:08:32,954 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-10 01:09:01] 2025-12-10 09:08:33,959 | INFO     | [job] queue monitor thread has finished
[2025-12-10 01:09:01] 2025-12-10 09:08:34,229 | INFO     | [data] queue_monitor thread has finished
[2025-12-10 01:09:01] 2025-12-10 09:08:41,173 | INFO     | job.realtimelogging is not enabled
[2025-12-10 01:09:01] 2025-12-10 09:08:42,178 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-10 01:09:01] 2025-12-10 09:08:54,014 | INFO     | [monitor] cgroup control has ended
[2025-12-10 01:09:01] 2025-12-10 09:08:54,682 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125302368757568)>', '<ExcThread(monitor, started 125301644326656)>']
[2025-12-10 01:09:01] 2025-12-10 09:08:59,707 | INFO     | all workflow threads have been joined
[2025-12-10 01:09:01] 2025-12-10 09:08:59,707 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-10 01:09:01] 2025-12-10 09:08:59,707 | INFO     | traces error code: 0
[2025-12-10 01:09:01] 2025-12-10 09:08:59,707 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-10 01:09:01] 2025-12-10 09:09:01,321 | INFO     | PID=1860429 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-10 01:09:01] 2025-12-10 09:09:01,321 | INFO     | .. there are 14 such processes running
[2025-12-10 01:09:01] 2025-12-10 09:09:01,322 | INFO     | found 0 job(s) in 20 queues
[2025-12-10 01:09:01] 2025-12-10 09:09:01,322 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-10 01:09:01] 2025-12-10 09:09:01,322 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-10 01:09:01] 2025-12-10 09:09:01,322 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-10 01:09:01] 2025-12-10 09:09:01,322 | INFO     | [monitor] control thread has ended
[2025-12-10 01:09:01] 2025-12-10 09:09:01,420 [wrapper] ==== pilot stdout END ====
[2025-12-10 01:09:01] 2025-12-10 09:09:01,422 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-10 01:09:01] 2025-12-10 09:09:01,423 [wrapper] pilotpid: 1860429
[2025-12-10 01:09:01] 2025-12-10 09:09:01,426 [wrapper] Pilot exit status: 0
[2025-12-10 01:09:01] 2025-12-10 09:09:01,436 [wrapper] pandaids: 6895381202
[2025-12-10 01:09:01] 2025-12-10 09:09:01,508 [wrapper] cleanup supervisor_pilot 3354682 1860430
[2025-12-10 01:09:01] 2025-12-10 09:09:01,510 [wrapper] Test setup, not cleaning
[2025-12-10 01:09:01] 2025-12-10 09:09:01,512 [wrapper] apfmon messages muted
[2025-12-10 01:09:01] 2025-12-10 09:09:01,514 [wrapper] ==== wrapper stdout END ====
[2025-12-10 01:09:01] 2025-12-10 09:09:01,515 [wrapper] ==== wrapper stderr END ====
[2025-12-10 01:09:01]  *** Error codes and diagnostics ***
[2025-12-10 01:09:01]     "exeErrorCode": 0,
[2025-12-10 01:09:01]     "exeErrorDiag": "",
[2025-12-10 01:09:01]     "pilotErrorCode": 0,
[2025-12-10 01:09:01]     "pilotErrorDiag": "",
[2025-12-10 01:09:01]  *** Listing of results directory ***
[2025-12-10 01:09:01] total 1326796
[2025-12-10 01:09:01] -rw-r--r-- 1 root root    576529 Nov 23 18:53 pilot3.tar.gz
[2025-12-10 01:09:01] -rw-r--r-- 1 root root      5112 Nov 23 19:12 queuedata.json
[2025-12-10 01:09:01] -rwx------ 1 4871 1028     36292 Nov 23 19:13 runpilot2-wrapper.sh
[2025-12-10 01:09:01] -rw-r--r-- 1 root root       100 Dec  9 07:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-10 01:09:01] -rwxr-xr-x 1 root root      7986 Dec  9 07:30 run_atlas
[2025-12-10 01:09:01] -rw-r--r-- 1 root root       105 Dec  9 07:30 job.xml
[2025-12-10 01:09:01] -rw-r--r-- 2 root root 408397052 Dec  9 07:30 EVNT.47483658._000994.pool.root.1
[2025-12-10 01:09:01] drwxrwx--x 2 root root      4096 Dec  9 07:30 shared
[2025-12-10 01:09:01] -rw-r--r-- 2 root root    590105 Dec  9 07:30 input.tar.gz
[2025-12-10 01:09:01] -rw-r--r-- 2 root root     15847 Dec  9 07:30 start_atlas.sh
[2025-12-10 01:09:01] -rw-r--r-- 1 root root         0 Dec  9 07:30 boinc_lockfile
[2025-12-10 01:09:01] -rw-r--r-- 1 root root      2785 Dec  9 07:30 pandaJob.out
[2025-12-10 01:09:01] -rw------- 1 root root    978919 Dec  9 07:31 agis_schedconf.cvmfs.json
[2025-12-10 01:09:01] drwxr-xr-x 5  320  320      4096 Dec  9 07:31 pilot3
[2025-12-10 01:09:01] -rw-r--r-- 1 root root      7083 Dec  9 17:14 init_data.xml
[2025-12-10 01:09:01] -rw-r--r-- 1 root root       533 Dec 10 01:01 boinc_task_state.xml
[2025-12-10 01:09:01] -rw------- 1 root root 923546536 Dec 10 01:07 HITS.47556137._009806.pool.root.1
[2025-12-10 01:09:01] -rw------- 1 root root        95 Dec 10 01:08 pilot_heartbeat.json
[2025-12-10 01:09:01] -rw------- 1 root root      1055 Dec 10 01:08 memory_monitor_summary.json
[2025-12-10 01:09:01] -rw------- 1 root root   1516240 Dec 10 01:08 agis_ddmendpoints.agis.ALL.json
[2025-12-10 01:09:01] -rw------- 1 root root   2395199 Dec 10 01:08 log.47556137._009806.job.log.tgz.1
[2025-12-10 01:09:01] -rw------- 1 root root      8610 Dec 10 01:08 heartbeat.json
[2025-12-10 01:09:01] -rw-r--r-- 1 root root        29 Dec 10 01:08 wrapper_checkpoint.txt
[2025-12-10 01:09:01] -rw-r--r-- 1 root root      8192 Dec 10 01:08 boinc_mmap_file
[2025-12-10 01:09:01] -rw------- 1 root root       823 Dec 10 01:09 pilotlog.txt
[2025-12-10 01:09:01] -rw------- 1 root root   9001337 Dec 10 01:09 log.47556137._009806.job.log.1
[2025-12-10 01:09:01] -rw------- 1 root root       353 Dec 10 01:09 output.list
[2025-12-10 01:09:01] -rw-r--r-- 1 root root       620 Dec 10 01:09 runtime_log
[2025-12-10 01:09:01] -rw------- 1 root root  11417600 Dec 10 01:09 result.tar.gz
[2025-12-10 01:09:01] -rw------- 1 root root       663 Dec 10 01:09 vauKDmrBch8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmvNLKDm9gcm5m.diag
[2025-12-10 01:09:01] -rw-r--r-- 1 root root      9021 Dec 10 01:09 runtime_log.err
[2025-12-10 01:09:01] -rw-r--r-- 1 root root     21469 Dec 10 01:09 stderr.txt
[2025-12-10 01:09:01] HITS file was successfully produced:
[2025-12-10 01:09:01] -rw------- 1 root root 923546536 Dec 10 01:07 shared/HITS.pool.root.1
[2025-12-10 01:09:01]  *** Contents of shared directory: ***
[2025-12-10 01:09:01] total 1312488
[2025-12-10 01:09:01] -rw-r--r-- 2 root root 408397052 Dec  9 07:30 ATLAS.root_0
[2025-12-10 01:09:01] -rw-r--r-- 2 root root    590105 Dec  9 07:30 input.tar.gz
[2025-12-10 01:09:01] -rw-r--r-- 2 root root     15847 Dec  9 07:30 start_atlas.sh
[2025-12-10 01:09:01] -rw------- 1 root root 923546536 Dec 10 01:07 HITS.pool.root.1
[2025-12-10 01:09:01] -rw------- 1 root root  11417600 Dec 10 01:09 result.tar.gz
01:09:03 (1856582): run_atlas exited; CPU time 136886.601222
01:09:03 (1856582): called boinc_finish(0)

</stderr_txt>
]]>

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