Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
13:33:09 (289563): wrapper (7.7.26015): starting
13:33:09 (289563): wrapper: running run_atlas (--nthreads 10)
[2025-12-09 13:33:09] Arguments: --nthreads 10
[2025-12-09 13:33:09] Threads: 10
[2025-12-09 13:33:09] Checking for CVMFS
[2025-12-09 13:33:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-09 13:33:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-09 13:33:10] Running cvmfs_config stat atlas.cern.ch
[2025-12-09 13:33:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-09 13:33:10] 2.13.3.0 8606 11753 65056 153818 2 101 2081182 4096000 5900 130560 0 37404960 99.976 1126699 686 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-12-09 13:33:10] CVMFS is ok
[2025-12-09 13:33:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-09 13:33:10] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-09 13:33:10] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-09 13:33:10] Further information can be found at the LHC@home message board.
[2025-12-09 13:33:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-09 13:33:10] Checking for apptainer binary...
[2025-12-09 13:33:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-09 13:33:10] Running /usr/bin/apptainer --version
[2025-12-09 13:33:10] apptainer version 1.4.2
[2025-12-09 13:33:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-09 13:33:11] 3950x-linux
[2025-12-09 13:33:11] apptainer works
[2025-12-09 13:33:11] Set ATHENA_PROC_NUMBER=10
[2025-12-09 13:33:11] Set ATHENA_CORE_NUMBER=10
[2025-12-09 13:33:11] Starting ATLAS job with PandaID=6893862594
[2025-12-09 13:33:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc242/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-10 01:19:53]  *** The last 200 lines of the pilot log: ***
[2025-12-10 01:19:53] 2025-12-10 09:18:47,654 | INFO     | time since job start (42311s) is within the limit (172800.0s)
[2025-12-10 01:19:53] 2025-12-10 09:18:48,783 | INFO     | PID=293447 has CPU usage=12.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-10 01:19:53] 2025-12-10 09:18:48,783 | INFO     | .. there are 3 such processes running
[2025-12-10 01:19:53] 2025-12-10 09:18:49,089 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-10 01:19:53] 2025-12-10 09:18:49,093 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 2975.08096875
[2025-12-10 01:19:53] 2025-12-10 09:18:49,098 | INFO     | using path: /var/lib/multiboinc/boinc242/slots/3/PanDA_Pilot-6893862594/memory_monitor_summary.json (trf name=prmon)
[2025-12-10 01:19:53] 2025-12-10 09:18:49,099 | INFO     | extracted standard info from prmon json
[2025-12-10 01:19:53] 2025-12-10 09:18:49,099 | INFO     | extracted standard memory fields from prmon json
[2025-12-10 01:19:53] 2025-12-10 09:18:49,099 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-10 01:19:53] 2025-12-10 09:18:49,108 | INFO     | fitting pss+swap vs Time
[2025-12-10 01:19:53] 2025-12-10 09:18:49,109 | INFO     | sum of square deviations: 103190340601.91548
[2025-12-10 01:19:53] 2025-12-10 09:18:49,118 | INFO     | sum of deviations: 1056367827968.2766
[2025-12-10 01:19:53] 2025-12-10 09:18:49,118 | INFO     | mean x: 1765337172.165945
[2025-12-10 01:19:53] 2025-12-10 09:18:49,118 | INFO     | mean y: 3118522.8845598847
[2025-12-10 01:19:53] 2025-12-10 09:18:49,118 | INFO     | intersect: -18068780293.563213
[2025-12-10 01:19:53] 2025-12-10 09:18:49,119 | INFO     | chi2: 6.087729551177871
[2025-12-10 01:19:53] 2025-12-10 09:18:49,119 | INFO     | sum of square deviations: 100973119593.28929
[2025-12-10 01:19:53] 2025-12-10 09:18:49,129 | INFO     | sum of deviations: 1275355871582.3083
[2025-12-10 01:19:53] 2025-12-10 09:18:49,129 | INFO     | mean x: 1765337019.6816862
[2025-12-10 01:19:53] 2025-12-10 09:18:49,129 | INFO     | mean y: 3133571.3895348837
[2025-12-10 01:19:53] 2025-12-10 09:18:49,129 | INFO     | intersect: -22294215885.983105
[2025-12-10 01:19:53] 2025-12-10 09:18:49,130 | INFO     | chi2: 3.518429569208215
[2025-12-10 01:19:53] 2025-12-10 09:18:49,130 | INFO     | current chi2=3.518429569208215 (change=42.20456839237447 %)
[2025-12-10 01:19:53] 2025-12-10 09:18:49,130 | INFO     | sum of square deviations: 98787857463.7101
[2025-12-10 01:19:53] 2025-12-10 09:18:49,139 | INFO     | sum of deviations: 1334593990108.4836
[2025-12-10 01:19:53] 2025-12-10 09:18:49,140 | INFO     | mean x: 1765336867.1961932
[2025-12-10 01:19:53] 2025-12-10 09:18:49,140 | INFO     | mean y: 3137688.3396778917
[2025-12-10 01:19:53] 2025-12-10 09:18:49,140 | INFO     | intersect: -23846027927.40881
[2025-12-10 01:19:53] 2025-12-10 09:18:49,140 | INFO     | chi2: 3.0880321770622987
[2025-12-10 01:19:53] 2025-12-10 09:18:49,140 | INFO     | current chi2=3.0880321770622987 (change=12.232656180262055 %)
[2025-12-10 01:19:53] 2025-12-10 09:18:49,140 | INFO     | right removable region: 682
[2025-12-10 01:19:53] 2025-12-10 09:18:49,141 | INFO     | sum of square deviations: 100972203983.28934
[2025-12-10 01:19:53] 2025-12-10 09:18:49,150 | INFO     | sum of deviations: 812353235499.169
[2025-12-10 01:19:53] 2025-12-10 09:18:49,150 | INFO     | mean x: 1765337324.6816862
[2025-12-10 01:19:53] 2025-12-10 09:18:49,151 | INFO     | mean y: 3135288.854651163
[2025-12-10 01:19:53] 2025-12-10 09:18:49,151 | INFO     | intersect: -14199560412.330114
[2025-12-10 01:19:53] 2025-12-10 09:18:49,151 | INFO     | chi2: 3.358233560669016
[2025-12-10 01:19:53] 2025-12-10 09:18:49,151 | INFO     | current chi2=3.358233560669016 (change=44.83602577221494 %)
[2025-12-10 01:19:53] 2025-12-10 09:18:49,152 | INFO     | sum of square deviations: 98786445328.75575
[2025-12-10 01:19:53] 2025-12-10 09:18:49,161 | INFO     | sum of deviations: 736665780373.0955
[2025-12-10 01:19:53] 2025-12-10 09:18:49,161 | INFO     | mean x: 1765337477.1844802
[2025-12-10 01:19:53] 2025-12-10 09:18:49,161 | INFO     | mean y: 3140559.1976573938
[2025-12-10 01:19:53] 2025-12-10 09:18:49,161 | INFO     | intersect: -13161253664.36314
[2025-12-10 01:19:53] 2025-12-10 09:18:49,162 | INFO     | chi2: 3.0868176881157536
[2025-12-10 01:19:53] 2025-12-10 09:18:49,162 | INFO     | current chi2=3.0868176881157536 (change=8.082102321054517 %)
[2025-12-10 01:19:53] 2025-12-10 09:18:49,162 | INFO     | left removable region: 20
[2025-12-10 01:19:53] 2025-12-10 09:18:49,163 | INFO     | sum of square deviations: 89951707644.17644
[2025-12-10 01:19:53] 2025-12-10 09:18:49,171 | INFO     | sum of deviations: 951406964109.3058
[2025-12-10 01:19:53] 2025-12-10 09:18:49,172 | INFO     | mean x: 1765337446.7175226
[2025-12-10 01:19:53] 2025-12-10 09:18:49,172 | INFO     | mean y: 3164464.7235649545
[2025-12-10 01:19:53] 2025-12-10 09:18:49,172 | INFO     | intersect: -18668569344.420277
[2025-12-10 01:19:53] 2025-12-10 09:18:49,172 | INFO     | chi2: 0.04662797644796224
[2025-12-10 01:19:53] 2025-12-10 09:18:49,172 | INFO     | current memory leak: 10.58 B/s (using 662 data points, chi2=0.05)
[2025-12-10 01:19:53] 2025-12-10 09:18:49,173 | INFO     | could have reported an average CPU frequency of 3382 MHz (27 samples)
[2025-12-10 01:19:53] 2025-12-10 09:18:49,173 | INFO     | ..............................
[2025-12-10 01:19:53] 2025-12-10 09:18:49,173 | INFO     | . Timing measurements:
[2025-12-10 01:19:53] 2025-12-10 09:18:49,173 | INFO     | . get job = 0 s
[2025-12-10 01:19:53] 2025-12-10 09:18:49,173 | INFO     | . initial setup = 4 s
[2025-12-10 01:19:53] 2025-12-10 09:18:49,173 | INFO     | . payload setup = 14 s
[2025-12-10 01:19:53] 2025-12-10 09:18:49,173 | INFO     | . stage-in = 0 s
[2025-12-10 01:19:53] 2025-12-10 09:18:49,173 | INFO     | . payload execution = 42256 s
[2025-12-10 01:19:53] 2025-12-10 09:18:49,173 | INFO     | . stage-out = 4 s
[2025-12-10 01:19:53] 2025-12-10 09:18:49,173 | INFO     | . log creation = 0 s
[2025-12-10 01:19:53] 2025-12-10 09:18:49,174 | INFO     | ..............................
[2025-12-10 01:19:53] 2025-12-10 09:18:49,706 | INFO     | 
[2025-12-10 01:19:53] 2025-12-10 09:18:49,706 | INFO     | job summary report
[2025-12-10 01:19:53] 2025-12-10 09:18:49,706 | INFO     | --------------------------------------------------
[2025-12-10 01:19:53] 2025-12-10 09:18:49,706 | INFO     | PanDA job id: 6893862594
[2025-12-10 01:19:53] 2025-12-10 09:18:49,706 | INFO     | task id: 47523449
[2025-12-10 01:19:53] 2025-12-10 09:18:49,706 | INFO     | errors: (none)
[2025-12-10 01:19:53] 2025-12-10 09:18:49,707 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-10 01:19:53] 2025-12-10 09:18:49,707 | INFO     | pilot state: finished 
[2025-12-10 01:19:53] 2025-12-10 09:18:49,707 | INFO     | transexitcode: 0
[2025-12-10 01:19:53] 2025-12-10 09:18:49,707 | INFO     | exeerrorcode: 0
[2025-12-10 01:19:53] 2025-12-10 09:18:49,707 | INFO     | exeerrordiag: 
[2025-12-10 01:19:53] 2025-12-10 09:18:49,707 | INFO     | exitcode: 0
[2025-12-10 01:19:53] 2025-12-10 09:18:49,707 | INFO     | exitmsg: OK
[2025-12-10 01:19:53] 2025-12-10 09:18:49,707 | INFO     | cpuconsumptiontime: 206161 s
[2025-12-10 01:19:53] 2025-12-10 09:18:49,707 | INFO     | nevents: 1000
[2025-12-10 01:19:53] 2025-12-10 09:18:49,707 | INFO     | neventsw: 0
[2025-12-10 01:19:53] 2025-12-10 09:18:49,707 | INFO     | pid: 300128
[2025-12-10 01:19:53] 2025-12-10 09:18:49,707 | INFO     | pgrp: 300128
[2025-12-10 01:19:53] 2025-12-10 09:18:49,707 | INFO     | corecount: 10
[2025-12-10 01:19:53] 2025-12-10 09:18:49,707 | INFO     | event service: False
[2025-12-10 01:19:53] 2025-12-10 09:18:49,707 | INFO     | sizes: {0: 2284328, 1: 2284328, 10: 2284618, 12: 2284646, 42274: 2330191, 42280: 2339213, 42283: 2339397, 42291: 2339643}
[2025-12-10 01:19:53] 2025-12-10 09:18:49,707 | INFO     | --------------------------------------------------
[2025-12-10 01:19:53] 2025-12-10 09:18:49,708 | INFO     | 
[2025-12-10 01:19:53] 2025-12-10 09:18:49,708 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc242/slots/3
[2025-12-10 01:19:53] 2025-12-10 09:18:49,729 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-10 01:19:53] 2025-12-10 09:18:49,729 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-10 01:19:53] 2025-12-10 09:18:49,729 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-10 01:19:53] 2025-12-10 09:18:49,729 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-10 01:19:53] 2025-12-10 09:18:49,729 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-10 01:19:53] 2025-12-10 09:18:49,729 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-10 01:19:53] 2025-12-10 09:18:49,729 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-10 01:19:53] 2025-12-10 09:18:49,729 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-10 01:19:53] 2025-12-10 09:18:49,729 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-10 01:19:53] 2025-12-10 09:18:49,729 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-10 01:19:53] 2025-12-10 09:18:49,729 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-10 01:19:53] 2025-12-10 09:18:49,730 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-10 01:19:53] 2025-12-10 09:18:49,730 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-10 01:19:53] 2025-12-10 09:18:49,730 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-10 01:19:53] 2025-12-10 09:18:49,730 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-10 01:19:53] 2025-12-10 09:18:49,730 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-10 01:19:53] 2025-12-10 09:18:49,730 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-10 01:19:53] 2025-12-10 09:18:49,730 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-10 01:19:53] 2025-12-10 09:18:49,730 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-10 01:19:53] 2025-12-10 09:18:49,730 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-10 01:19:53] 2025-12-10 09:18:49,730 | INFO     | job 6893862594 has completed (purged errors)
[2025-12-10 01:19:53] 2025-12-10 09:18:49,730 | INFO     | overall cleanup function is called
[2025-12-10 01:19:53] 2025-12-10 09:18:50,743 | INFO     | --- collectZombieJob: --- 10, [300128]
[2025-12-10 01:19:53] 2025-12-10 09:18:50,744 | INFO     | zombie collector waiting for pid 300128
[2025-12-10 01:19:53] 2025-12-10 09:18:50,744 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-10 01:19:53] 2025-12-10 09:18:50,744 | INFO     | collected zombie processes
[2025-12-10 01:19:53] 2025-12-10 09:18:50,744 | INFO     | will attempt to kill all subprocesses of pid=300128
[2025-12-10 01:19:53] 2025-12-10 09:18:50,863 | INFO     | process IDs to be killed: [300128] (in reverse order)
[2025-12-10 01:19:53] 2025-12-10 09:18:50,913 | WARNING  | found no corresponding commands to process id(s)
[2025-12-10 01:19:53] 2025-12-10 09:18:50,913 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-10 01:19:53] 2025-12-10 09:18:50,917 | INFO     | did not find any defunct processes belonging to 300128
[2025-12-10 01:19:53] 2025-12-10 09:18:50,921 | INFO     | did not find any defunct processes belonging to 300128
[2025-12-10 01:19:53] 2025-12-10 09:18:50,922 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-10 01:19:53] 2025-12-10 09:18:50,922 | INFO     | ready for new job
[2025-12-10 01:19:53] 2025-12-10 09:18:50,922 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-10 01:19:53] 2025-12-10 09:18:50,926 | INFO     | ***************************************
[2025-12-10 01:19:53] 2025-12-10 09:18:50,926 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-10 01:19:53] 2025-12-10 09:18:50,926 | INFO     | ***************************************
[2025-12-10 01:19:53] 2025-12-10 09:18:50,926 | INFO     | 
[2025-12-10 01:19:53] 2025-12-10 09:18:50,928 | INFO     | architecture information:
[2025-12-10 01:19:53] 2025-12-10 09:18:50,928 | INFO     | executing command: cat /etc/os-release
[2025-12-10 01:19:53] 2025-12-10 09:18:50,940 | INFO     | cat /etc/os-release:
[2025-12-10 01:19:53] NAME="CentOS Linux"
[2025-12-10 01:19:53] VERSION="7 (Core)"
[2025-12-10 01:19:53] ID="centos"
[2025-12-10 01:19:53] ID_LIKE="rhel fedora"
[2025-12-10 01:19:53] VERSION_ID="7"
[2025-12-10 01:19:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-10 01:19:53] ANSI_COLOR="0;31"
[2025-12-10 01:19:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-10 01:19:53] HOME_URL="https://www.centos.org/"
[2025-12-10 01:19:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-10 01:19:53] 
[2025-12-10 01:19:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-10 01:19:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-10 01:19:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-10 01:19:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-10 01:19:53] 
[2025-12-10 01:19:53] 2025-12-10 09:18:50,940 | INFO     | ***************************************
[2025-12-10 01:19:53] 2025-12-10 09:18:51,443 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc242/slots/3
[2025-12-10 01:19:53] 2025-12-10 09:18:51,459 | INFO     | sufficient remaining disk space (88231378944 B)
[2025-12-10 01:19:53] 2025-12-10 09:18:51,460 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-10 01:19:53] 2025-12-10 09:18:51,460 | INFO     | current server update state: UPDATING_FINAL
[2025-12-10 01:19:53] 2025-12-10 09:18:51,460 | INFO     | update_server=False
[2025-12-10 01:19:53] 2025-12-10 09:18:51,460 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-10 01:19:53] 2025-12-10 09:18:51,460 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-10 01:19:53] 2025-12-10 09:18:51,460 | INFO     | aborting loop
[2025-12-10 01:19:53] 2025-12-10 09:18:51,498 | INFO     | all data control threads have been joined
[2025-12-10 01:19:53] 2025-12-10 09:18:51,513 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-10 01:19:53] 2025-12-10 09:18:51,761 | INFO     | all payload control threads have been joined
[2025-12-10 01:19:53] 2025-12-10 09:18:51,851 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-10 01:19:53] 2025-12-10 09:18:52,461 | INFO     | [job] retrieve thread has finished
[2025-12-10 01:19:53] 2025-12-10 09:18:52,465 | INFO     | [job] job monitor thread has finished
[2025-12-10 01:19:53] 2025-12-10 09:18:52,503 | INFO     | [data] control thread has finished
[2025-12-10 01:19:53] 2025-12-10 09:18:52,676 | INFO     | [job] validate thread has finished
[2025-12-10 01:19:53] 2025-12-10 09:18:52,766 | INFO     | [payload] control thread has finished
[2025-12-10 01:19:53] 2025-12-10 09:18:52,855 | INFO     | [job] create_data_payload thread has finished
[2025-12-10 01:19:53] 2025-12-10 09:18:52,955 | INFO     | all job control threads have been joined
[2025-12-10 01:19:53] 2025-12-10 09:18:52,961 | INFO     | [data] copytool_in thread has finished
[2025-12-10 01:19:53] 2025-12-10 09:18:53,095 | INFO     | [payload] validate_post thread has finished
[2025-12-10 01:19:53] 2025-12-10 09:18:53,105 | INFO     | [payload] validate_pre thread has finished
[2025-12-10 01:19:53] 2025-12-10 09:18:53,144 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-10 01:19:53] 2025-12-10 09:18:53,308 | INFO     | [payload] execute_payloads thread has finished
[2025-12-10 01:19:53] 2025-12-10 09:18:53,517 | INFO     | [data] copytool_out thread has finished
[2025-12-10 01:19:53] 2025-12-10 09:18:53,961 | INFO     | [job] control thread has finished
[2025-12-10 01:19:53] 2025-12-10 09:18:54,057 | INFO     | [payload] failed_post thread has finished
[2025-12-10 01:19:53] 2025-12-10 09:18:54,258 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-10 01:19:53] 2025-12-10 09:18:55,263 | INFO     | [job] queue monitor thread has finished
[2025-12-10 01:19:53] 2025-12-10 09:18:55,856 | INFO     | [data] queue_monitor thread has finished
[2025-12-10 01:19:53] 2025-12-10 09:19:20,964 | INFO     | PID=293447 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-10 01:19:53] 2025-12-10 09:19:20,964 | INFO     | .. there are 3 such processes running
[2025-12-10 01:19:53] 2025-12-10 09:19:20,965 | INFO     | found 0 job(s) in 20 queues
[2025-12-10 01:19:53] 2025-12-10 09:19:20,965 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-10 01:19:53] 2025-12-10 09:19:20,965 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-10 01:19:53] 2025-12-10 09:19:46,216 | INFO     | [monitor] cgroup control has ended
[2025-12-10 01:19:53] 2025-12-10 09:19:47,838 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136166991435584)>', '<ExcThread(monitor, started 136166718281472)>']
[2025-12-10 01:19:53] 2025-12-10 09:19:48,089 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-10 01:19:53] 2025-12-10 09:19:48,089 | INFO     | [monitor] control thread has ended
[2025-12-10 01:19:53] 2025-12-10 09:19:52,862 | INFO     | all workflow threads have been joined
[2025-12-10 01:19:53] 2025-12-10 09:19:52,863 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-10 01:19:53] 2025-12-10 09:19:52,863 | INFO     | traces error code: 0
[2025-12-10 01:19:53] 2025-12-10 09:19:52,863 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-10 01:19:53] 2025-12-10 09:19:52,934 [wrapper] ==== pilot stdout END ====
[2025-12-10 01:19:53] 2025-12-10 09:19:52,936 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-10 01:19:53] 2025-12-10 09:19:52,938 [wrapper] pilotpid: 293447
[2025-12-10 01:19:53] 2025-12-10 09:19:52,939 [wrapper] Pilot exit status: 0
[2025-12-10 01:19:53] 2025-12-10 09:19:52,946 [wrapper] pandaids: 6893862594
[2025-12-10 01:19:53] 2025-12-10 09:19:52,975 [wrapper] cleanup supervisor_pilot  845248 293448
[2025-12-10 01:19:53] 2025-12-10 09:19:52,977 [wrapper] Test setup, not cleaning
[2025-12-10 01:19:53] 2025-12-10 09:19:52,979 [wrapper] apfmon messages muted
[2025-12-10 01:19:53] 2025-12-10 09:19:52,981 [wrapper] ==== wrapper stdout END ====
[2025-12-10 01:19:53] 2025-12-10 09:19:52,982 [wrapper] ==== wrapper stderr END ====
[2025-12-10 01:19:53]  *** Error codes and diagnostics ***
[2025-12-10 01:19:53]     "exeErrorCode": 0,
[2025-12-10 01:19:53]     "exeErrorDiag": "",
[2025-12-10 01:19:53]     "pilotErrorCode": 0,
[2025-12-10 01:19:53]     "pilotErrorDiag": "",
[2025-12-10 01:19:53]  *** Listing of results directory ***
[2025-12-10 01:19:53] total 1329304
[2025-12-10 01:19:53] -rw-r--r-- 1 root root    576529 Nov 20 06:06 pilot3.tar.gz
[2025-12-10 01:19:53] -rw-r--r-- 1 root root      5112 Nov 20 06:13 queuedata.json
[2025-12-10 01:19:53] -rwx------ 1 4871 1028     36292 Nov 20 06:14 runpilot2-wrapper.sh
[2025-12-10 01:19:53] -rw-r--r-- 1 root root       100 Dec  9 13:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-10 01:19:53] -rwxr-xr-x 1 root root      7986 Dec  9 13:33 run_atlas
[2025-12-10 01:19:53] -rw-r--r-- 1 root root       105 Dec  9 13:33 job.xml
[2025-12-10 01:19:53] -rw-r--r-- 2 root root 409612112 Dec  9 13:33 EVNT.47493127._000593.pool.root.1
[2025-12-10 01:19:53] drwxrwx--x 2 root root      4096 Dec  9 13:33 shared
[2025-12-10 01:19:53] -rw-r--r-- 2 root root    590106 Dec  9 13:33 input.tar.gz
[2025-12-10 01:19:53] -rw-r--r-- 2 root root     15847 Dec  9 13:33 start_atlas.sh
[2025-12-10 01:19:53] -rw-r--r-- 1 root root         0 Dec  9 13:33 boinc_setup_complete
[2025-12-10 01:19:53] -rw-r--r-- 1 root root         0 Dec  9 13:33 boinc_lockfile
[2025-12-10 01:19:53] -rw-r--r-- 1 root root      2785 Dec  9 13:33 pandaJob.out
[2025-12-10 01:19:53] -rw------- 1 root root    979183 Dec  9 13:33 agis_schedconf.cvmfs.json
[2025-12-10 01:19:53] drwxr-xr-x 5  320  320      4096 Dec  9 13:33 pilot3
[2025-12-10 01:19:53] -rw-r--r-- 1 root root      9244 Dec  9 14:11 init_data.xml
[2025-12-10 01:19:53] -rw-r--r-- 1 root root       533 Dec 10 01:09 boinc_task_state.xml
[2025-12-10 01:19:53] -rw------- 1 root root 931462529 Dec 10 01:18 HITS.47523449._005928.pool.root.1
[2025-12-10 01:19:53] -rw------- 1 root root      1034 Dec 10 01:18 memory_monitor_summary.json
[2025-12-10 01:19:53] -rw------- 1 root root        95 Dec 10 01:18 pilot_heartbeat.json
[2025-12-10 01:19:53] -rw------- 1 root root   1516240 Dec 10 01:18 agis_ddmendpoints.agis.ALL.json
[2025-12-10 01:19:53] -rw------- 1 root root   2160491 Dec 10 01:18 log.47523449._005928.job.log.tgz.1
[2025-12-10 01:19:53] -rw------- 1 root root      8569 Dec 10 01:18 heartbeat.json
[2025-12-10 01:19:53] -rw-r--r-- 1 root root      8192 Dec 10 01:19 boinc_mmap_file
[2025-12-10 01:19:53] -rw-r--r-- 1 root root        29 Dec 10 01:19 wrapper_checkpoint.txt
[2025-12-10 01:19:53] -rw------- 1 root root      4836 Dec 10 01:19 pilotlog.txt
[2025-12-10 01:19:53] -rw------- 1 root root   5951934 Dec 10 01:19 log.47523449._005928.job.log.1
[2025-12-10 01:19:53] -rw------- 1 root root       353 Dec 10 01:19 output.list
[2025-12-10 01:19:53] -rw-r--r-- 1 root root       620 Dec 10 01:19 runtime_log
[2025-12-10 01:19:53] -rw------- 1 root root   8130560 Dec 10 01:19 result.tar.gz
[2025-12-10 01:19:53] -rw------- 1 root root       656 Dec 10 01:19 TTKMDmNbKg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmI3HKDmMSOTzm.diag
[2025-12-10 01:19:53] -rw-r--r-- 1 root root      9021 Dec 10 01:19 runtime_log.err
[2025-12-10 01:19:53] -rw-r--r-- 1 root root     21503 Dec 10 01:19 stderr.txt
[2025-12-10 01:19:53] HITS file was successfully produced:
[2025-12-10 01:19:53] -rw------- 1 root root 931462529 Dec 10 01:18 shared/HITS.pool.root.1
[2025-12-10 01:19:53]  *** Contents of shared directory: ***
[2025-12-10 01:19:53] total 1318188
[2025-12-10 01:19:53] -rw-r--r-- 2 root root 409612112 Dec  9 13:33 ATLAS.root_0
[2025-12-10 01:19:53] -rw-r--r-- 2 root root    590106 Dec  9 13:33 input.tar.gz
[2025-12-10 01:19:53] -rw-r--r-- 2 root root     15847 Dec  9 13:33 start_atlas.sh
[2025-12-10 01:19:53] -rw------- 1 root root 931462529 Dec 10 01:18 HITS.pool.root.1
[2025-12-10 01:19:53] -rw------- 1 root root   8130560 Dec 10 01:19 result.tar.gz
01:19:54 (289563): run_atlas exited; CPU time 205946.445643
01:19:54 (289563): called boinc_finish(0)

</stderr_txt>
]]>

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