Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
23:45:25 (3495627): wrapper (7.7.26015): starting
23:45:25 (3495627): wrapper: running run_atlas (--nthreads 10)
[2025-12-07 23:45:25] Arguments: --nthreads 10
[2025-12-07 23:45:25] Threads: 10
[2025-12-07 23:45:25] Checking for CVMFS
[2025-12-07 23:45:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-07 23:45:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-07 23:45:25] Running cvmfs_config stat atlas.cern.ch
[2025-12-07 23:45:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-07 23:45:26] 2.13.3.0 11319 2441 79704 153758 2 76 4086071 4096000 12845 130560 0 350174235 100.000 87575 616 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-12-07 23:45:26] CVMFS is ok
[2025-12-07 23:45:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-07 23:45:26] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-07 23:45:26] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-07 23:45:26] Further information can be found at the LHC@home message board.
[2025-12-07 23:45:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-07 23:45:26] Checking for apptainer binary...
[2025-12-07 23:45:26] apptainer is not installed, using version from CVMFS
[2025-12-07 23:45:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-07 23:45:26] 7950x-linux
[2025-12-07 23:45:26] apptainer works
[2025-12-07 23:45:26] Set ATHENA_PROC_NUMBER=10
[2025-12-07 23:45:26] Set ATHENA_CORE_NUMBER=10
[2025-12-07 23:45:26] Starting ATLAS job with PandaID=6894281017
[2025-12-07 23:45:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc538/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-08 16:30:30]  *** The last 200 lines of the pilot log: ***
[2025-12-08 16:30:30] 2025-12-09 00:29:56,484 | INFO     | time since job start (60256s) is within the limit (172800.0s)
[2025-12-08 16:30:30] 2025-12-09 00:29:56,514 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-08 16:30:30] 2025-12-09 00:29:56,517 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3999.9856875000005
[2025-12-08 16:30:30] 2025-12-09 00:29:56,521 | INFO     | using path: /var/lib/multiboinc/boinc538/slots/2/PanDA_Pilot-6894281017/memory_monitor_summary.json (trf name=prmon)
[2025-12-08 16:30:30] 2025-12-09 00:29:56,521 | INFO     | extracted standard info from prmon json
[2025-12-08 16:30:30] 2025-12-09 00:29:56,521 | INFO     | extracted standard memory fields from prmon json
[2025-12-08 16:30:30] 2025-12-09 00:29:56,521 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-08 16:30:30] 2025-12-09 00:29:56,529 | INFO     | fitting pss+swap vs Time
[2025-12-08 16:30:30] 2025-12-09 00:29:56,530 | INFO     | sum of square deviations: 299053522300.99585
[2025-12-08 16:30:30] 2025-12-09 00:29:56,541 | INFO     | sum of deviations: 2058832660583.901
[2025-12-08 16:30:30] 2025-12-09 00:29:56,541 | INFO     | mean x: 1765210073.5020242
[2025-12-08 16:30:30] 2025-12-09 00:29:56,541 | INFO     | mean y: 3155278.798582996
[2025-12-08 16:30:30] 2025-12-09 00:29:56,541 | INFO     | intersect: -12149425717.922798
[2025-12-08 16:30:30] 2025-12-09 00:29:56,541 | INFO     | chi2: 4.736305875068171
[2025-12-08 16:30:30] 2025-12-09 00:29:56,542 | INFO     | sum of square deviations: 294536173095.9962
[2025-12-08 16:30:30] 2025-12-09 00:29:56,555 | INFO     | sum of deviations: 2369572334735.5137
[2025-12-08 16:30:30] 2025-12-09 00:29:56,555 | INFO     | mean x: 1765209921.0020347
[2025-12-08 16:30:30] 2025-12-09 00:29:56,555 | INFO     | mean y: 3165759.2421159716
[2025-12-08 16:30:30] 2025-12-09 00:29:56,555 | INFO     | intersect: -14198120791.879786
[2025-12-08 16:30:30] 2025-12-09 00:29:56,555 | INFO     | chi2: 2.1501432491725043
[2025-12-08 16:30:30] 2025-12-09 00:29:56,555 | INFO     | current chi2=2.1501432491725043 (change=54.602947827106775 %)
[2025-12-08 16:30:30] 2025-12-09 00:29:56,556 | INFO     | sum of square deviations: 290064545678.49603
[2025-12-08 16:30:30] 2025-12-09 00:29:56,570 | INFO     | sum of deviations: 2402098071735.9863
[2025-12-08 16:30:30] 2025-12-09 00:29:56,571 | INFO     | mean x: 1765209768.502045
[2025-12-08 16:30:30] 2025-12-09 00:29:56,571 | INFO     | mean y: 3166863.755623722
[2025-12-08 16:30:30] 2025-12-09 00:29:56,571 | INFO     | intersect: -14614982938.764822
[2025-12-08 16:30:30] 2025-12-09 00:29:56,571 | INFO     | chi2: 2.0095826470063836
[2025-12-08 16:30:30] 2025-12-09 00:29:56,571 | INFO     | current chi2=2.0095826470063836 (change=6.537266864438747 %)
[2025-12-08 16:30:30] 2025-12-09 00:29:56,571 | INFO     | right removable region: 977
[2025-12-08 16:30:30] 2025-12-09 00:29:56,572 | INFO     | sum of square deviations: 294536171875.9962
[2025-12-08 16:30:30] 2025-12-09 00:29:56,586 | INFO     | sum of deviations: 1808501777589.6616
[2025-12-08 16:30:30] 2025-12-09 00:29:56,586 | INFO     | mean x: 1765210226.0020347
[2025-12-08 16:30:30] 2025-12-09 00:29:56,586 | INFO     | mean y: 3163715.6683621565
[2025-12-08 16:30:30] 2025-12-09 00:29:56,586 | INFO     | intersect: -10835524827.103107
[2025-12-08 16:30:30] 2025-12-09 00:29:56,587 | INFO     | chi2: 2.9686426031204465
[2025-12-08 16:30:30] 2025-12-09 00:29:56,587 | INFO     | current chi2=2.9686426031204465 (change=37.32156069675888 %)
[2025-12-08 16:30:30] 2025-12-09 00:29:56,588 | INFO     | sum of square deviations: 290064543238.49603
[2025-12-08 16:30:30] 2025-12-09 00:29:56,598 | INFO     | sum of deviations: 1738592685460.0652
[2025-12-08 16:30:30] 2025-12-09 00:29:56,598 | INFO     | mean x: 1765210378.502045
[2025-12-08 16:30:30] 2025-12-09 00:29:56,598 | INFO     | mean y: 3166099.2157464214
[2025-12-08 16:30:30] 2025-12-09 00:29:56,598 | INFO     | intersect: -10577175152.070795
[2025-12-08 16:30:30] 2025-12-09 00:29:56,599 | INFO     | chi2: 2.927586594995875
[2025-12-08 16:30:30] 2025-12-09 00:29:56,599 | INFO     | current chi2=2.927586594995875 (change=1.3829892517683335 %)
[2025-12-08 16:30:30] 2025-12-09 00:29:56,599 | INFO     | left removable region: 20
[2025-12-08 16:30:30] 2025-12-09 00:29:56,599 | INFO     | sum of square deviations: 271777739093.9958
[2025-12-08 16:30:30] 2025-12-09 00:29:56,609 | INFO     | sum of deviations: 1987347462323.3264
[2025-12-08 16:30:30] 2025-12-09 00:29:56,609 | INFO     | mean x: 1765210348.00209
[2025-12-08 16:30:30] 2025-12-09 00:29:56,609 | INFO     | mean y: 3180916.3375130617
[2025-12-08 16:30:30] 2025-12-09 00:29:56,610 | INFO     | intersect: -12904742732.094704
[2025-12-08 16:30:30] 2025-12-09 00:29:56,610 | INFO     | chi2: 0.17947929184207573
[2025-12-08 16:30:30] 2025-12-09 00:29:56,610 | INFO     | current memory leak: 7.31 B/s (using 957 data points, chi2=0.18)
[2025-12-08 16:30:30] 2025-12-09 00:29:56,611 | INFO     | could have reported an average CPU frequency of 3999 MHz (37 samples)
[2025-12-08 16:30:30] 2025-12-09 00:29:56,611 | INFO     | ..............................
[2025-12-08 16:30:30] 2025-12-09 00:29:56,611 | INFO     | . Timing measurements:
[2025-12-08 16:30:30] 2025-12-09 00:29:56,611 | INFO     | . get job = 0 s
[2025-12-08 16:30:30] 2025-12-09 00:29:56,611 | INFO     | . initial setup = 3 s
[2025-12-08 16:30:30] 2025-12-09 00:29:56,611 | INFO     | . payload setup = 7 s
[2025-12-08 16:30:30] 2025-12-09 00:29:56,611 | INFO     | . stage-in = 0 s
[2025-12-08 16:30:30] 2025-12-09 00:29:56,611 | INFO     | . payload execution = 60220 s
[2025-12-08 16:30:30] 2025-12-09 00:29:56,611 | INFO     | . stage-out = 3 s
[2025-12-08 16:30:30] 2025-12-09 00:29:56,611 | INFO     | . log creation = 0 s
[2025-12-08 16:30:30] 2025-12-09 00:29:56,611 | INFO     | ..............................
[2025-12-08 16:30:30] 2025-12-09 00:29:56,738 | INFO     | 
[2025-12-08 16:30:30] 2025-12-09 00:29:56,738 | INFO     | job summary report
[2025-12-08 16:30:30] 2025-12-09 00:29:56,738 | INFO     | --------------------------------------------------
[2025-12-08 16:30:30] 2025-12-09 00:29:56,738 | INFO     | PanDA job id: 6894281017
[2025-12-08 16:30:30] 2025-12-09 00:29:56,738 | INFO     | task id: 47533967
[2025-12-08 16:30:30] 2025-12-09 00:29:56,738 | INFO     | errors: (none)
[2025-12-08 16:30:30] 2025-12-09 00:29:56,738 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-08 16:30:30] 2025-12-09 00:29:56,738 | INFO     | pilot state: finished 
[2025-12-08 16:30:30] 2025-12-09 00:29:56,738 | INFO     | transexitcode: 0
[2025-12-08 16:30:30] 2025-12-09 00:29:56,738 | INFO     | exeerrorcode: 0
[2025-12-08 16:30:30] 2025-12-09 00:29:56,738 | INFO     | exeerrordiag: 
[2025-12-08 16:30:30] 2025-12-09 00:29:56,738 | INFO     | exitcode: 0
[2025-12-08 16:30:30] 2025-12-09 00:29:56,738 | INFO     | exitmsg: OK
[2025-12-08 16:30:30] 2025-12-09 00:29:56,738 | INFO     | cpuconsumptiontime: 133375 s
[2025-12-08 16:30:30] 2025-12-09 00:29:56,738 | INFO     | nevents: 1000
[2025-12-08 16:30:30] 2025-12-09 00:29:56,738 | INFO     | neventsw: 0
[2025-12-08 16:30:30] 2025-12-09 00:29:56,738 | INFO     | pid: 3506199
[2025-12-08 16:30:30] 2025-12-09 00:29:56,738 | INFO     | pgrp: 3506199
[2025-12-08 16:30:30] 2025-12-09 00:29:56,738 | INFO     | corecount: 10
[2025-12-08 16:30:30] 2025-12-09 00:29:56,738 | INFO     | event service: False
[2025-12-08 16:30:30] 2025-12-09 00:29:56,738 | INFO     | sizes: {0: 2284215, 1: 2284329, 6: 2284619, 11: 2284647, 60229: 2337187, 60234: 2346393, 60240: 2346583}
[2025-12-08 16:30:30] 2025-12-09 00:29:56,738 | INFO     | --------------------------------------------------
[2025-12-08 16:30:30] 2025-12-09 00:29:56,738 | INFO     | 
[2025-12-08 16:30:30] 2025-12-09 00:29:56,739 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc538/slots/2
[2025-12-08 16:30:30] 2025-12-09 00:29:56,760 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-08 16:30:30] 2025-12-09 00:29:56,760 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-08 16:30:30] 2025-12-09 00:29:56,760 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-08 16:30:30] 2025-12-09 00:29:56,760 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-08 16:30:30] 2025-12-09 00:29:56,760 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-08 16:30:30] 2025-12-09 00:29:56,760 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-08 16:30:30] 2025-12-09 00:29:56,760 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-08 16:30:30] 2025-12-09 00:29:56,760 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-08 16:30:30] 2025-12-09 00:29:56,760 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-08 16:30:30] 2025-12-09 00:29:56,760 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-08 16:30:30] 2025-12-09 00:29:56,760 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-08 16:30:30] 2025-12-09 00:29:56,760 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-08 16:30:30] 2025-12-09 00:29:56,760 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-08 16:30:30] 2025-12-09 00:29:56,760 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-08 16:30:30] 2025-12-09 00:29:56,760 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-08 16:30:30] 2025-12-09 00:29:56,761 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-08 16:30:30] 2025-12-09 00:29:56,761 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-08 16:30:30] 2025-12-09 00:29:56,761 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-08 16:30:30] 2025-12-09 00:29:56,761 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-08 16:30:30] 2025-12-09 00:29:56,761 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-08 16:30:30] 2025-12-09 00:29:56,761 | INFO     | job 6894281017 has completed (purged errors)
[2025-12-08 16:30:30] 2025-12-09 00:29:56,761 | INFO     | overall cleanup function is called
[2025-12-08 16:30:30] 2025-12-09 00:29:57,777 | INFO     | --- collectZombieJob: --- 10, [3506199]
[2025-12-08 16:30:30] 2025-12-09 00:29:57,777 | INFO     | zombie collector waiting for pid 3506199
[2025-12-08 16:30:30] 2025-12-09 00:29:57,777 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-08 16:30:30] 2025-12-09 00:29:57,777 | INFO     | collected zombie processes
[2025-12-08 16:30:30] 2025-12-09 00:29:57,777 | INFO     | will attempt to kill all subprocesses of pid=3506199
[2025-12-08 16:30:30] 2025-12-09 00:29:58,058 | INFO     | process IDs to be killed: [3506199] (in reverse order)
[2025-12-08 16:30:30] 2025-12-09 00:29:58,221 | WARNING  | found no corresponding commands to process id(s)
[2025-12-08 16:30:30] 2025-12-09 00:29:58,221 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-08 16:30:30] 2025-12-09 00:29:58,229 | INFO     | did not find any defunct processes belonging to 3506199
[2025-12-08 16:30:30] 2025-12-09 00:29:58,240 | INFO     | did not find any defunct processes belonging to 3506199
[2025-12-08 16:30:30] 2025-12-09 00:29:58,241 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-08 16:30:30] 2025-12-09 00:29:58,242 | INFO     | ready for new job
[2025-12-08 16:30:30] 2025-12-09 00:29:58,242 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-08 16:30:30] 2025-12-09 00:29:58,245 | INFO     | ***************************************
[2025-12-08 16:30:30] 2025-12-09 00:29:58,245 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-08 16:30:30] 2025-12-09 00:29:58,245 | INFO     | ***************************************
[2025-12-08 16:30:30] 2025-12-09 00:29:58,245 | INFO     | 
[2025-12-08 16:30:30] 2025-12-09 00:29:58,246 | INFO     | architecture information:
[2025-12-08 16:30:30] 2025-12-09 00:29:58,246 | INFO     | executing command: cat /etc/os-release
[2025-12-08 16:30:30] 2025-12-09 00:29:58,257 | INFO     | cat /etc/os-release:
[2025-12-08 16:30:30] NAME="CentOS Linux"
[2025-12-08 16:30:30] VERSION="7 (Core)"
[2025-12-08 16:30:30] ID="centos"
[2025-12-08 16:30:30] ID_LIKE="rhel fedora"
[2025-12-08 16:30:30] VERSION_ID="7"
[2025-12-08 16:30:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-08 16:30:30] ANSI_COLOR="0;31"
[2025-12-08 16:30:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-08 16:30:30] HOME_URL="https://www.centos.org/"
[2025-12-08 16:30:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-08 16:30:30] 
[2025-12-08 16:30:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-08 16:30:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-08 16:30:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-08 16:30:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-08 16:30:30] 
[2025-12-08 16:30:30] 2025-12-09 00:29:58,257 | INFO     | ***************************************
[2025-12-08 16:30:30] 2025-12-09 00:29:58,760 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc538/slots/2
[2025-12-08 16:30:30] 2025-12-09 00:29:58,785 | INFO     | sufficient remaining disk space (171925569536 B)
[2025-12-08 16:30:30] 2025-12-09 00:29:58,785 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-08 16:30:30] 2025-12-09 00:29:58,785 | INFO     | current server update state: UPDATING_FINAL
[2025-12-08 16:30:30] 2025-12-09 00:29:58,785 | INFO     | update_server=False
[2025-12-08 16:30:30] 2025-12-09 00:29:58,785 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-08 16:30:30] 2025-12-09 00:29:58,788 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-08 16:30:30] 2025-12-09 00:29:59,131 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-08 16:30:30] 2025-12-09 00:29:59,131 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-08 16:30:30] 2025-12-09 00:29:59,131 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-08 16:30:30] 2025-12-09 00:29:59,131 | INFO     | will abort loop
[2025-12-08 16:30:30] 2025-12-09 00:29:59,727 | INFO     | all data control threads have been joined
[2025-12-08 16:30:30] 2025-12-09 00:29:59,790 | INFO     | [job] retrieve thread has finished
[2025-12-08 16:30:30] 2025-12-09 00:29:59,911 | INFO     | [job] create_data_payload thread has finished
[2025-12-08 16:30:30] 2025-12-09 00:30:00,042 | INFO     | all payload control threads have been joined
[2025-12-08 16:30:30] 2025-12-09 00:30:00,072 | INFO     | [payload] validate_pre thread has finished
[2025-12-08 16:30:30] 2025-12-09 00:30:00,104 | INFO     | [job] validate thread has finished
[2025-12-08 16:30:30] 2025-12-09 00:30:00,136 | INFO     | [job] job monitor thread has finished
[2025-12-08 16:30:30] 2025-12-09 00:30:00,269 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-08 16:30:30] 2025-12-09 00:30:00,274 | INFO     | [payload] failed_post thread has finished
[2025-12-08 16:30:30] 2025-12-09 00:30:00,400 | INFO     | all job control threads have been joined
[2025-12-08 16:30:30] 2025-12-09 00:30:00,604 | INFO     | [payload] validate_post thread has finished
[2025-12-08 16:30:30] 2025-12-09 00:30:00,730 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-08 16:30:30] 2025-12-09 00:30:00,732 | INFO     | [data] control thread has finished
[2025-12-08 16:30:30] 2025-12-09 00:30:00,793 | INFO     | [data] copytool_out thread has finished
[2025-12-08 16:30:30] 2025-12-09 00:30:00,819 | INFO     | [data] copytool_in thread has finished
[2025-12-08 16:30:30] 2025-12-09 00:30:01,047 | INFO     | [payload] control thread has finished
[2025-12-08 16:30:30] 2025-12-09 00:30:01,133 | INFO     | [payload] execute_payloads thread has finished
[2025-12-08 16:30:30] 2025-12-09 00:30:01,405 | INFO     | [job] control thread has finished
[2025-12-08 16:30:30] 2025-12-09 00:30:01,747 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-08 16:30:30] 2025-12-09 00:30:02,752 | INFO     | [job] queue monitor thread has finished
[2025-12-08 16:30:30] 2025-12-09 00:30:04,735 | INFO     | [data] queue_monitor thread has finished
[2025-12-08 16:30:30] 2025-12-09 00:30:20,597 | INFO     | [monitor] cgroup control has ended
[2025-12-08 16:30:30] 2025-12-09 00:30:22,412 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131565383489344)>', '<ExcThread(monitor, started 131564897818368)>']
[2025-12-08 16:30:30] 2025-12-09 00:30:27,437 | INFO     | all workflow threads have been joined
[2025-12-08 16:30:30] 2025-12-09 00:30:27,437 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-08 16:30:30] 2025-12-09 00:30:27,437 | INFO     | traces error code: 0
[2025-12-08 16:30:30] 2025-12-09 00:30:27,437 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-08 16:30:30] 2025-12-09 00:30:29,891 | INFO     | PID=3499462 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-08 16:30:30] 2025-12-09 00:30:29,891 | INFO     | .. there are 14 such processes running
[2025-12-08 16:30:30] 2025-12-09 00:30:29,891 | INFO     | found 0 job(s) in 20 queues
[2025-12-08 16:30:30] 2025-12-09 00:30:29,891 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-08 16:30:30] 2025-12-09 00:30:29,892 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-08 16:30:30] 2025-12-09 00:30:29,892 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-08 16:30:30] 2025-12-09 00:30:29,892 | INFO     | [monitor] control thread has ended
[2025-12-08 16:30:30] 2025-12-09 00:30:29,984 [wrapper] ==== pilot stdout END ====
[2025-12-08 16:30:30] 2025-12-09 00:30:29,986 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-08 16:30:30] 2025-12-09 00:30:29,990 [wrapper] pilotpid: 3499462
[2025-12-08 16:30:30] 2025-12-09 00:30:29,991 [wrapper] Pilot exit status: 0
[2025-12-08 16:30:30] 2025-12-09 00:30:30,001 [wrapper] pandaids: 6894281017
[2025-12-08 16:30:30] 2025-12-09 00:30:30,046 [wrapper] cleanup supervisor_pilot  656674 3499463
[2025-12-08 16:30:30] 2025-12-09 00:30:30,050 [wrapper] Test setup, not cleaning
[2025-12-08 16:30:30] 2025-12-09 00:30:30,052 [wrapper] apfmon messages muted
[2025-12-08 16:30:30] 2025-12-09 00:30:30,055 [wrapper] ==== wrapper stdout END ====
[2025-12-08 16:30:30] 2025-12-09 00:30:30,057 [wrapper] ==== wrapper stderr END ====
[2025-12-08 16:30:30]  *** Error codes and diagnostics ***
[2025-12-08 16:30:30]     "exeErrorCode": 0,
[2025-12-08 16:30:30]     "exeErrorDiag": "",
[2025-12-08 16:30:30]     "pilotErrorCode": 0,
[2025-12-08 16:30:30]     "pilotErrorDiag": "",
[2025-12-08 16:30:30]  *** Listing of results directory ***
[2025-12-08 16:30:30] total 1303164
[2025-12-08 16:30:30] -rw-r--r-- 1 root root    576529 Nov 21 00:27 pilot3.tar.gz
[2025-12-08 16:30:30] -rw-r--r-- 1 root root      5112 Nov 21 00:57 queuedata.json
[2025-12-08 16:30:30] -rwx------ 1 4871 1028     36292 Nov 21 00:59 runpilot2-wrapper.sh
[2025-12-08 16:30:30] -rw-r--r-- 1 root root       100 Dec  7 23:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-08 16:30:30] -rwxr-xr-x 1 root root      7986 Dec  7 23:45 run_atlas
[2025-12-08 16:30:30] -rw-r--r-- 1 root root       105 Dec  7 23:45 job.xml
[2025-12-08 16:30:30] -rw-r--r-- 2 root root 407580686 Dec  7 23:45 EVNT.47493127._002336.pool.root.1
[2025-12-08 16:30:30] drwxrwx--x 2 root root      4096 Dec  7 23:45 shared
[2025-12-08 16:30:30] -rw-r--r-- 2 root root    590100 Dec  7 23:45 input.tar.gz
[2025-12-08 16:30:30] -rw-r--r-- 2 root root     15847 Dec  7 23:45 start_atlas.sh
[2025-12-08 16:30:30] -rw-r--r-- 1 root root         0 Dec  7 23:45 boinc_lockfile
[2025-12-08 16:30:30] -rw-r--r-- 1 root root      2786 Dec  7 23:45 pandaJob.out
[2025-12-08 16:30:30] -rw------- 1 root root    981501 Dec  7 23:45 agis_schedconf.cvmfs.json
[2025-12-08 16:30:30] drwxr-xr-x 5  320  320      4096 Dec  7 23:45 pilot3
[2025-12-08 16:30:30] -rw-r--r-- 1 root root      7074 Dec  8 11:45 init_data.xml
[2025-12-08 16:30:30] -rw-r--r-- 1 root root       533 Dec  8 16:21 boinc_task_state.xml
[2025-12-08 16:30:30] -rw------- 1 root root 901164060 Dec  8 16:29 HITS.47533967._003072.pool.root.1
[2025-12-08 16:30:30] -rw------- 1 root root        95 Dec  8 16:29 pilot_heartbeat.json
[2025-12-08 16:30:30] -rw------- 1 root root      1055 Dec  8 16:29 memory_monitor_summary.json
[2025-12-08 16:30:30] -rw------- 1 root root   1516240 Dec  8 16:29 agis_ddmendpoints.agis.ALL.json
[2025-12-08 16:30:30] -rw------- 1 root root   2349920 Dec  8 16:29 log.47533967._003072.job.log.tgz.1
[2025-12-08 16:30:30] -rw------- 1 root root      8616 Dec  8 16:29 heartbeat.json
[2025-12-08 16:30:30] -rw------- 1 root root       823 Dec  8 16:30 pilotlog.txt
[2025-12-08 16:30:30] -rw-r--r-- 1 root root      8192 Dec  8 16:30 boinc_mmap_file
[2025-12-08 16:30:30] -rw-r--r-- 1 root root        29 Dec  8 16:30 wrapper_checkpoint.txt
[2025-12-08 16:30:30] -rw------- 1 root root   8547183 Dec  8 16:30 log.47533967._003072.job.log.1
[2025-12-08 16:30:30] -rw------- 1 root root       353 Dec  8 16:30 output.list
[2025-12-08 16:30:30] -rw-r--r-- 1 root root       620 Dec  8 16:30 runtime_log
[2025-12-08 16:30:30] -rw------- 1 root root  10915840 Dec  8 16:30 result.tar.gz
[2025-12-08 16:30:30] -rw-r--r-- 1 root root      9021 Dec  8 16:30 runtime_log.err
[2025-12-08 16:30:30] -rw------- 1 root root       662 Dec  8 16:30 8boKDm79bg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmREJKDmqRUa9n.diag
[2025-12-08 16:30:30] -rw-r--r-- 1 root root     21442 Dec  8 16:30 stderr.txt
[2025-12-08 16:30:30] HITS file was successfully produced:
[2025-12-08 16:30:30] -rw------- 1 root root 901164060 Dec  8 16:29 shared/HITS.pool.root.1
[2025-12-08 16:30:30]  *** Contents of shared directory: ***
[2025-12-08 16:30:30] total 1289340
[2025-12-08 16:30:30] -rw-r--r-- 2 root root 407580686 Dec  7 23:45 ATLAS.root_0
[2025-12-08 16:30:30] -rw-r--r-- 2 root root    590100 Dec  7 23:45 input.tar.gz
[2025-12-08 16:30:30] -rw-r--r-- 2 root root     15847 Dec  7 23:45 start_atlas.sh
[2025-12-08 16:30:30] -rw------- 1 root root 901164060 Dec  8 16:29 HITS.pool.root.1
[2025-12-08 16:30:30] -rw------- 1 root root  10915840 Dec  8 16:30 result.tar.gz
16:30:31 (3495627): run_atlas exited; CPU time 133567.773140
16:30:31 (3495627): called boinc_finish(0)

</stderr_txt>
]]>

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