Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
16:35:14 (3375426): wrapper (7.7.26015): starting
16:35:14 (3375426): wrapper: running run_atlas (--nthreads 10)
[2025-12-08 16:35:14] Arguments: --nthreads 10
[2025-12-08 16:35:14] Threads: 10
[2025-12-08 16:35:14] Checking for CVMFS
[2025-12-08 16:35:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-08 16:35:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-08 16:35:15] Running cvmfs_config stat atlas.cern.ch
[2025-12-08 16:35:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-08 16:35:15] 2.13.3.0 8606 10495 65556 153787 2 110 3715765 4096001 10662 130560 0 34126058 99.975 1052312 676 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-12-08 16:35:15] CVMFS is ok
[2025-12-08 16:35:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-08 16:35:15] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-08 16:35:15] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-08 16:35:15] Further information can be found at the LHC@home message board.
[2025-12-08 16:35:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-08 16:35:15] Checking for apptainer binary...
[2025-12-08 16:35:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-08 16:35:15] Running /usr/bin/apptainer --version
[2025-12-08 16:35:16] apptainer version 1.4.2
[2025-12-08 16:35:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-08 16:35:16] 3950x-linux
[2025-12-08 16:35:16] apptainer works
[2025-12-08 16:35:16] Set ATHENA_PROC_NUMBER=10
[2025-12-08 16:35:16] Set ATHENA_CORE_NUMBER=10
[2025-12-08 16:35:16] Starting ATLAS job with PandaID=6895380024
[2025-12-08 16:35:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc242/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-09 09:12:42]  *** The last 200 lines of the pilot log: ***
[2025-12-09 09:12:42] 2025-12-09 17:12:09,245 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-09 09:12:42] 2025-12-09 17:12:09,252 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3400.1228437499994
[2025-12-09 09:12:42] 2025-12-09 17:12:09,265 | INFO     | using path: /var/lib/multiboinc/boinc242/slots/1/PanDA_Pilot-6895380024/memory_monitor_summary.json (trf name=prmon)
[2025-12-09 09:12:42] 2025-12-09 17:12:09,265 | INFO     | extracted standard info from prmon json
[2025-12-09 09:12:42] 2025-12-09 17:12:09,265 | INFO     | extracted standard memory fields from prmon json
[2025-12-09 09:12:42] 2025-12-09 17:12:09,265 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-09 09:12:42] 2025-12-09 17:12:09,291 | INFO     | fitting pss+swap vs Time
[2025-12-09 09:12:42] 2025-12-09 17:12:09,292 | INFO     | sum of square deviations: 290934625730.1658
[2025-12-09 09:12:42] 2025-12-09 17:12:09,328 | INFO     | sum of deviations: 2515624019319.5273
[2025-12-09 09:12:42] 2025-12-09 17:12:09,332 | INFO     | mean x: 1765270467.814096
[2025-12-09 09:12:42] 2025-12-09 17:12:09,332 | INFO     | mean y: 3112541.382022472
[2025-12-09 09:12:42] 2025-12-09 17:12:09,332 | INFO     | intersect: -15260649131.136269
[2025-12-09 09:12:42] 2025-12-09 17:12:09,333 | INFO     | chi2: 10.060599533284234
[2025-12-09 09:12:42] 2025-12-09 17:12:09,334 | INFO     | sum of square deviations: 286500247922.86676
[2025-12-09 09:12:42] 2025-12-09 17:12:09,370 | INFO     | sum of deviations: 2892173627314.9927
[2025-12-09 09:12:42] 2025-12-09 17:12:09,370 | INFO     | mean x: 1765270315.328542
[2025-12-09 09:12:42] 2025-12-09 17:12:09,370 | INFO     | mean y: 3125490.212525667
[2025-12-09 09:12:42] 2025-12-09 17:12:09,370 | INFO     | intersect: -17816992600.748966
[2025-12-09 09:12:42] 2025-12-09 17:12:09,371 | INFO     | chi2: 6.546663859702627
[2025-12-09 09:12:42] 2025-12-09 17:12:09,371 | INFO     | current chi2=6.546663859702627 (change=34.9276965250052 %)
[2025-12-09 09:12:42] 2025-12-09 17:12:09,375 | INFO     | sum of square deviations: 282110995306.2055
[2025-12-09 09:12:42] 2025-12-09 17:12:09,412 | INFO     | sum of deviations: 3081876557904.1064
[2025-12-09 09:12:42] 2025-12-09 17:12:09,413 | INFO     | mean x: 1765270162.8400412
[2025-12-09 09:12:42] 2025-12-09 17:12:09,413 | INFO     | mean y: 3132071.42002064
[2025-12-09 09:12:42] 2025-12-09 17:12:09,413 | INFO     | intersect: -19281280176.742424
[2025-12-09 09:12:42] 2025-12-09 17:12:09,414 | INFO     | chi2: 5.239872832401181
[2025-12-09 09:12:42] 2025-12-09 17:12:09,414 | INFO     | current chi2=5.239872832401181 (change=19.961174963408084 %)
[2025-12-09 09:12:42] 2025-12-09 17:12:09,414 | INFO     | right removable region: 968
[2025-12-09 09:12:42] 2025-12-09 17:12:09,418 | INFO     | sum of square deviations: 286498567372.86664
[2025-12-09 09:12:42] 2025-12-09 17:12:09,453 | INFO     | sum of deviations: 2115847261620.063
[2025-12-09 09:12:42] 2025-12-09 17:12:09,455 | INFO     | mean x: 1765270620.328542
[2025-12-09 09:12:42] 2025-12-09 17:12:09,455 | INFO     | mean y: 3126281.6560574947
[2025-12-09 09:12:42] 2025-12-09 17:12:09,455 | INFO     | intersect: -13033738238.435883
[2025-12-09 09:12:42] 2025-12-09 17:12:09,458 | INFO     | chi2: 6.396494231432773
[2025-12-09 09:12:42] 2025-12-09 17:12:09,458 | INFO     | current chi2=6.396494231432773 (change=36.42034741298695 %)
[2025-12-09 09:12:42] 2025-12-09 17:12:09,459 | INFO     | sum of square deviations: 282107989708.2058
[2025-12-09 09:12:42] 2025-12-09 17:12:09,494 | INFO     | sum of deviations: 1877996297780.9185
[2025-12-09 09:12:42] 2025-12-09 17:12:09,498 | INFO     | mean x: 1765270772.8400412
[2025-12-09 09:12:42] 2025-12-09 17:12:09,498 | INFO     | mean y: 3134538.012383901
[2025-12-09 09:12:42] 2025-12-09 17:12:09,498 | INFO     | intersect: -11748294336.45323
[2025-12-09 09:12:42] 2025-12-09 17:12:09,499 | INFO     | chi2: 5.170032760569193
[2025-12-09 09:12:42] 2025-12-09 17:12:09,499 | INFO     | current chi2=5.170032760569193 (change=19.173963525780596 %)
[2025-12-09 09:12:42] 2025-12-09 17:12:09,499 | INFO     | left removable region: 20
[2025-12-09 09:12:42] 2025-12-09 17:12:09,500 | INFO     | sum of square deviations: 264162023371.77502
[2025-12-09 09:12:42] 2025-12-09 17:12:09,533 | INFO     | sum of deviations: 2281405129235.9917
[2025-12-09 09:12:42] 2025-12-09 17:12:09,534 | INFO     | mean x: 1765270742.357595
[2025-12-09 09:12:42] 2025-12-09 17:12:09,534 | INFO     | mean y: 3160725.3628691984
[2025-12-09 09:12:42] 2025-12-09 17:12:09,534 | INFO     | intersect: -15242398324.724075
[2025-12-09 09:12:42] 2025-12-09 17:12:09,537 | INFO     | chi2: 0.14081690287101267
[2025-12-09 09:12:42] 2025-12-09 17:12:09,538 | INFO     | current memory leak: 8.64 B/s (using 948 data points, chi2=0.14)
[2025-12-09 09:12:42] 2025-12-09 17:12:09,538 | INFO     | could have reported an average CPU frequency of 3400 MHz (36 samples)
[2025-12-09 09:12:42] 2025-12-09 17:12:09,539 | INFO     | ..............................
[2025-12-09 09:12:42] 2025-12-09 17:12:09,539 | INFO     | . Timing measurements:
[2025-12-09 09:12:42] 2025-12-09 17:12:09,539 | INFO     | . get job = 0 s
[2025-12-09 09:12:42] 2025-12-09 17:12:09,539 | INFO     | . initial setup = 5 s
[2025-12-09 09:12:42] 2025-12-09 17:12:09,539 | INFO     | . payload setup = 21 s
[2025-12-09 09:12:42] 2025-12-09 17:12:09,539 | INFO     | . stage-in = 0 s
[2025-12-09 09:12:42] 2025-12-09 17:12:09,539 | INFO     | . payload execution = 59687 s
[2025-12-09 09:12:42] 2025-12-09 17:12:09,539 | INFO     | . stage-out = 4 s
[2025-12-09 09:12:42] 2025-12-09 17:12:09,539 | INFO     | . log creation = 1 s
[2025-12-09 09:12:42] 2025-12-09 17:12:09,539 | INFO     | ..............................
[2025-12-09 09:12:42] 2025-12-09 17:12:09,704 | INFO     | 
[2025-12-09 09:12:42] 2025-12-09 17:12:09,704 | INFO     | job summary report
[2025-12-09 09:12:42] 2025-12-09 17:12:09,704 | INFO     | --------------------------------------------------
[2025-12-09 09:12:42] 2025-12-09 17:12:09,704 | INFO     | PanDA job id: 6895380024
[2025-12-09 09:12:42] 2025-12-09 17:12:09,704 | INFO     | task id: 47556137
[2025-12-09 09:12:42] 2025-12-09 17:12:09,704 | INFO     | errors: (none)
[2025-12-09 09:12:42] 2025-12-09 17:12:09,704 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-09 09:12:42] 2025-12-09 17:12:09,704 | INFO     | pilot state: finished 
[2025-12-09 09:12:42] 2025-12-09 17:12:09,704 | INFO     | transexitcode: 0
[2025-12-09 09:12:42] 2025-12-09 17:12:09,704 | INFO     | exeerrorcode: 0
[2025-12-09 09:12:42] 2025-12-09 17:12:09,704 | INFO     | exeerrordiag: 
[2025-12-09 09:12:42] 2025-12-09 17:12:09,704 | INFO     | exitcode: 0
[2025-12-09 09:12:42] 2025-12-09 17:12:09,705 | INFO     | exitmsg: OK
[2025-12-09 09:12:42] 2025-12-09 17:12:09,705 | INFO     | cpuconsumptiontime: 210245 s
[2025-12-09 09:12:42] 2025-12-09 17:12:09,705 | INFO     | nevents: 1000
[2025-12-09 09:12:42] 2025-12-09 17:12:09,705 | INFO     | neventsw: 0
[2025-12-09 09:12:42] 2025-12-09 17:12:09,705 | INFO     | pid: 3386079
[2025-12-09 09:12:42] 2025-12-09 17:12:09,705 | INFO     | pgrp: 3386079
[2025-12-09 09:12:42] 2025-12-09 17:12:09,705 | INFO     | corecount: 10
[2025-12-09 09:12:42] 2025-12-09 17:12:09,705 | INFO     | event service: False
[2025-12-09 09:12:42] 2025-12-09 17:12:09,705 | INFO     | sizes: {0: 2284158, 1: 2284357, 2: 2284357, 13: 2284385, 20: 2284703, 23: 2284731, 59712: 2339213, 59718: 2348235, 59721: 2348291, 59731: 2348537}
[2025-12-09 09:12:42] 2025-12-09 17:12:09,705 | INFO     | --------------------------------------------------
[2025-12-09 09:12:42] 2025-12-09 17:12:09,705 | INFO     | 
[2025-12-09 09:12:42] 2025-12-09 17:12:09,705 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc242/slots/1
[2025-12-09 09:12:42] 2025-12-09 17:12:09,752 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-09 09:12:42] 2025-12-09 17:12:09,752 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-09 09:12:42] 2025-12-09 17:12:09,752 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-09 09:12:42] 2025-12-09 17:12:09,752 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-09 09:12:42] 2025-12-09 17:12:09,752 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-09 09:12:42] 2025-12-09 17:12:09,752 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-09 09:12:42] 2025-12-09 17:12:09,752 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-09 09:12:42] 2025-12-09 17:12:09,752 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-09 09:12:42] 2025-12-09 17:12:09,752 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-09 09:12:42] 2025-12-09 17:12:09,753 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-09 09:12:42] 2025-12-09 17:12:09,753 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-09 09:12:42] 2025-12-09 17:12:09,753 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-09 09:12:42] 2025-12-09 17:12:09,753 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-09 09:12:42] 2025-12-09 17:12:09,753 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-09 09:12:42] 2025-12-09 17:12:09,753 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-09 09:12:42] 2025-12-09 17:12:09,753 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-09 09:12:42] 2025-12-09 17:12:09,753 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-09 09:12:42] 2025-12-09 17:12:09,753 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-09 09:12:42] 2025-12-09 17:12:09,753 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-09 09:12:42] 2025-12-09 17:12:09,753 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-09 09:12:42] 2025-12-09 17:12:09,753 | INFO     | job 6895380024 has completed (purged errors)
[2025-12-09 09:12:42] 2025-12-09 17:12:09,754 | INFO     | overall cleanup function is called
[2025-12-09 09:12:42] 2025-12-09 17:12:10,788 | INFO     | --- collectZombieJob: --- 10, [3386079]
[2025-12-09 09:12:42] 2025-12-09 17:12:10,788 | INFO     | zombie collector waiting for pid 3386079
[2025-12-09 09:12:42] 2025-12-09 17:12:10,788 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-09 09:12:42] 2025-12-09 17:12:10,788 | INFO     | collected zombie processes
[2025-12-09 09:12:42] 2025-12-09 17:12:10,788 | INFO     | will attempt to kill all subprocesses of pid=3386079
[2025-12-09 09:12:42] 2025-12-09 17:12:11,258 | INFO     | process IDs to be killed: [3386079] (in reverse order)
[2025-12-09 09:12:42] 2025-12-09 17:12:11,416 | WARNING  | found no corresponding commands to process id(s)
[2025-12-09 09:12:42] 2025-12-09 17:12:11,417 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-09 09:12:42] 2025-12-09 17:12:11,429 | INFO     | did not find any defunct processes belonging to 3386079
[2025-12-09 09:12:42] 2025-12-09 17:12:11,441 | INFO     | did not find any defunct processes belonging to 3386079
[2025-12-09 09:12:42] 2025-12-09 17:12:11,442 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-09 09:12:42] 2025-12-09 17:12:11,442 | INFO     | ready for new job
[2025-12-09 09:12:42] 2025-12-09 17:12:11,443 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-09 09:12:42] 2025-12-09 17:12:11,451 | INFO     | ***************************************
[2025-12-09 09:12:42] 2025-12-09 17:12:11,451 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-09 09:12:42] 2025-12-09 17:12:11,451 | INFO     | ***************************************
[2025-12-09 09:12:42] 2025-12-09 17:12:11,451 | INFO     | 
[2025-12-09 09:12:42] 2025-12-09 17:12:11,457 | INFO     | architecture information:
[2025-12-09 09:12:42] 2025-12-09 17:12:11,459 | INFO     | executing command: cat /etc/os-release
[2025-12-09 09:12:42] 2025-12-09 17:12:11,489 | INFO     | cat /etc/os-release:
[2025-12-09 09:12:42] NAME="CentOS Linux"
[2025-12-09 09:12:42] VERSION="7 (Core)"
[2025-12-09 09:12:42] ID="centos"
[2025-12-09 09:12:42] ID_LIKE="rhel fedora"
[2025-12-09 09:12:42] VERSION_ID="7"
[2025-12-09 09:12:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-09 09:12:42] ANSI_COLOR="0;31"
[2025-12-09 09:12:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-09 09:12:42] HOME_URL="https://www.centos.org/"
[2025-12-09 09:12:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-09 09:12:42] 
[2025-12-09 09:12:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-09 09:12:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-09 09:12:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-09 09:12:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-09 09:12:42] 
[2025-12-09 09:12:42] 2025-12-09 17:12:11,489 | INFO     | ***************************************
[2025-12-09 09:12:42] 2025-12-09 17:12:11,993 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc242/slots/1
[2025-12-09 09:12:42] 2025-12-09 17:12:12,022 | INFO     | sufficient remaining disk space (80605085696 B)
[2025-12-09 09:12:42] 2025-12-09 17:12:12,023 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-09 09:12:42] 2025-12-09 17:12:12,023 | INFO     | current server update state: UPDATING_FINAL
[2025-12-09 09:12:42] 2025-12-09 17:12:12,023 | INFO     | update_server=False
[2025-12-09 09:12:42] 2025-12-09 17:12:12,023 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-09 09:12:42] 2025-12-09 17:12:12,043 | INFO     | all payload control threads have been joined
[2025-12-09 09:12:42] 2025-12-09 17:12:12,434 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-09 09:12:42] 2025-12-09 17:12:12,435 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-09 09:12:42] 2025-12-09 17:12:12,435 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-09 09:12:42] 2025-12-09 17:12:12,435 | INFO     | will abort loop
[2025-12-09 09:12:42] 2025-12-09 17:12:12,458 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-09 09:12:42] 2025-12-09 17:12:12,745 | INFO     | all data control threads have been joined
[2025-12-09 09:12:42] 2025-12-09 17:12:13,016 | INFO     | all job control threads have been joined
[2025-12-09 09:12:42] 2025-12-09 17:12:13,029 | INFO     | [job] retrieve thread has finished
[2025-12-09 09:12:42] 2025-12-09 17:12:13,048 | INFO     | [payload] control thread has finished
[2025-12-09 09:12:42] 2025-12-09 17:12:13,118 | INFO     | [job] create_data_payload thread has finished
[2025-12-09 09:12:42] 2025-12-09 17:12:13,133 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-09 09:12:42] 2025-12-09 17:12:13,440 | INFO     | [job] job monitor thread has finished
[2025-12-09 09:12:42] 2025-12-09 17:12:13,456 | INFO     | [payload] failed_post thread has finished
[2025-12-09 09:12:42] 2025-12-09 17:12:13,751 | INFO     | [data] control thread has finished
[2025-12-09 09:12:42] 2025-12-09 17:12:13,785 | INFO     | [data] copytool_in thread has finished
[2025-12-09 09:12:42] 2025-12-09 17:12:14,022 | INFO     | [job] control thread has finished
[2025-12-09 09:12:42] 2025-12-09 17:12:14,281 | INFO     | [payload] validate_pre thread has finished
[2025-12-09 09:12:42] 2025-12-09 17:12:14,463 | INFO     | [data] copytool_out thread has finished
[2025-12-09 09:12:42] 2025-12-09 17:12:14,514 | INFO     | [job] validate thread has finished
[2025-12-09 09:12:42] 2025-12-09 17:12:14,518 | INFO     | [payload] execute_payloads thread has finished
[2025-12-09 09:12:42] 2025-12-09 17:12:14,560 | INFO     | [payload] validate_post thread has finished
[2025-12-09 09:12:42] 2025-12-09 17:12:14,726 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-09 09:12:42] 2025-12-09 17:12:14,742 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-09 09:12:42] 2025-12-09 17:12:15,732 | INFO     | [job] queue monitor thread has finished
[2025-12-09 09:12:42] 2025-12-09 17:12:18,748 | INFO     | [data] queue_monitor thread has finished
[2025-12-09 09:12:42] 2025-12-09 17:12:35,590 | INFO     | [monitor] cgroup control has ended
[2025-12-09 09:12:42] 2025-12-09 17:12:36,926 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127833971648320)>', '<ExcThread(monitor, started 127833619801856)>']
[2025-12-09 09:12:42] 2025-12-09 17:12:41,962 | INFO     | all workflow threads have been joined
[2025-12-09 09:12:42] 2025-12-09 17:12:41,962 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-09 09:12:42] 2025-12-09 17:12:41,962 | INFO     | traces error code: 0
[2025-12-09 09:12:42] 2025-12-09 17:12:41,962 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-09 09:12:42] 2025-12-09 17:12:42,188 | INFO     | PID=3379306 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-09 09:12:42] 2025-12-09 17:12:42,189 | INFO     | .. there are 7 such processes running
[2025-12-09 09:12:42] 2025-12-09 17:12:42,192 | INFO     | found 0 job(s) in 20 queues
[2025-12-09 09:12:42] 2025-12-09 17:12:42,193 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-09 09:12:42] 2025-12-09 17:12:42,193 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-09 09:12:42] 2025-12-09 17:12:42,193 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-09 09:12:42] 2025-12-09 17:12:42,193 | INFO     | [monitor] control thread has ended
[2025-12-09 09:12:42] 2025-12-09 17:12:42,397 [wrapper] ==== pilot stdout END ====
[2025-12-09 09:12:42] 2025-12-09 17:12:42,404 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-09 09:12:42] 2025-12-09 17:12:42,410 [wrapper] pilotpid: 3379306
[2025-12-09 09:12:42] 2025-12-09 17:12:42,416 [wrapper] Pilot exit status: 0
[2025-12-09 09:12:42] 2025-12-09 17:12:42,437 [wrapper] pandaids: 6895380024
[2025-12-09 09:12:42] 2025-12-09 17:12:42,558 [wrapper] cleanup supervisor_pilot   93009 3379307
[2025-12-09 09:12:42] ./runpilot2-wrapper.sh: line 615: 93009 Terminated              sleep 900
[2025-12-09 09:12:42] 2025-12-09 17:12:42,574 [wrapper] Test setup, not cleaning
[2025-12-09 09:12:42] 2025-12-09 17:12:42,581 [wrapper] apfmon messages muted
[2025-12-09 09:12:42] 2025-12-09 17:12:42,591 [wrapper] ==== wrapper stdout END ====
[2025-12-09 09:12:42] 2025-12-09 17:12:42,597 [wrapper] ==== wrapper stderr END ====
[2025-12-09 09:12:42]  *** Error codes and diagnostics ***
[2025-12-09 09:12:42]     "exeErrorCode": 0,
[2025-12-09 09:12:42]     "exeErrorDiag": "",
[2025-12-09 09:12:42]     "pilotErrorCode": 0,
[2025-12-09 09:12:42]     "pilotErrorDiag": "",
[2025-12-09 09:12:42]  *** Listing of results directory ***
[2025-12-09 09:12:42] total 1335972
[2025-12-09 09:12:42] -rw-r--r-- 1 root root    576529 Nov 23 18:30 pilot3.tar.gz
[2025-12-09 09:12:42] -rwx------ 1 4871 1028     36292 Nov 23 18:41 runpilot2-wrapper.sh
[2025-12-09 09:12:42] -rw-r--r-- 1 root root      5112 Nov 23 18:41 queuedata.json
[2025-12-09 09:12:42] -rw-r--r-- 1 root root       100 Dec  8 16:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-09 09:12:42] -rwxr-xr-x 1 root root      7986 Dec  8 16:35 run_atlas
[2025-12-09 09:12:42] -rw-r--r-- 1 root root       105 Dec  8 16:35 job.xml
[2025-12-09 09:12:42] -rw-r--r-- 2 root root 408287074 Dec  8 16:35 EVNT.47483658._000985.pool.root.1
[2025-12-09 09:12:42] drwxrwx--x 2 root root      4096 Dec  8 16:35 shared
[2025-12-09 09:12:42] -rw-r--r-- 2 root root    590101 Dec  8 16:35 input.tar.gz
[2025-12-09 09:12:42] -rw-r--r-- 2 root root     15847 Dec  8 16:35 start_atlas.sh
[2025-12-09 09:12:42] -rw-r--r-- 1 root root         0 Dec  8 16:35 boinc_setup_complete
[2025-12-09 09:12:42] -rw-r--r-- 1 root root      9229 Dec  8 16:35 init_data.xml
[2025-12-09 09:12:42] -rw-r--r-- 1 root root         0 Dec  8 16:35 boinc_lockfile
[2025-12-09 09:12:42] -rw-r--r-- 1 root root      2786 Dec  8 16:35 pandaJob.out
[2025-12-09 09:12:42] -rw------- 1 root root    981530 Dec  8 16:35 agis_schedconf.cvmfs.json
[2025-12-09 09:12:42] drwxr-xr-x 5  320  320      4096 Dec  8 16:35 pilot3
[2025-12-09 09:12:42] -rw-r--r-- 1 root root       533 Dec  9 09:00 boinc_task_state.xml
[2025-12-09 09:12:42] -rw------- 1 root root 934459153 Dec  9 09:11 HITS.47556137._009717.pool.root.1
[2025-12-09 09:12:42] -rw------- 1 root root      1037 Dec  9 09:11 memory_monitor_summary.json
[2025-12-09 09:12:42] -rw------- 1 root root   1516240 Dec  9 09:11 agis_ddmendpoints.agis.ALL.json
[2025-12-09 09:12:42] -rw------- 1 root root   2388144 Dec  9 09:11 log.47556137._009717.job.log.tgz.1
[2025-12-09 09:12:42] -rw------- 1 root root      8570 Dec  9 09:12 heartbeat.json
[2025-12-09 09:12:42] -rw-r--r-- 1 root root      8192 Dec  9 09:12 boinc_mmap_file
[2025-12-09 09:12:42] -rw-r--r-- 1 root root        29 Dec  9 09:12 wrapper_checkpoint.txt
[2025-12-09 09:12:42] -rw------- 1 root root        95 Dec  9 09:12 pilot_heartbeat.json
[2025-12-09 09:12:42] -rw------- 1 root root       822 Dec  9 09:12 pilotlog.txt
[2025-12-09 09:12:42] -rw------- 1 root root   8298565 Dec  9 09:12 log.47556137._009717.job.log.1
[2025-12-09 09:12:42] -rw------- 1 root root       353 Dec  9 09:12 output.list
[2025-12-09 09:12:42] -rw-r--r-- 1 root root       620 Dec  9 09:12 runtime_log
[2025-12-09 09:12:42] -rw------- 1 root root  10711040 Dec  9 09:12 result.tar.gz
[2025-12-09 09:12:42] -rw-r--r-- 1 root root      9021 Dec  9 09:12 runtime_log.err
[2025-12-09 09:12:42] -rw------- 1 root root       656 Dec  9 09:12 AhAMDmwgbh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm8sIKDmatDmom.diag
[2025-12-09 09:12:42] -rw-r--r-- 1 root root     21425 Dec  9 09:12 stderr.txt
[2025-12-09 09:12:42] HITS file was successfully produced:
[2025-12-09 09:12:42] -rw------- 1 root root 934459153 Dec  9 09:11 shared/HITS.pool.root.1
[2025-12-09 09:12:42]  *** Contents of shared directory: ***
[2025-12-09 09:12:42] total 1322344
[2025-12-09 09:12:42] -rw-r--r-- 2 root root 408287074 Dec  8 16:35 ATLAS.root_0
[2025-12-09 09:12:42] -rw-r--r-- 2 root root    590101 Dec  8 16:35 input.tar.gz
[2025-12-09 09:12:42] -rw-r--r-- 2 root root     15847 Dec  8 16:35 start_atlas.sh
[2025-12-09 09:12:42] -rw------- 1 root root 934459153 Dec  9 09:11 HITS.pool.root.1
[2025-12-09 09:12:42] -rw------- 1 root root  10711040 Dec  9 09:12 result.tar.gz
09:12:44 (3375426): run_atlas exited; CPU time 210221.686973
09:12:44 (3375426): called boinc_finish(0)

</stderr_txt>
]]>

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