Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
09:11:28 (99876): wrapper (7.7.26015): starting
09:11:28 (99876): wrapper: running run_atlas (--nthreads 10)
[2025-12-09 09:11:28] Arguments: --nthreads 10
[2025-12-09 09:11:28] Threads: 10
[2025-12-09 09:11:28] Checking for CVMFS
[2025-12-09 09:11:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-09 09:11:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-09 09:11:29] Running cvmfs_config stat atlas.cern.ch
[2025-12-09 09:11:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-09 09:11:29] 2.13.3.0 8606 11491 65596 153812 0 101 4078621 4096001 5232 130560 0 36863446 99.976 1118773 689 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-12-09 09:11:29] CVMFS is ok
[2025-12-09 09:11:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-09 09:11:29] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-09 09:11:29] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-09 09:11:29] Further information can be found at the LHC@home message board.
[2025-12-09 09:11:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-09 09:11:29] Checking for apptainer binary...
[2025-12-09 09:11:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-09 09:11:29] Running /usr/bin/apptainer --version
[2025-12-09 09:11:29] apptainer version 1.4.2
[2025-12-09 09:11:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-09 09:11:30] 3950x-linux
[2025-12-09 09:11:30] apptainer works
[2025-12-09 09:11:30] Set ATHENA_PROC_NUMBER=10
[2025-12-09 09:11:30] Set ATHENA_CORE_NUMBER=10
[2025-12-09 09:11:30] Starting ATLAS job with PandaID=6895379515
[2025-12-09 09:11:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc242/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-09 22:50:42]  *** The last 200 lines of the pilot log: ***
[2025-12-09 22:50:42] 2025-12-10 06:50:08,064 | INFO     | monitor loop #3395: job 0:6895379515 is in state 'finished'
[2025-12-09 22:50:42] 2025-12-10 06:50:08,065 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-09 22:50:42] 2025-12-10 06:50:08,165 | INFO     | time since job start (49095s) is within the limit (172800.0s)
[2025-12-09 22:50:42] 2025-12-10 06:50:09,734 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-09 22:50:42] 2025-12-10 06:50:09,741 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3400.1231249999996
[2025-12-09 22:50:42] 2025-12-10 06:50:09,753 | INFO     | using path: /var/lib/multiboinc/boinc242/slots/2/PanDA_Pilot-6895379515/memory_monitor_summary.json (trf name=prmon)
[2025-12-09 22:50:42] 2025-12-10 06:50:09,757 | INFO     | extracted standard info from prmon json
[2025-12-09 22:50:42] 2025-12-10 06:50:09,757 | INFO     | extracted standard memory fields from prmon json
[2025-12-09 22:50:42] 2025-12-10 06:50:09,757 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-09 22:50:42] 2025-12-10 06:50:09,775 | INFO     | fitting pss+swap vs Time
[2025-12-09 22:50:42] 2025-12-10 06:50:09,779 | INFO     | sum of square deviations: 161156614553.77417
[2025-12-09 22:50:42] 2025-12-10 06:50:09,804 | INFO     | sum of deviations: 1359502785402.3145
[2025-12-09 22:50:42] 2025-12-10 06:50:09,804 | INFO     | mean x: 1765324850.8818407
[2025-12-09 22:50:42] 2025-12-10 06:50:09,804 | INFO     | mean y: 3152612.1927860696
[2025-12-09 22:50:42] 2025-12-10 06:50:09,804 | INFO     | intersect: -14888969926.86053
[2025-12-09 22:50:42] 2025-12-10 06:50:09,805 | INFO     | chi2: 6.911634768437336
[2025-12-09 22:50:42] 2025-12-10 06:50:09,809 | INFO     | sum of square deviations: 158169216995.23163
[2025-12-09 22:50:42] 2025-12-10 06:50:09,831 | INFO     | sum of deviations: 1657679917255.2214
[2025-12-09 22:50:42] 2025-12-10 06:50:09,831 | INFO     | mean x: 1765324698.396746
[2025-12-09 22:50:42] 2025-12-10 06:50:09,835 | INFO     | mean y: 3167836.008760951
[2025-12-09 22:50:42] 2025-12-10 06:50:09,836 | INFO     | intersect: -18498177467.199875
[2025-12-09 22:50:42] 2025-12-10 06:50:09,836 | INFO     | chi2: 3.7475155462440486
[2025-12-09 22:50:42] 2025-12-10 06:50:09,836 | INFO     | current chi2=3.7475155462440486 (change=45.77960682532808 %)
[2025-12-09 22:50:42] 2025-12-10 06:50:09,837 | INFO     | sum of square deviations: 155218837084.28864
[2025-12-09 22:50:42] 2025-12-10 06:50:09,860 | INFO     | sum of deviations: 1739154431378.1719
[2025-12-09 22:50:42] 2025-12-10 06:50:09,860 | INFO     | mean x: 1765324545.9080606
[2025-12-09 22:50:42] 2025-12-10 06:50:09,860 | INFO     | mean y: 3172040.9886649875
[2025-12-09 22:50:42] 2025-12-10 06:50:09,860 | INFO     | intersect: -19776463372.52409
[2025-12-09 22:50:42] 2025-12-10 06:50:09,861 | INFO     | chi2: 3.354045881981198
[2025-12-09 22:50:42] 2025-12-10 06:50:09,861 | INFO     | current chi2=3.354045881981198 (change=10.499480506684113 %)
[2025-12-09 22:50:42] 2025-12-10 06:50:09,861 | INFO     | right removable region: 793
[2025-12-09 22:50:42] 2025-12-10 06:50:09,865 | INFO     | sum of square deviations: 158168048845.23166
[2025-12-09 22:50:42] 2025-12-10 06:50:09,889 | INFO     | sum of deviations: 1063050404533.3256
[2025-12-09 22:50:42] 2025-12-10 06:50:09,890 | INFO     | mean x: 1765325003.396746
[2025-12-09 22:50:42] 2025-12-10 06:50:09,890 | INFO     | mean y: 3167729.8948685857
[2025-12-09 22:50:42] 2025-12-10 06:50:09,890 | INFO     | intersect: -11861614523.504475
[2025-12-09 22:50:42] 2025-12-10 06:50:09,891 | INFO     | chi2: 3.945506349224487
[2025-12-09 22:50:42] 2025-12-10 06:50:09,891 | INFO     | current chi2=3.945506349224487 (change=42.915005184561664 %)
[2025-12-09 22:50:42] 2025-12-10 06:50:09,894 | INFO     | sum of square deviations: 155217133795.94034
[2025-12-09 22:50:42] 2025-12-10 06:50:09,919 | INFO     | sum of deviations: 984675684589.2617
[2025-12-09 22:50:42] 2025-12-10 06:50:09,919 | INFO     | mean x: 1765325155.8992443
[2025-12-09 22:50:42] 2025-12-10 06:50:09,919 | INFO     | mean y: 3171780.103274559
[2025-12-09 22:50:42] 2025-12-10 06:50:09,919 | INFO     | intersect: -11195802932.913862
[2025-12-09 22:50:42] 2025-12-10 06:50:09,920 | INFO     | chi2: 3.8285912497595747
[2025-12-09 22:50:42] 2025-12-10 06:50:09,920 | INFO     | current chi2=3.8285912497595747 (change=2.9632470237411423 %)
[2025-12-09 22:50:42] 2025-12-10 06:50:09,920 | INFO     | left removable region: 20
[2025-12-09 22:50:42] 2025-12-10 06:50:09,921 | INFO     | sum of square deviations: 143225346417.2653
[2025-12-09 22:50:42] 2025-12-10 06:50:09,947 | INFO     | sum of deviations: 1248571045989.545
[2025-12-09 22:50:42] 2025-12-10 06:50:09,947 | INFO     | mean x: 1765325125.428202
[2025-12-09 22:50:42] 2025-12-10 06:50:09,947 | INFO     | mean y: 3197564.406209573
[2025-12-09 22:50:42] 2025-12-10 06:50:09,947 | INFO     | intersect: -15386074610.548813
[2025-12-09 22:50:42] 2025-12-10 06:50:09,951 | INFO     | chi2: 0.1627327674364865
[2025-12-09 22:50:42] 2025-12-10 06:50:09,951 | INFO     | current memory leak: 8.72 B/s (using 773 data points, chi2=0.16)
[2025-12-09 22:50:42] 2025-12-10 06:50:09,952 | INFO     | could have reported an average CPU frequency of 3400 MHz (30 samples)
[2025-12-09 22:50:42] 2025-12-10 06:50:09,952 | INFO     | ..............................
[2025-12-09 22:50:42] 2025-12-10 06:50:09,952 | INFO     | . Timing measurements:
[2025-12-09 22:50:42] 2025-12-10 06:50:09,952 | INFO     | . get job = 0 s
[2025-12-09 22:50:42] 2025-12-10 06:50:09,952 | INFO     | . initial setup = 4 s
[2025-12-09 22:50:42] 2025-12-10 06:50:09,952 | INFO     | . payload setup = 12 s
[2025-12-09 22:50:42] 2025-12-10 06:50:09,952 | INFO     | . stage-in = 0 s
[2025-12-09 22:50:42] 2025-12-10 06:50:09,952 | INFO     | . payload execution = 49043 s
[2025-12-09 22:50:42] 2025-12-10 06:50:09,952 | INFO     | . stage-out = 5 s
[2025-12-09 22:50:42] 2025-12-10 06:50:09,952 | INFO     | . log creation = 0 s
[2025-12-09 22:50:42] 2025-12-10 06:50:09,953 | INFO     | ..............................
[2025-12-09 22:50:42] 2025-12-10 06:50:10,108 | INFO     | 
[2025-12-09 22:50:42] 2025-12-10 06:50:10,108 | INFO     | job summary report
[2025-12-09 22:50:42] 2025-12-10 06:50:10,108 | INFO     | --------------------------------------------------
[2025-12-09 22:50:42] 2025-12-10 06:50:10,108 | INFO     | PanDA job id: 6895379515
[2025-12-09 22:50:42] 2025-12-10 06:50:10,108 | INFO     | task id: 47556137
[2025-12-09 22:50:42] 2025-12-10 06:50:10,108 | INFO     | errors: (none)
[2025-12-09 22:50:42] 2025-12-10 06:50:10,108 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-09 22:50:42] 2025-12-10 06:50:10,109 | INFO     | pilot state: finished 
[2025-12-09 22:50:42] 2025-12-10 06:50:10,109 | INFO     | transexitcode: 0
[2025-12-09 22:50:42] 2025-12-10 06:50:10,109 | INFO     | exeerrorcode: 0
[2025-12-09 22:50:42] 2025-12-10 06:50:10,109 | INFO     | exeerrordiag: 
[2025-12-09 22:50:42] 2025-12-10 06:50:10,109 | INFO     | exitcode: 0
[2025-12-09 22:50:42] 2025-12-10 06:50:10,109 | INFO     | exitmsg: OK
[2025-12-09 22:50:42] 2025-12-10 06:50:10,109 | INFO     | cpuconsumptiontime: 203868 s
[2025-12-09 22:50:42] 2025-12-10 06:50:10,109 | INFO     | nevents: 1000
[2025-12-09 22:50:42] 2025-12-10 06:50:10,109 | INFO     | neventsw: 0
[2025-12-09 22:50:42] 2025-12-10 06:50:10,109 | INFO     | pid: 112538
[2025-12-09 22:50:42] 2025-12-10 06:50:10,109 | INFO     | pgrp: 112538
[2025-12-09 22:50:42] 2025-12-10 06:50:10,109 | INFO     | corecount: 10
[2025-12-09 22:50:42] 2025-12-10 06:50:10,109 | INFO     | event service: False
[2025-12-09 22:50:42] 2025-12-10 06:50:10,109 | INFO     | sizes: {0: 2284158, 1: 2284357, 10: 2284619, 12: 2284647, 49059: 2333281, 49060: 2333280, 49065: 2342486, 49066: 2342542, 49075: 2342788}
[2025-12-09 22:50:42] 2025-12-10 06:50:10,109 | INFO     | --------------------------------------------------
[2025-12-09 22:50:42] 2025-12-10 06:50:10,109 | INFO     | 
[2025-12-09 22:50:42] 2025-12-10 06:50:10,109 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc242/slots/2
[2025-12-09 22:50:42] 2025-12-10 06:50:10,155 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-09 22:50:42] 2025-12-10 06:50:10,156 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-09 22:50:42] 2025-12-10 06:50:10,156 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-09 22:50:42] 2025-12-10 06:50:10,156 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-09 22:50:42] 2025-12-10 06:50:10,156 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-09 22:50:42] 2025-12-10 06:50:10,156 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-09 22:50:42] 2025-12-10 06:50:10,156 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-09 22:50:42] 2025-12-10 06:50:10,156 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-09 22:50:42] 2025-12-10 06:50:10,156 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-09 22:50:42] 2025-12-10 06:50:10,156 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-09 22:50:42] 2025-12-10 06:50:10,156 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-09 22:50:42] 2025-12-10 06:50:10,156 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-09 22:50:42] 2025-12-10 06:50:10,156 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-09 22:50:42] 2025-12-10 06:50:10,157 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-09 22:50:42] 2025-12-10 06:50:10,157 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-09 22:50:42] 2025-12-10 06:50:10,157 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-09 22:50:42] 2025-12-10 06:50:10,157 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-09 22:50:42] 2025-12-10 06:50:10,157 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-09 22:50:42] 2025-12-10 06:50:10,157 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-09 22:50:42] 2025-12-10 06:50:10,157 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-09 22:50:42] 2025-12-10 06:50:10,157 | INFO     | job 6895379515 has completed (purged errors)
[2025-12-09 22:50:42] 2025-12-10 06:50:10,157 | INFO     | overall cleanup function is called
[2025-12-09 22:50:42] 2025-12-10 06:50:11,189 | INFO     | --- collectZombieJob: --- 10, [112538]
[2025-12-09 22:50:42] 2025-12-10 06:50:11,190 | INFO     | zombie collector waiting for pid 112538
[2025-12-09 22:50:42] 2025-12-10 06:50:11,190 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-09 22:50:42] 2025-12-10 06:50:11,190 | INFO     | collected zombie processes
[2025-12-09 22:50:42] 2025-12-10 06:50:11,190 | INFO     | will attempt to kill all subprocesses of pid=112538
[2025-12-09 22:50:42] 2025-12-10 06:50:11,569 | INFO     | process IDs to be killed: [112538] (in reverse order)
[2025-12-09 22:50:42] 2025-12-10 06:50:11,720 | WARNING  | found no corresponding commands to process id(s)
[2025-12-09 22:50:42] 2025-12-10 06:50:11,721 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-09 22:50:42] 2025-12-10 06:50:11,733 | INFO     | did not find any defunct processes belonging to 112538
[2025-12-09 22:50:42] 2025-12-10 06:50:11,743 | INFO     | did not find any defunct processes belonging to 112538
[2025-12-09 22:50:42] 2025-12-10 06:50:11,750 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-09 22:50:42] 2025-12-10 06:50:11,750 | INFO     | ready for new job
[2025-12-09 22:50:42] 2025-12-10 06:50:11,750 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-09 22:50:42] 2025-12-10 06:50:11,757 | INFO     | ***************************************
[2025-12-09 22:50:42] 2025-12-10 06:50:11,757 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-09 22:50:42] 2025-12-10 06:50:11,757 | INFO     | ***************************************
[2025-12-09 22:50:42] 2025-12-10 06:50:11,757 | INFO     | 
[2025-12-09 22:50:42] 2025-12-10 06:50:11,759 | INFO     | architecture information:
[2025-12-09 22:50:42] 2025-12-10 06:50:11,763 | INFO     | executing command: cat /etc/os-release
[2025-12-09 22:50:42] 2025-12-10 06:50:11,793 | INFO     | cat /etc/os-release:
[2025-12-09 22:50:42] NAME="CentOS Linux"
[2025-12-09 22:50:42] VERSION="7 (Core)"
[2025-12-09 22:50:42] ID="centos"
[2025-12-09 22:50:42] ID_LIKE="rhel fedora"
[2025-12-09 22:50:42] VERSION_ID="7"
[2025-12-09 22:50:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-09 22:50:42] ANSI_COLOR="0;31"
[2025-12-09 22:50:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-09 22:50:42] HOME_URL="https://www.centos.org/"
[2025-12-09 22:50:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-09 22:50:42] 
[2025-12-09 22:50:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-09 22:50:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-09 22:50:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-09 22:50:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-09 22:50:42] 
[2025-12-09 22:50:42] 2025-12-10 06:50:11,794 | INFO     | ***************************************
[2025-12-09 22:50:42] 2025-12-10 06:50:12,296 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc242/slots/2
[2025-12-09 22:50:42] 2025-12-10 06:50:12,332 | INFO     | sufficient remaining disk space (84839235584 B)
[2025-12-09 22:50:42] 2025-12-10 06:50:12,332 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-09 22:50:42] 2025-12-10 06:50:12,332 | INFO     | current server update state: UPDATING_FINAL
[2025-12-09 22:50:42] 2025-12-10 06:50:12,333 | INFO     | update_server=False
[2025-12-09 22:50:42] 2025-12-10 06:50:12,333 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-09 22:50:42] 2025-12-10 06:50:12,334 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-09 22:50:42] 2025-12-10 06:50:12,334 | INFO     | aborting loop
[2025-12-09 22:50:42] 2025-12-10 06:50:12,951 | INFO     | all data control threads have been joined
[2025-12-09 22:50:42] 2025-12-10 06:50:13,032 | INFO     | all payload control threads have been joined
[2025-12-09 22:50:42] 2025-12-10 06:50:13,093 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-09 22:50:42] 2025-12-10 06:50:13,340 | INFO     | [job] job monitor thread has finished
[2025-12-09 22:50:42] 2025-12-10 06:50:13,340 | INFO     | [job] retrieve thread has finished
[2025-12-09 22:50:42] 2025-12-10 06:50:13,426 | INFO     | [job] create_data_payload thread has finished
[2025-12-09 22:50:42] 2025-12-10 06:50:13,629 | INFO     | all job control threads have been joined
[2025-12-09 22:50:42] 2025-12-10 06:50:13,677 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-09 22:50:42] 2025-12-10 06:50:13,957 | INFO     | [data] control thread has finished
[2025-12-09 22:50:42] 2025-12-10 06:50:14,000 | INFO     | [payload] validate_pre thread has finished
[2025-12-09 22:50:42] 2025-12-10 06:50:14,000 | INFO     | [job] validate thread has finished
[2025-12-09 22:50:42] 2025-12-10 06:50:14,038 | INFO     | [payload] control thread has finished
[2025-12-09 22:50:42] 2025-12-10 06:50:14,463 | INFO     | [payload] execute_payloads thread has finished
[2025-12-09 22:50:42] 2025-12-10 06:50:14,466 | INFO     | [payload] validate_post thread has finished
[2025-12-09 22:50:42] 2025-12-10 06:50:14,551 | INFO     | [payload] failed_post thread has finished
[2025-12-09 22:50:42] 2025-12-10 06:50:14,636 | INFO     | [job] control thread has finished
[2025-12-09 22:50:42] 2025-12-10 06:50:14,772 | INFO     | [data] copytool_in thread has finished
[2025-12-09 22:50:42] 2025-12-10 06:50:14,772 | INFO     | [monitor] cgroup control has ended
[2025-12-09 22:50:42] 2025-12-10 06:50:15,099 | INFO     | [data] copytool_out thread has finished
[2025-12-09 22:50:42] 2025-12-10 06:50:15,124 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-09 22:50:42] 2025-12-10 06:50:15,256 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-09 22:50:42] 2025-12-10 06:50:16,131 | INFO     | [job] queue monitor thread has finished
[2025-12-09 22:50:42] 2025-12-10 06:50:19,262 | INFO     | [data] queue_monitor thread has finished
[2025-12-09 22:50:42] 2025-12-10 06:50:19,385 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125999188154176)>', '<ExcThread(monitor, started 125998553093888)>']
[2025-12-09 22:50:42] 2025-12-10 06:50:24,409 | INFO     | all workflow threads have been joined
[2025-12-09 22:50:42] 2025-12-10 06:50:24,410 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-09 22:50:42] 2025-12-10 06:50:24,410 | INFO     | traces error code: 0
[2025-12-09 22:50:42] 2025-12-10 06:50:24,410 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-09 22:50:42] 2025-12-10 06:50:41,583 | INFO     | PID=103729 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-09 22:50:42] 2025-12-10 06:50:41,583 | INFO     | .. there are 6 such processes running
[2025-12-09 22:50:42] 2025-12-10 06:50:41,583 | INFO     | found 0 job(s) in 20 queues
[2025-12-09 22:50:42] 2025-12-10 06:50:41,583 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-09 22:50:42] 2025-12-10 06:50:41,584 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-09 22:50:42] 2025-12-10 06:50:41,584 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-09 22:50:42] 2025-12-10 06:50:41,584 | INFO     | [monitor] control thread has ended
[2025-12-09 22:50:42] 2025-12-10 06:50:41,711 [wrapper] ==== pilot stdout END ====
[2025-12-09 22:50:42] 2025-12-10 06:50:41,716 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-09 22:50:42] 2025-12-10 06:50:41,723 [wrapper] pilotpid: 103729
[2025-12-09 22:50:42] 2025-12-10 06:50:41,735 [wrapper] Pilot exit status: 0
[2025-12-09 22:50:42] 2025-12-10 06:50:41,770 [wrapper] pandaids: 6895379515
[2025-12-09 22:50:42] 2025-12-10 06:50:41,866 [wrapper] cleanup supervisor_pilot  783445 103730
[2025-12-09 22:50:42] 2025-12-10 06:50:41,873 [wrapper] Test setup, not cleaning
[2025-12-09 22:50:42] 2025-12-10 06:50:41,879 [wrapper] apfmon messages muted
[2025-12-09 22:50:42] 2025-12-10 06:50:41,885 [wrapper] ==== wrapper stdout END ====
[2025-12-09 22:50:42] 2025-12-10 06:50:41,891 [wrapper] ==== wrapper stderr END ====
[2025-12-09 22:50:42]  *** Error codes and diagnostics ***
[2025-12-09 22:50:42]     "exeErrorCode": 0,
[2025-12-09 22:50:42]     "exeErrorDiag": "",
[2025-12-09 22:50:42]     "pilotErrorCode": 0,
[2025-12-09 22:50:42]     "pilotErrorDiag": "",
[2025-12-09 22:50:42]  *** Listing of results directory ***
[2025-12-09 22:50:42] total 1312588
[2025-12-09 22:50:42] -rw-r--r-- 1 root root    576529 Nov 23 18:14 pilot3.tar.gz
[2025-12-09 22:50:42] -rw-r--r-- 1 root root      5112 Nov 23 18:20 queuedata.json
[2025-12-09 22:50:42] -rwx------ 1 4871 1028     36292 Nov 23 18:21 runpilot2-wrapper.sh
[2025-12-09 22:50:42] -rw-r--r-- 1 root root       100 Dec  9 09:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-09 22:50:42] -rwxr-xr-x 1 root root      7986 Dec  9 09:11 run_atlas
[2025-12-09 22:50:42] -rw-r--r-- 1 root root       105 Dec  9 09:11 job.xml
[2025-12-09 22:50:42] -rw-r--r-- 2 root root 409137934 Dec  9 09:11 EVNT.47483658._000978.pool.root.1
[2025-12-09 22:50:42] drwxrwx--x 2 root root      4096 Dec  9 09:11 shared
[2025-12-09 22:50:42] -rw-r--r-- 2 root root    590107 Dec  9 09:11 input.tar.gz
[2025-12-09 22:50:42] -rw-r--r-- 2 root root     15847 Dec  9 09:11 start_atlas.sh
[2025-12-09 22:50:42] -rw-r--r-- 1 root root         0 Dec  9 09:11 boinc_setup_complete
[2025-12-09 22:50:42] -rw-r--r-- 1 root root         0 Dec  9 09:11 boinc_lockfile
[2025-12-09 22:50:42] -rw-r--r-- 1 root root      2786 Dec  9 09:11 pandaJob.out
[2025-12-09 22:50:42] -rw------- 1 root root    979025 Dec  9 09:11 agis_schedconf.cvmfs.json
[2025-12-09 22:50:42] drwxr-xr-x 5  320  320      4096 Dec  9 09:11 pilot3
[2025-12-09 22:50:42] -rw-r--r-- 1 root root      9246 Dec  9 14:11 init_data.xml
[2025-12-09 22:50:42] -rw-r--r-- 1 root root       532 Dec  9 22:39 boinc_task_state.xml
[2025-12-09 22:50:42] -rw------- 1 root root 912769899 Dec  9 22:49 HITS.47556137._009643.pool.root.1
[2025-12-09 22:50:42] -rw------- 1 root root        95 Dec  9 22:49 pilot_heartbeat.json
[2025-12-09 22:50:42] -rw------- 1 root root      1034 Dec  9 22:49 memory_monitor_summary.json
[2025-12-09 22:50:42] -rw------- 1 root root   1516240 Dec  9 22:49 agis_ddmendpoints.agis.ALL.json
[2025-12-09 22:50:42] -rw------- 1 root root   2255293 Dec  9 22:49 log.47556137._009643.job.log.tgz.1
[2025-12-09 22:50:42] -rw------- 1 root root      8567 Dec  9 22:50 heartbeat.json
[2025-12-09 22:50:42] -rw-r--r-- 1 root root      8192 Dec  9 22:50 boinc_mmap_file
[2025-12-09 22:50:42] -rw-r--r-- 1 root root        29 Dec  9 22:50 wrapper_checkpoint.txt
[2025-12-09 22:50:42] -rw------- 1 root root       821 Dec  9 22:50 pilotlog.txt
[2025-12-09 22:50:42] -rw------- 1 root root   6881602 Dec  9 22:50 log.47556137._009643.job.log.1
[2025-12-09 22:50:42] -rw------- 1 root root       353 Dec  9 22:50 output.list
[2025-12-09 22:50:42] -rw-r--r-- 1 root root       620 Dec  9 22:50 runtime_log
[2025-12-09 22:50:42] -rw------- 1 root root   9154560 Dec  9 22:50 result.tar.gz
[2025-12-09 22:50:42] -rw------- 1 root root       656 Dec  9 22:50 YUOLDmsNbh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmhLLKDmd0R3en.diag
[2025-12-09 22:50:42] -rw-r--r-- 1 root root      9021 Dec  9 22:50 runtime_log.err
[2025-12-09 22:50:42] -rw-r--r-- 1 root root     21461 Dec  9 22:50 stderr.txt
[2025-12-09 22:50:42] HITS file was successfully produced:
[2025-12-09 22:50:42] -rw------- 1 root root 912769899 Dec  9 22:49 shared/HITS.pool.root.1
[2025-12-09 22:50:42]  *** Contents of shared directory: ***
[2025-12-09 22:50:42] total 1300476
[2025-12-09 22:50:42] -rw-r--r-- 2 root root 409137934 Dec  9 09:11 ATLAS.root_0
[2025-12-09 22:50:42] -rw-r--r-- 2 root root    590107 Dec  9 09:11 input.tar.gz
[2025-12-09 22:50:42] -rw-r--r-- 2 root root     15847 Dec  9 09:11 start_atlas.sh
[2025-12-09 22:50:42] -rw------- 1 root root 912769899 Dec  9 22:49 HITS.pool.root.1
[2025-12-09 22:50:42] -rw------- 1 root root   9154560 Dec  9 22:50 result.tar.gz
22:50:43 (99876): run_atlas exited; CPU time 203660.573833
22:50:43 (99876): called boinc_finish(0)

</stderr_txt>
]]>

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