Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
17:24:00 (3438110): wrapper (7.7.26015): starting
17:24:00 (3438110): wrapper: running run_atlas (--nthreads 10)
[2025-12-08 17:24:00] Arguments: --nthreads 10
[2025-12-08 17:24:00] Threads: 10
[2025-12-08 17:24:00] Checking for CVMFS
[2025-12-08 17:24:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-08 17:24:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-08 17:24:01] Running cvmfs_config stat atlas.cern.ch
[2025-12-08 17:24:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-08 17:24:02] 2.13.3.0 8606 10543 65672 153788 2 79 3741443 4096000 10879 130560 0 34323335 99.975 1056431 678 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-12-08 17:24:02] CVMFS is ok
[2025-12-08 17:24:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-08 17:24:02] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-08 17:24:02] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-08 17:24:02] Further information can be found at the LHC@home message board.
[2025-12-08 17:24:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-08 17:24:02] Checking for apptainer binary...
[2025-12-08 17:24:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-08 17:24:02] Running /usr/bin/apptainer --version
[2025-12-08 17:24:02] apptainer version 1.4.2
[2025-12-08 17:24:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-08 17:24:02] 3950x-linux
[2025-12-08 17:24:02] apptainer works
[2025-12-08 17:24:02] Set ATHENA_PROC_NUMBER=10
[2025-12-08 17:24:02] Set ATHENA_CORE_NUMBER=10
[2025-12-08 17:24:02] Starting ATLAS job with PandaID=6895376894
[2025-12-08 17:24:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc242/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-09 09:11:21]  *** The last 200 lines of the pilot log: ***
[2025-12-09 09:11:21] 2025-12-09 17:10:30,719 | INFO     | monitor loop #3832: job 0:6895376894 is in state 'finished'
[2025-12-09 09:11:21] 2025-12-09 17:10:30,719 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-09 09:11:21] 2025-12-09 17:10:30,867 | INFO     | time since job start (56750s) is within the limit (172800.0s)
[2025-12-09 09:11:21] 2025-12-09 17:10:31,522 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-09 09:11:21] 2025-12-09 17:10:31,530 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3400.125187500001
[2025-12-09 09:11:21] 2025-12-09 17:10:31,538 | INFO     | using path: /var/lib/multiboinc/boinc242/slots/2/PanDA_Pilot-6895376894/memory_monitor_summary.json (trf name=prmon)
[2025-12-09 09:11:21] 2025-12-09 17:10:31,542 | INFO     | extracted standard info from prmon json
[2025-12-09 09:11:21] 2025-12-09 17:10:31,542 | INFO     | extracted standard memory fields from prmon json
[2025-12-09 09:11:21] 2025-12-09 17:10:31,542 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-09 09:11:21] 2025-12-09 17:10:31,573 | INFO     | fitting pss+swap vs Time
[2025-12-09 09:11:21] 2025-12-09 17:10:31,574 | INFO     | sum of square deviations: 248593102345.00928
[2025-12-09 09:11:21] 2025-12-09 17:10:31,627 | INFO     | sum of deviations: 2115594725360.172
[2025-12-09 09:11:21] 2025-12-09 17:10:31,627 | INFO     | mean x: 1765271869.9537137
[2025-12-09 09:11:21] 2025-12-09 17:10:31,627 | INFO     | mean y: 3100733.515608181
[2025-12-09 09:11:21] 2025-12-09 17:10:31,628 | INFO     | intersect: -15019841663.806864
[2025-12-09 09:11:21] 2025-12-09 17:10:31,628 | INFO     | chi2: 9.357811411677723
[2025-12-09 09:11:21] 2025-12-09 17:10:31,633 | INFO     | sum of square deviations: 244601287616.15076
[2025-12-09 09:11:21] 2025-12-09 17:10:31,671 | INFO     | sum of deviations: 2471776459085.259
[2025-12-09 09:11:21] 2025-12-09 17:10:31,671 | INFO     | mean x: 1765271717.469697
[2025-12-09 09:11:21] 2025-12-09 17:10:31,671 | INFO     | mean y: 3114338.8127705627
[2025-12-09 09:11:21] 2025-12-09 17:10:31,671 | INFO     | intersect: -17835536952.25465
[2025-12-09 09:11:21] 2025-12-09 17:10:31,672 | INFO     | chi2: 5.858658371268724
[2025-12-09 09:11:21] 2025-12-09 17:10:31,672 | INFO     | current chi2=5.858658371268724 (change=37.392857009731614 %)
[2025-12-09 09:11:21] 2025-12-09 17:10:31,673 | INFO     | sum of square deviations: 240652281725.72318
[2025-12-09 09:11:21] 2025-12-09 17:10:31,708 | INFO     | sum of deviations: 2616286823519.6973
[2025-12-09 09:11:21] 2025-12-09 17:10:31,708 | INFO     | mean x: 1765271564.9825897
[2025-12-09 09:11:21] 2025-12-09 17:10:31,708 | INFO     | mean y: 3119901.7312295972
[2025-12-09 09:11:21] 2025-12-09 17:10:31,708 | INFO     | intersect: -19188290635.824795
[2025-12-09 09:11:21] 2025-12-09 17:10:31,709 | INFO     | chi2: 4.587914028212552
[2025-12-09 09:11:21] 2025-12-09 17:10:31,709 | INFO     | current chi2=4.587914028212552 (change=21.690022911866524 %)
[2025-12-09 09:11:21] 2025-12-09 17:10:31,709 | INFO     | right removable region: 918
[2025-12-09 09:11:21] 2025-12-09 17:10:31,710 | INFO     | sum of square deviations: 244599613776.15063
[2025-12-09 09:11:21] 2025-12-09 17:10:31,746 | INFO     | sum of deviations: 1752872308764.2112
[2025-12-09 09:11:21] 2025-12-09 17:10:31,750 | INFO     | mean x: 1765272022.469697
[2025-12-09 09:11:21] 2025-12-09 17:10:31,750 | INFO     | mean y: 3114580.971861472
[2025-12-09 09:11:21] 2025-12-09 17:10:31,750 | INFO     | intersect: -12647340576.55395
[2025-12-09 09:11:21] 2025-12-09 17:10:31,751 | INFO     | chi2: 5.985455027119378
[2025-12-09 09:11:21] 2025-12-09 17:10:31,751 | INFO     | current chi2=5.985455027119378 (change=36.03787505644687 %)
[2025-12-09 09:11:21] 2025-12-09 17:10:31,752 | INFO     | sum of square deviations: 240649327244.68582
[2025-12-09 09:11:21] 2025-12-09 17:10:31,786 | INFO     | sum of deviations: 1549127602715.586
[2025-12-09 09:11:21] 2025-12-09 17:10:31,787 | INFO     | mean x: 1765272174.9815016
[2025-12-09 09:11:21] 2025-12-09 17:10:31,787 | INFO     | mean y: 3122440.3873775844
[2025-12-09 09:11:21] 2025-12-09 17:10:31,787 | INFO     | intersect: -11360432504.393835
[2025-12-09 09:11:21] 2025-12-09 17:10:31,788 | INFO     | chi2: 4.978510117725663
[2025-12-09 09:11:21] 2025-12-09 17:10:31,788 | INFO     | current chi2=4.978510117725663 (change=16.82319731467981 %)
[2025-12-09 09:11:21] 2025-12-09 17:10:31,788 | INFO     | left removable region: 20
[2025-12-09 09:11:21] 2025-12-09 17:10:31,789 | INFO     | sum of square deviations: 224526537302.44528
[2025-12-09 09:11:21] 2025-12-09 17:10:31,822 | INFO     | sum of deviations: 1920518113069.6458
[2025-12-09 09:11:21] 2025-12-09 17:10:31,822 | INFO     | mean x: 1765272144.507795
[2025-12-09 09:11:21] 2025-12-09 17:10:31,822 | INFO     | mean y: 3147229.978841871
[2025-12-09 09:11:21] 2025-12-09 17:10:31,822 | INFO     | intersect: -15096346882.192616
[2025-12-09 09:11:21] 2025-12-09 17:10:31,826 | INFO     | chi2: 0.07119992743448943
[2025-12-09 09:11:21] 2025-12-09 17:10:31,826 | INFO     | current memory leak: 8.55 B/s (using 898 data points, chi2=0.07)
[2025-12-09 09:11:21] 2025-12-09 17:10:31,827 | INFO     | could have reported an average CPU frequency of 3400 MHz (35 samples)
[2025-12-09 09:11:21] 2025-12-09 17:10:31,827 | INFO     | ..............................
[2025-12-09 09:11:21] 2025-12-09 17:10:31,827 | INFO     | . Timing measurements:
[2025-12-09 09:11:21] 2025-12-09 17:10:31,827 | INFO     | . get job = 0 s
[2025-12-09 09:11:21] 2025-12-09 17:10:31,827 | INFO     | . initial setup = 5 s
[2025-12-09 09:11:21] 2025-12-09 17:10:31,827 | INFO     | . payload setup = 23 s
[2025-12-09 09:11:21] 2025-12-09 17:10:31,827 | INFO     | . stage-in = 0 s
[2025-12-09 09:11:21] 2025-12-09 17:10:31,828 | INFO     | . payload execution = 56662 s
[2025-12-09 09:11:21] 2025-12-09 17:10:31,828 | INFO     | . stage-out = 6 s
[2025-12-09 09:11:21] 2025-12-09 17:10:31,828 | INFO     | . log creation = 1 s
[2025-12-09 09:11:21] 2025-12-09 17:10:31,828 | INFO     | ..............................
[2025-12-09 09:11:21] 2025-12-09 17:10:32,345 | INFO     | 
[2025-12-09 09:11:21] 2025-12-09 17:10:32,346 | INFO     | job summary report
[2025-12-09 09:11:21] 2025-12-09 17:10:32,346 | INFO     | --------------------------------------------------
[2025-12-09 09:11:21] 2025-12-09 17:10:32,346 | INFO     | PanDA job id: 6895376894
[2025-12-09 09:11:21] 2025-12-09 17:10:32,346 | INFO     | task id: 47556137
[2025-12-09 09:11:21] 2025-12-09 17:10:32,346 | INFO     | errors: (none)
[2025-12-09 09:11:21] 2025-12-09 17:10:32,346 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-09 09:11:21] 2025-12-09 17:10:32,346 | INFO     | pilot state: finished 
[2025-12-09 09:11:21] 2025-12-09 17:10:32,346 | INFO     | transexitcode: 0
[2025-12-09 09:11:21] 2025-12-09 17:10:32,346 | INFO     | exeerrorcode: 0
[2025-12-09 09:11:21] 2025-12-09 17:10:32,346 | INFO     | exeerrordiag: 
[2025-12-09 09:11:21] 2025-12-09 17:10:32,346 | INFO     | exitcode: 0
[2025-12-09 09:11:21] 2025-12-09 17:10:32,346 | INFO     | exitmsg: OK
[2025-12-09 09:11:21] 2025-12-09 17:10:32,346 | INFO     | cpuconsumptiontime: 201781 s
[2025-12-09 09:11:21] 2025-12-09 17:10:32,347 | INFO     | nevents: 1000
[2025-12-09 09:11:21] 2025-12-09 17:10:32,347 | INFO     | neventsw: 0
[2025-12-09 09:11:21] 2025-12-09 17:10:32,347 | INFO     | pid: 3452940
[2025-12-09 09:11:21] 2025-12-09 17:10:32,347 | INFO     | pgrp: 3452940
[2025-12-09 09:11:21] 2025-12-09 17:10:32,347 | INFO     | corecount: 10
[2025-12-09 09:11:21] 2025-12-09 17:10:32,347 | INFO     | event service: False
[2025-12-09 09:11:21] 2025-12-09 17:10:32,347 | INFO     | sizes: {0: 2284152, 1: 2284351, 2: 2284351, 13: 2284379, 18: 2284697, 23: 2284725, 56690: 2337360, 56697: 2346382, 56699: 2346438, 56710: 2346684}
[2025-12-09 09:11:21] 2025-12-09 17:10:32,347 | INFO     | --------------------------------------------------
[2025-12-09 09:11:21] 2025-12-09 17:10:32,347 | INFO     | 
[2025-12-09 09:11:21] 2025-12-09 17:10:32,347 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc242/slots/2
[2025-12-09 09:11:21] 2025-12-09 17:10:32,403 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-09 09:11:21] 2025-12-09 17:10:32,403 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-09 09:11:21] 2025-12-09 17:10:32,403 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-09 09:11:21] 2025-12-09 17:10:32,403 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-09 09:11:21] 2025-12-09 17:10:32,403 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-09 09:11:21] 2025-12-09 17:10:32,403 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-09 09:11:21] 2025-12-09 17:10:32,403 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-09 09:11:21] 2025-12-09 17:10:32,403 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-09 09:11:21] 2025-12-09 17:10:32,403 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-09 09:11:21] 2025-12-09 17:10:32,403 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-09 09:11:21] 2025-12-09 17:10:32,404 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-09 09:11:21] 2025-12-09 17:10:32,404 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-09 09:11:21] 2025-12-09 17:10:32,404 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-09 09:11:21] 2025-12-09 17:10:32,404 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-09 09:11:21] 2025-12-09 17:10:32,404 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-09 09:11:21] 2025-12-09 17:10:32,404 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-09 09:11:21] 2025-12-09 17:10:32,404 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-09 09:11:21] 2025-12-09 17:10:32,404 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-09 09:11:21] 2025-12-09 17:10:32,404 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-09 09:11:21] 2025-12-09 17:10:32,404 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-09 09:11:21] 2025-12-09 17:10:32,404 | INFO     | job 6895376894 has completed (purged errors)
[2025-12-09 09:11:21] 2025-12-09 17:10:32,404 | INFO     | overall cleanup function is called
[2025-12-09 09:11:21] 2025-12-09 17:10:33,439 | INFO     | --- collectZombieJob: --- 10, [3452940]
[2025-12-09 09:11:21] 2025-12-09 17:10:33,440 | INFO     | zombie collector waiting for pid 3452940
[2025-12-09 09:11:21] 2025-12-09 17:10:33,440 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-09 09:11:21] 2025-12-09 17:10:33,440 | INFO     | collected zombie processes
[2025-12-09 09:11:21] 2025-12-09 17:10:33,440 | INFO     | will attempt to kill all subprocesses of pid=3452940
[2025-12-09 09:11:21] 2025-12-09 17:10:33,811 | INFO     | process IDs to be killed: [3452940] (in reverse order)
[2025-12-09 09:11:21] 2025-12-09 17:10:33,968 | WARNING  | found no corresponding commands to process id(s)
[2025-12-09 09:11:21] 2025-12-09 17:10:33,969 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-09 09:11:21] 2025-12-09 17:10:33,987 | INFO     | did not find any defunct processes belonging to 3452940
[2025-12-09 09:11:21] 2025-12-09 17:10:34,001 | INFO     | did not find any defunct processes belonging to 3452940
[2025-12-09 09:11:21] 2025-12-09 17:10:34,003 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-09 09:11:21] 2025-12-09 17:10:34,003 | INFO     | ready for new job
[2025-12-09 09:11:21] 2025-12-09 17:10:34,003 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-09 09:11:21] 2025-12-09 17:10:34,015 | INFO     | ***************************************
[2025-12-09 09:11:21] 2025-12-09 17:10:34,016 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-09 09:11:21] 2025-12-09 17:10:34,016 | INFO     | ***************************************
[2025-12-09 09:11:21] 2025-12-09 17:10:34,016 | INFO     | 
[2025-12-09 09:11:21] 2025-12-09 17:10:34,019 | INFO     | architecture information:
[2025-12-09 09:11:21] 2025-12-09 17:10:34,021 | INFO     | executing command: cat /etc/os-release
[2025-12-09 09:11:21] 2025-12-09 17:10:34,068 | INFO     | cat /etc/os-release:
[2025-12-09 09:11:21] NAME="CentOS Linux"
[2025-12-09 09:11:21] VERSION="7 (Core)"
[2025-12-09 09:11:21] ID="centos"
[2025-12-09 09:11:21] ID_LIKE="rhel fedora"
[2025-12-09 09:11:21] VERSION_ID="7"
[2025-12-09 09:11:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-09 09:11:21] ANSI_COLOR="0;31"
[2025-12-09 09:11:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-09 09:11:21] HOME_URL="https://www.centos.org/"
[2025-12-09 09:11:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-09 09:11:21] 
[2025-12-09 09:11:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-09 09:11:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-09 09:11:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-09 09:11:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-09 09:11:21] 
[2025-12-09 09:11:21] 2025-12-09 17:10:34,068 | INFO     | ***************************************
[2025-12-09 09:11:21] 2025-12-09 17:10:34,572 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc242/slots/2
[2025-12-09 09:11:21] 2025-12-09 17:10:34,618 | INFO     | sufficient remaining disk space (79858499584 B)
[2025-12-09 09:11:21] 2025-12-09 17:10:34,618 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-09 09:11:21] 2025-12-09 17:10:34,618 | INFO     | current server update state: UPDATING_FINAL
[2025-12-09 09:11:21] 2025-12-09 17:10:34,618 | INFO     | update_server=False
[2025-12-09 09:11:21] 2025-12-09 17:10:34,618 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-09 09:11:21] 2025-12-09 17:10:34,618 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-09 09:11:21] 2025-12-09 17:10:34,619 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-09 09:11:21] 2025-12-09 17:10:34,619 | INFO     | aborting loop
[2025-12-09 09:11:21] 2025-12-09 17:10:34,723 | INFO     | all job control threads have been joined
[2025-12-09 09:11:21] 2025-12-09 17:10:34,724 | INFO     | all data control threads have been joined
[2025-12-09 09:11:21] 2025-12-09 17:10:35,619 | INFO     | all payload control threads have been joined
[2025-12-09 09:11:21] 2025-12-09 17:10:35,623 | INFO     | [job] retrieve thread has finished
[2025-12-09 09:11:21] 2025-12-09 17:10:35,624 | INFO     | [job] job monitor thread has finished
[2025-12-09 09:11:21] 2025-12-09 17:10:35,710 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-09 09:11:21] 2025-12-09 17:10:35,729 | INFO     | [data] control thread has finished
[2025-12-09 09:11:21] 2025-12-09 17:10:35,729 | INFO     | [job] control thread has finished
[2025-12-09 09:11:21] 2025-12-09 17:10:35,876 | INFO     | [data] copytool_in thread has finished
[2025-12-09 09:11:21] 2025-12-09 17:10:35,917 | INFO     | [job] create_data_payload thread has finished
[2025-12-09 09:11:21] 2025-12-09 17:10:35,917 | INFO     | [job] validate thread has finished
[2025-12-09 09:11:21] 2025-12-09 17:10:36,233 | INFO     | [payload] failed_post thread has finished
[2025-12-09 09:11:21] 2025-12-09 17:10:36,517 | INFO     | [payload] execute_payloads thread has finished
[2025-12-09 09:11:21] 2025-12-09 17:10:36,624 | INFO     | [data] copytool_out thread has finished
[2025-12-09 09:11:21] 2025-12-09 17:10:36,624 | INFO     | [payload] control thread has finished
[2025-12-09 09:11:21] 2025-12-09 17:10:36,756 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-09 09:11:21] 2025-12-09 17:10:36,847 | INFO     | [payload] validate_post thread has finished
[2025-12-09 09:11:21] 2025-12-09 17:10:36,995 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-09 09:11:21] 2025-12-09 17:10:37,003 | INFO     | [payload] validate_pre thread has finished
[2025-12-09 09:11:21] 2025-12-09 17:10:38,002 | INFO     | [job] queue monitor thread has finished
[2025-12-09 09:11:21] 2025-12-09 17:10:39,716 | INFO     | [data] queue_monitor thread has finished
[2025-12-09 09:11:21] 2025-12-09 17:11:04,381 | INFO     | PID=3444080 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-09 09:11:21] 2025-12-09 17:11:04,381 | INFO     | .. there are 7 such processes running
[2025-12-09 09:11:21] 2025-12-09 17:11:04,382 | INFO     | found 0 job(s) in 20 queues
[2025-12-09 09:11:21] 2025-12-09 17:11:04,382 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-09 09:11:21] 2025-12-09 17:11:04,382 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-09 09:11:21] 2025-12-09 17:11:14,861 | INFO     | [monitor] cgroup control has ended
[2025-12-09 09:11:21] 2025-12-09 17:11:15,795 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130458951849792)>', '<ExcThread(monitor, started 130458608195328)>']
[2025-12-09 09:11:21] 2025-12-09 17:11:16,448 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-09 09:11:21] 2025-12-09 17:11:16,449 | INFO     | [monitor] control thread has ended
[2025-12-09 09:11:21] 2025-12-09 17:11:20,819 | INFO     | all workflow threads have been joined
[2025-12-09 09:11:21] 2025-12-09 17:11:20,820 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-09 09:11:21] 2025-12-09 17:11:20,820 | INFO     | traces error code: 0
[2025-12-09 09:11:21] 2025-12-09 17:11:20,820 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-09 09:11:21] 2025-12-09 17:11:21,082 [wrapper] ==== pilot stdout END ====
[2025-12-09 09:11:21] 2025-12-09 17:11:21,091 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-09 09:11:21] 2025-12-09 17:11:21,106 [wrapper] pilotpid: 3444080
[2025-12-09 09:11:21] 2025-12-09 17:11:21,115 [wrapper] Pilot exit status: 0
[2025-12-09 09:11:21] 2025-12-09 17:11:21,155 [wrapper] pandaids: 6895376894
[2025-12-09 09:11:21] 2025-12-09 17:11:21,289 [wrapper] cleanup supervisor_pilot   97578 3444081
[2025-12-09 09:11:21] 2025-12-09 17:11:21,297 [wrapper] Test setup, not cleaning
[2025-12-09 09:11:21] 2025-12-09 17:11:21,305 [wrapper] apfmon messages muted
[2025-12-09 09:11:21] 2025-12-09 17:11:21,320 [wrapper] ==== wrapper stdout END ====
[2025-12-09 09:11:21] 2025-12-09 17:11:21,327 [wrapper] ==== wrapper stderr END ====
[2025-12-09 09:11:21]  *** Error codes and diagnostics ***
[2025-12-09 09:11:21]     "exeErrorCode": 0,
[2025-12-09 09:11:21]     "exeErrorDiag": "",
[2025-12-09 09:11:21]     "pilotErrorCode": 0,
[2025-12-09 09:11:21]     "pilotErrorDiag": "",
[2025-12-09 09:11:21]  *** Listing of results directory ***
[2025-12-09 09:11:21] total 1306076
[2025-12-09 09:11:21] -rw-r--r-- 1 root root    576529 Nov 23 16:34 pilot3.tar.gz
[2025-12-09 09:11:21] -rwx------ 1 4871 1028     36292 Nov 23 16:39 runpilot2-wrapper.sh
[2025-12-09 09:11:21] -rw-r--r-- 1 root root      5112 Nov 23 16:39 queuedata.json
[2025-12-09 09:11:21] -rw-r--r-- 1 root root       100 Dec  8 17:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-09 09:11:21] -rwxr-xr-x 1 root root      7986 Dec  8 17:23 run_atlas
[2025-12-09 09:11:21] -rw-r--r-- 1 root root       105 Dec  8 17:23 job.xml
[2025-12-09 09:11:21] -rw-r--r-- 2 root root 409774481 Dec  8 17:24 EVNT.47483658._000967.pool.root.1
[2025-12-09 09:11:21] drwxrwx--x 2 root root      4096 Dec  8 17:24 shared
[2025-12-09 09:11:21] -rw-r--r-- 2 root root    590091 Dec  8 17:24 input.tar.gz
[2025-12-09 09:11:21] -rw-r--r-- 2 root root     15847 Dec  8 17:24 start_atlas.sh
[2025-12-09 09:11:21] -rw-r--r-- 1 root root         0 Dec  8 17:24 boinc_setup_complete
[2025-12-09 09:11:21] -rw-r--r-- 1 root root      9229 Dec  8 17:24 init_data.xml
[2025-12-09 09:11:21] -rw-r--r-- 1 root root         0 Dec  8 17:24 boinc_lockfile
[2025-12-09 09:11:21] -rw-r--r-- 1 root root      2783 Dec  8 17:24 pandaJob.out
[2025-12-09 09:11:21] -rw------- 1 root root    981530 Dec  8 17:24 agis_schedconf.cvmfs.json
[2025-12-09 09:11:21] drwxr-xr-x 5  320  320      4096 Dec  8 17:24 pilot3
[2025-12-09 09:11:21] -rw-r--r-- 1 root root       533 Dec  9 08:58 boinc_task_state.xml
[2025-12-09 09:11:21] -rw------- 1 root root 903297350 Dec  9 09:09 HITS.47556137._009531.pool.root.1
[2025-12-09 09:11:21] -rw------- 1 root root      1037 Dec  9 09:10 memory_monitor_summary.json
[2025-12-09 09:11:21] -rw------- 1 root root   1516240 Dec  9 09:10 agis_ddmendpoints.agis.ALL.json
[2025-12-09 09:11:21] -rw------- 1 root root   2347908 Dec  9 09:10 log.47556137._009531.job.log.tgz.1
[2025-12-09 09:11:21] -rw------- 1 root root      8566 Dec  9 09:10 heartbeat.json
[2025-12-09 09:11:21] -rw------- 1 root root        95 Dec  9 09:11 pilot_heartbeat.json
[2025-12-09 09:11:21] -rw-r--r-- 1 root root      8192 Dec  9 09:11 boinc_mmap_file
[2025-12-09 09:11:21] -rw-r--r-- 1 root root        29 Dec  9 09:11 wrapper_checkpoint.txt
[2025-12-09 09:11:21] -rw------- 1 root root      4837 Dec  9 09:11 pilotlog.txt
[2025-12-09 09:11:21] -rw------- 1 root root   7872329 Dec  9 09:11 log.47556137._009531.job.log.1
[2025-12-09 09:11:21] -rw------- 1 root root       353 Dec  9 09:11 output.list
[2025-12-09 09:11:21] -rw-r--r-- 1 root root       620 Dec  9 09:11 runtime_log
[2025-12-09 09:11:21] -rw------- 1 root root  10240000 Dec  9 09:11 result.tar.gz
[2025-12-09 09:11:21] -rw-r--r-- 1 root root      9021 Dec  9 09:11 runtime_log.err
[2025-12-09 09:11:21] -rw------- 1 root root       656 Dec  9 09:11 qXGKDmsmZh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmoJLKDmlO1Tkn.diag
[2025-12-09 09:11:21] -rw-r--r-- 1 root root     21479 Dec  9 09:11 stderr.txt
[2025-12-09 09:11:21] HITS file was successfully produced:
[2025-12-09 09:11:21] -rw------- 1 root root 903297350 Dec  9 09:09 shared/HITS.pool.root.1
[2025-12-09 09:11:21]  *** Contents of shared directory: ***
[2025-12-09 09:11:21] total 1292904
[2025-12-09 09:11:21] -rw-r--r-- 2 root root 409774481 Dec  8 17:24 ATLAS.root_0
[2025-12-09 09:11:21] -rw-r--r-- 2 root root    590091 Dec  8 17:24 input.tar.gz
[2025-12-09 09:11:21] -rw-r--r-- 2 root root     15847 Dec  8 17:24 start_atlas.sh
[2025-12-09 09:11:21] -rw------- 1 root root 903297350 Dec  9 09:09 HITS.pool.root.1
[2025-12-09 09:11:21] -rw------- 1 root root  10240000 Dec  9 09:11 result.tar.gz
09:11:22 (3438110): run_atlas exited; CPU time 201660.747689
09:11:22 (3438110): called boinc_finish(0)

</stderr_txt>
]]>

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