Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
22:51:12 (2188558): wrapper (7.7.26015): starting
22:51:12 (2188558): wrapper: running run_atlas (--nthreads 10)
[2025-12-07 22:51:12] Arguments: --nthreads 10
[2025-12-07 22:51:12] Threads: 10
[2025-12-07 22:51:12] Checking for CVMFS
[2025-12-07 22:51:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-07 22:51:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-07 22:51:13] Running cvmfs_config stat atlas.cern.ch
[2025-12-07 22:51:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-07 22:51:14] 2.13.3.0 8606 9431 63500 153756 0 101 3559583 4096001 10845 130560 0 30707818 99.972 1009687 675 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-12-07 22:51:14] CVMFS is ok
[2025-12-07 22:51:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-07 22:51:14] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-07 22:51:14] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-07 22:51:14] Further information can be found at the LHC@home message board.
[2025-12-07 22:51:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-07 22:51:14] Checking for apptainer binary...
[2025-12-07 22:51:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-07 22:51:14] Running /usr/bin/apptainer --version
[2025-12-07 22:51:14] apptainer version 1.4.2
[2025-12-07 22:51:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-07 22:51:14] 3950x-linux
[2025-12-07 22:51:14] apptainer works
[2025-12-07 22:51:14] Set ATHENA_PROC_NUMBER=10
[2025-12-07 22:51:14] Set ATHENA_CORE_NUMBER=10
[2025-12-07 22:51:15] Starting ATLAS job with PandaID=6905456816
[2025-12-07 22:51:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc242/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-08 17:23:53]  *** The last 200 lines of the pilot log: ***
[2025-12-08 17:23:53] 2025-12-09 01:22:57,290 | INFO     | monitor loop #4365: job 0:6905456816 is in state 'finished'
[2025-12-08 17:23:53] 2025-12-09 01:22:57,291 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-08 17:23:53] 2025-12-09 01:22:58,643 | INFO     | time since job start (66664s) is within the limit (172800.0s)
[2025-12-08 17:23:53] 2025-12-09 01:22:59,795 | INFO     | monitor loop #4366: job 0:6905456816 is in state 'finished'
[2025-12-08 17:23:53] 2025-12-09 01:22:59,796 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-08 17:23:53] 2025-12-09 01:23:00,653 | INFO     | time since job start (66666s) is within the limit (172800.0s)
[2025-12-08 17:23:53] 2025-12-09 01:23:02,301 | INFO     | monitor loop #4367: job 0:6905456816 is in state 'finished'
[2025-12-08 17:23:53] 2025-12-09 01:23:02,302 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-08 17:23:53] 2025-12-09 01:23:02,658 | INFO     | time since job start (66668s) is within the limit (172800.0s)
[2025-12-08 17:23:53] 2025-12-09 01:23:04,663 | INFO     | time since job start (66670s) is within the limit (172800.0s)
[2025-12-08 17:23:53] 2025-12-09 01:23:04,663 | INFO     | 66675s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-08 17:23:53] 2025-12-09 01:23:04,804 | INFO     | monitor loop #4368: job 0:6905456816 is in state 'finished'
[2025-12-08 17:23:53] 2025-12-09 01:23:04,805 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-08 17:23:53] 2025-12-09 01:23:05,587 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-08 17:23:53] 2025-12-09 01:23:05,602 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3400.1245312499996
[2025-12-08 17:23:53] 2025-12-09 01:23:05,629 | INFO     | using path: /var/lib/multiboinc/boinc242/slots/2/PanDA_Pilot-6905456816/memory_monitor_summary.json (trf name=prmon)
[2025-12-08 17:23:53] 2025-12-09 01:23:05,630 | INFO     | extracted standard info from prmon json
[2025-12-08 17:23:53] 2025-12-09 01:23:05,630 | INFO     | extracted standard memory fields from prmon json
[2025-12-08 17:23:53] 2025-12-09 01:23:05,630 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-08 17:23:53] 2025-12-09 01:23:05,714 | INFO     | fitting pss+swap vs Time
[2025-12-08 17:23:53] 2025-12-09 01:23:05,723 | INFO     | sum of square deviations: 402674586336.1576
[2025-12-08 17:23:53] 2025-12-09 01:23:05,818 | INFO     | sum of deviations: 2366743710152.896
[2025-12-08 17:23:53] 2025-12-09 01:23:05,818 | INFO     | mean x: 1765210054.4014666
[2025-12-08 17:23:53] 2025-12-09 01:23:05,818 | INFO     | mean y: 3709629.938588451
[2025-12-08 17:23:53] 2025-12-09 01:23:05,818 | INFO     | intersect: -10371416924.151033
[2025-12-08 17:23:53] 2025-12-09 01:23:05,819 | INFO     | chi2: 15.50596779875423
[2025-12-08 17:23:53] 2025-12-09 01:23:05,820 | INFO     | sum of square deviations: 397164758990.54156
[2025-12-08 17:23:53] 2025-12-09 01:23:05,888 | INFO     | sum of deviations: 2836799401348.258
[2025-12-08 17:23:53] 2025-12-09 01:23:05,889 | INFO     | mean x: 1765209901.9171271
[2025-12-08 17:23:53] 2025-12-09 01:23:05,889 | INFO     | mean y: 3722638.813996317
[2025-12-08 17:23:53] 2025-12-09 01:23:05,889 | INFO     | intersect: -12604511802.076508
[2025-12-08 17:23:53] 2025-12-09 01:23:05,896 | INFO     | chi2: 12.339433086097307
[2025-12-08 17:23:53] 2025-12-09 01:23:05,900 | INFO     | current chi2=12.339433086097307 (change=20.421393580549854 %)
[2025-12-08 17:23:53] 2025-12-09 01:23:05,900 | INFO     | right removable region: 1085
[2025-12-08 17:23:53] 2025-12-09 01:23:05,901 | INFO     | sum of square deviations: 397162495280.54144
[2025-12-08 17:23:53] 2025-12-09 01:23:05,953 | INFO     | sum of deviations: 1821647512355.015
[2025-12-08 17:23:53] 2025-12-09 01:23:05,957 | INFO     | mean x: 1765210206.9171271
[2025-12-08 17:23:53] 2025-12-09 01:23:05,957 | INFO     | mean y: 3724709.966850829
[2025-12-08 17:23:53] 2025-12-09 01:23:05,957 | INFO     | intersect: -8092686256.3880825
[2025-12-08 17:23:53] 2025-12-09 01:23:05,958 | INFO     | chi2: 11.65626925317585
[2025-12-08 17:23:53] 2025-12-09 01:23:05,968 | INFO     | current chi2=11.65626925317585 (change=24.827205857396855 %)
[2025-12-08 17:23:53] 2025-12-09 01:23:05,968 | INFO     | left removable region: 10
[2025-12-08 17:23:53] 2025-12-09 01:23:05,969 | INFO     | sum of square deviations: 385216088224.28455
[2025-12-08 17:23:53] 2025-12-09 01:23:06,024 | INFO     | sum of deviations: 2009127044479.0852
[2025-12-08 17:23:53] 2025-12-09 01:23:06,024 | INFO     | mean x: 1765210176.4520931
[2025-12-08 17:23:53] 2025-12-09 01:23:06,025 | INFO     | mean y: 3751144.962790698
[2025-12-08 17:23:53] 2025-12-09 01:23:06,025 | INFO     | intersect: -9202851624.531872
[2025-12-08 17:23:53] 2025-12-09 01:23:06,044 | INFO     | chi2: 6.066380277975537
[2025-12-08 17:23:53] 2025-12-09 01:23:06,044 | INFO     | current memory leak: 5.22 B/s (using 1075 data points, chi2=6.07)
[2025-12-08 17:23:53] 2025-12-09 01:23:06,045 | INFO     | could have reported an average CPU frequency of 3400 MHz (40 samples)
[2025-12-08 17:23:53] 2025-12-09 01:23:06,045 | INFO     | ..............................
[2025-12-08 17:23:53] 2025-12-09 01:23:06,045 | INFO     | . Timing measurements:
[2025-12-08 17:23:53] 2025-12-09 01:23:06,045 | INFO     | . get job = 0 s
[2025-12-08 17:23:53] 2025-12-09 01:23:06,045 | INFO     | . initial setup = 4 s
[2025-12-08 17:23:53] 2025-12-09 01:23:06,045 | INFO     | . payload setup = 32 s
[2025-12-08 17:23:53] 2025-12-09 01:23:06,045 | INFO     | . stage-in = 0 s
[2025-12-08 17:23:53] 2025-12-09 01:23:06,045 | INFO     | . payload execution = 66559 s
[2025-12-08 17:23:53] 2025-12-09 01:23:06,045 | INFO     | . stage-out = 7 s
[2025-12-08 17:23:53] 2025-12-09 01:23:06,046 | INFO     | . log creation = 2 s
[2025-12-08 17:23:53] 2025-12-09 01:23:06,046 | INFO     | ..............................
[2025-12-08 17:23:53] 2025-12-09 01:23:06,365 | INFO     | 
[2025-12-08 17:23:53] 2025-12-09 01:23:06,365 | INFO     | job summary report
[2025-12-08 17:23:53] 2025-12-09 01:23:06,365 | INFO     | --------------------------------------------------
[2025-12-08 17:23:53] 2025-12-09 01:23:06,365 | INFO     | PanDA job id: 6905456816
[2025-12-08 17:23:53] 2025-12-09 01:23:06,365 | INFO     | task id: 47530725
[2025-12-08 17:23:53] 2025-12-09 01:23:06,365 | INFO     | errors: (none)
[2025-12-08 17:23:53] 2025-12-09 01:23:06,366 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-08 17:23:53] 2025-12-09 01:23:06,366 | INFO     | pilot state: finished 
[2025-12-08 17:23:53] 2025-12-09 01:23:06,366 | INFO     | transexitcode: 0
[2025-12-08 17:23:53] 2025-12-09 01:23:06,366 | INFO     | exeerrorcode: 0
[2025-12-08 17:23:53] 2025-12-09 01:23:06,366 | INFO     | exeerrordiag: 
[2025-12-08 17:23:53] 2025-12-09 01:23:06,366 | INFO     | exitcode: 0
[2025-12-08 17:23:53] 2025-12-09 01:23:06,366 | INFO     | exitmsg: OK
[2025-12-08 17:23:53] 2025-12-09 01:23:06,366 | INFO     | cpuconsumptiontime: 181611 s
[2025-12-08 17:23:53] 2025-12-09 01:23:06,366 | INFO     | nevents: 1000
[2025-12-08 17:23:53] 2025-12-09 01:23:06,366 | INFO     | neventsw: 0
[2025-12-08 17:23:53] 2025-12-09 01:23:06,366 | INFO     | pid: 2202025
[2025-12-08 17:23:53] 2025-12-09 01:23:06,366 | INFO     | pgrp: 2202025
[2025-12-08 17:23:53] 2025-12-09 01:23:06,366 | INFO     | corecount: 10
[2025-12-08 17:23:53] 2025-12-09 01:23:06,366 | INFO     | event service: False
[2025-12-08 17:23:53] 2025-12-09 01:23:06,366 | INFO     | sizes: {0: 2284245, 1: 2284444, 12: 2284444, 20: 2284734, 23: 2284762, 66596: 2360616, 66597: 2360743, 66605: 2369821, 66607: 2369877, 66631: 2370123}
[2025-12-08 17:23:53] 2025-12-09 01:23:06,366 | INFO     | --------------------------------------------------
[2025-12-08 17:23:53] 2025-12-09 01:23:06,366 | INFO     | 
[2025-12-08 17:23:53] 2025-12-09 01:23:06,367 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc242/slots/2
[2025-12-08 17:23:53] 2025-12-09 01:23:06,463 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-08 17:23:53] 2025-12-09 01:23:06,463 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-08 17:23:53] 2025-12-09 01:23:06,463 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-08 17:23:53] 2025-12-09 01:23:06,463 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-08 17:23:53] 2025-12-09 01:23:06,463 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-08 17:23:53] 2025-12-09 01:23:06,464 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-08 17:23:53] 2025-12-09 01:23:06,464 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-08 17:23:53] 2025-12-09 01:23:06,464 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-08 17:23:53] 2025-12-09 01:23:06,464 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-08 17:23:53] 2025-12-09 01:23:06,464 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-08 17:23:53] 2025-12-09 01:23:06,464 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-08 17:23:53] 2025-12-09 01:23:06,464 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-08 17:23:53] 2025-12-09 01:23:06,464 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-08 17:23:53] 2025-12-09 01:23:06,464 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-08 17:23:53] 2025-12-09 01:23:06,464 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-08 17:23:53] 2025-12-09 01:23:06,464 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-08 17:23:53] 2025-12-09 01:23:06,479 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-08 17:23:53] 2025-12-09 01:23:06,479 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-08 17:23:53] 2025-12-09 01:23:06,479 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-08 17:23:53] 2025-12-09 01:23:06,479 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-08 17:23:53] 2025-12-09 01:23:06,479 | INFO     | job 6905456816 has completed (purged errors)
[2025-12-08 17:23:53] 2025-12-09 01:23:06,479 | INFO     | overall cleanup function is called
[2025-12-08 17:23:53] 2025-12-09 01:23:06,918 | INFO     | PID=2192451 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-08 17:23:53] 2025-12-09 01:23:06,918 | INFO     | .. there are 12 such processes running
[2025-12-08 17:23:53] 2025-12-09 01:23:07,539 | INFO     | --- collectZombieJob: --- 10, [2202025]
[2025-12-08 17:23:53] 2025-12-09 01:23:07,539 | INFO     | zombie collector waiting for pid 2202025
[2025-12-08 17:23:53] 2025-12-09 01:23:07,539 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-08 17:23:53] 2025-12-09 01:23:07,539 | INFO     | collected zombie processes
[2025-12-08 17:23:53] 2025-12-09 01:23:07,539 | INFO     | will attempt to kill all subprocesses of pid=2202025
[2025-12-08 17:23:53] 2025-12-09 01:23:08,578 | INFO     | process IDs to be killed: [2202025] (in reverse order)
[2025-12-08 17:23:53] 2025-12-09 01:23:08,836 | WARNING  | found no corresponding commands to process id(s)
[2025-12-08 17:23:53] 2025-12-09 01:23:08,840 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-08 17:23:53] 2025-12-09 01:23:08,865 | INFO     | did not find any defunct processes belonging to 2202025
[2025-12-08 17:23:53] 2025-12-09 01:23:08,888 | INFO     | did not find any defunct processes belonging to 2202025
[2025-12-08 17:23:53] 2025-12-09 01:23:08,893 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-08 17:23:53] 2025-12-09 01:23:08,893 | INFO     | ready for new job
[2025-12-08 17:23:53] 2025-12-09 01:23:08,893 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-08 17:23:53] 2025-12-09 01:23:08,908 | INFO     | ***************************************
[2025-12-08 17:23:53] 2025-12-09 01:23:08,908 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-08 17:23:53] 2025-12-09 01:23:08,908 | INFO     | ***************************************
[2025-12-08 17:23:53] 2025-12-09 01:23:08,908 | INFO     | 
[2025-12-08 17:23:53] 2025-12-09 01:23:08,916 | INFO     | architecture information:
[2025-12-08 17:23:53] 2025-12-09 01:23:08,916 | INFO     | executing command: cat /etc/os-release
[2025-12-08 17:23:53] 2025-12-09 01:23:08,979 | INFO     | cat /etc/os-release:
[2025-12-08 17:23:53] NAME="CentOS Linux"
[2025-12-08 17:23:53] VERSION="7 (Core)"
[2025-12-08 17:23:53] ID="centos"
[2025-12-08 17:23:53] ID_LIKE="rhel fedora"
[2025-12-08 17:23:53] VERSION_ID="7"
[2025-12-08 17:23:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-08 17:23:53] ANSI_COLOR="0;31"
[2025-12-08 17:23:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-08 17:23:53] HOME_URL="https://www.centos.org/"
[2025-12-08 17:23:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-08 17:23:53] 
[2025-12-08 17:23:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-08 17:23:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-08 17:23:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-08 17:23:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-08 17:23:53] 
[2025-12-08 17:23:53] 2025-12-09 01:23:08,979 | INFO     | ***************************************
[2025-12-08 17:23:53] 2025-12-09 01:23:09,484 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc242/slots/2
[2025-12-08 17:23:53] 2025-12-09 01:23:09,530 | INFO     | sufficient remaining disk space (71101841408 B)
[2025-12-08 17:23:53] 2025-12-09 01:23:09,530 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-08 17:23:53] 2025-12-09 01:23:09,530 | INFO     | current server update state: UPDATING_FINAL
[2025-12-08 17:23:53] 2025-12-09 01:23:09,530 | INFO     | update_server=False
[2025-12-08 17:23:53] 2025-12-09 01:23:09,530 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-08 17:23:53] 2025-12-09 01:23:09,534 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-08 17:23:53] 2025-12-09 01:23:09,823 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-08 17:23:53] 2025-12-09 01:23:09,824 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-08 17:23:53] 2025-12-09 01:23:09,824 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-08 17:23:53] 2025-12-09 01:23:09,824 | INFO     | will abort loop
[2025-12-08 17:23:53] 2025-12-09 01:23:10,417 | INFO     | all data control threads have been joined
[2025-12-08 17:23:53] 2025-12-09 01:23:10,539 | INFO     | [job] retrieve thread has finished
[2025-12-08 17:23:53] 2025-12-09 01:23:10,582 | INFO     | [payload] execute_payloads thread has finished
[2025-12-08 17:23:53] 2025-12-09 01:23:10,617 | INFO     | [payload] validate_pre thread has finished
[2025-12-08 17:23:53] 2025-12-09 01:23:10,829 | INFO     | [job] job monitor thread has finished
[2025-12-08 17:23:53] 2025-12-09 01:23:10,949 | INFO     | all payload control threads have been joined
[2025-12-08 17:23:53] 2025-12-09 01:23:11,214 | INFO     | [payload] failed_post thread has finished
[2025-12-08 17:23:53] 2025-12-09 01:23:11,218 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-08 17:23:53] 2025-12-09 01:23:11,224 | INFO     | all job control threads have been joined
[2025-12-08 17:23:53] 2025-12-09 01:23:11,271 | INFO     | [data] copytool_in thread has finished
[2025-12-08 17:23:53] 2025-12-09 01:23:11,271 | INFO     | [job] validate thread has finished
[2025-12-08 17:23:53] 2025-12-09 01:23:11,383 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-08 17:23:53] 2025-12-09 01:23:11,423 | INFO     | [data] control thread has finished
[2025-12-08 17:23:53] 2025-12-09 01:23:11,474 | INFO     | [job] create_data_payload thread has finished
[2025-12-08 17:23:53] 2025-12-09 01:23:11,525 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-08 17:23:53] 2025-12-09 01:23:11,539 | INFO     | [data] copytool_out thread has finished
[2025-12-08 17:23:53] 2025-12-09 01:23:11,776 | INFO     | [payload] validate_post thread has finished
[2025-12-08 17:23:53] 2025-12-09 01:23:11,955 | INFO     | [payload] control thread has finished
[2025-12-08 17:23:53] 2025-12-09 01:23:12,230 | INFO     | [job] control thread has finished
[2025-12-08 17:23:53] 2025-12-09 01:23:12,391 | INFO     | [job] queue monitor thread has finished
[2025-12-08 17:23:53] 2025-12-09 01:23:15,227 | INFO     | [data] queue_monitor thread has finished
[2025-12-08 17:23:53] 2025-12-09 01:23:40,141 | INFO     | PID=2192451 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-08 17:23:53] 2025-12-09 01:23:40,148 | INFO     | .. there are 12 such processes running
[2025-12-08 17:23:53] 2025-12-09 01:23:40,148 | INFO     | found 0 job(s) in 20 queues
[2025-12-08 17:23:53] 2025-12-09 01:23:40,148 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-08 17:23:53] 2025-12-09 01:23:40,149 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-08 17:23:53] 2025-12-09 01:23:45,898 | INFO     | [monitor] cgroup control has ended
[2025-12-08 17:23:53] 2025-12-09 01:23:47,034 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132793826989888)>', '<ExcThread(monitor, started 132793199748864)>']
[2025-12-08 17:23:53] 2025-12-09 01:23:47,192 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-08 17:23:53] 2025-12-09 01:23:47,193 | INFO     | [monitor] control thread has ended
[2025-12-08 17:23:53] 2025-12-09 01:23:52,059 | INFO     | all workflow threads have been joined
[2025-12-08 17:23:53] 2025-12-09 01:23:52,060 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-08 17:23:53] 2025-12-09 01:23:52,060 | INFO     | traces error code: 0
[2025-12-08 17:23:53] 2025-12-09 01:23:52,060 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-08 17:23:53] 2025-12-09 01:23:52,711 [wrapper] ==== pilot stdout END ====
[2025-12-08 17:23:53] 2025-12-09 01:23:52,728 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-08 17:23:53] 2025-12-09 01:23:52,741 [wrapper] pilotpid: 2192451
[2025-12-08 17:23:53] 2025-12-09 01:23:52,760 [wrapper] Pilot exit status: 0
[2025-12-08 17:23:53] 2025-12-09 01:23:52,825 [wrapper] pandaids: 6905456816
[2025-12-08 17:23:53] 2025-12-09 01:23:53,034 [wrapper] cleanup supervisor_pilot 3435436 2192452
[2025-12-08 17:23:53] 2025-12-09 01:23:53,049 [wrapper] Test setup, not cleaning
[2025-12-08 17:23:53] 2025-12-09 01:23:53,063 [wrapper] apfmon messages muted
[2025-12-08 17:23:53] 2025-12-09 01:23:53,076 [wrapper] ==== wrapper stdout END ====
[2025-12-08 17:23:53] 2025-12-09 01:23:53,083 [wrapper] ==== wrapper stderr END ====
[2025-12-08 17:23:53]  *** Error codes and diagnostics ***
[2025-12-08 17:23:53]     "exeErrorCode": 0,
[2025-12-08 17:23:53]     "exeErrorDiag": "",
[2025-12-08 17:23:53]     "pilotErrorCode": 0,
[2025-12-08 17:23:53]     "pilotErrorDiag": "",
[2025-12-08 17:23:53]  *** Listing of results directory ***
[2025-12-08 17:23:53] total 1093468
[2025-12-08 17:23:53] -rwx------ 1 4871 1028     36292 Nov 29 16:21 runpilot2-wrapper.sh
[2025-12-08 17:23:53] -rw-r--r-- 1 root root    576529 Nov 29 16:24 pilot3.tar.gz
[2025-12-08 17:23:53] -rw-r--r-- 1 root root      5112 Nov 29 16:27 queuedata.json
[2025-12-08 17:23:53] -rw-r--r-- 1 root root       100 Dec  7 22:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-08 17:23:53] -rwxr-xr-x 1 root root      7986 Dec  7 22:51 run_atlas
[2025-12-08 17:23:53] -rw-r--r-- 1 root root       105 Dec  7 22:51 job.xml
[2025-12-08 17:23:53] -rw-r--r-- 2 root root 378183658 Dec  7 22:51 EVNT.47530720._000125.pool.root.1
[2025-12-08 17:23:53] drwxrwx--x 2 root root      4096 Dec  7 22:51 shared
[2025-12-08 17:23:53] -rw-r--r-- 2 root root    590131 Dec  7 22:51 input.tar.gz
[2025-12-08 17:23:53] -rw-r--r-- 2 root root     15847 Dec  7 22:51 start_atlas.sh
[2025-12-08 17:23:53] -rw-r--r-- 1 root root         0 Dec  7 22:51 boinc_setup_complete
[2025-12-08 17:23:53] -rw-r--r-- 1 root root         0 Dec  7 22:51 boinc_lockfile
[2025-12-08 17:23:53] -rw-r--r-- 1 root root      2879 Dec  7 22:51 pandaJob.out
[2025-12-08 17:23:53] -rw------- 1 root root    981501 Dec  7 22:51 agis_schedconf.cvmfs.json
[2025-12-08 17:23:53] drwxr-xr-x 5  320  320      4096 Dec  7 22:51 pilot3
[2025-12-08 17:23:53] -rw-r--r-- 1 root root      9237 Dec  8 03:31 init_data.xml
[2025-12-08 17:23:53] -rw-r--r-- 1 root root       533 Dec  8 16:56 boinc_task_state.xml
[2025-12-08 17:23:53] -rw------- 1 root root 714229012 Dec  8 17:21 HITS.47530725._002648.pool.root.1
[2025-12-08 17:23:53] -rw------- 1 root root      1035 Dec  8 17:22 memory_monitor_summary.json
[2025-12-08 17:23:53] -rw------- 1 root root   1516240 Dec  8 17:22 agis_ddmendpoints.agis.ALL.json
[2025-12-08 17:23:53] -rw------- 1 root root   2550980 Dec  8 17:22 log.47530725._002648.job.log.tgz.1
[2025-12-08 17:23:53] -rw------- 1 root root     26813 Dec  8 17:23 heartbeat.json
[2025-12-08 17:23:53] -rw------- 1 root root        95 Dec  8 17:23 pilot_heartbeat.json
[2025-12-08 17:23:53] -rw-r--r-- 1 root root        29 Dec  8 17:23 wrapper_checkpoint.txt
[2025-12-08 17:23:53] -rw-r--r-- 1 root root      8192 Dec  8 17:23 boinc_mmap_file
[2025-12-08 17:23:53] -rw------- 1 root root      5024 Dec  8 17:23 pilotlog.txt
[2025-12-08 17:23:53] -rw------- 1 root root   9128516 Dec  8 17:23 log.47530725._002648.job.log.1
[2025-12-08 17:23:53] -rw------- 1 root root       353 Dec  8 17:23 output.list
[2025-12-08 17:23:53] -rw-r--r-- 1 root root       620 Dec  8 17:23 runtime_log
[2025-12-08 17:23:53] -rw------- 1 root root  11714560 Dec  8 17:23 result.tar.gz
[2025-12-08 17:23:53] -rw-r--r-- 1 root root      9021 Dec  8 17:23 runtime_log.err
[2025-12-08 17:23:53] -rw------- 1 root root       657 Dec  8 17:23 9JXLDm4Mkj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjaPKDmsMBvym.diag
[2025-12-08 17:23:53] -rw-r--r-- 1 root root     21985 Dec  8 17:23 stderr.txt
[2025-12-08 17:23:53] HITS file was successfully produced:
[2025-12-08 17:23:53] -rw------- 1 root root 714229012 Dec  8 17:21 shared/HITS.pool.root.1
[2025-12-08 17:23:53]  *** Contents of shared directory: ***
[2025-12-08 17:23:53] total 1078856
[2025-12-08 17:23:53] -rw-r--r-- 2 root root 378183658 Dec  7 22:51 ATLAS.root_0
[2025-12-08 17:23:53] -rw-r--r-- 2 root root    590131 Dec  7 22:51 input.tar.gz
[2025-12-08 17:23:53] -rw-r--r-- 2 root root     15847 Dec  7 22:51 start_atlas.sh
[2025-12-08 17:23:53] -rw------- 1 root root 714229012 Dec  8 17:21 HITS.pool.root.1
[2025-12-08 17:23:53] -rw------- 1 root root  11714560 Dec  8 17:23 result.tar.gz
17:23:55 (2188558): run_atlas exited; CPU time 181870.928151
17:23:55 (2188558): called boinc_finish(0)

</stderr_txt>
]]>

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