Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:30:40 (28555): wrapper (7.7.26015): starting
15:30:40 (28555): wrapper: running run_atlas (--nthreads 8)
[2025-12-04 15:30:40] Arguments: --nthreads 8
[2025-12-04 15:30:40] Threads: 8
[2025-12-04 15:30:40] Checking for CVMFS
[2025-12-04 15:30:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-04 15:30:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-04 15:30:41] Running cvmfs_config stat atlas.cern.ch
[2025-12-04 15:30:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-04 15:30:41] 2.11.2.0 25320 296838 145028 153639 1 185 17866366 25165824 1158 130560 12 132351034 99.872 81188916 2915 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-04 15:30:41] CVMFS is ok
[2025-12-04 15:30:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-04 15:30:41] Checking for apptainer binary...
[2025-12-04 15:30:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-04 15:30:41] Running /usr/bin/apptainer --version
[2025-12-04 15:30:41] apptainer version 1.3.2-1.el7
[2025-12-04 15:30:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-04 15:30:42] cg-vwn449.simple-grid.lan
[2025-12-04 15:30:42] apptainer works
[2025-12-04 15:30:42] Set ATHENA_PROC_NUMBER=8
[2025-12-04 15:30:42] Set ATHENA_CORE_NUMBER=8
[2025-12-04 15:30:42] Starting ATLAS job with PandaID=6905169944
[2025-12-04 15:30:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-05 10:32:08]  *** The last 200 lines of the pilot log: ***
[2025-12-05 10:32:08] 2025-12-05 09:31:12,530 | INFO     | fitting pss+swap vs Time
[2025-12-05 10:32:08] 2025-12-05 09:31:12,532 | INFO     | sum of square deviations: 434475995015.1066
[2025-12-05 10:32:08] 2025-12-05 09:31:12,587 | INFO     | sum of deviations: 1549735102728.0605
[2025-12-05 10:32:08] 2025-12-05 09:31:12,587 | INFO     | mean x: 1764892813.0661304
[2025-12-05 10:32:08] 2025-12-05 09:31:12,587 | INFO     | mean y: 3522002.877569258
[2025-12-05 10:32:08] 2025-12-05 09:31:12,587 | INFO     | intersect: -6291685042.717565
[2025-12-05 10:32:08] 2025-12-05 09:31:12,588 | INFO     | chi2: 12.267907975735623
[2025-12-05 10:32:08] 2025-12-05 09:31:12,590 | INFO     | sum of square deviations: 428678231556.89746
[2025-12-05 10:32:08] 2025-12-05 09:31:12,635 | INFO     | sum of deviations: 2050754486695.0493
[2025-12-05 10:32:08] 2025-12-05 09:31:12,635 | INFO     | mean x: 1764892660.5709157
[2025-12-05 10:32:08] 2025-12-05 09:31:12,636 | INFO     | mean y: 3535183.8348294436
[2025-12-05 10:32:08] 2025-12-05 09:31:12,636 | INFO     | intersect: -8439537675.395669
[2025-12-05 10:32:08] 2025-12-05 09:31:12,637 | INFO     | chi2: 8.517875244051003
[2025-12-05 10:32:08] 2025-12-05 09:31:12,637 | INFO     | current chi2=8.517875244051003 (change=30.56782573770289 %)
[2025-12-05 10:32:08] 2025-12-05 09:31:12,639 | INFO     | sum of square deviations: 422932283023.6374
[2025-12-05 10:32:08] 2025-12-05 09:31:12,686 | INFO     | sum of deviations: 2578411028065.0503
[2025-12-05 10:32:08] 2025-12-05 09:31:12,687 | INFO     | mean x: 1764892508.075744
[2025-12-05 10:32:08] 2025-12-05 09:31:12,687 | INFO     | mean y: 3549188.035166817
[2025-12-05 10:32:08] 2025-12-05 09:31:12,687 | INFO     | intersect: -10756136200.931826
[2025-12-05 10:32:08] 2025-12-05 09:31:12,688 | INFO     | chi2: 4.495943466311185
[2025-12-05 10:32:08] 2025-12-05 09:31:12,688 | INFO     | current chi2=4.495943466311185 (change=47.21754736369013 %)
[2025-12-05 10:32:08] 2025-12-05 09:31:12,690 | INFO     | sum of square deviations: 417237849448.9856
[2025-12-05 10:32:08] 2025-12-05 09:31:12,735 | INFO     | sum of deviations: 2785824225108.1626
[2025-12-05 10:32:08] 2025-12-05 09:31:12,735 | INFO     | mean x: 1764892355.5797102
[2025-12-05 10:32:08] 2025-12-05 09:31:12,735 | INFO     | mean y: 3554730.3731884058
[2025-12-05 10:32:08] 2025-12-05 09:31:12,735 | INFO     | intersect: -11780323183.3282
[2025-12-05 10:32:08] 2025-12-05 09:31:12,737 | INFO     | chi2: 3.278816947258844
[2025-12-05 10:32:08] 2025-12-05 09:31:12,737 | INFO     | current chi2=3.278816947258844 (change=27.071659778919866 %)
[2025-12-05 10:32:08] 2025-12-05 09:31:12,738 | INFO     | sum of square deviations: 411594496058.9545
[2025-12-05 10:32:08] 2025-12-05 09:31:12,768 | INFO     | sum of deviations: 2786514356970.6772
[2025-12-05 10:32:08] 2025-12-05 09:31:12,769 | INFO     | mean x: 1764892203.0800729
[2025-12-05 10:32:08] 2025-12-05 09:31:12,769 | INFO     | mean y: 3554749.026387625
[2025-12-05 10:32:08] 2025-12-05 09:31:12,769 | INFO     | intersect: -11944849589.412138
[2025-12-05 10:32:08] 2025-12-05 09:31:12,770 | INFO     | chi2: 3.26148199674896
[2025-12-05 10:32:08] 2025-12-05 09:31:12,770 | INFO     | current chi2=3.26148199674896 (change=0.5286952821314547 %)
[2025-12-05 10:32:08] 2025-12-05 09:31:12,770 | INFO     | right removable region: 1098
[2025-12-05 10:32:08] 2025-12-05 09:31:12,772 | INFO     | sum of square deviations: 428677503826.89746
[2025-12-05 10:32:08] 2025-12-05 09:31:12,807 | INFO     | sum of deviations: 1115498770365.8545
[2025-12-05 10:32:08] 2025-12-05 09:31:12,807 | INFO     | mean x: 1764892965.5709157
[2025-12-05 10:32:08] 2025-12-05 09:31:12,807 | INFO     | mean y: 3533416.748653501
[2025-12-05 10:32:08] 2025-12-05 09:31:12,807 | INFO     | intersect: -4589047055.392684
[2025-12-05 10:32:08] 2025-12-05 09:31:12,809 | INFO     | chi2: 9.622067228846088
[2025-12-05 10:32:08] 2025-12-05 09:31:12,809 | INFO     | current chi2=9.622067228846088 (change=21.567171453541018 %)
[2025-12-05 10:32:08] 2025-12-05 09:31:12,809 | INFO     | left removable region: 10
[2025-12-05 10:32:08] 2025-12-05 09:31:12,811 | INFO     | sum of square deviations: 399358346598.2206
[2025-12-05 10:32:08] 2025-12-05 09:31:12,852 | INFO     | sum of deviations: 2243025286966.7847
[2025-12-05 10:32:08] 2025-12-05 09:31:12,852 | INFO     | mean x: 1764892477.5845587
[2025-12-05 10:32:08] 2025-12-05 09:31:12,852 | INFO     | mean y: 3569624.2849264704
[2025-12-05 10:32:08] 2025-12-05 09:31:12,852 | INFO     | intersect: -9909077725.44562
[2025-12-05 10:32:08] 2025-12-05 09:31:12,853 | INFO     | chi2: 0.44993207102393845
[2025-12-05 10:32:08] 2025-12-05 09:31:12,854 | INFO     | current memory leak: 5.62 B/s (using 1088 data points, chi2=0.45)
[2025-12-05 10:32:08] 2025-12-05 09:31:12,855 | INFO     | could have reported an average CPU frequency of 1999 MHz (39 samples)
[2025-12-05 10:32:08] 2025-12-05 09:31:12,856 | INFO     | ..............................
[2025-12-05 10:32:08] 2025-12-05 09:31:12,856 | INFO     | . Timing measurements:
[2025-12-05 10:32:08] 2025-12-05 09:31:12,856 | INFO     | . get job = 0 s
[2025-12-05 10:32:08] 2025-12-05 09:31:12,856 | INFO     | . initial setup = 2 s
[2025-12-05 10:32:08] 2025-12-05 09:31:12,856 | INFO     | . payload setup = 16 s
[2025-12-05 10:32:08] 2025-12-05 09:31:12,856 | INFO     | . stage-in = 0 s
[2025-12-05 10:32:08] 2025-12-05 09:31:12,856 | INFO     | . payload execution = 68270 s
[2025-12-05 10:32:08] 2025-12-05 09:31:12,856 | INFO     | . stage-out = 4 s
[2025-12-05 10:32:08] 2025-12-05 09:31:12,856 | INFO     | . log creation = 2 s
[2025-12-05 10:32:08] 2025-12-05 09:31:12,856 | INFO     | ..............................
[2025-12-05 10:32:08] 2025-12-05 09:31:12,993 | INFO     | 
[2025-12-05 10:32:08] 2025-12-05 09:31:12,993 | INFO     | job summary report
[2025-12-05 10:32:08] 2025-12-05 09:31:12,993 | INFO     | --------------------------------------------------
[2025-12-05 10:32:08] 2025-12-05 09:31:12,993 | INFO     | PanDA job id: 6905169944
[2025-12-05 10:32:08] 2025-12-05 09:31:12,993 | INFO     | task id: 47538113
[2025-12-05 10:32:08] 2025-12-05 09:31:12,993 | INFO     | errors: (none)
[2025-12-05 10:32:08] 2025-12-05 09:31:12,993 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-05 10:32:08] 2025-12-05 09:31:12,993 | INFO     | pilot state: finished 
[2025-12-05 10:32:08] 2025-12-05 09:31:12,993 | INFO     | transexitcode: 0
[2025-12-05 10:32:08] 2025-12-05 09:31:12,994 | INFO     | exeerrorcode: 0
[2025-12-05 10:32:08] 2025-12-05 09:31:12,994 | INFO     | exeerrordiag: 
[2025-12-05 10:32:08] 2025-12-05 09:31:12,994 | INFO     | exitcode: 0
[2025-12-05 10:32:08] 2025-12-05 09:31:12,994 | INFO     | exitmsg: OK
[2025-12-05 10:32:08] 2025-12-05 09:31:12,994 | INFO     | cpuconsumptiontime: 258528 s
[2025-12-05 10:32:08] 2025-12-05 09:31:12,994 | INFO     | nevents: 1000
[2025-12-05 10:32:08] 2025-12-05 09:31:12,994 | INFO     | neventsw: 0
[2025-12-05 10:32:08] 2025-12-05 09:31:12,994 | INFO     | pid: 7077
[2025-12-05 10:32:08] 2025-12-05 09:31:12,994 | INFO     | pgrp: 7077
[2025-12-05 10:32:08] 2025-12-05 09:31:12,994 | INFO     | corecount: 8
[2025-12-05 10:32:08] 2025-12-05 09:31:12,994 | INFO     | event service: False
[2025-12-05 10:32:08] 2025-12-05 09:31:12,994 | INFO     | sizes: {0: 2284229, 1: 2284428, 8: 2284690, 12: 2284718, 68288: 2359061, 68293: 2368055, 68295: 2368239, 68394: 2368263}
[2025-12-05 10:32:08] 2025-12-05 09:31:12,994 | INFO     | --------------------------------------------------
[2025-12-05 10:32:08] 2025-12-05 09:31:12,995 | INFO     | 
[2025-12-05 10:32:08] 2025-12-05 09:31:12,995 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-12-05 10:32:08] 2025-12-05 09:31:13,387 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-05 10:32:08] 2025-12-05 09:31:13,387 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-05 10:32:08] 2025-12-05 09:31:13,387 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-05 10:32:08] 2025-12-05 09:31:13,387 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-05 10:32:08] 2025-12-05 09:31:13,387 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-05 10:32:08] 2025-12-05 09:31:13,387 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-05 10:32:08] 2025-12-05 09:31:13,388 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-05 10:32:08] 2025-12-05 09:31:13,388 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-05 10:32:08] 2025-12-05 09:31:13,388 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-05 10:32:08] 2025-12-05 09:31:13,388 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-05 10:32:08] 2025-12-05 09:31:13,388 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-05 10:32:08] 2025-12-05 09:31:13,388 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-05 10:32:08] 2025-12-05 09:31:13,388 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-05 10:32:08] 2025-12-05 09:31:13,388 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-05 10:32:08] 2025-12-05 09:31:13,388 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-05 10:32:08] 2025-12-05 09:31:13,388 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-05 10:32:08] 2025-12-05 09:31:13,388 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-05 10:32:08] 2025-12-05 09:31:13,388 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-05 10:32:08] 2025-12-05 09:31:13,388 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-05 10:32:08] 2025-12-05 09:31:13,388 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-05 10:32:08] 2025-12-05 09:31:13,388 | INFO     | job 6905169944 has completed (purged errors)
[2025-12-05 10:32:08] 2025-12-05 09:31:13,389 | INFO     | overall cleanup function is called
[2025-12-05 10:32:08] 2025-12-05 09:31:14,405 | INFO     | --- collectZombieJob: --- 10, [7077]
[2025-12-05 10:32:08] 2025-12-05 09:31:14,405 | INFO     | zombie collector waiting for pid 7077
[2025-12-05 10:32:08] 2025-12-05 09:31:14,405 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-05 10:32:08] 2025-12-05 09:31:14,405 | INFO     | collected zombie processes
[2025-12-05 10:32:08] 2025-12-05 09:31:14,405 | INFO     | will attempt to kill all subprocesses of pid=7077
[2025-12-05 10:32:08] 2025-12-05 09:31:14,509 | INFO     | process IDs to be killed: [7077] (in reverse order)
[2025-12-05 10:32:08] 2025-12-05 09:31:15,542 | WARNING  | found no corresponding commands to process id(s)
[2025-12-05 10:32:08] 2025-12-05 09:31:15,543 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-05 10:32:08] 2025-12-05 09:31:15,546 | INFO     | did not find any defunct processes belonging to 7077
[2025-12-05 10:32:08] 2025-12-05 09:31:15,548 | INFO     | did not find any defunct processes belonging to 7077
[2025-12-05 10:32:08] 2025-12-05 09:31:15,558 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-05 10:32:08] 2025-12-05 09:31:15,559 | INFO     | ready for new job
[2025-12-05 10:32:08] 2025-12-05 09:31:15,559 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-05 10:32:08] 2025-12-05 09:31:15,563 | INFO     | ***************************************
[2025-12-05 10:32:08] 2025-12-05 09:31:15,563 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-05 10:32:08] 2025-12-05 09:31:15,563 | INFO     | ***************************************
[2025-12-05 10:32:08] 2025-12-05 09:31:15,563 | INFO     | 
[2025-12-05 10:32:08] 2025-12-05 09:31:15,564 | INFO     | pilot is running in a VM
[2025-12-05 10:32:08] 2025-12-05 09:31:15,564 | INFO     | architecture information:
[2025-12-05 10:32:08] 2025-12-05 09:31:15,565 | INFO     | executing command: cat /etc/os-release
[2025-12-05 10:32:08] 2025-12-05 09:31:15,678 | INFO     | cat /etc/os-release:
[2025-12-05 10:32:08] NAME="CentOS Linux"
[2025-12-05 10:32:08] VERSION="7 (Core)"
[2025-12-05 10:32:08] ID="centos"
[2025-12-05 10:32:08] ID_LIKE="rhel fedora"
[2025-12-05 10:32:08] VERSION_ID="7"
[2025-12-05 10:32:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-05 10:32:08] ANSI_COLOR="0;31"
[2025-12-05 10:32:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-05 10:32:08] HOME_URL="https://www.centos.org/"
[2025-12-05 10:32:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-05 10:32:08] 
[2025-12-05 10:32:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-05 10:32:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-05 10:32:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-05 10:32:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-05 10:32:08] 
[2025-12-05 10:32:08] 2025-12-05 09:31:15,678 | INFO     | ***************************************
[2025-12-05 10:32:08] 2025-12-05 09:31:16,182 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-12-05 10:32:08] 2025-12-05 09:31:16,424 | INFO     | sufficient remaining disk space (496984129536 B)
[2025-12-05 10:32:08] 2025-12-05 09:31:16,425 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-05 10:32:08] 2025-12-05 09:31:16,425 | INFO     | current server update state: UPDATING_FINAL
[2025-12-05 10:32:08] 2025-12-05 09:31:16,425 | INFO     | update_server=False
[2025-12-05 10:32:08] 2025-12-05 09:31:16,425 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-05 10:32:08] 2025-12-05 09:31:16,426 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-05 10:32:08] 2025-12-05 09:31:16,426 | INFO     | aborting loop
[2025-12-05 10:32:08] 2025-12-05 09:31:16,433 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-05 10:32:08] 2025-12-05 09:31:16,728 | INFO     | all job control threads have been joined
[2025-12-05 10:32:08] 2025-12-05 09:31:17,051 | INFO     | all data control threads have been joined
[2025-12-05 10:32:08] 2025-12-05 09:31:17,391 | INFO     | all payload control threads have been joined
[2025-12-05 10:32:08] 2025-12-05 09:31:17,431 | INFO     | [job] retrieve thread has finished
[2025-12-05 10:32:08] 2025-12-05 09:31:17,432 | INFO     | [job] job monitor thread has finished
[2025-12-05 10:32:08] 2025-12-05 09:31:17,601 | INFO     | [payload] validate_post thread has finished
[2025-12-05 10:32:08] 2025-12-05 09:31:17,734 | INFO     | [job] control thread has finished
[2025-12-05 10:32:08] 2025-12-05 09:31:17,941 | INFO     | [payload] execute_payloads thread has finished
[2025-12-05 10:32:08] 2025-12-05 09:31:18,011 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-05 10:32:08] 2025-12-05 09:31:18,057 | INFO     | [data] control thread has finished
[2025-12-05 10:32:08] 2025-12-05 09:31:18,121 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-05 10:32:08] 2025-12-05 09:31:18,143 | INFO     | [data] copytool_in thread has finished
[2025-12-05 10:32:08] 2025-12-05 09:31:18,397 | INFO     | [payload] control thread has finished
[2025-12-05 10:32:08] 2025-12-05 09:31:18,440 | INFO     | [data] copytool_out thread has finished
[2025-12-05 10:32:08] 2025-12-05 09:31:18,497 | INFO     | [job] validate thread has finished
[2025-12-05 10:32:08] 2025-12-05 09:31:18,547 | INFO     | [payload] validate_pre thread has finished
[2025-12-05 10:32:08] 2025-12-05 09:31:18,587 | INFO     | [payload] failed_post thread has finished
[2025-12-05 10:32:08] 2025-12-05 09:31:18,860 | INFO     | [job] create_data_payload thread has finished
[2025-12-05 10:32:08] 2025-12-05 09:31:19,017 | INFO     | [job] queue monitor thread has finished
[2025-12-05 10:32:08] 2025-12-05 09:31:19,251 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-05 10:32:08] 2025-12-05 09:31:23,260 | INFO     | [data] queue_monitor thread has finished
[2025-12-05 10:32:08] 2025-12-05 09:31:45,269 | INFO     | PID=32294 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-05 10:32:08] 2025-12-05 09:31:45,269 | INFO     | .. there are 9 such processes running
[2025-12-05 10:32:08] 2025-12-05 09:31:45,269 | INFO     | found 0 job(s) in 20 queues
[2025-12-05 10:32:08] 2025-12-05 09:31:45,269 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-05 10:32:08] 2025-12-05 09:31:45,269 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-05 10:32:08] 2025-12-05 09:31:53,642 [wrapper] supervise_pilot (15 min periods counter: 77)
[2025-12-05 10:32:08] 2025-12-05 09:31:58,870 | INFO     | [monitor] cgroup control has ended
[2025-12-05 10:32:08] 2025-12-05 09:31:59,043 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140071394445120)>', '<ExcThread(monitor, started 140070820505344)>']
[2025-12-05 10:32:08] 2025-12-05 09:31:59,350 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-05 10:32:08] 2025-12-05 09:31:59,350 | INFO     | [monitor] control thread has ended
[2025-12-05 10:32:08] 2025-12-05 09:32:04,069 | INFO     | all workflow threads have been joined
[2025-12-05 10:32:08] 2025-12-05 09:32:04,069 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-05 10:32:08] 2025-12-05 09:32:04,069 | INFO     | traces error code: 0
[2025-12-05 10:32:08] 2025-12-05 09:32:04,069 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-05 10:32:08] 2025-12-05 09:32:04,344 [wrapper] ==== pilot stdout END ====
[2025-12-05 10:32:08] 2025-12-05 09:32:04,434 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-05 10:32:08] 2025-12-05 09:32:04,524 [wrapper] pilotpid: 32294
[2025-12-05 10:32:08] 2025-12-05 09:32:04,629 [wrapper] Pilot exit status: 0
[2025-12-05 10:32:08] 2025-12-05 09:32:05,015 [wrapper] pandaids: 6905169944
[2025-12-05 10:32:08] 2025-12-05 09:32:05,557 [wrapper] cleanup supervisor_pilot 32266 32295
[2025-12-05 10:32:08] 2025-12-05 09:32:05,654 [wrapper] Test setup, not cleaning
[2025-12-05 10:32:08] 2025-12-05 09:32:05,755 [wrapper] apfmon messages muted
[2025-12-05 10:32:08] 2025-12-05 09:32:05,844 [wrapper] ==== wrapper stdout END ====
[2025-12-05 10:32:08] 2025-12-05 09:32:05,892 [wrapper] ==== wrapper stderr END ====
[2025-12-05 10:32:08]  *** Error codes and diagnostics ***
[2025-12-05 10:32:08]     "exeErrorCode": 0,
[2025-12-05 10:32:08]     "exeErrorDiag": "",
[2025-12-05 10:32:08]     "pilotErrorCode": 0,
[2025-12-05 10:32:08]     "pilotErrorDiag": "",
[2025-12-05 10:32:08]  *** Listing of results directory ***
[2025-12-05 10:32:08] total 1074188
[2025-12-05 10:32:08] -rw-r--r--. 1 boinc boinc      5112 Nov 30 01:16 queuedata.json
[2025-12-05 10:32:08] -rw-r--r--. 1 boinc boinc    576529 Nov 30 01:16 pilot3.tar.gz
[2025-12-05 10:32:08] -rwx------. 1 boinc boinc     36292 Nov 30 01:16 runpilot2-wrapper.sh
[2025-12-05 10:32:08] -rw-r--r--. 1 boinc boinc       100 Dec  4 15:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-05 10:32:08] -rwxr-xr-x. 1 boinc boinc      7986 Dec  4 15:30 run_atlas
[2025-12-05 10:32:08] -rw-r--r--. 1 boinc boinc       105 Dec  4 15:30 job.xml
[2025-12-05 10:32:08] -rw-r--r--. 2 boinc boinc 376621186 Dec  4 15:30 EVNT.47528871._000088.pool.root.1
[2025-12-05 10:32:08] -rw-r--r--. 2 boinc boinc    590139 Dec  4 15:30 input.tar.gz
[2025-12-05 10:32:08] -rw-r--r--. 1 boinc boinc      6392 Dec  4 15:30 init_data.xml
[2025-12-05 10:32:08] -rw-r--r--. 2 boinc boinc     15847 Dec  4 15:30 start_atlas.sh
[2025-12-05 10:32:08] drwxrwx--x. 2 boinc boinc        68 Dec  4 15:30 shared
[2025-12-05 10:32:08] -rw-r--r--. 1 boinc boinc         0 Dec  4 15:30 boinc_lockfile
[2025-12-05 10:32:08] -rw-r--r--. 1 boinc boinc      2879 Dec  4 15:30 pandaJob.out
[2025-12-05 10:32:08] -rw-------. 1 boinc boinc    985572 Dec  4 15:30 agis_schedconf.cvmfs.json
[2025-12-05 10:32:08] drwx------. 5 boinc boinc      4096 Dec  4 15:31 pilot3
[2025-12-05 10:32:08] -rw-r--r--. 1 boinc boinc       533 Dec  5 10:14 boinc_task_state.xml
[2025-12-05 10:32:08] -rw-------. 1 boinc boinc 696354270 Dec  5 10:28 HITS.47538113._002570.pool.root.1
[2025-12-05 10:32:08] -rw-------. 1 boinc boinc      1032 Dec  5 10:29 memory_monitor_summary.json
[2025-12-05 10:32:08] -rw-------. 1 boinc boinc   1516240 Dec  5 10:29 agis_ddmendpoints.agis.ALL.json
[2025-12-05 10:32:08] -rw-------. 1 boinc boinc   2360815 Dec  5 10:29 log.47538113._002570.job.log.tgz.1
[2025-12-05 10:32:08] -rw-------. 1 boinc boinc        95 Dec  5 10:31 pilot_heartbeat.json
[2025-12-05 10:32:08] -rw-------. 1 boinc boinc     28353 Dec  5 10:31 heartbeat.json
[2025-12-05 10:32:08] -rw-r--r--. 1 boinc boinc        29 Dec  5 10:31 wrapper_checkpoint.txt
[2025-12-05 10:32:08] -rw-r--r--. 1 boinc boinc      8192 Dec  5 10:31 boinc_mmap_file
[2025-12-05 10:32:08] -rw-------. 1 boinc boinc      4884 Dec  5 10:32 pilotlog.txt
[2025-12-05 10:32:08] -rw-------. 1 boinc boinc   9168244 Dec  5 10:32 log.47538113._002570.job.log.1
[2025-12-05 10:32:08] -rw-------. 1 boinc boinc       353 Dec  5 10:32 output.list
[2025-12-05 10:32:08] -rw-r--r--. 1 boinc boinc       620 Dec  5 10:32 runtime_log
[2025-12-05 10:32:08] -rw-------. 1 boinc boinc  11571200 Dec  5 10:32 result.tar.gz
[2025-12-05 10:32:08] -rw-------. 1 boinc boinc       660 Dec  5 10:32 VUiKDmcIkj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmGFPKDmYSLxun.diag
[2025-12-05 10:32:08] -rw-r--r--. 1 boinc boinc      8817 Dec  5 10:32 runtime_log.err
[2025-12-05 10:32:08] -rw-r--r--. 1 boinc boinc     20778 Dec  5 10:32 stderr.txt
[2025-12-05 10:32:08] HITS file was successfully produced:
[2025-12-05 10:32:08] -rw-------. 1 boinc boinc 696354270 Dec  5 10:28 shared/HITS.pool.root.1
[2025-12-05 10:32:08]  *** Contents of shared directory: ***
[2025-12-05 10:32:08] total 1059728
[2025-12-05 10:32:08] -rw-r--r--. 2 boinc boinc 376621186 Dec  4 15:30 ATLAS.root_0
[2025-12-05 10:32:08] -rw-r--r--. 2 boinc boinc    590139 Dec  4 15:30 input.tar.gz
[2025-12-05 10:32:08] -rw-r--r--. 2 boinc boinc     15847 Dec  4 15:30 start_atlas.sh
[2025-12-05 10:32:08] -rw-------. 1 boinc boinc 696354270 Dec  5 10:28 HITS.pool.root.1
[2025-12-05 10:32:08] -rw-------. 1 boinc boinc  11571200 Dec  5 10:32 result.tar.gz
10:32:09 (28555): run_atlas exited; CPU time 258788.890922
10:32:09 (28555): called boinc_finish(0)

</stderr_txt>
]]>

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