Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
07:33:08 (2791475): wrapper (7.7.26015): starting
07:33:08 (2791475): wrapper: running run_atlas (--nthreads 10)
[2025-12-08 07:33:08] Arguments: --nthreads 10
[2025-12-08 07:33:08] Threads: 10
[2025-12-08 07:33:08] Checking for CVMFS
[2025-12-08 07:33:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-08 07:33:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-08 07:33:08] Running cvmfs_config stat atlas.cern.ch
[2025-12-08 07:33:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-08 07:33:09] 2.13.3.0 8606 9953 65068 153770 3 121 3624055 4096001 9853 130560 0 32471090 99.974 1028401 675 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-12-08 07:33:09] CVMFS is ok
[2025-12-08 07:33:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-08 07:33:09] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-08 07:33:09] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-08 07:33:09] Further information can be found at the LHC@home message board.
[2025-12-08 07:33:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-08 07:33:09] Checking for apptainer binary...
[2025-12-08 07:33:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-08 07:33:09] Running /usr/bin/apptainer --version
[2025-12-08 07:33:09] apptainer version 1.4.2
[2025-12-08 07:33:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-08 07:33:10] 3950x-linux
[2025-12-08 07:33:10] apptainer works
[2025-12-08 07:33:10] Set ATHENA_PROC_NUMBER=10
[2025-12-08 07:33:10] Set ATHENA_CORE_NUMBER=10
[2025-12-08 07:33:10] Starting ATLAS job with PandaID=6895356047
[2025-12-08 07:33:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc241/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-09 03:55:16]  *** The last 200 lines of the pilot log: ***
[2025-12-09 03:55:16] 2025-12-09 11:54:42,160 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-09 03:55:16] 2025-12-09 11:54:42,171 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3400.12865625
[2025-12-09 03:55:16] 2025-12-09 11:54:42,182 | INFO     | using path: /var/lib/multiboinc/boinc241/slots/3/PanDA_Pilot-6895356047/memory_monitor_summary.json (trf name=prmon)
[2025-12-09 03:55:16] 2025-12-09 11:54:42,182 | INFO     | extracted standard info from prmon json
[2025-12-09 03:55:16] 2025-12-09 11:54:42,182 | INFO     | extracted standard memory fields from prmon json
[2025-12-09 03:55:16] 2025-12-09 11:54:42,182 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-09 03:55:16] 2025-12-09 11:54:42,213 | INFO     | fitting pss+swap vs Time
[2025-12-09 03:55:16] 2025-12-09 11:54:42,214 | INFO     | sum of square deviations: 535806811414.89246
[2025-12-09 03:55:16] 2025-12-09 11:54:42,289 | INFO     | sum of deviations: 3274166141633.569
[2025-12-09 03:55:16] 2025-12-09 11:54:42,289 | INFO     | mean x: 1765244676.1475
[2025-12-09 03:55:16] 2025-12-09 11:54:42,289 | INFO     | mean y: 3137915.155
[2025-12-09 03:55:16] 2025-12-09 11:54:42,289 | INFO     | intersect: -10783780480.075417
[2025-12-09 03:55:16] 2025-12-09 11:54:42,290 | INFO     | chi2: 9.524249121023816
[2025-12-09 03:55:16] 2025-12-09 11:54:42,294 | INFO     | sum of square deviations: 529138216623.0928
[2025-12-09 03:55:16] 2025-12-09 11:54:42,367 | INFO     | sum of deviations: 3718882251530.4365
[2025-12-09 03:55:16] 2025-12-09 11:54:42,371 | INFO     | mean x: 1765244523.6627614
[2025-12-09 03:55:16] 2025-12-09 11:54:42,371 | INFO     | mean y: 3148082.879497908
[2025-12-09 03:55:16] 2025-12-09 11:54:42,371 | INFO     | intersect: -12403320250.774866
[2025-12-09 03:55:16] 2025-12-09 11:54:42,372 | INFO     | chi2: 6.313450099432536
[2025-12-09 03:55:16] 2025-12-09 11:54:42,372 | INFO     | current chi2=6.313450099432536 (change=33.71183366575078 %)
[2025-12-09 03:55:16] 2025-12-09 11:54:42,373 | INFO     | sum of square deviations: 522525058856.94135
[2025-12-09 03:55:16] 2025-12-09 11:54:42,412 | INFO     | time since job start (73257s) is within the limit (172800.0s)
[2025-12-09 03:55:16] 2025-12-09 11:54:42,439 | INFO     | sum of deviations: 3987920438309.1216
[2025-12-09 03:55:16] 2025-12-09 11:54:42,442 | INFO     | mean x: 1765244371.1764705
[2025-12-09 03:55:16] 2025-12-09 11:54:42,443 | INFO     | mean y: 3154282.618487395
[2025-12-09 03:55:16] 2025-12-09 11:54:42,443 | INFO     | intersect: -13469221801.744806
[2025-12-09 03:55:16] 2025-12-09 11:54:42,444 | INFO     | chi2: 4.934335800780208
[2025-12-09 03:55:16] 2025-12-09 11:54:42,444 | INFO     | current chi2=4.934335800780208 (change=21.844067458081046 %)
[2025-12-09 03:55:16] 2025-12-09 11:54:42,444 | INFO     | right removable region: 1189
[2025-12-09 03:55:16] 2025-12-09 11:54:42,445 | INFO     | sum of square deviations: 529135546653.0928
[2025-12-09 03:55:16] 2025-12-09 11:54:42,511 | INFO     | sum of deviations: 2795570941513.665
[2025-12-09 03:55:16] 2025-12-09 11:54:42,511 | INFO     | mean x: 1765244828.6627614
[2025-12-09 03:55:16] 2025-12-09 11:54:42,511 | INFO     | mean y: 3148853.3564853556
[2025-12-09 03:55:16] 2025-12-09 11:54:42,511 | INFO     | intersect: -9323132812.808422
[2025-12-09 03:55:16] 2025-12-09 11:54:42,512 | INFO     | chi2: 6.085910752122177
[2025-12-09 03:55:16] 2025-12-09 11:54:42,512 | INFO     | current chi2=6.085910752122177 (change=36.10088653930581 %)
[2025-12-09 03:55:16] 2025-12-09 11:54:42,516 | INFO     | sum of square deviations: 522520300626.33923
[2025-12-09 03:55:16] 2025-12-09 11:54:42,571 | INFO     | sum of deviations: 2550184132698.1387
[2025-12-09 03:55:16] 2025-12-09 11:54:42,572 | INFO     | mean x: 1765244981.1731093
[2025-12-09 03:55:16] 2025-12-09 11:54:42,572 | INFO     | mean y: 3154505.4168067225
[2025-12-09 03:55:16] 2025-12-09 11:54:42,572 | INFO     | intersect: -8612204047.957197
[2025-12-09 03:55:16] 2025-12-09 11:54:42,578 | INFO     | chi2: 5.165274718587346
[2025-12-09 03:55:16] 2025-12-09 11:54:42,578 | INFO     | current chi2=5.165274718587346 (change=15.127333788353733 %)
[2025-12-09 03:55:16] 2025-12-09 11:54:42,578 | INFO     | left removable region: 20
[2025-12-09 03:55:16] 2025-12-09 11:54:42,579 | INFO     | sum of square deviations: 495344537917.59106
[2025-12-09 03:55:16] 2025-12-09 11:54:42,633 | INFO     | sum of deviations: 3114224012491.721
[2025-12-09 03:55:16] 2025-12-09 11:54:42,634 | INFO     | mean x: 1765244950.7040205
[2025-12-09 03:55:16] 2025-12-09 11:54:42,634 | INFO     | mean y: 3176526.869118905
[2025-12-09 03:55:16] 2025-12-09 11:54:42,634 | INFO     | intersect: -11094893185.422338
[2025-12-09 03:55:16] 2025-12-09 11:54:42,638 | INFO     | chi2: 0.2846524499542789
[2025-12-09 03:55:16] 2025-12-09 11:54:42,638 | INFO     | current memory leak: 6.29 B/s (using 1169 data points, chi2=0.28)
[2025-12-09 03:55:16] 2025-12-09 11:54:42,639 | INFO     | could have reported an average CPU frequency of 3400 MHz (44 samples)
[2025-12-09 03:55:16] 2025-12-09 11:54:42,639 | INFO     | ..............................
[2025-12-09 03:55:16] 2025-12-09 11:54:42,639 | INFO     | . Timing measurements:
[2025-12-09 03:55:16] 2025-12-09 11:54:42,639 | INFO     | . get job = 0 s
[2025-12-09 03:55:16] 2025-12-09 11:54:42,639 | INFO     | . initial setup = 5 s
[2025-12-09 03:55:16] 2025-12-09 11:54:42,639 | INFO     | . payload setup = 21 s
[2025-12-09 03:55:16] 2025-12-09 11:54:42,639 | INFO     | . stage-in = 0 s
[2025-12-09 03:55:16] 2025-12-09 11:54:42,639 | INFO     | . payload execution = 73170 s
[2025-12-09 03:55:16] 2025-12-09 11:54:42,640 | INFO     | . stage-out = 5 s
[2025-12-09 03:55:16] 2025-12-09 11:54:42,640 | INFO     | . log creation = 1 s
[2025-12-09 03:55:16] 2025-12-09 11:54:42,640 | INFO     | ..............................
[2025-12-09 03:55:16] 2025-12-09 11:54:42,725 | INFO     | 
[2025-12-09 03:55:16] 2025-12-09 11:54:42,725 | INFO     | job summary report
[2025-12-09 03:55:16] 2025-12-09 11:54:42,725 | INFO     | --------------------------------------------------
[2025-12-09 03:55:16] 2025-12-09 11:54:42,725 | INFO     | PanDA job id: 6895356047
[2025-12-09 03:55:16] 2025-12-09 11:54:42,725 | INFO     | task id: 47556137
[2025-12-09 03:55:16] 2025-12-09 11:54:42,726 | INFO     | errors: (none)
[2025-12-09 03:55:16] 2025-12-09 11:54:42,726 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-09 03:55:16] 2025-12-09 11:54:42,726 | INFO     | pilot state: finished 
[2025-12-09 03:55:16] 2025-12-09 11:54:42,726 | INFO     | transexitcode: 0
[2025-12-09 03:55:16] 2025-12-09 11:54:42,726 | INFO     | exeerrorcode: 0
[2025-12-09 03:55:16] 2025-12-09 11:54:42,726 | INFO     | exeerrordiag: 
[2025-12-09 03:55:16] 2025-12-09 11:54:42,726 | INFO     | exitcode: 0
[2025-12-09 03:55:16] 2025-12-09 11:54:42,726 | INFO     | exitmsg: OK
[2025-12-09 03:55:16] 2025-12-09 11:54:42,726 | INFO     | cpuconsumptiontime: 206131 s
[2025-12-09 03:55:16] 2025-12-09 11:54:42,726 | INFO     | nevents: 1000
[2025-12-09 03:55:16] 2025-12-09 11:54:42,726 | INFO     | neventsw: 0
[2025-12-09 03:55:16] 2025-12-09 11:54:42,726 | INFO     | pid: 2805579
[2025-12-09 03:55:16] 2025-12-09 11:54:42,726 | INFO     | pgrp: 2805579
[2025-12-09 03:55:16] 2025-12-09 11:54:42,726 | INFO     | corecount: 10
[2025-12-09 03:55:16] 2025-12-09 11:54:42,726 | INFO     | event service: False
[2025-12-09 03:55:16] 2025-12-09 11:54:42,726 | INFO     | sizes: {0: 2283487, 1: 2284186, 2: 2284385, 13: 2284385, 18: 2284703, 24: 2284731, 73195: 2345577, 73202: 2354599, 73204: 2354655, 73217: 2354901}
[2025-12-09 03:55:16] 2025-12-09 11:54:42,727 | INFO     | --------------------------------------------------
[2025-12-09 03:55:16] 2025-12-09 11:54:42,727 | INFO     | 
[2025-12-09 03:55:16] 2025-12-09 11:54:42,727 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc241/slots/3
[2025-12-09 03:55:16] 2025-12-09 11:54:42,767 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-09 03:55:16] 2025-12-09 11:54:42,768 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-09 03:55:16] 2025-12-09 11:54:42,768 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-09 03:55:16] 2025-12-09 11:54:42,768 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-09 03:55:16] 2025-12-09 11:54:42,768 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-09 03:55:16] 2025-12-09 11:54:42,768 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-09 03:55:16] 2025-12-09 11:54:42,768 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-09 03:55:16] 2025-12-09 11:54:42,768 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-09 03:55:16] 2025-12-09 11:54:42,768 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-09 03:55:16] 2025-12-09 11:54:42,768 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-09 03:55:16] 2025-12-09 11:54:42,768 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-09 03:55:16] 2025-12-09 11:54:42,768 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-09 03:55:16] 2025-12-09 11:54:42,769 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-09 03:55:16] 2025-12-09 11:54:42,769 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-09 03:55:16] 2025-12-09 11:54:42,769 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-09 03:55:16] 2025-12-09 11:54:42,769 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-09 03:55:16] 2025-12-09 11:54:42,769 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-09 03:55:16] 2025-12-09 11:54:42,769 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-09 03:55:16] 2025-12-09 11:54:42,769 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-09 03:55:16] 2025-12-09 11:54:42,769 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-09 03:55:16] 2025-12-09 11:54:42,769 | INFO     | job 6895356047 has completed (purged errors)
[2025-12-09 03:55:16] 2025-12-09 11:54:42,769 | INFO     | overall cleanup function is called
[2025-12-09 03:55:16] 2025-12-09 11:54:43,808 | INFO     | --- collectZombieJob: --- 10, [2805579]
[2025-12-09 03:55:16] 2025-12-09 11:54:43,809 | INFO     | zombie collector waiting for pid 2805579
[2025-12-09 03:55:16] 2025-12-09 11:54:43,809 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-09 03:55:16] 2025-12-09 11:54:43,809 | INFO     | collected zombie processes
[2025-12-09 03:55:16] 2025-12-09 11:54:43,809 | INFO     | will attempt to kill all subprocesses of pid=2805579
[2025-12-09 03:55:16] 2025-12-09 11:54:44,160 | INFO     | process IDs to be killed: [2805579] (in reverse order)
[2025-12-09 03:55:16] 2025-12-09 11:54:44,381 | WARNING  | found no corresponding commands to process id(s)
[2025-12-09 03:55:16] 2025-12-09 11:54:44,381 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-09 03:55:16] 2025-12-09 11:54:44,399 | INFO     | did not find any defunct processes belonging to 2805579
[2025-12-09 03:55:16] 2025-12-09 11:54:44,414 | INFO     | did not find any defunct processes belonging to 2805579
[2025-12-09 03:55:16] 2025-12-09 11:54:44,418 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-09 03:55:16] 2025-12-09 11:54:44,418 | INFO     | ready for new job
[2025-12-09 03:55:16] 2025-12-09 11:54:44,418 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-09 03:55:16] 2025-12-09 11:54:44,427 | INFO     | ***************************************
[2025-12-09 03:55:16] 2025-12-09 11:54:44,430 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-09 03:55:16] 2025-12-09 11:54:44,431 | INFO     | ***************************************
[2025-12-09 03:55:16] 2025-12-09 11:54:44,431 | INFO     | 
[2025-12-09 03:55:16] 2025-12-09 11:54:44,432 | INFO     | architecture information:
[2025-12-09 03:55:16] 2025-12-09 11:54:44,436 | INFO     | executing command: cat /etc/os-release
[2025-12-09 03:55:16] 2025-12-09 11:54:44,471 | INFO     | cat /etc/os-release:
[2025-12-09 03:55:16] NAME="CentOS Linux"
[2025-12-09 03:55:16] VERSION="7 (Core)"
[2025-12-09 03:55:16] ID="centos"
[2025-12-09 03:55:16] ID_LIKE="rhel fedora"
[2025-12-09 03:55:16] VERSION_ID="7"
[2025-12-09 03:55:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-09 03:55:16] ANSI_COLOR="0;31"
[2025-12-09 03:55:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-09 03:55:16] HOME_URL="https://www.centos.org/"
[2025-12-09 03:55:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-09 03:55:16] 
[2025-12-09 03:55:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-09 03:55:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-09 03:55:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-09 03:55:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-09 03:55:16] 
[2025-12-09 03:55:16] 2025-12-09 11:54:44,471 | INFO     | ***************************************
[2025-12-09 03:55:16] 2025-12-09 11:54:44,974 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc241/slots/3
[2025-12-09 03:55:16] 2025-12-09 11:54:45,035 | INFO     | sufficient remaining disk space (77959528448 B)
[2025-12-09 03:55:16] 2025-12-09 11:54:45,036 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-09 03:55:16] 2025-12-09 11:54:45,036 | INFO     | current server update state: UPDATING_FINAL
[2025-12-09 03:55:16] 2025-12-09 11:54:45,036 | INFO     | update_server=False
[2025-12-09 03:55:16] 2025-12-09 11:54:45,036 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-09 03:55:16] 2025-12-09 11:54:45,036 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-09 03:55:16] 2025-12-09 11:54:45,303 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-09 03:55:16] 2025-12-09 11:54:45,304 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-09 03:55:16] 2025-12-09 11:54:45,304 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-09 03:55:16] 2025-12-09 11:54:45,304 | INFO     | will abort loop
[2025-12-09 03:55:16] 2025-12-09 11:54:45,404 | INFO     | all payload control threads have been joined
[2025-12-09 03:55:16] 2025-12-09 11:54:45,595 | INFO     | all data control threads have been joined
[2025-12-09 03:55:16] 2025-12-09 11:54:45,656 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-09 03:55:16] 2025-12-09 11:54:46,041 | INFO     | [job] retrieve thread has finished
[2025-12-09 03:55:16] 2025-12-09 11:54:46,048 | INFO     | [payload] validate_post thread has finished
[2025-12-09 03:55:16] 2025-12-09 11:54:46,311 | INFO     | [job] job monitor thread has finished
[2025-12-09 03:55:16] 2025-12-09 11:54:46,410 | INFO     | [payload] control thread has finished
[2025-12-09 03:55:16] 2025-12-09 11:54:46,461 | INFO     | [payload] failed_post thread has finished
[2025-12-09 03:55:16] 2025-12-09 11:54:46,480 | INFO     | [job] validate thread has finished
[2025-12-09 03:55:16] 2025-12-09 11:54:46,498 | INFO     | all job control threads have been joined
[2025-12-09 03:55:16] 2025-12-09 11:54:46,601 | INFO     | [data] control thread has finished
[2025-12-09 03:55:16] 2025-12-09 11:54:46,965 | INFO     | [data] copytool_in thread has finished
[2025-12-09 03:55:16] 2025-12-09 11:54:46,999 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-09 03:55:16] 2025-12-09 11:54:47,349 | INFO     | [payload] execute_payloads thread has finished
[2025-12-09 03:55:16] 2025-12-09 11:54:47,413 | INFO     | [job] create_data_payload thread has finished
[2025-12-09 03:55:16] 2025-12-09 11:54:47,413 | INFO     | [payload] validate_pre thread has finished
[2025-12-09 03:55:16] 2025-12-09 11:54:47,504 | INFO     | [job] control thread has finished
[2025-12-09 03:55:16] 2025-12-09 11:54:47,661 | INFO     | [data] copytool_out thread has finished
[2025-12-09 03:55:16] 2025-12-09 11:54:47,706 | INFO     | [monitor] cgroup control has ended
[2025-12-09 03:55:16] 2025-12-09 11:54:47,745 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-09 03:55:16] 2025-12-09 11:54:48,751 | INFO     | [job] queue monitor thread has finished
[2025-12-09 03:55:16] 2025-12-09 11:54:49,042 | INFO     | [data] queue_monitor thread has finished
[2025-12-09 03:55:16] 2025-12-09 11:54:49,306 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135863822391104)>', '<ExcThread(monitor, started 135863472207616)>']
[2025-12-09 03:55:16] 2025-12-09 11:54:54,330 | INFO     | all workflow threads have been joined
[2025-12-09 03:55:16] 2025-12-09 11:54:54,331 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-09 03:55:16] 2025-12-09 11:54:54,331 | INFO     | traces error code: 0
[2025-12-09 03:55:16] 2025-12-09 11:54:54,331 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-09 03:55:16] 2025-12-09 11:55:16,006 | INFO     | PID=2795375 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-09 03:55:16] 2025-12-09 11:55:16,006 | INFO     | .. there are 7 such processes running
[2025-12-09 03:55:16] 2025-12-09 11:55:16,006 | INFO     | found 0 job(s) in 20 queues
[2025-12-09 03:55:16] 2025-12-09 11:55:16,006 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-09 03:55:16] 2025-12-09 11:55:16,006 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-09 03:55:16] 2025-12-09 11:55:16,007 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-09 03:55:16] 2025-12-09 11:55:16,007 | INFO     | [monitor] control thread has ended
[2025-12-09 03:55:16] 2025-12-09 11:55:16,266 [wrapper] ==== pilot stdout END ====
[2025-12-09 03:55:16] 2025-12-09 11:55:16,272 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-09 03:55:16] 2025-12-09 11:55:16,280 [wrapper] pilotpid: 2795375
[2025-12-09 03:55:16] 2025-12-09 11:55:16,288 [wrapper] Pilot exit status: 0
[2025-12-09 03:55:16] 2025-12-09 11:55:16,313 [wrapper] pandaids: 6895356047
[2025-12-09 03:55:16] 2025-12-09 11:55:16,453 [wrapper] cleanup supervisor_pilot 4032783 2795376
[2025-12-09 03:55:16] 2025-12-09 11:55:16,458 [wrapper] Test setup, not cleaning
[2025-12-09 03:55:16] 2025-12-09 11:55:16,465 [wrapper] apfmon messages muted
[2025-12-09 03:55:16] 2025-12-09 11:55:16,471 [wrapper] ==== wrapper stdout END ====
[2025-12-09 03:55:16] 2025-12-09 11:55:16,477 [wrapper] ==== wrapper stderr END ====
[2025-12-09 03:55:16]  *** Error codes and diagnostics ***
[2025-12-09 03:55:16]     "exeErrorCode": 0,
[2025-12-09 03:55:16]     "exeErrorDiag": "",
[2025-12-09 03:55:16]     "pilotErrorCode": 0,
[2025-12-09 03:55:16]     "pilotErrorDiag": "",
[2025-12-09 03:55:16]  *** Listing of results directory ***
[2025-12-09 03:55:16] total 1318112
[2025-12-09 03:55:16] -rw-r--r-- 1 root root    576529 Nov 23 02:16 pilot3.tar.gz
[2025-12-09 03:55:16] -rwx------ 1 4871 1028     36292 Nov 23 02:18 runpilot2-wrapper.sh
[2025-12-09 03:55:16] -rw-r--r-- 1 root root      5112 Nov 23 02:18 queuedata.json
[2025-12-09 03:55:16] -rw-r--r-- 1 root root       100 Dec  8 07:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-09 03:55:16] -rwxr-xr-x 1 root root      7986 Dec  8 07:33 run_atlas
[2025-12-09 03:55:16] -rw-r--r-- 1 root root       105 Dec  8 07:33 job.xml
[2025-12-09 03:55:16] -rw-r--r-- 2 root root 408521806 Dec  8 07:33 EVNT.47483658._000687.pool.root.1
[2025-12-09 03:55:16] drwxrwx--x 2 root root      4096 Dec  8 07:33 shared
[2025-12-09 03:55:16] -rw-r--r-- 2 root root    590095 Dec  8 07:33 input.tar.gz
[2025-12-09 03:55:16] -rw-r--r-- 2 root root     15847 Dec  8 07:33 start_atlas.sh
[2025-12-09 03:55:16] -rw-r--r-- 1 root root         0 Dec  8 07:33 boinc_setup_complete
[2025-12-09 03:55:16] -rw-r--r-- 1 root root      9236 Dec  8 07:33 init_data.xml
[2025-12-09 03:55:16] -rw-r--r-- 1 root root         0 Dec  8 07:33 boinc_lockfile
[2025-12-09 03:55:16] -rw-r--r-- 1 root root      2786 Dec  8 07:33 pandaJob.out
[2025-12-09 03:55:16] -rw------- 1 root root    985713 Dec  8 07:33 agis_schedconf.cvmfs.json
[2025-12-09 03:55:16] drwxr-xr-x 5  320  320      4096 Dec  8 07:33 pilot3
[2025-12-09 03:55:16] -rw-r--r-- 1 root root       533 Dec  9 03:41 boinc_task_state.xml
[2025-12-09 03:55:16] -rw------- 1 root root 912142035 Dec  9 03:53 HITS.47556137._006830.pool.root.1
[2025-12-09 03:55:16] -rw------- 1 root root      1036 Dec  9 03:54 memory_monitor_summary.json
[2025-12-09 03:55:16] -rw------- 1 root root        95 Dec  9 03:54 pilot_heartbeat.json
[2025-12-09 03:55:16] -rw------- 1 root root   1516240 Dec  9 03:54 agis_ddmendpoints.agis.ALL.json
[2025-12-09 03:55:16] -rw------- 1 root root   2550012 Dec  9 03:54 log.47556137._006830.job.log.tgz.1
[2025-12-09 03:55:16] -rw------- 1 root root      8570 Dec  9 03:54 heartbeat.json
[2025-12-09 03:55:16] -rw-r--r-- 1 root root        29 Dec  9 03:55 wrapper_checkpoint.txt
[2025-12-09 03:55:16] -rw-r--r-- 1 root root      8192 Dec  9 03:55 boinc_mmap_file
[2025-12-09 03:55:16] -rw------- 1 root root       822 Dec  9 03:55 pilotlog.txt
[2025-12-09 03:55:16] -rw------- 1 root root  10037783 Dec  9 03:55 log.47556137._006830.job.log.1
[2025-12-09 03:55:16] -rw------- 1 root root       353 Dec  9 03:55 output.list
[2025-12-09 03:55:16] -rw-r--r-- 1 root root       620 Dec  9 03:55 runtime_log
[2025-12-09 03:55:16] -rw------- 1 root root  12605440 Dec  9 03:55 result.tar.gz
[2025-12-09 03:55:16] -rw-r--r-- 1 root root      9021 Dec  9 03:55 runtime_log.err
[2025-12-09 03:55:16] -rw------- 1 root root       656 Dec  9 03:55 Lt1MDm6LMh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmEnKKDmTuPYLm.diag
[2025-12-09 03:55:16] -rw-r--r-- 1 root root     21438 Dec  9 03:55 stderr.txt
[2025-12-09 03:55:16] HITS file was successfully produced:
[2025-12-09 03:55:16] -rw------- 1 root root 912142035 Dec  9 03:53 shared/HITS.pool.root.1
[2025-12-09 03:55:16]  *** Contents of shared directory: ***
[2025-12-09 03:55:16] total 1302628
[2025-12-09 03:55:16] -rw-r--r-- 2 root root 408521806 Dec  8 07:33 ATLAS.root_0
[2025-12-09 03:55:16] -rw-r--r-- 2 root root    590095 Dec  8 07:33 input.tar.gz
[2025-12-09 03:55:16] -rw-r--r-- 2 root root     15847 Dec  8 07:33 start_atlas.sh
[2025-12-09 03:55:16] -rw------- 1 root root 912142035 Dec  9 03:53 HITS.pool.root.1
[2025-12-09 03:55:16] -rw------- 1 root root  12605440 Dec  9 03:55 result.tar.gz
03:55:18 (2791475): run_atlas exited; CPU time 206153.328818
03:55:18 (2791475): called boinc_finish(0)

</stderr_txt>
]]>

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