Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
19:21:11 (1954008): wrapper (7.7.26015): starting
19:21:11 (1954008): wrapper: running run_atlas (--nthreads 10)
[2025-12-07 19:21:11] Arguments: --nthreads 10
[2025-12-07 19:21:11] Threads: 10
[2025-12-07 19:21:11] Checking for CVMFS
[2025-12-07 19:21:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-07 19:21:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-07 19:21:12] Running cvmfs_config stat atlas.cern.ch
[2025-12-07 19:21:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-07 19:21:13] 2.13.3.0 8606 9221 63496 153751 2 76 3534782 4096000 10845 130560 0 30023494 99.972 1003049 676 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-12-07 19:21:13] CVMFS is ok
[2025-12-07 19:21:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-07 19:21:13] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-07 19:21:13] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-07 19:21:13] Further information can be found at the LHC@home message board.
[2025-12-07 19:21:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-07 19:21:13] Checking for apptainer binary...
[2025-12-07 19:21:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-07 19:21:13] Running /usr/bin/apptainer --version
[2025-12-07 19:21:13] apptainer version 1.4.2
[2025-12-07 19:21:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-07 19:21:13] 3950x-linux
[2025-12-07 19:21:13] apptainer works
[2025-12-07 19:21:13] Set ATHENA_PROC_NUMBER=10
[2025-12-07 19:21:13] Set ATHENA_CORE_NUMBER=10
[2025-12-07 19:21:14] Starting ATLAS job with PandaID=6895379018
[2025-12-07 19:21:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc242/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-08 16:35:07]  *** The last 200 lines of the pilot log: ***
[2025-12-08 16:35:07] 2025-12-09 00:33:56,380 | INFO     | .. there are 12 such processes running
[2025-12-08 16:35:07] 2025-12-09 00:33:56,418 | INFO     | sum of deviations: 2896941284116.763
[2025-12-08 16:35:07] 2025-12-09 00:33:56,418 | INFO     | mean x: 1765202292.6912
[2025-12-08 16:35:07] 2025-12-09 00:33:56,419 | INFO     | mean y: 3140029.6056
[2025-12-08 16:35:07] 2025-12-09 00:33:56,419 | INFO     | intersect: -8440428561.506929
[2025-12-08 16:35:07] 2025-12-09 00:33:56,420 | INFO     | chi2: 13.025733250154564
[2025-12-08 16:35:07] 2025-12-09 00:33:56,427 | INFO     | sum of square deviations: 598393731630.1797
[2025-12-08 16:35:07] 2025-12-09 00:33:56,501 | INFO     | sum of deviations: 3366386504100.9624
[2025-12-08 16:35:07] 2025-12-09 00:33:56,501 | INFO     | mean x: 1765202140.204016
[2025-12-08 16:35:07] 2025-12-09 00:33:56,501 | INFO     | mean y: 3149919.0080321287
[2025-12-08 16:35:07] 2025-12-09 00:33:56,501 | INFO     | intersect: -9927356280.654898
[2025-12-08 16:35:07] 2025-12-09 00:33:56,502 | INFO     | chi2: 9.690517520928866
[2025-12-08 16:35:07] 2025-12-09 00:33:56,502 | INFO     | current chi2=9.690517520928866 (change=25.60482135764697 %)
[2025-12-08 16:35:07] 2025-12-09 00:33:56,513 | INFO     | sum of square deviations: 591214311263.6432
[2025-12-08 16:35:07] 2025-12-09 00:33:56,602 | INFO     | sum of deviations: 3830866755643.778
[2025-12-08 16:35:07] 2025-12-09 00:33:56,602 | INFO     | mean x: 1765201987.7169354
[2025-12-08 16:35:07] 2025-12-09 00:33:56,602 | INFO     | mean y: 3159785.415322581
[2025-12-08 16:35:07] 2025-12-09 00:33:56,602 | INFO     | intersect: -11434746034.705458
[2025-12-08 16:35:07] 2025-12-09 00:33:56,609 | INFO     | chi2: 6.49742618275713
[2025-12-08 16:35:07] 2025-12-09 00:33:56,613 | INFO     | current chi2=6.49742618275713 (change=32.95067916935842 %)
[2025-12-08 16:35:07] 2025-12-09 00:33:56,614 | INFO     | sum of square deviations: 584092491006.1504
[2025-12-08 16:35:07] 2025-12-09 00:33:56,715 | INFO     | sum of deviations: 4094123897081.582
[2025-12-08 16:35:07] 2025-12-09 00:33:56,715 | INFO     | mean x: 1765201835.2291498
[2025-12-08 16:35:07] 2025-12-09 00:33:56,715 | INFO     | mean y: 3165421.672874494
[2025-12-08 16:35:07] 2025-12-09 00:33:56,715 | INFO     | intersect: -12369797984.06252
[2025-12-08 16:35:07] 2025-12-09 00:33:56,716 | INFO     | chi2: 5.335833374381175
[2025-12-08 16:35:07] 2025-12-09 00:33:56,716 | INFO     | current chi2=5.335833374381175 (change=17.877737671858284 %)
[2025-12-08 16:35:07] 2025-12-09 00:33:56,717 | INFO     | right removable region: 1234
[2025-12-08 16:35:07] 2025-12-09 00:33:56,724 | INFO     | sum of square deviations: 598391298340.1791
[2025-12-08 16:35:07] 2025-12-09 00:33:56,739 | INFO     | monitor loop #4986: job 0:6895379018 is in state 'finished'
[2025-12-08 16:35:07] 2025-12-09 00:33:56,739 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-08 16:35:07] 2025-12-09 00:33:56,822 | INFO     | sum of deviations: 2395790051395.07
[2025-12-08 16:35:07] 2025-12-09 00:33:56,822 | INFO     | mean x: 1765202445.204016
[2025-12-08 16:35:07] 2025-12-09 00:33:56,822 | INFO     | mean y: 3150584.066666667
[2025-12-08 16:35:07] 2025-12-09 00:33:56,829 | INFO     | intersect: -7064222335.039286
[2025-12-08 16:35:07] 2025-12-09 00:33:56,830 | INFO     | chi2: 9.57172039158929
[2025-12-08 16:35:07] 2025-12-09 00:33:56,830 | INFO     | current chi2=9.57172039158929 (change=26.516840105905658 %)
[2025-12-08 16:35:07] 2025-12-09 00:33:56,831 | INFO     | sum of square deviations: 591209747497.3673
[2025-12-08 16:35:07] 2025-12-09 00:33:56,948 | INFO     | sum of deviations: 2105591024199.4944
[2025-12-08 16:35:07] 2025-12-09 00:33:56,948 | INFO     | mean x: 1765202597.7137096
[2025-12-08 16:35:07] 2025-12-09 00:33:56,948 | INFO     | mean y: 3156743.2887096773
[2025-12-08 16:35:07] 2025-12-09 00:33:56,948 | INFO     | intersect: -6283604869.443613
[2025-12-08 16:35:07] 2025-12-09 00:33:56,958 | INFO     | chi2: 8.439311256674976
[2025-12-08 16:35:07] 2025-12-09 00:33:56,959 | INFO     | current chi2=8.439311256674976 (change=11.830779510748831 %)
[2025-12-08 16:35:07] 2025-12-09 00:33:56,959 | INFO     | left removable region: 20
[2025-12-08 16:35:07] 2025-12-09 00:33:56,960 | INFO     | sum of square deviations: 554799061901.8749
[2025-12-08 16:35:07] 2025-12-09 00:33:57,086 | INFO     | sum of deviations: 3145378868325.3965
[2025-12-08 16:35:07] 2025-12-09 00:33:57,090 | INFO     | mean x: 1765202414.7495883
[2025-12-08 16:35:07] 2025-12-09 00:33:57,090 | INFO     | mean y: 3187463.2907742998
[2025-12-08 16:35:07] 2025-12-09 00:33:57,090 | INFO     | intersect: -10004454501.057606
[2025-12-08 16:35:07] 2025-12-09 00:33:57,091 | INFO     | chi2: 0.4709005542272746
[2025-12-08 16:35:07] 2025-12-09 00:33:57,091 | INFO     | current memory leak: 5.67 B/s (using 1214 data points, chi2=0.47)
[2025-12-08 16:35:07] 2025-12-09 00:33:57,092 | INFO     | could have reported an average CPU frequency of 3400 MHz (45 samples)
[2025-12-08 16:35:07] 2025-12-09 00:33:57,092 | INFO     | ..............................
[2025-12-08 16:35:07] 2025-12-09 00:33:57,092 | INFO     | . Timing measurements:
[2025-12-08 16:35:07] 2025-12-09 00:33:57,092 | INFO     | . get job = 0 s
[2025-12-08 16:35:07] 2025-12-09 00:33:57,102 | INFO     | . initial setup = 5 s
[2025-12-08 16:35:07] 2025-12-09 00:33:57,102 | INFO     | . payload setup = 23 s
[2025-12-08 16:35:07] 2025-12-09 00:33:57,102 | INFO     | . stage-in = 0 s
[2025-12-08 16:35:07] 2025-12-09 00:33:57,102 | INFO     | . payload execution = 76226 s
[2025-12-08 16:35:07] 2025-12-09 00:33:57,102 | INFO     | . stage-out = 8 s
[2025-12-08 16:35:07] 2025-12-09 00:33:57,102 | INFO     | . log creation = 2 s
[2025-12-08 16:35:07] 2025-12-09 00:33:57,102 | INFO     | ..............................
[2025-12-08 16:35:07] 2025-12-09 00:33:57,397 | INFO     | time since job start (76325s) is within the limit (172800.0s)
[2025-12-08 16:35:07] 2025-12-09 00:33:57,887 | INFO     | 
[2025-12-08 16:35:07] 2025-12-09 00:33:57,887 | INFO     | job summary report
[2025-12-08 16:35:07] 2025-12-09 00:33:57,887 | INFO     | --------------------------------------------------
[2025-12-08 16:35:07] 2025-12-09 00:33:57,887 | INFO     | PanDA job id: 6895379018
[2025-12-08 16:35:07] 2025-12-09 00:33:57,887 | INFO     | task id: 47556137
[2025-12-08 16:35:07] 2025-12-09 00:33:57,887 | INFO     | errors: (none)
[2025-12-08 16:35:07] 2025-12-09 00:33:57,887 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-08 16:35:07] 2025-12-09 00:33:57,887 | INFO     | pilot state: finished 
[2025-12-08 16:35:07] 2025-12-09 00:33:57,887 | INFO     | transexitcode: 0
[2025-12-08 16:35:07] 2025-12-09 00:33:57,887 | INFO     | exeerrorcode: 0
[2025-12-08 16:35:07] 2025-12-09 00:33:57,887 | INFO     | exeerrordiag: 
[2025-12-08 16:35:07] 2025-12-09 00:33:57,887 | INFO     | exitcode: 0
[2025-12-08 16:35:07] 2025-12-09 00:33:57,888 | INFO     | exitmsg: OK
[2025-12-08 16:35:07] 2025-12-09 00:33:57,888 | INFO     | cpuconsumptiontime: 208317 s
[2025-12-08 16:35:07] 2025-12-09 00:33:57,888 | INFO     | nevents: 1000
[2025-12-08 16:35:07] 2025-12-09 00:33:57,888 | INFO     | neventsw: 0
[2025-12-08 16:35:07] 2025-12-09 00:33:57,888 | INFO     | pid: 1964699
[2025-12-08 16:35:07] 2025-12-09 00:33:57,888 | INFO     | pgrp: 1964699
[2025-12-08 16:35:07] 2025-12-09 00:33:57,888 | INFO     | corecount: 10
[2025-12-08 16:35:07] 2025-12-09 00:33:57,888 | INFO     | event service: False
[2025-12-08 16:35:07] 2025-12-09 00:33:57,888 | INFO     | sizes: {0: 2284101, 1: 2284185, 2: 2284356, 13: 2284384, 20: 2284702, 23: 2284730, 76253: 2347745, 76254: 2347744, 76264: 2356878, 76284: 2357068}
[2025-12-08 16:35:07] 2025-12-09 00:33:57,888 | INFO     | --------------------------------------------------
[2025-12-08 16:35:07] 2025-12-09 00:33:57,888 | INFO     | 
[2025-12-08 16:35:07] 2025-12-09 00:33:57,888 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc242/slots/1
[2025-12-08 16:35:07] 2025-12-09 00:33:57,952 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-08 16:35:07] 2025-12-09 00:33:57,952 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-08 16:35:07] 2025-12-09 00:33:57,952 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-08 16:35:07] 2025-12-09 00:33:57,952 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-08 16:35:07] 2025-12-09 00:33:57,952 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-08 16:35:07] 2025-12-09 00:33:57,953 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-08 16:35:07] 2025-12-09 00:33:57,953 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-08 16:35:07] 2025-12-09 00:33:57,953 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-08 16:35:07] 2025-12-09 00:33:57,953 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-08 16:35:07] 2025-12-09 00:33:57,953 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-08 16:35:07] 2025-12-09 00:33:57,953 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-08 16:35:07] 2025-12-09 00:33:57,953 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-08 16:35:07] 2025-12-09 00:33:57,953 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-08 16:35:07] 2025-12-09 00:33:57,953 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-08 16:35:07] 2025-12-09 00:33:57,953 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-08 16:35:07] 2025-12-09 00:33:57,953 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-08 16:35:07] 2025-12-09 00:33:57,953 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-08 16:35:07] 2025-12-09 00:33:57,953 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-08 16:35:07] 2025-12-09 00:33:57,953 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-08 16:35:07] 2025-12-09 00:33:57,954 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-08 16:35:07] 2025-12-09 00:33:57,954 | INFO     | job 6895379018 has completed (purged errors)
[2025-12-08 16:35:07] 2025-12-09 00:33:57,954 | INFO     | overall cleanup function is called
[2025-12-08 16:35:07] 2025-12-09 00:33:59,038 | INFO     | --- collectZombieJob: --- 10, [1964699]
[2025-12-08 16:35:07] 2025-12-09 00:33:59,039 | INFO     | zombie collector waiting for pid 1964699
[2025-12-08 16:35:07] 2025-12-09 00:33:59,039 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-08 16:35:07] 2025-12-09 00:33:59,039 | INFO     | collected zombie processes
[2025-12-08 16:35:07] 2025-12-09 00:33:59,039 | INFO     | will attempt to kill all subprocesses of pid=1964699
[2025-12-08 16:35:07] 2025-12-09 00:34:00,009 | INFO     | process IDs to be killed: [1964699] (in reverse order)
[2025-12-08 16:35:07] 2025-12-09 00:34:00,296 | WARNING  | found no corresponding commands to process id(s)
[2025-12-08 16:35:07] 2025-12-09 00:34:00,296 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-08 16:35:07] 2025-12-09 00:34:00,328 | INFO     | did not find any defunct processes belonging to 1964699
[2025-12-08 16:35:07] 2025-12-09 00:34:00,360 | INFO     | did not find any defunct processes belonging to 1964699
[2025-12-08 16:35:07] 2025-12-09 00:34:00,371 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-08 16:35:07] 2025-12-09 00:34:00,371 | INFO     | ready for new job
[2025-12-08 16:35:07] 2025-12-09 00:34:00,371 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-08 16:35:07] 2025-12-09 00:34:00,396 | INFO     | ***************************************
[2025-12-08 16:35:07] 2025-12-09 00:34:00,396 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-08 16:35:07] 2025-12-09 00:34:00,396 | INFO     | ***************************************
[2025-12-08 16:35:07] 2025-12-09 00:34:00,396 | INFO     | 
[2025-12-08 16:35:07] 2025-12-09 00:34:00,410 | INFO     | architecture information:
[2025-12-08 16:35:07] 2025-12-09 00:34:00,411 | INFO     | executing command: cat /etc/os-release
[2025-12-08 16:35:07] 2025-12-09 00:34:00,474 | INFO     | cat /etc/os-release:
[2025-12-08 16:35:07] NAME="CentOS Linux"
[2025-12-08 16:35:07] VERSION="7 (Core)"
[2025-12-08 16:35:07] ID="centos"
[2025-12-08 16:35:07] ID_LIKE="rhel fedora"
[2025-12-08 16:35:07] VERSION_ID="7"
[2025-12-08 16:35:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-08 16:35:07] ANSI_COLOR="0;31"
[2025-12-08 16:35:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-08 16:35:07] HOME_URL="https://www.centos.org/"
[2025-12-08 16:35:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-08 16:35:07] 
[2025-12-08 16:35:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-08 16:35:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-08 16:35:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-08 16:35:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-08 16:35:07] 
[2025-12-08 16:35:07] 2025-12-09 00:34:00,474 | INFO     | ***************************************
[2025-12-08 16:35:07] 2025-12-09 00:34:00,980 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc242/slots/1
[2025-12-08 16:35:07] 2025-12-09 00:34:01,037 | INFO     | sufficient remaining disk space (70163365888 B)
[2025-12-08 16:35:07] 2025-12-09 00:34:01,038 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-08 16:35:07] 2025-12-09 00:34:01,038 | INFO     | current server update state: UPDATING_FINAL
[2025-12-08 16:35:07] 2025-12-09 00:34:01,038 | INFO     | update_server=False
[2025-12-08 16:35:07] 2025-12-09 00:34:01,038 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-08 16:35:07] 2025-12-09 00:34:01,038 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-08 16:35:07] 2025-12-09 00:34:01,038 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-08 16:35:07] 2025-12-09 00:34:01,038 | INFO     | aborting loop
[2025-12-08 16:35:07] 2025-12-09 00:34:01,418 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-08 16:35:07] 2025-12-09 00:34:01,939 | INFO     | all payload control threads have been joined
[2025-12-08 16:35:07] 2025-12-09 00:34:02,013 | INFO     | all job control threads have been joined
[2025-12-08 16:35:07] 2025-12-09 00:34:02,044 | INFO     | [job] job monitor thread has finished
[2025-12-08 16:35:07] 2025-12-09 00:34:02,044 | INFO     | [job] retrieve thread has finished
[2025-12-08 16:35:07] 2025-12-09 00:34:02,143 | INFO     | all data control threads have been joined
[2025-12-08 16:35:07] 2025-12-09 00:34:02,343 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-08 16:35:07] 2025-12-09 00:34:02,439 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-08 16:35:07] 2025-12-09 00:34:02,497 | INFO     | [job] create_data_payload thread has finished
[2025-12-08 16:35:07] 2025-12-09 00:34:02,720 | INFO     | [payload] execute_payloads thread has finished
[2025-12-08 16:35:07] 2025-12-09 00:34:02,720 | INFO     | [data] copytool_in thread has finished
[2025-12-08 16:35:07] 2025-12-09 00:34:02,720 | INFO     | [job] validate thread has finished
[2025-12-08 16:35:07] 2025-12-09 00:34:02,896 | INFO     | [payload] validate_pre thread has finished
[2025-12-08 16:35:07] 2025-12-09 00:34:02,945 | INFO     | [payload] control thread has finished
[2025-12-08 16:35:07] 2025-12-09 00:34:03,019 | INFO     | [job] control thread has finished
[2025-12-08 16:35:07] 2025-12-09 00:34:03,044 | INFO     | [data] copytool_out thread has finished
[2025-12-08 16:35:07] 2025-12-09 00:34:03,149 | INFO     | [data] control thread has finished
[2025-12-08 16:35:07] 2025-12-09 00:34:03,444 | INFO     | [job] queue monitor thread has finished
[2025-12-08 16:35:07] 2025-12-09 00:34:03,631 | INFO     | [payload] validate_post thread has finished
[2025-12-08 16:35:07] 2025-12-09 00:34:03,631 | INFO     | [payload] failed_post thread has finished
[2025-12-08 16:35:07] 2025-12-09 00:34:05,427 | INFO     | [data] queue_monitor thread has finished
[2025-12-08 16:35:07] 2025-12-09 00:34:31,558 | INFO     | PID=1957916 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-08 16:35:07] 2025-12-09 00:34:31,558 | INFO     | .. there are 12 such processes running
[2025-12-08 16:35:07] 2025-12-09 00:34:31,568 | INFO     | found 0 job(s) in 20 queues
[2025-12-08 16:35:07] 2025-12-09 00:34:31,568 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-08 16:35:07] 2025-12-09 00:34:31,568 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-08 16:35:07] 2025-12-09 00:34:59,712 | INFO     | [monitor] cgroup control has ended
[2025-12-08 16:35:07] 2025-12-09 00:35:01,509 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124896376809280)>', '<ExcThread(monitor, started 124895895742208)>']
[2025-12-08 16:35:07] 2025-12-09 00:35:01,733 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-08 16:35:07] 2025-12-09 00:35:01,734 | INFO     | [monitor] control thread has ended
[2025-12-08 16:35:07] 2025-12-09 00:35:06,533 | INFO     | all workflow threads have been joined
[2025-12-08 16:35:07] 2025-12-09 00:35:06,534 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-08 16:35:07] 2025-12-09 00:35:06,534 | INFO     | traces error code: 0
[2025-12-08 16:35:07] 2025-12-09 00:35:06,534 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-08 16:35:07] 2025-12-09 00:35:07,017 [wrapper] ==== pilot stdout END ====
[2025-12-08 16:35:07] 2025-12-09 00:35:07,037 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-08 16:35:07] 2025-12-09 00:35:07,049 [wrapper] pilotpid: 1957916
[2025-12-08 16:35:07] 2025-12-09 00:35:07,068 [wrapper] Pilot exit status: 0
[2025-12-08 16:35:07] 2025-12-09 00:35:07,105 [wrapper] pandaids: 6895379018
[2025-12-08 16:35:07] 2025-12-09 00:35:07,308 [wrapper] cleanup supervisor_pilot 3345889 1957917
[2025-12-08 16:35:07] 2025-12-09 00:35:07,319 [wrapper] Test setup, not cleaning
[2025-12-08 16:35:07] 2025-12-09 00:35:07,339 [wrapper] apfmon messages muted
[2025-12-08 16:35:07] 2025-12-09 00:35:07,356 [wrapper] ==== wrapper stdout END ====
[2025-12-08 16:35:07] 2025-12-09 00:35:07,369 [wrapper] ==== wrapper stderr END ====
[2025-12-08 16:35:07]  *** Error codes and diagnostics ***
[2025-12-08 16:35:07]     "exeErrorCode": 0,
[2025-12-08 16:35:07]     "exeErrorDiag": "",
[2025-12-08 16:35:07]     "pilotErrorCode": 0,
[2025-12-08 16:35:07]     "pilotErrorDiag": "",
[2025-12-08 16:35:07]  *** Listing of results directory ***
[2025-12-08 16:35:07] total 1320096
[2025-12-08 16:35:07] -rw-r--r-- 1 root root    576529 Nov 23 18:04 pilot3.tar.gz
[2025-12-08 16:35:07] -rwx------ 1 4871 1028     36292 Nov 23 18:05 runpilot2-wrapper.sh
[2025-12-08 16:35:07] -rw-r--r-- 1 root root      5112 Nov 23 18:05 queuedata.json
[2025-12-08 16:35:07] -rw-r--r-- 1 root root       100 Dec  7 19:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-08 16:35:07] -rwxr-xr-x 1 root root      7986 Dec  7 19:21 run_atlas
[2025-12-08 16:35:07] -rw-r--r-- 1 root root       105 Dec  7 19:21 job.xml
[2025-12-08 16:35:07] -rw-r--r-- 2 root root 410042128 Dec  7 19:21 EVNT.47483658._000975.pool.root.1
[2025-12-08 16:35:07] drwxrwx--x 2 root root      4096 Dec  7 19:21 shared
[2025-12-08 16:35:07] -rw-r--r-- 2 root root    590098 Dec  7 19:21 input.tar.gz
[2025-12-08 16:35:07] -rw-r--r-- 2 root root     15847 Dec  7 19:21 start_atlas.sh
[2025-12-08 16:35:07] -rw-r--r-- 1 root root         0 Dec  7 19:21 boinc_setup_complete
[2025-12-08 16:35:07] -rw-r--r-- 1 root root         0 Dec  7 19:21 boinc_lockfile
[2025-12-08 16:35:07] -rw-r--r-- 1 root root      2785 Dec  7 19:21 pandaJob.out
[2025-12-08 16:35:07] -rw------- 1 root root    981501 Dec  7 19:21 agis_schedconf.cvmfs.json
[2025-12-08 16:35:07] drwxr-xr-x 5  320  320      4096 Dec  7 19:21 pilot3
[2025-12-08 16:35:07] -rw-r--r-- 1 root root      9237 Dec  8 03:31 init_data.xml
[2025-12-08 16:35:07] -rw-r--r-- 1 root root       533 Dec  8 16:09 boinc_task_state.xml
[2025-12-08 16:35:07] -rw------- 1 root root 911774373 Dec  8 16:32 HITS.47556137._009620.pool.root.1
[2025-12-08 16:35:07] -rw------- 1 root root      1036 Dec  8 16:33 memory_monitor_summary.json
[2025-12-08 16:35:07] -rw------- 1 root root   1516240 Dec  8 16:33 agis_ddmendpoints.agis.ALL.json
[2025-12-08 16:35:07] -rw------- 1 root root   2589452 Dec  8 16:33 log.47556137._009620.job.log.tgz.1
[2025-12-08 16:35:07] -rw------- 1 root root      8569 Dec  8 16:33 heartbeat.json
[2025-12-08 16:35:07] -rw------- 1 root root        95 Dec  8 16:34 pilot_heartbeat.json
[2025-12-08 16:35:07] -rw-r--r-- 1 root root      8192 Dec  8 16:35 boinc_mmap_file
[2025-12-08 16:35:07] -rw-r--r-- 1 root root        29 Dec  8 16:35 wrapper_checkpoint.txt
[2025-12-08 16:35:07] -rw------- 1 root root      4838 Dec  8 16:35 pilotlog.txt
[2025-12-08 16:35:07] -rw------- 1 root root  10432622 Dec  8 16:35 log.47556137._009620.job.log.1
[2025-12-08 16:35:07] -rw------- 1 root root       353 Dec  8 16:35 output.list
[2025-12-08 16:35:07] -rw-r--r-- 1 root root       620 Dec  8 16:35 runtime_log
[2025-12-08 16:35:07] -rw------- 1 root root  13045760 Dec  8 16:35 result.tar.gz
[2025-12-08 16:35:07] -rw-r--r-- 1 root root      9021 Dec  8 16:35 runtime_log.err
[2025-12-08 16:35:07] -rw------- 1 root root       656 Dec  8 16:35 BAFMDmv8ah8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmvKLKDmuWZTNn.diag
[2025-12-08 16:35:07] -rw-r--r-- 1 root root     21320 Dec  8 16:35 stderr.txt
[2025-12-08 16:35:07] HITS file was successfully produced:
[2025-12-08 16:35:07] -rw------- 1 root root 911774373 Dec  8 16:32 shared/HITS.pool.root.1
[2025-12-08 16:35:07]  *** Contents of shared directory: ***
[2025-12-08 16:35:07] total 1304184
[2025-12-08 16:35:07] -rw-r--r-- 2 root root 410042128 Dec  7 19:21 ATLAS.root_0
[2025-12-08 16:35:07] -rw-r--r-- 2 root root    590098 Dec  7 19:21 input.tar.gz
[2025-12-08 16:35:07] -rw-r--r-- 2 root root     15847 Dec  7 19:21 start_atlas.sh
[2025-12-08 16:35:07] -rw------- 1 root root 911774373 Dec  8 16:32 HITS.pool.root.1
[2025-12-08 16:35:07] -rw------- 1 root root  13045760 Dec  8 16:35 result.tar.gz
16:35:09 (1954008): run_atlas exited; CPU time 208620.334047
16:35:09 (1954008): called boinc_finish(0)

</stderr_txt>
]]>

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