Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
07:14:34 (3720759): wrapper (7.7.26015): starting
07:14:34 (3720759): wrapper: running run_atlas (--nthreads 10)
[2025-12-06 07:14:34] Arguments: --nthreads 10
[2025-12-06 07:14:34] Threads: 10
[2025-12-06 07:14:34] Checking for CVMFS
[2025-12-06 07:14:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-06 07:14:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-06 07:14:35] Running cvmfs_config stat atlas.cern.ch
[2025-12-06 07:14:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-06 07:14:36] 2.13.3.0 8606 7054 64632 153693 1 76 3153889 4096001 10845 130560 0 22978663 99.964 926156 693 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-12-06 07:14:36] CVMFS is ok
[2025-12-06 07:14:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-06 07:14:36] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-06 07:14:36] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-06 07:14:36] Further information can be found at the LHC@home message board.
[2025-12-06 07:14:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-06 07:14:36] Checking for apptainer binary...
[2025-12-06 07:14:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-06 07:14:36] Running /usr/bin/apptainer --version
[2025-12-06 07:14:36] apptainer version 1.4.2
[2025-12-06 07:14:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-06 07:14:36] 3950x-linux
[2025-12-06 07:14:36] apptainer works
[2025-12-06 07:14:36] Set ATHENA_PROC_NUMBER=10
[2025-12-06 07:14:36] Set ATHENA_CORE_NUMBER=10
[2025-12-06 07:14:36] Starting ATLAS job with PandaID=6895364669
[2025-12-06 07:14:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc241/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-07 05:11:33]  *** The last 200 lines of the pilot log: ***
[2025-12-07 05:11:33] 2025-12-07 13:10:48,007 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-07 05:11:33] 2025-12-07 13:10:48,013 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3400.1340937499995
[2025-12-07 05:11:33] 2025-12-07 13:10:48,016 | INFO     | time since job start (78935s) is within the limit (172800.0s)
[2025-12-07 05:11:33] 2025-12-07 13:10:48,022 | INFO     | using path: /var/lib/multiboinc/boinc241/slots/3/PanDA_Pilot-6895364669/memory_monitor_summary.json (trf name=prmon)
[2025-12-07 05:11:33] 2025-12-07 13:10:48,022 | INFO     | extracted standard info from prmon json
[2025-12-07 05:11:33] 2025-12-07 13:10:48,022 | INFO     | extracted standard memory fields from prmon json
[2025-12-07 05:11:33] 2025-12-07 13:10:48,022 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-07 05:11:33] 2025-12-07 13:10:48,038 | INFO     | fitting pss+swap vs Time
[2025-12-07 05:11:33] 2025-12-07 13:10:48,040 | INFO     | sum of square deviations: 670302054179.6351
[2025-12-07 05:11:33] 2025-12-07 13:10:48,071 | INFO     | sum of deviations: 2738742984116.423
[2025-12-07 05:11:33] 2025-12-07 13:10:48,071 | INFO     | mean x: 1765073603.5862336
[2025-12-07 05:11:33] 2025-12-07 13:10:48,071 | INFO     | mean y: 3128266.7540603247
[2025-12-07 05:11:33] 2025-12-07 13:10:48,071 | INFO     | intersect: -7208669635.591912
[2025-12-07 05:11:33] 2025-12-07 13:10:48,072 | INFO     | chi2: 14.00659022363609
[2025-12-07 05:11:33] 2025-12-07 13:10:48,073 | INFO     | sum of square deviations: 662557313860.0796
[2025-12-07 05:11:33] 2025-12-07 13:10:48,104 | INFO     | sum of deviations: 3253413614266.9814
[2025-12-07 05:11:33] 2025-12-07 13:10:48,104 | INFO     | mean x: 1765073451.1001554
[2025-12-07 05:11:33] 2025-12-07 13:10:48,104 | INFO     | mean y: 3138398.054347826
[2025-12-07 05:11:33] 2025-12-07 13:10:48,104 | INFO     | intersect: -8664057444.271177
[2025-12-07 05:11:33] 2025-12-07 13:10:48,105 | INFO     | chi2: 10.24765126190167
[2025-12-07 05:11:33] 2025-12-07 13:10:48,105 | INFO     | current chi2=10.24765126190167 (change=26.836931056862216 %)
[2025-12-07 05:11:33] 2025-12-07 13:10:48,107 | INFO     | sum of square deviations: 654872481640.023
[2025-12-07 05:11:33] 2025-12-07 13:10:48,140 | INFO     | sum of deviations: 3744409607886.7217
[2025-12-07 05:11:33] 2025-12-07 13:10:48,141 | INFO     | mean x: 1765073298.6141856
[2025-12-07 05:11:33] 2025-12-07 13:10:48,141 | INFO     | mean y: 3148141.36710834
[2025-12-07 05:11:33] 2025-12-07 13:10:48,141 | INFO     | intersect: -10089133338.232847
[2025-12-07 05:11:33] 2025-12-07 13:10:48,142 | INFO     | chi2: 6.885688661698537
[2025-12-07 05:11:33] 2025-12-07 13:10:48,142 | INFO     | current chi2=6.885688661698537 (change=32.80715272486009 %)
[2025-12-07 05:11:33] 2025-12-07 13:10:48,146 | INFO     | sum of square deviations: 647247012173.9686
[2025-12-07 05:11:33] 2025-12-07 13:10:48,207 | INFO     | sum of deviations: 4053211843841.75
[2025-12-07 05:11:33] 2025-12-07 13:10:48,208 | INFO     | mean x: 1765073146.1251955
[2025-12-07 05:11:33] 2025-12-07 13:10:48,208 | INFO     | mean y: 3154312.501564945
[2025-12-07 05:11:33] 2025-12-07 13:10:48,208 | INFO     | intersect: -11050145658.852703
[2025-12-07 05:11:33] 2025-12-07 13:10:48,209 | INFO     | chi2: 5.241844612076764
[2025-12-07 05:11:33] 2025-12-07 13:10:48,209 | INFO     | current chi2=5.241844612076764 (change=23.873342673269743 %)
[2025-12-07 05:11:33] 2025-12-07 13:10:48,209 | INFO     | right removable region: 1277
[2025-12-07 05:11:33] 2025-12-07 13:10:48,210 | INFO     | sum of square deviations: 662554485290.0797
[2025-12-07 05:11:33] 2025-12-07 13:10:48,231 | INFO     | monitor loop #5111: job 0:6895364669 is in state 'finished'
[2025-12-07 05:11:33] 2025-12-07 13:10:48,231 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-07 05:11:33] 2025-12-07 13:10:48,272 | INFO     | sum of deviations: 2234835939981.011
[2025-12-07 05:11:33] 2025-12-07 13:10:48,272 | INFO     | mean x: 1765073756.1001554
[2025-12-07 05:11:33] 2025-12-07 13:10:48,272 | INFO     | mean y: 3138183.441770186
[2025-12-07 05:11:33] 2025-12-07 13:10:48,273 | INFO     | intersect: -5950561254.760444
[2025-12-07 05:11:33] 2025-12-07 13:10:48,274 | INFO     | chi2: 10.722221351723908
[2025-12-07 05:11:33] 2025-12-07 13:10:48,274 | INFO     | current chi2=10.722221351723908 (change=23.44873962522168 %)
[2025-12-07 05:11:33] 2025-12-07 13:10:48,274 | INFO     | left removable region: 10
[2025-12-07 05:11:33] 2025-12-07 13:10:48,277 | INFO     | sum of square deviations: 630675234015.5016
[2025-12-07 05:11:33] 2025-12-07 13:10:48,340 | INFO     | sum of deviations: 3338383469103.916
[2025-12-07 05:11:33] 2025-12-07 13:10:48,340 | INFO     | mean x: 1765073420.6519337
[2025-12-07 05:11:33] 2025-12-07 13:10:48,340 | INFO     | mean y: 3170728.4238358326
[2025-12-07 05:11:33] 2025-12-07 13:10:48,340 | INFO     | intersect: -9339977078.002132
[2025-12-07 05:11:33] 2025-12-07 13:10:48,341 | INFO     | chi2: 0.7931235452211789
[2025-12-07 05:11:33] 2025-12-07 13:10:48,342 | INFO     | current memory leak: 5.29 B/s (using 1267 data points, chi2=0.79)
[2025-12-07 05:11:33] 2025-12-07 13:10:48,342 | INFO     | could have reported an average CPU frequency of 3400 MHz (47 samples)
[2025-12-07 05:11:33] 2025-12-07 13:10:48,346 | INFO     | ..............................
[2025-12-07 05:11:33] 2025-12-07 13:10:48,346 | INFO     | . Timing measurements:
[2025-12-07 05:11:33] 2025-12-07 13:10:48,346 | INFO     | . get job = 0 s
[2025-12-07 05:11:33] 2025-12-07 13:10:48,346 | INFO     | . initial setup = 4 s
[2025-12-07 05:11:33] 2025-12-07 13:10:48,346 | INFO     | . payload setup = 21 s
[2025-12-07 05:11:33] 2025-12-07 13:10:48,346 | INFO     | . stage-in = 0 s
[2025-12-07 05:11:33] 2025-12-07 13:10:48,346 | INFO     | . payload execution = 78836 s
[2025-12-07 05:11:33] 2025-12-07 13:10:48,346 | INFO     | . stage-out = 7 s
[2025-12-07 05:11:33] 2025-12-07 13:10:48,346 | INFO     | . log creation = 2 s
[2025-12-07 05:11:33] 2025-12-07 13:10:48,346 | INFO     | ..............................
[2025-12-07 05:11:33] 2025-12-07 13:10:48,725 | INFO     | 
[2025-12-07 05:11:33] 2025-12-07 13:10:48,726 | INFO     | job summary report
[2025-12-07 05:11:33] 2025-12-07 13:10:48,726 | INFO     | --------------------------------------------------
[2025-12-07 05:11:33] 2025-12-07 13:10:48,726 | INFO     | PanDA job id: 6895364669
[2025-12-07 05:11:33] 2025-12-07 13:10:48,726 | INFO     | task id: 47556137
[2025-12-07 05:11:33] 2025-12-07 13:10:48,726 | INFO     | errors: (none)
[2025-12-07 05:11:33] 2025-12-07 13:10:48,726 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-07 05:11:33] 2025-12-07 13:10:48,726 | INFO     | pilot state: finished 
[2025-12-07 05:11:33] 2025-12-07 13:10:48,726 | INFO     | transexitcode: 0
[2025-12-07 05:11:33] 2025-12-07 13:10:48,726 | INFO     | exeerrorcode: 0
[2025-12-07 05:11:33] 2025-12-07 13:10:48,726 | INFO     | exeerrordiag: 
[2025-12-07 05:11:33] 2025-12-07 13:10:48,726 | INFO     | exitcode: 0
[2025-12-07 05:11:33] 2025-12-07 13:10:48,726 | INFO     | exitmsg: OK
[2025-12-07 05:11:33] 2025-12-07 13:10:48,726 | INFO     | cpuconsumptiontime: 204928 s
[2025-12-07 05:11:33] 2025-12-07 13:10:48,726 | INFO     | nevents: 1000
[2025-12-07 05:11:33] 2025-12-07 13:10:48,727 | INFO     | neventsw: 0
[2025-12-07 05:11:33] 2025-12-07 13:10:48,727 | INFO     | pid: 3733523
[2025-12-07 05:11:33] 2025-12-07 13:10:48,727 | INFO     | pgrp: 3733523
[2025-12-07 05:11:33] 2025-12-07 13:10:48,727 | INFO     | corecount: 10
[2025-12-07 05:11:33] 2025-12-07 13:10:48,727 | INFO     | event service: False
[2025-12-07 05:11:33] 2025-12-07 13:10:48,727 | INFO     | sizes: {0: 2284051, 1: 2284135, 2: 2284306, 13: 2284334, 20: 2284652, 23: 2284680, 78863: 2348554, 78873: 2357576, 78875: 2357632, 78894: 2357878}
[2025-12-07 05:11:33] 2025-12-07 13:10:48,727 | INFO     | --------------------------------------------------
[2025-12-07 05:11:33] 2025-12-07 13:10:48,727 | INFO     | 
[2025-12-07 05:11:33] 2025-12-07 13:10:48,727 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc241/slots/3
[2025-12-07 05:11:33] 2025-12-07 13:10:48,798 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-07 05:11:33] 2025-12-07 13:10:48,799 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-07 05:11:33] 2025-12-07 13:10:48,799 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-07 05:11:33] 2025-12-07 13:10:48,799 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-07 05:11:33] 2025-12-07 13:10:48,799 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-07 05:11:33] 2025-12-07 13:10:48,799 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-07 05:11:33] 2025-12-07 13:10:48,799 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-07 05:11:33] 2025-12-07 13:10:48,799 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-07 05:11:33] 2025-12-07 13:10:48,799 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-07 05:11:33] 2025-12-07 13:10:48,799 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-07 05:11:33] 2025-12-07 13:10:48,799 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-07 05:11:33] 2025-12-07 13:10:48,799 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-07 05:11:33] 2025-12-07 13:10:48,800 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-07 05:11:33] 2025-12-07 13:10:48,800 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-07 05:11:33] 2025-12-07 13:10:48,800 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-07 05:11:33] 2025-12-07 13:10:48,800 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-07 05:11:33] 2025-12-07 13:10:48,800 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-07 05:11:33] 2025-12-07 13:10:48,800 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-07 05:11:33] 2025-12-07 13:10:48,800 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-07 05:11:33] 2025-12-07 13:10:48,800 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-07 05:11:33] 2025-12-07 13:10:48,800 | INFO     | job 6895364669 has completed (purged errors)
[2025-12-07 05:11:33] 2025-12-07 13:10:48,800 | INFO     | overall cleanup function is called
[2025-12-07 05:11:33] 2025-12-07 13:10:49,833 | INFO     | --- collectZombieJob: --- 10, [3733523]
[2025-12-07 05:11:33] 2025-12-07 13:10:49,834 | INFO     | zombie collector waiting for pid 3733523
[2025-12-07 05:11:33] 2025-12-07 13:10:49,834 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-07 05:11:33] 2025-12-07 13:10:49,834 | INFO     | collected zombie processes
[2025-12-07 05:11:33] 2025-12-07 13:10:49,834 | INFO     | will attempt to kill all subprocesses of pid=3733523
[2025-12-07 05:11:33] 2025-12-07 13:10:50,760 | INFO     | process IDs to be killed: [3733523] (in reverse order)
[2025-12-07 05:11:33] 2025-12-07 13:10:51,007 | WARNING  | found no corresponding commands to process id(s)
[2025-12-07 05:11:33] 2025-12-07 13:10:51,008 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-07 05:11:33] 2025-12-07 13:10:51,021 | INFO     | did not find any defunct processes belonging to 3733523
[2025-12-07 05:11:33] 2025-12-07 13:10:51,035 | INFO     | did not find any defunct processes belonging to 3733523
[2025-12-07 05:11:33] 2025-12-07 13:10:51,040 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-07 05:11:33] 2025-12-07 13:10:51,041 | INFO     | ready for new job
[2025-12-07 05:11:33] 2025-12-07 13:10:51,041 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-07 05:11:33] 2025-12-07 13:10:51,056 | INFO     | ***************************************
[2025-12-07 05:11:33] 2025-12-07 13:10:51,056 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-07 05:11:33] 2025-12-07 13:10:51,056 | INFO     | ***************************************
[2025-12-07 05:11:33] 2025-12-07 13:10:51,056 | INFO     | 
[2025-12-07 05:11:33] 2025-12-07 13:10:51,058 | INFO     | architecture information:
[2025-12-07 05:11:33] 2025-12-07 13:10:51,062 | INFO     | executing command: cat /etc/os-release
[2025-12-07 05:11:33] 2025-12-07 13:10:51,116 | INFO     | cat /etc/os-release:
[2025-12-07 05:11:33] NAME="CentOS Linux"
[2025-12-07 05:11:33] VERSION="7 (Core)"
[2025-12-07 05:11:33] ID="centos"
[2025-12-07 05:11:33] ID_LIKE="rhel fedora"
[2025-12-07 05:11:33] VERSION_ID="7"
[2025-12-07 05:11:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-07 05:11:33] ANSI_COLOR="0;31"
[2025-12-07 05:11:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-07 05:11:33] HOME_URL="https://www.centos.org/"
[2025-12-07 05:11:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-07 05:11:33] 
[2025-12-07 05:11:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-07 05:11:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-07 05:11:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-07 05:11:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-07 05:11:33] 
[2025-12-07 05:11:33] 2025-12-07 13:10:51,116 | INFO     | ***************************************
[2025-12-07 05:11:33] 2025-12-07 13:10:51,620 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc241/slots/3
[2025-12-07 05:11:33] 2025-12-07 13:10:51,683 | INFO     | sufficient remaining disk space (58915291136 B)
[2025-12-07 05:11:33] 2025-12-07 13:10:51,683 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-07 05:11:33] 2025-12-07 13:10:51,683 | INFO     | current server update state: UPDATING_FINAL
[2025-12-07 05:11:33] 2025-12-07 13:10:51,683 | INFO     | update_server=False
[2025-12-07 05:11:33] 2025-12-07 13:10:51,683 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-07 05:11:33] 2025-12-07 13:10:51,758 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-07 05:11:33] 2025-12-07 13:10:51,758 | INFO     | aborting loop
[2025-12-07 05:11:33] 2025-12-07 13:10:51,778 | INFO     | all payload control threads have been joined
[2025-12-07 05:11:33] 2025-12-07 13:10:52,693 | INFO     | [job] retrieve thread has finished
[2025-12-07 05:11:33] 2025-12-07 13:10:52,743 | INFO     | all data control threads have been joined
[2025-12-07 05:11:33] 2025-12-07 13:10:52,766 | INFO     | [job] job monitor thread has finished
[2025-12-07 05:11:33] 2025-12-07 13:10:52,784 | INFO     | [payload] control thread has finished
[2025-12-07 05:11:33] 2025-12-07 13:10:52,804 | INFO     | [payload] validate_pre thread has finished
[2025-12-07 05:11:33] 2025-12-07 13:10:52,804 | INFO     | [payload] execute_payloads thread has finished
[2025-12-07 05:11:33] 2025-12-07 13:10:52,920 | INFO     | [payload] validate_post thread has finished
[2025-12-07 05:11:33] 2025-12-07 13:10:52,999 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-07 05:11:33] 2025-12-07 13:10:53,216 | INFO     | [job] create_data_payload thread has finished
[2025-12-07 05:11:33] 2025-12-07 13:10:53,388 | INFO     | all job control threads have been joined
[2025-12-07 05:11:33] 2025-12-07 13:10:53,444 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-07 05:11:33] 2025-12-07 13:10:53,528 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-07 05:11:33] 2025-12-07 13:10:53,618 | INFO     | [data] copytool_in thread has finished
[2025-12-07 05:11:33] 2025-12-07 13:10:53,646 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-07 05:11:33] 2025-12-07 13:10:53,749 | INFO     | [data] control thread has finished
[2025-12-07 05:11:33] 2025-12-07 13:10:53,758 | INFO     | [job] validate thread has finished
[2025-12-07 05:11:33] 2025-12-07 13:10:53,916 | INFO     | [payload] failed_post thread has finished
[2025-12-07 05:11:33] 2025-12-07 13:10:54,394 | INFO     | [job] control thread has finished
[2025-12-07 05:11:33] 2025-12-07 13:10:54,534 | INFO     | [job] queue monitor thread has finished
[2025-12-07 05:11:33] 2025-12-07 13:10:55,008 | INFO     | [data] copytool_out thread has finished
[2025-12-07 05:11:33] 2025-12-07 13:10:57,450 | INFO     | [data] queue_monitor thread has finished
[2025-12-07 05:11:33] 2025-12-07 13:11:21,976 | INFO     | PID=3724711 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-07 05:11:33] 2025-12-07 13:11:21,976 | INFO     | .. there are 12 such processes running
[2025-12-07 05:11:33] 2025-12-07 13:11:21,976 | INFO     | found 0 job(s) in 20 queues
[2025-12-07 05:11:33] 2025-12-07 13:11:21,983 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-07 05:11:33] 2025-12-07 13:11:21,983 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-07 05:11:33] 2025-12-07 13:11:25,049 | INFO     | [monitor] cgroup control has ended
[2025-12-07 05:11:33] 2025-12-07 13:11:26,794 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135793988527936)>', '<ExcThread(monitor, started 135793502840576)>']
[2025-12-07 05:11:33] 2025-12-07 13:11:27,010 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-07 05:11:33] 2025-12-07 13:11:27,011 | INFO     | [monitor] control thread has ended
[2025-12-07 05:11:33] 2025-12-07 13:11:31,818 | INFO     | all workflow threads have been joined
[2025-12-07 05:11:33] 2025-12-07 13:11:31,819 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-07 05:11:33] 2025-12-07 13:11:31,819 | INFO     | traces error code: 0
[2025-12-07 05:11:33] 2025-12-07 13:11:31,819 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-07 05:11:33] 2025-12-07 13:11:32,291 [wrapper] ==== pilot stdout END ====
[2025-12-07 05:11:33] 2025-12-07 13:11:32,314 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-07 05:11:33] 2025-12-07 13:11:32,336 [wrapper] pilotpid: 3724711
[2025-12-07 05:11:33] 2025-12-07 13:11:32,351 [wrapper] Pilot exit status: 0
[2025-12-07 05:11:33] 2025-12-07 13:11:32,422 [wrapper] pandaids: 6895364669
[2025-12-07 05:11:33] 2025-12-07 13:11:32,626 [wrapper] cleanup supervisor_pilot 1018511 3724712
[2025-12-07 05:11:33] 2025-12-07 13:11:32,647 [wrapper] Test setup, not cleaning
[2025-12-07 05:11:33] 2025-12-07 13:11:32,664 [wrapper] apfmon messages muted
[2025-12-07 05:11:33] 2025-12-07 13:11:32,684 [wrapper] ==== wrapper stdout END ====
[2025-12-07 05:11:33] 2025-12-07 13:11:32,709 [wrapper] ==== wrapper stderr END ====
[2025-12-07 05:11:33]  *** Error codes and diagnostics ***
[2025-12-07 05:11:33]     "exeErrorCode": 0,
[2025-12-07 05:11:33]     "exeErrorDiag": "",
[2025-12-07 05:11:33]     "pilotErrorCode": 0,
[2025-12-07 05:11:33]     "pilotErrorDiag": "",
[2025-12-07 05:11:33]  *** Listing of results directory ***
[2025-12-07 05:11:33] total 1314264
[2025-12-07 05:11:33] -rw-r--r-- 1 root root    576529 Nov 23 08:03 pilot3.tar.gz
[2025-12-07 05:11:33] -rwx------ 1 4871 1028     36292 Nov 23 08:15 runpilot2-wrapper.sh
[2025-12-07 05:11:33] -rw-r--r-- 1 root root      5112 Nov 23 08:15 queuedata.json
[2025-12-07 05:11:33] -rw-r--r-- 1 root root       100 Dec  6 07:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-07 05:11:33] -rwxr-xr-x 1 root root      7986 Dec  6 07:14 run_atlas
[2025-12-07 05:11:33] -rw-r--r-- 1 root root       105 Dec  6 07:14 job.xml
[2025-12-07 05:11:33] -rw-r--r-- 2 root root 409514147 Dec  6 07:14 EVNT.47483658._000814.pool.root.1
[2025-12-07 05:11:33] drwxrwx--x 2 root root      4096 Dec  6 07:14 shared
[2025-12-07 05:11:33] -rw-r--r-- 2 root root    590104 Dec  6 07:14 input.tar.gz
[2025-12-07 05:11:33] -rw-r--r-- 2 root root     15847 Dec  6 07:14 start_atlas.sh
[2025-12-07 05:11:33] -rw-r--r-- 1 root root         0 Dec  6 07:14 boinc_setup_complete
[2025-12-07 05:11:33] -rw-r--r-- 1 root root      9229 Dec  6 07:14 init_data.xml
[2025-12-07 05:11:33] -rw-r--r-- 1 root root         0 Dec  6 07:14 boinc_lockfile
[2025-12-07 05:11:33] -rw-r--r-- 1 root root      2785 Dec  6 07:14 pandaJob.out
[2025-12-07 05:11:33] -rw------- 1 root root    985902 Dec  6 07:15 agis_schedconf.cvmfs.json
[2025-12-07 05:11:33] drwxr-xr-x 5  320  320      4096 Dec  6 07:15 pilot3
[2025-12-07 05:11:33] -rw-r--r-- 1 root root       533 Dec  7 04:45 boinc_task_state.xml
[2025-12-07 05:11:33] -rw------- 1 root root 905690774 Dec  7 05:08 HITS.47556137._008005.pool.root.1
[2025-12-07 05:11:33] -rw------- 1 root root      1049 Dec  7 05:10 memory_monitor_summary.json
[2025-12-07 05:11:33] -rw------- 1 root root   1516240 Dec  7 05:10 agis_ddmendpoints.agis.ALL.json
[2025-12-07 05:11:33] -rw------- 1 root root   2612266 Dec  7 05:10 log.47556137._008005.job.log.tgz.1
[2025-12-07 05:11:33] -rw------- 1 root root        95 Dec  7 05:10 pilot_heartbeat.json
[2025-12-07 05:11:33] -rw------- 1 root root      8612 Dec  7 05:10 heartbeat.json
[2025-12-07 05:11:33] -rw-r--r-- 1 root root      8192 Dec  7 05:11 boinc_mmap_file
[2025-12-07 05:11:33] -rw-r--r-- 1 root root        29 Dec  7 05:11 wrapper_checkpoint.txt
[2025-12-07 05:11:33] -rw------- 1 root root      4838 Dec  7 05:11 pilotlog.txt
[2025-12-07 05:11:33] -rw------- 1 root root  10730713 Dec  7 05:11 log.47556137._008005.job.log.1
[2025-12-07 05:11:33] -rw------- 1 root root       353 Dec  7 05:11 output.list
[2025-12-07 05:11:33] -rw-r--r-- 1 root root       620 Dec  7 05:11 runtime_log
[2025-12-07 05:11:33] -rw------- 1 root root  13363200 Dec  7 05:11 result.tar.gz
[2025-12-07 05:11:33] -rw-r--r-- 1 root root      9021 Dec  7 05:11 runtime_log.err
[2025-12-07 05:11:33] -rw------- 1 root root       661 Dec  7 05:11 GWxMDmovRh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmU2KKDmuq5OQn.diag
[2025-12-07 05:11:33] -rw-r--r-- 1 root root     21472 Dec  7 05:11 stderr.txt
[2025-12-07 05:11:33] HITS file was successfully produced:
[2025-12-07 05:11:33] -rw------- 1 root root 905690774 Dec  7 05:08 shared/HITS.pool.root.1
[2025-12-07 05:11:33]  *** Contents of shared directory: ***
[2025-12-07 05:11:33] total 1298040
[2025-12-07 05:11:33] -rw-r--r-- 2 root root 409514147 Dec  6 07:14 ATLAS.root_0
[2025-12-07 05:11:33] -rw-r--r-- 2 root root    590104 Dec  6 07:14 input.tar.gz
[2025-12-07 05:11:33] -rw-r--r-- 2 root root     15847 Dec  6 07:14 start_atlas.sh
[2025-12-07 05:11:33] -rw------- 1 root root 905690774 Dec  7 05:08 HITS.pool.root.1
[2025-12-07 05:11:33] -rw------- 1 root root  13363200 Dec  7 05:11 result.tar.gz
05:11:34 (3720759): run_atlas exited; CPU time 205140.138739
05:11:34 (3720759): called boinc_finish(0)

</stderr_txt>
]]>

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