Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
00:41:19 (3256679): wrapper (7.7.26015): starting
00:41:19 (3256679): wrapper: running run_atlas (--nthreads 10)
[2025-12-06 00:41:19] Arguments: --nthreads 10
[2025-12-06 00:41:19] Threads: 10
[2025-12-06 00:41:19] Checking for CVMFS
[2025-12-06 00:41:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-06 00:41:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-06 00:41:19] Running cvmfs_config stat atlas.cern.ch
[2025-12-06 00:41:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-06 00:41:20] 2.13.3.0 8606 6661 64280 153683 1 101 3103166 4096001 10677 130560 0 21601796 99.962 912745 695 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-12-06 00:41:20] CVMFS is ok
[2025-12-06 00:41:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-06 00:41:20] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-06 00:41:20] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-06 00:41:20] Further information can be found at the LHC@home message board.
[2025-12-06 00:41:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-06 00:41:20] Checking for apptainer binary...
[2025-12-06 00:41:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-06 00:41:20] Running /usr/bin/apptainer --version
[2025-12-06 00:41:20] apptainer version 1.4.2
[2025-12-06 00:41:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-06 00:41:21] 3950x-linux
[2025-12-06 00:41:21] apptainer works
[2025-12-06 00:41:21] Set ATHENA_PROC_NUMBER=10
[2025-12-06 00:41:21] Set ATHENA_CORE_NUMBER=10
[2025-12-06 00:41:21] Starting ATLAS job with PandaID=6895364452
[2025-12-06 00:41:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc241/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-06 23:16:21]  *** The last 200 lines of the pilot log: ***
[2025-12-06 23:16:21] 2025-12-07 07:14:58,358 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-06 23:16:21] 2025-12-07 07:14:59,607 | INFO     | time since job start (81181s) is within the limit (172800.0s)
[2025-12-06 23:16:21] 2025-12-07 07:15:00,861 | INFO     | monitor loop #5251: job 0:6895364452 is in state 'finished'
[2025-12-06 23:16:21] 2025-12-07 07:15:00,861 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-06 23:16:21] 2025-12-07 07:15:01,612 | INFO     | time since job start (81183s) is within the limit (172800.0s)
[2025-12-06 23:16:21] 2025-12-07 07:15:03,364 | INFO     | monitor loop #5252: job 0:6895364452 is in state 'finished'
[2025-12-06 23:16:21] 2025-12-07 07:15:03,364 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-06 23:16:21] 2025-12-07 07:15:03,620 | INFO     | time since job start (81185s) is within the limit (172800.0s)
[2025-12-06 23:16:21] 2025-12-07 07:15:05,476 | INFO     | PID=3264352 has CPU usage=11.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-12-06 23:16:21] 2025-12-07 07:15:05,476 | INFO     | .. there are 12 such processes running
[2025-12-06 23:16:21] 2025-12-07 07:15:05,872 | INFO     | monitor loop #5253: job 0:6895364452 is in state 'finished'
[2025-12-06 23:16:21] 2025-12-07 07:15:05,872 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-06 23:16:21] 2025-12-07 07:15:06,482 | INFO     | time since job start (81188s) is within the limit (172800.0s)
[2025-12-06 23:16:21] 2025-12-07 07:15:08,376 | INFO     | monitor loop #5254: job 0:6895364452 is in state 'finished'
[2025-12-06 23:16:21] 2025-12-07 07:15:08,376 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-06 23:16:21] 2025-12-07 07:15:08,487 | INFO     | time since job start (81190s) is within the limit (172800.0s)
[2025-12-06 23:16:21] 2025-12-07 07:15:09,726 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-06 23:16:21] 2025-12-07 07:15:09,743 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3400.1258125000004
[2025-12-06 23:16:21] 2025-12-07 07:15:09,773 | INFO     | using path: /var/lib/multiboinc/boinc241/slots/2/PanDA_Pilot-6895364452/memory_monitor_summary.json (trf name=prmon)
[2025-12-06 23:16:21] 2025-12-07 07:15:09,773 | INFO     | extracted standard info from prmon json
[2025-12-06 23:16:21] 2025-12-07 07:15:09,773 | INFO     | extracted standard memory fields from prmon json
[2025-12-06 23:16:21] 2025-12-07 07:15:09,774 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-06 23:16:21] 2025-12-07 07:15:09,866 | INFO     | fitting pss+swap vs Time
[2025-12-06 23:16:21] 2025-12-07 07:15:09,868 | INFO     | sum of square deviations: 729510429912.0552
[2025-12-06 23:16:21] 2025-12-07 07:15:10,045 | INFO     | sum of deviations: 2769068224580.601
[2025-12-06 23:16:21] 2025-12-07 07:15:10,045 | INFO     | mean x: 1765051138.2571428
[2025-12-06 23:16:21] 2025-12-07 07:15:10,045 | INFO     | mean y: 3124557.7
[2025-12-06 23:16:21] 2025-12-07 07:15:10,045 | INFO     | intersect: -6696638490.645841
[2025-12-06 23:16:21] 2025-12-07 07:15:10,046 | INFO     | chi2: 16.505211128356354
[2025-12-06 23:16:21] 2025-12-07 07:15:10,057 | INFO     | sum of square deviations: 721315251403.7109
[2025-12-06 23:16:21] 2025-12-07 07:15:10,189 | INFO     | sum of deviations: 3295330493912.987
[2025-12-06 23:16:21] 2025-12-07 07:15:10,189 | INFO     | mean x: 1765050985.7713208
[2025-12-06 23:16:21] 2025-12-07 07:15:10,189 | INFO     | mean y: 3134348.1154716983
[2025-12-06 23:16:21] 2025-12-07 07:15:10,189 | INFO     | intersect: -8060505406.353037
[2025-12-06 23:16:21] 2025-12-07 07:15:10,190 | INFO     | chi2: 12.741259597749242
[2025-12-06 23:16:21] 2025-12-07 07:15:10,201 | INFO     | current chi2=12.741259597749242 (change=22.804625165566968 %)
[2025-12-06 23:16:21] 2025-12-07 07:15:10,202 | INFO     | right removable region: 1324
[2025-12-06 23:16:21] 2025-12-07 07:15:10,203 | INFO     | sum of square deviations: 721312203233.7091
[2025-12-06 23:16:21] 2025-12-07 07:15:10,347 | INFO     | sum of deviations: 2253681814711.3735
[2025-12-06 23:16:21] 2025-12-07 07:15:10,348 | INFO     | mean x: 1765051290.7713208
[2025-12-06 23:16:21] 2025-12-07 07:15:10,348 | INFO     | mean y: 3134142.8098113206
[2025-12-06 23:16:21] 2025-12-07 07:15:10,348 | INFO     | intersect: -5511626287.155232
[2025-12-06 23:16:21] 2025-12-07 07:15:10,358 | INFO     | chi2: 13.26706110576582
[2025-12-06 23:16:21] 2025-12-07 07:15:10,358 | INFO     | current chi2=13.26706110576582 (change=19.61895547659681 %)
[2025-12-06 23:16:21] 2025-12-07 07:15:10,358 | INFO     | left removable region: 10
[2025-12-06 23:16:21] 2025-12-07 07:15:10,359 | INFO     | sum of square deviations: 703497171857.4313
[2025-12-06 23:16:21] 2025-12-07 07:15:10,493 | INFO     | sum of deviations: 2592899656999.648
[2025-12-06 23:16:21] 2025-12-07 07:15:10,494 | INFO     | mean x: 1765051260.2952816
[2025-12-06 23:16:21] 2025-12-07 07:15:10,498 | INFO     | mean y: 3150978.379756469
[2025-12-06 23:16:21] 2025-12-07 07:15:10,498 | INFO     | intersect: -6502348958.916243
[2025-12-06 23:16:21] 2025-12-07 07:15:10,509 | INFO     | time since job start (81192s) is within the limit (172800.0s)
[2025-12-06 23:16:21] 2025-12-07 07:15:10,509 | INFO     | chi2: 7.934228036587362
[2025-12-06 23:16:21] 2025-12-07 07:15:10,510 | INFO     | current memory leak: 3.69 B/s (using 1314 data points, chi2=7.93)
[2025-12-06 23:16:21] 2025-12-07 07:15:10,511 | INFO     | could have reported an average CPU frequency of 3400 MHz (48 samples)
[2025-12-06 23:16:21] 2025-12-07 07:15:10,511 | INFO     | ..............................
[2025-12-06 23:16:21] 2025-12-07 07:15:10,511 | INFO     | . Timing measurements:
[2025-12-06 23:16:21] 2025-12-07 07:15:10,511 | INFO     | . get job = 0 s
[2025-12-06 23:16:21] 2025-12-07 07:15:10,511 | INFO     | . initial setup = 5 s
[2025-12-06 23:16:21] 2025-12-07 07:15:10,511 | INFO     | . payload setup = 23 s
[2025-12-06 23:16:21] 2025-12-07 07:15:10,511 | INFO     | . stage-in = 0 s
[2025-12-06 23:16:21] 2025-12-07 07:15:10,511 | INFO     | . payload execution = 81094 s
[2025-12-06 23:16:21] 2025-12-07 07:15:10,511 | INFO     | . stage-out = 8 s
[2025-12-06 23:16:21] 2025-12-07 07:15:10,511 | INFO     | . log creation = 2 s
[2025-12-06 23:16:21] 2025-12-07 07:15:10,511 | INFO     | ..............................
[2025-12-06 23:16:21] 2025-12-07 07:15:10,812 | INFO     | 
[2025-12-06 23:16:21] 2025-12-07 07:15:10,813 | INFO     | job summary report
[2025-12-06 23:16:21] 2025-12-07 07:15:10,813 | INFO     | --------------------------------------------------
[2025-12-06 23:16:21] 2025-12-07 07:15:10,813 | INFO     | PanDA job id: 6895364452
[2025-12-06 23:16:21] 2025-12-07 07:15:10,813 | INFO     | task id: 47556137
[2025-12-06 23:16:21] 2025-12-07 07:15:10,813 | INFO     | errors: (none)
[2025-12-06 23:16:21] 2025-12-07 07:15:10,813 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-06 23:16:21] 2025-12-07 07:15:10,813 | INFO     | pilot state: finished 
[2025-12-06 23:16:21] 2025-12-07 07:15:10,813 | INFO     | transexitcode: 0
[2025-12-06 23:16:21] 2025-12-07 07:15:10,813 | INFO     | exeerrorcode: 0
[2025-12-06 23:16:21] 2025-12-07 07:15:10,813 | INFO     | exeerrordiag: 
[2025-12-06 23:16:21] 2025-12-07 07:15:10,813 | INFO     | exitcode: 0
[2025-12-06 23:16:21] 2025-12-07 07:15:10,813 | INFO     | exitmsg: OK
[2025-12-06 23:16:21] 2025-12-07 07:15:10,813 | INFO     | cpuconsumptiontime: 208686 s
[2025-12-06 23:16:21] 2025-12-07 07:15:10,813 | INFO     | nevents: 1000
[2025-12-06 23:16:21] 2025-12-07 07:15:10,814 | INFO     | neventsw: 0
[2025-12-06 23:16:21] 2025-12-07 07:15:10,814 | INFO     | pid: 3278127
[2025-12-06 23:16:21] 2025-12-07 07:15:10,814 | INFO     | pgrp: 3278127
[2025-12-06 23:16:21] 2025-12-07 07:15:10,814 | INFO     | corecount: 10
[2025-12-06 23:16:21] 2025-12-07 07:15:10,814 | INFO     | event service: False
[2025-12-06 23:16:21] 2025-12-07 07:15:10,814 | INFO     | sizes: {0: 2284051, 1: 2284135, 2: 2284334, 13: 2284334, 18: 2284652, 24: 2284680, 81121: 2349391, 81122: 2349390, 81132: 2358524, 81151: 2358714}
[2025-12-06 23:16:21] 2025-12-07 07:15:10,814 | INFO     | --------------------------------------------------
[2025-12-06 23:16:21] 2025-12-07 07:15:10,814 | INFO     | 
[2025-12-06 23:16:21] 2025-12-07 07:15:10,814 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc241/slots/2
[2025-12-06 23:16:21] 2025-12-07 07:15:10,902 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-06 23:16:21] 2025-12-07 07:15:10,902 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-06 23:16:21] 2025-12-07 07:15:10,902 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-06 23:16:21] 2025-12-07 07:15:10,902 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-06 23:16:21] 2025-12-07 07:15:10,902 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-06 23:16:21] 2025-12-07 07:15:10,902 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-06 23:16:21] 2025-12-07 07:15:10,902 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-06 23:16:21] 2025-12-07 07:15:10,902 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-06 23:16:21] 2025-12-07 07:15:10,903 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-06 23:16:21] 2025-12-07 07:15:10,903 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-06 23:16:21] 2025-12-07 07:15:10,903 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-06 23:16:21] 2025-12-07 07:15:10,903 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-06 23:16:21] 2025-12-07 07:15:10,903 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-06 23:16:21] 2025-12-07 07:15:10,903 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-06 23:16:21] 2025-12-07 07:15:10,903 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-06 23:16:21] 2025-12-07 07:15:10,903 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-06 23:16:21] 2025-12-07 07:15:10,903 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-06 23:16:21] 2025-12-07 07:15:10,903 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-06 23:16:21] 2025-12-07 07:15:10,903 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-06 23:16:21] 2025-12-07 07:15:10,903 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-06 23:16:21] 2025-12-07 07:15:10,904 | INFO     | job 6895364452 has completed (purged errors)
[2025-12-06 23:16:21] 2025-12-07 07:15:10,904 | INFO     | overall cleanup function is called
[2025-12-06 23:16:21] 2025-12-07 07:15:11,977 | INFO     | --- collectZombieJob: --- 10, [3278127]
[2025-12-06 23:16:21] 2025-12-07 07:15:11,978 | INFO     | zombie collector waiting for pid 3278127
[2025-12-06 23:16:21] 2025-12-07 07:15:11,978 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-06 23:16:21] 2025-12-07 07:15:11,978 | INFO     | collected zombie processes
[2025-12-06 23:16:21] 2025-12-07 07:15:11,978 | INFO     | will attempt to kill all subprocesses of pid=3278127
[2025-12-06 23:16:21] 2025-12-07 07:15:12,914 | INFO     | process IDs to be killed: [3278127] (in reverse order)
[2025-12-06 23:16:21] 2025-12-07 07:15:13,196 | WARNING  | found no corresponding commands to process id(s)
[2025-12-06 23:16:21] 2025-12-07 07:15:13,196 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-06 23:16:21] 2025-12-07 07:15:13,222 | INFO     | did not find any defunct processes belonging to 3278127
[2025-12-06 23:16:21] 2025-12-07 07:15:13,254 | INFO     | did not find any defunct processes belonging to 3278127
[2025-12-06 23:16:21] 2025-12-07 07:15:13,258 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-06 23:16:21] 2025-12-07 07:15:13,258 | INFO     | ready for new job
[2025-12-06 23:16:21] 2025-12-07 07:15:13,258 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-06 23:16:21] 2025-12-07 07:15:13,273 | INFO     | ***************************************
[2025-12-06 23:16:21] 2025-12-07 07:15:13,273 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-06 23:16:21] 2025-12-07 07:15:13,274 | INFO     | ***************************************
[2025-12-06 23:16:21] 2025-12-07 07:15:13,274 | INFO     | 
[2025-12-06 23:16:21] 2025-12-07 07:15:13,281 | INFO     | architecture information:
[2025-12-06 23:16:21] 2025-12-07 07:15:13,286 | INFO     | executing command: cat /etc/os-release
[2025-12-06 23:16:21] 2025-12-07 07:15:13,345 | INFO     | cat /etc/os-release:
[2025-12-06 23:16:21] NAME="CentOS Linux"
[2025-12-06 23:16:21] VERSION="7 (Core)"
[2025-12-06 23:16:21] ID="centos"
[2025-12-06 23:16:21] ID_LIKE="rhel fedora"
[2025-12-06 23:16:21] VERSION_ID="7"
[2025-12-06 23:16:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-06 23:16:21] ANSI_COLOR="0;31"
[2025-12-06 23:16:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-06 23:16:21] HOME_URL="https://www.centos.org/"
[2025-12-06 23:16:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-06 23:16:21] 
[2025-12-06 23:16:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-06 23:16:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-06 23:16:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-06 23:16:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-06 23:16:21] 
[2025-12-06 23:16:21] 2025-12-07 07:15:13,346 | INFO     | ***************************************
[2025-12-06 23:16:21] 2025-12-07 07:15:13,851 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc241/slots/2
[2025-12-06 23:16:21] 2025-12-07 07:15:13,923 | INFO     | sufficient remaining disk space (53954478080 B)
[2025-12-06 23:16:21] 2025-12-07 07:15:13,923 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-06 23:16:21] 2025-12-07 07:15:13,924 | INFO     | current server update state: UPDATING_FINAL
[2025-12-06 23:16:21] 2025-12-07 07:15:13,924 | INFO     | update_server=False
[2025-12-06 23:16:21] 2025-12-07 07:15:13,924 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-06 23:16:21] 2025-12-07 07:15:14,137 | INFO     | all job control threads have been joined
[2025-12-06 23:16:21] 2025-12-07 07:15:14,380 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-06 23:16:21] 2025-12-07 07:15:14,406 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-06 23:16:21] 2025-12-07 07:15:14,407 | INFO     | aborting loop
[2025-12-06 23:16:21] 2025-12-07 07:15:14,478 | INFO     | all payload control threads have been joined
[2025-12-06 23:16:21] 2025-12-07 07:15:14,936 | INFO     | [job] retrieve thread has finished
[2025-12-06 23:16:21] 2025-12-07 07:15:14,979 | INFO     | all data control threads have been joined
[2025-12-06 23:16:21] 2025-12-07 07:15:15,131 | INFO     | [job] create_data_payload thread has finished
[2025-12-06 23:16:21] 2025-12-07 07:15:15,133 | INFO     | [payload] execute_payloads thread has finished
[2025-12-06 23:16:21] 2025-12-07 07:15:15,143 | INFO     | [job] control thread has finished
[2025-12-06 23:16:21] 2025-12-07 07:15:15,336 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-06 23:16:21] 2025-12-07 07:15:15,336 | INFO     | [data] copytool_in thread has finished
[2025-12-06 23:16:21] 2025-12-07 07:15:15,412 | INFO     | [job] job monitor thread has finished
[2025-12-06 23:16:21] 2025-12-07 07:15:15,484 | INFO     | [payload] control thread has finished
[2025-12-06 23:16:21] 2025-12-07 07:15:15,611 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-06 23:16:21] 2025-12-07 07:15:15,657 | INFO     | [payload] validate_pre thread has finished
[2025-12-06 23:16:21] 2025-12-07 07:15:15,779 | INFO     | [payload] failed_post thread has finished
[2025-12-06 23:16:21] 2025-12-07 07:15:15,838 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-06 23:16:21] 2025-12-07 07:15:15,985 | INFO     | [data] control thread has finished
[2025-12-06 23:16:21] 2025-12-07 07:15:16,033 | INFO     | [payload] validate_post thread has finished
[2025-12-06 23:16:21] 2025-12-07 07:15:16,345 | INFO     | [job] validate thread has finished
[2025-12-06 23:16:21] 2025-12-07 07:15:16,385 | INFO     | [data] copytool_out thread has finished
[2025-12-06 23:16:21] 2025-12-07 07:15:16,844 | INFO     | [job] queue monitor thread has finished
[2025-12-06 23:16:21] 2025-12-07 07:15:19,617 | INFO     | [data] queue_monitor thread has finished
[2025-12-06 23:16:21] 2025-12-07 07:15:44,290 | INFO     | PID=3264352 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-06 23:16:21] 2025-12-07 07:15:44,290 | INFO     | .. there are 12 such processes running
[2025-12-06 23:16:21] 2025-12-07 07:15:44,291 | INFO     | found 0 job(s) in 20 queues
[2025-12-06 23:16:21] 2025-12-07 07:15:44,291 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-06 23:16:21] 2025-12-07 07:15:44,291 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-06 23:16:21] 2025-12-07 07:16:13,932 | INFO     | [monitor] cgroup control has ended
[2025-12-06 23:16:21] 2025-12-07 07:16:15,341 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124692581005120)>', '<ExcThread(monitor, started 124691943511808)>']
[2025-12-06 23:16:21] 2025-12-07 07:16:15,457 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-06 23:16:21] 2025-12-07 07:16:15,458 | INFO     | [monitor] control thread has ended
[2025-12-06 23:16:21] 2025-12-07 07:16:20,367 | INFO     | all workflow threads have been joined
[2025-12-06 23:16:21] 2025-12-07 07:16:20,368 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-06 23:16:21] 2025-12-07 07:16:20,368 | INFO     | traces error code: 0
[2025-12-06 23:16:21] 2025-12-07 07:16:20,368 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-06 23:16:21] 2025-12-07 07:16:20,923 [wrapper] ==== pilot stdout END ====
[2025-12-06 23:16:21] 2025-12-07 07:16:20,942 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-06 23:16:21] 2025-12-07 07:16:20,954 [wrapper] pilotpid: 3264352
[2025-12-06 23:16:21] 2025-12-07 07:16:20,968 [wrapper] Pilot exit status: 0
[2025-12-06 23:16:21] 2025-12-07 07:16:21,032 [wrapper] pandaids: 6895364452
[2025-12-06 23:16:21] 2025-12-07 07:16:21,254 [wrapper] cleanup supervisor_pilot  577217 3264353
[2025-12-06 23:16:21] 2025-12-07 07:16:21,272 [wrapper] Test setup, not cleaning
[2025-12-06 23:16:21] 2025-12-07 07:16:21,287 [wrapper] apfmon messages muted
[2025-12-06 23:16:21] 2025-12-07 07:16:21,301 [wrapper] ==== wrapper stdout END ====
[2025-12-06 23:16:21] 2025-12-07 07:16:21,316 [wrapper] ==== wrapper stderr END ====
[2025-12-06 23:16:21]  *** Error codes and diagnostics ***
[2025-12-06 23:16:21]     "exeErrorCode": 0,
[2025-12-06 23:16:21]     "exeErrorDiag": "",
[2025-12-06 23:16:21]     "pilotErrorCode": 0,
[2025-12-06 23:16:21]     "pilotErrorDiag": "",
[2025-12-06 23:16:21]  *** Listing of results directory ***
[2025-12-06 23:16:21] total 1335264
[2025-12-06 23:16:21] -rw-r--r-- 1 root root    576529 Nov 23 07:18 pilot3.tar.gz
[2025-12-06 23:16:21] -rwx------ 1 4871 1028     36292 Nov 23 07:57 runpilot2-wrapper.sh
[2025-12-06 23:16:21] -rw-r--r-- 1 root root      5112 Nov 23 07:57 queuedata.json
[2025-12-06 23:16:21] -rw-r--r-- 1 root root       100 Dec  6 00:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-06 23:16:21] -rwxr-xr-x 1 root root      7986 Dec  6 00:41 run_atlas
[2025-12-06 23:16:21] -rw-r--r-- 1 root root       105 Dec  6 00:41 job.xml
[2025-12-06 23:16:21] -rw-r--r-- 2 root root 409845487 Dec  6 00:41 EVNT.47483658._000806.pool.root.1
[2025-12-06 23:16:21] drwxrwx--x 2 root root      4096 Dec  6 00:41 shared
[2025-12-06 23:16:21] -rw-r--r-- 2 root root    590097 Dec  6 00:41 input.tar.gz
[2025-12-06 23:16:21] -rw-r--r-- 2 root root     15847 Dec  6 00:41 start_atlas.sh
[2025-12-06 23:16:21] -rw-r--r-- 1 root root         0 Dec  6 00:41 boinc_setup_complete
[2025-12-06 23:16:21] -rw-r--r-- 1 root root         0 Dec  6 00:41 boinc_lockfile
[2025-12-06 23:16:21] -rw-r--r-- 1 root root      2785 Dec  6 00:41 pandaJob.out
[2025-12-06 23:16:21] -rw------- 1 root root    985910 Dec  6 00:41 agis_schedconf.cvmfs.json
[2025-12-06 23:16:21] drwxr-xr-x 5  320  320      4096 Dec  6 00:41 pilot3
[2025-12-06 23:16:21] -rw-r--r-- 1 root root      9237 Dec  6 07:14 init_data.xml
[2025-12-06 23:16:21] -rw-r--r-- 1 root root       533 Dec  6 22:37 boinc_task_state.xml
[2025-12-06 23:16:21] -rw------- 1 root root 926165847 Dec  6 23:13 HITS.47556137._007925.pool.root.1
[2025-12-06 23:16:21] -rw------- 1 root root      1061 Dec  6 23:14 memory_monitor_summary.json
[2025-12-06 23:16:21] -rw------- 1 root root   1516240 Dec  6 23:14 agis_ddmendpoints.agis.ALL.json
[2025-12-06 23:16:21] -rw------- 1 root root   2650321 Dec  6 23:14 log.47556137._007925.job.log.tgz.1
[2025-12-06 23:16:21] -rw------- 1 root root      8602 Dec  6 23:15 heartbeat.json
[2025-12-06 23:16:21] -rw------- 1 root root        95 Dec  6 23:15 pilot_heartbeat.json
[2025-12-06 23:16:21] -rw-r--r-- 1 root root        29 Dec  6 23:16 wrapper_checkpoint.txt
[2025-12-06 23:16:21] -rw-r--r-- 1 root root      8192 Dec  6 23:16 boinc_mmap_file
[2025-12-06 23:16:21] -rw------- 1 root root      4838 Dec  6 23:16 pilotlog.txt
[2025-12-06 23:16:21] -rw------- 1 root root  11041325 Dec  6 23:16 log.47556137._007925.job.log.1
[2025-12-06 23:16:21] -rw------- 1 root root       353 Dec  6 23:16 output.list
[2025-12-06 23:16:21] -rw-r--r-- 1 root root       620 Dec  6 23:16 runtime_log
[2025-12-06 23:16:21] -rw------- 1 root root  13711360 Dec  6 23:16 result.tar.gz
[2025-12-06 23:16:21] -rw-r--r-- 1 root root      9021 Dec  6 23:16 runtime_log.err
[2025-12-06 23:16:21] -rw------- 1 root root       662 Dec  6 23:16 rgRMDmhdRh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmo1KKDmPxOaSn.diag
[2025-12-06 23:16:21] -rw-r--r-- 1 root root     21981 Dec  6 23:16 stderr.txt
[2025-12-06 23:16:21] HITS file was successfully produced:
[2025-12-06 23:16:21] -rw------- 1 root root 926165847 Dec  6 23:13 shared/HITS.pool.root.1
[2025-12-06 23:16:21]  *** Contents of shared directory: ***
[2025-12-06 23:16:21] total 1318696
[2025-12-06 23:16:21] -rw-r--r-- 2 root root 409845487 Dec  6 00:41 ATLAS.root_0
[2025-12-06 23:16:21] -rw-r--r-- 2 root root    590097 Dec  6 00:41 input.tar.gz
[2025-12-06 23:16:21] -rw-r--r-- 2 root root     15847 Dec  6 00:41 start_atlas.sh
[2025-12-06 23:16:21] -rw------- 1 root root 926165847 Dec  6 23:13 HITS.pool.root.1
[2025-12-06 23:16:21] -rw------- 1 root root  13711360 Dec  6 23:16 result.tar.gz
23:16:23 (3256679): run_atlas exited; CPU time 208862.567831
23:16:23 (3256679): called boinc_finish(0)

</stderr_txt>
]]>

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