Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:00:41 (5256): wrapper (7.7.26015): starting
22:00:41 (5256): wrapper: running run_atlas (--nthreads 8)
[2025-12-02 22:00:41] Arguments: --nthreads 8
[2025-12-02 22:00:41] Threads: 8
[2025-12-02 22:00:41] Checking for CVMFS
[2025-12-02 22:00:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 22:00:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 22:00:41] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 22:00:41] /usr/bin/cvmfs_config: line 944: cd: /cvmfs/ligo.storage.igwn.org: Permission denied
[2025-12-02 22:00:41] 
[2025-12-02 22:00:41] CVMFS is ok
[2025-12-02 22:00:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 22:00:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 22:00:41] Further information can be found at the LHC@home message board.
[2025-12-02 22:00:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 22:00:41] Checking for apptainer binary...
[2025-12-02 22:00:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 22:00:41] Running /usr/bin/apptainer --version
[2025-12-02 22:00:41] apptainer version 1.3.2-1.el7
[2025-12-02 22:00:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 22:00:42] c-9-34.aglt2.org
[2025-12-02 22:00:42] apptainer works
[2025-12-02 22:00:42] Set ATHENA_PROC_NUMBER=8
[2025-12-02 22:00:42] Set ATHENA_CORE_NUMBER=8
[2025-12-02 22:00:42] Starting ATLAS job with PandaID=6895340330
[2025-12-02 22:00:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 09:46:01]  *** The last 200 lines of the pilot log: ***
[2025-12-03 09:46:01] 2025-12-03 14:45:26,816 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 09:46:01] 2025-12-03 14:45:26,843 | INFO     | time since job start (42273s) is within the limit (172800.0s)
[2025-12-03 09:46:01] 2025-12-03 14:45:27,707 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-03 09:46:01] 2025-12-03 14:45:27,711 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 3044.7123125
[2025-12-03 09:46:01] 2025-12-03 14:45:27,715 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895340330/memory_monitor_summary.json (trf name=prmon)
[2025-12-03 09:46:01] 2025-12-03 14:45:27,715 | INFO     | extracted standard info from prmon json
[2025-12-03 09:46:01] 2025-12-03 14:45:27,715 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 09:46:01] 2025-12-03 14:45:27,715 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 09:46:01] 2025-12-03 14:45:27,723 | INFO     | fitting pss+swap vs Time
[2025-12-03 09:46:01] 2025-12-03 14:45:27,724 | INFO     | sum of square deviations: 103195969781.16902
[2025-12-03 09:46:01] 2025-12-03 14:45:27,731 | INFO     | sum of deviations: 894247576295.2471
[2025-12-03 09:46:01] 2025-12-03 14:45:27,731 | INFO     | mean x: 1764751986.1558442
[2025-12-03 09:46:01] 2025-12-03 14:45:27,731 | INFO     | mean y: 2838072.321789322
[2025-12-03 09:46:01] 2025-12-03 14:45:27,731 | INFO     | intersect: -15289669859.224003
[2025-12-03 09:46:01] 2025-12-03 14:45:27,732 | INFO     | chi2: 4.8628255765894
[2025-12-03 09:46:01] 2025-12-03 14:45:27,732 | INFO     | sum of square deviations: 100978323931.04715
[2025-12-03 09:46:01] 2025-12-03 14:45:27,739 | INFO     | sum of deviations: 1088476501057.1024
[2025-12-03 09:46:01] 2025-12-03 14:45:27,739 | INFO     | mean x: 1764751833.6569767
[2025-12-03 09:46:01] 2025-12-03 14:45:27,739 | INFO     | mean y: 2851411.6656976743
[2025-12-03 09:46:01] 2025-12-03 14:45:27,740 | INFO     | intersect: -19019952952.216675
[2025-12-03 09:46:01] 2025-12-03 14:45:27,740 | INFO     | chi2: 2.331568109706893
[2025-12-03 09:46:01] 2025-12-03 14:45:27,740 | INFO     | current chi2=2.331568109706893 (change=52.05322352231754 %)
[2025-12-03 09:46:01] 2025-12-03 14:45:27,741 | INFO     | sum of square deviations: 98792678680.92276
[2025-12-03 09:46:01] 2025-12-03 14:45:27,748 | INFO     | sum of deviations: 1147282076151.0317
[2025-12-03 09:46:01] 2025-12-03 14:45:27,748 | INFO     | mean x: 1764751681.1581259
[2025-12-03 09:46:01] 2025-12-03 14:45:27,748 | INFO     | mean y: 2855500.8052708637
[2025-12-03 09:46:01] 2025-12-03 14:45:27,748 | INFO     | intersect: -20491253978.59575
[2025-12-03 09:46:01] 2025-12-03 14:45:27,749 | INFO     | chi2: 1.8845438769540517
[2025-12-03 09:46:01] 2025-12-03 14:45:27,749 | INFO     | current chi2=1.8845438769540517 (change=19.172686008689578 %)
[2025-12-03 09:46:01] 2025-12-03 14:45:27,749 | INFO     | right removable region: 682
[2025-12-03 09:46:01] 2025-12-03 14:45:27,750 | INFO     | sum of square deviations: 100978342229.6686
[2025-12-03 09:46:01] 2025-12-03 14:45:27,757 | INFO     | sum of deviations: 740667493707.5441
[2025-12-03 09:46:01] 2025-12-03 14:45:27,757 | INFO     | mean x: 1764752138.6540697
[2025-12-03 09:46:01] 2025-12-03 14:45:27,757 | INFO     | mean y: 2848607.2165697673
[2025-12-03 09:46:01] 2025-12-03 14:45:27,757 | INFO     | intersect: -12941457218.076517
[2025-12-03 09:46:01] 2025-12-03 14:45:27,758 | INFO     | chi2: 3.1523423341167285
[2025-12-03 09:46:01] 2025-12-03 14:45:27,758 | INFO     | current chi2=3.1523423341167285 (change=35.17467808648689 %)
[2025-12-03 09:46:01] 2025-12-03 14:45:27,758 | INFO     | sum of square deviations: 98792757367.46695
[2025-12-03 09:46:01] 2025-12-03 14:45:27,765 | INFO     | sum of deviations: 699954828639.7937
[2025-12-03 09:46:01] 2025-12-03 14:45:27,765 | INFO     | mean x: 1764752291.1508052
[2025-12-03 09:46:01] 2025-12-03 14:45:27,765 | INFO     | mean y: 2851448.0117130307
[2025-12-03 09:46:01] 2025-12-03 14:45:27,765 | INFO     | intersect: -12500563989.109383
[2025-12-03 09:46:01] 2025-12-03 14:45:27,766 | INFO     | chi2: 3.120165024907857
[2025-12-03 09:46:01] 2025-12-03 14:45:27,766 | INFO     | current chi2=3.120165024907857 (change=1.0207428571645671 %)
[2025-12-03 09:46:01] 2025-12-03 14:45:27,766 | INFO     | left removable region: 20
[2025-12-03 09:46:01] 2025-12-03 14:45:27,767 | INFO     | sum of square deviations: 89957440531.86714
[2025-12-03 09:46:01] 2025-12-03 14:45:27,773 | INFO     | sum of deviations: 873498018956.5475
[2025-12-03 09:46:01] 2025-12-03 14:45:27,773 | INFO     | mean x: 1764752260.6435046
[2025-12-03 09:46:01] 2025-12-03 14:45:27,773 | INFO     | mean y: 2874697.5574018126
[2025-12-03 09:46:01] 2025-12-03 14:45:27,773 | INFO     | intersect: -17133090871.350883
[2025-12-03 09:46:01] 2025-12-03 14:45:27,774 | INFO     | chi2: 0.08781202272517702
[2025-12-03 09:46:01] 2025-12-03 14:45:27,774 | INFO     | current memory leak: 9.71 B/s (using 662 data points, chi2=0.09)
[2025-12-03 09:46:01] 2025-12-03 14:45:27,774 | INFO     | could have reported an average CPU frequency of 2972 MHz (27 samples)
[2025-12-03 09:46:01] 2025-12-03 14:45:27,774 | INFO     | ..............................
[2025-12-03 09:46:01] 2025-12-03 14:45:27,774 | INFO     | . Timing measurements:
[2025-12-03 09:46:01] 2025-12-03 14:45:27,775 | INFO     | . get job = 0 s
[2025-12-03 09:46:01] 2025-12-03 14:45:27,775 | INFO     | . initial setup = 2 s
[2025-12-03 09:46:01] 2025-12-03 14:45:27,775 | INFO     | . payload setup = 5 s
[2025-12-03 09:46:01] 2025-12-03 14:45:27,775 | INFO     | . stage-in = 0 s
[2025-12-03 09:46:01] 2025-12-03 14:45:27,775 | INFO     | . payload execution = 42238 s
[2025-12-03 09:46:01] 2025-12-03 14:45:27,775 | INFO     | . stage-out = 3 s
[2025-12-03 09:46:01] 2025-12-03 14:45:27,775 | INFO     | . log creation = 0 s
[2025-12-03 09:46:01] 2025-12-03 14:45:27,775 | INFO     | ..............................
[2025-12-03 09:46:01] 2025-12-03 14:45:27,835 | INFO     | 
[2025-12-03 09:46:01] 2025-12-03 14:45:27,835 | INFO     | job summary report
[2025-12-03 09:46:01] 2025-12-03 14:45:27,835 | INFO     | --------------------------------------------------
[2025-12-03 09:46:01] 2025-12-03 14:45:27,835 | INFO     | PanDA job id: 6895340330
[2025-12-03 09:46:01] 2025-12-03 14:45:27,835 | INFO     | task id: 47556137
[2025-12-03 09:46:01] 2025-12-03 14:45:27,835 | INFO     | errors: (none)
[2025-12-03 09:46:01] 2025-12-03 14:45:27,835 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 09:46:01] 2025-12-03 14:45:27,835 | INFO     | pilot state: finished 
[2025-12-03 09:46:01] 2025-12-03 14:45:27,836 | INFO     | transexitcode: 0
[2025-12-03 09:46:01] 2025-12-03 14:45:27,836 | INFO     | exeerrorcode: 0
[2025-12-03 09:46:01] 2025-12-03 14:45:27,836 | INFO     | exeerrordiag: 
[2025-12-03 09:46:01] 2025-12-03 14:45:27,836 | INFO     | exitcode: 0
[2025-12-03 09:46:01] 2025-12-03 14:45:27,836 | INFO     | exitmsg: OK
[2025-12-03 09:46:01] 2025-12-03 14:45:27,836 | INFO     | cpuconsumptiontime: 331831 s
[2025-12-03 09:46:01] 2025-12-03 14:45:27,836 | INFO     | nevents: 1000
[2025-12-03 09:46:01] 2025-12-03 14:45:27,836 | INFO     | neventsw: 0
[2025-12-03 09:46:01] 2025-12-03 14:45:27,836 | INFO     | pid: 15828
[2025-12-03 09:46:01] 2025-12-03 14:45:27,837 | INFO     | pgrp: 15828
[2025-12-03 09:46:01] 2025-12-03 14:45:27,837 | INFO     | corecount: 8
[2025-12-03 09:46:01] 2025-12-03 14:45:27,837 | INFO     | event service: False
[2025-12-03 09:46:01] 2025-12-03 14:45:27,837 | INFO     | sizes: {0: 2284213, 4: 2284475, 11: 2284503, 42247: 2328813, 42252: 2337807, 42255: 2337863, 42259: 2338237}
[2025-12-03 09:46:01] 2025-12-03 14:45:27,837 | INFO     | --------------------------------------------------
[2025-12-03 09:46:01] 2025-12-03 14:45:27,837 | INFO     | 
[2025-12-03 09:46:01] 2025-12-03 14:45:27,838 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-03 09:46:01] 2025-12-03 14:45:27,855 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 09:46:01] 2025-12-03 14:45:27,856 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 09:46:01] 2025-12-03 14:45:27,856 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 09:46:01] 2025-12-03 14:45:27,856 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 09:46:01] 2025-12-03 14:45:27,856 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 09:46:01] 2025-12-03 14:45:27,856 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 09:46:01] 2025-12-03 14:45:27,856 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 09:46:01] 2025-12-03 14:45:27,856 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 09:46:01] 2025-12-03 14:45:27,856 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 09:46:01] 2025-12-03 14:45:27,856 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 09:46:01] 2025-12-03 14:45:27,856 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 09:46:01] 2025-12-03 14:45:27,856 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 09:46:01] 2025-12-03 14:45:27,857 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 09:46:01] 2025-12-03 14:45:27,857 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 09:46:01] 2025-12-03 14:45:27,857 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 09:46:01] 2025-12-03 14:45:27,857 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 09:46:01] 2025-12-03 14:45:27,857 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 09:46:01] 2025-12-03 14:45:27,857 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 09:46:01] 2025-12-03 14:45:27,857 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 09:46:01] 2025-12-03 14:45:27,857 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 09:46:01] 2025-12-03 14:45:27,857 | INFO     | job 6895340330 has completed (purged errors)
[2025-12-03 09:46:01] 2025-12-03 14:45:27,858 | INFO     | overall cleanup function is called
[2025-12-03 09:46:01] 2025-12-03 14:45:28,871 | INFO     | --- collectZombieJob: --- 10, [15828]
[2025-12-03 09:46:01] 2025-12-03 14:45:28,871 | INFO     | zombie collector waiting for pid 15828
[2025-12-03 09:46:01] 2025-12-03 14:45:28,871 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 09:46:01] 2025-12-03 14:45:28,871 | INFO     | collected zombie processes
[2025-12-03 09:46:01] 2025-12-03 14:45:28,872 | INFO     | will attempt to kill all subprocesses of pid=15828
[2025-12-03 09:46:01] 2025-12-03 14:45:29,043 | INFO     | process IDs to be killed: [15828] (in reverse order)
[2025-12-03 09:46:01] 2025-12-03 14:45:29,099 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 09:46:01] 2025-12-03 14:45:29,099 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 09:46:01] 2025-12-03 14:45:29,104 | INFO     | did not find any defunct processes belonging to 15828
[2025-12-03 09:46:01] 2025-12-03 14:45:29,108 | INFO     | did not find any defunct processes belonging to 15828
[2025-12-03 09:46:01] 2025-12-03 14:45:29,109 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 09:46:01] 2025-12-03 14:45:29,110 | INFO     | ready for new job
[2025-12-03 09:46:01] 2025-12-03 14:45:29,110 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 09:46:01] 2025-12-03 14:45:29,113 | INFO     | ***************************************
[2025-12-03 09:46:01] 2025-12-03 14:45:29,113 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 09:46:01] 2025-12-03 14:45:29,113 | INFO     | ***************************************
[2025-12-03 09:46:01] 2025-12-03 14:45:29,113 | INFO     | 
[2025-12-03 09:46:01] 2025-12-03 14:45:29,114 | INFO     | architecture information:
[2025-12-03 09:46:01] 2025-12-03 14:45:29,114 | INFO     | executing command: cat /etc/os-release
[2025-12-03 09:46:01] 2025-12-03 14:45:29,125 | INFO     | cat /etc/os-release:
[2025-12-03 09:46:01] NAME="CentOS Linux"
[2025-12-03 09:46:01] VERSION="7 (Core)"
[2025-12-03 09:46:01] ID="centos"
[2025-12-03 09:46:01] ID_LIKE="rhel fedora"
[2025-12-03 09:46:01] VERSION_ID="7"
[2025-12-03 09:46:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 09:46:01] ANSI_COLOR="0;31"
[2025-12-03 09:46:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 09:46:01] HOME_URL="https://www.centos.org/"
[2025-12-03 09:46:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 09:46:01] 
[2025-12-03 09:46:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 09:46:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 09:46:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 09:46:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 09:46:01] 
[2025-12-03 09:46:01] 2025-12-03 14:45:29,126 | INFO     | ***************************************
[2025-12-03 09:46:01] 2025-12-03 14:45:29,629 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-03 09:46:01] 2025-12-03 14:45:29,646 | INFO     | sufficient remaining disk space (105466822656 B)
[2025-12-03 09:46:01] 2025-12-03 14:45:29,646 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 09:46:01] 2025-12-03 14:45:29,646 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 09:46:01] 2025-12-03 14:45:29,646 | INFO     | update_server=False
[2025-12-03 09:46:01] 2025-12-03 14:45:29,646 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 09:46:01] 2025-12-03 14:45:29,646 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 09:46:01] 2025-12-03 14:45:29,647 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 09:46:01] 2025-12-03 14:45:29,671 | INFO     | all payload control threads have been joined
[2025-12-03 09:46:01] 2025-12-03 14:45:30,057 | INFO     | all data control threads have been joined
[2025-12-03 09:46:01] 2025-12-03 14:45:30,330 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 09:46:01] 2025-12-03 14:45:30,330 | INFO     | aborting loop
[2025-12-03 09:46:01] 2025-12-03 14:45:30,611 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 09:46:01] 2025-12-03 14:45:30,652 | INFO     | [job] retrieve thread has finished
[2025-12-03 09:46:01] 2025-12-03 14:45:30,652 | INFO     | [job] queue monitor thread has finished
[2025-12-03 09:46:01] 2025-12-03 14:45:30,677 | INFO     | [payload] control thread has finished
[2025-12-03 09:46:01] 2025-12-03 14:45:30,806 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 09:46:01] 2025-12-03 14:45:30,971 | INFO     | all job control threads have been joined
[2025-12-03 09:46:01] 2025-12-03 14:45:31,031 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 09:46:01] 2025-12-03 14:45:31,063 | INFO     | [data] control thread has finished
[2025-12-03 09:46:01] 2025-12-03 14:45:31,264 | INFO     | [job] validate thread has finished
[2025-12-03 09:46:01] 2025-12-03 14:45:31,335 | INFO     | [job] job monitor thread has finished
[2025-12-03 09:46:01] 2025-12-03 14:45:31,652 | INFO     | [data] copytool_out thread has finished
[2025-12-03 09:46:01] 2025-12-03 14:45:31,767 | INFO     | [data] copytool_in thread has finished
[2025-12-03 09:46:01] 2025-12-03 14:45:31,862 | INFO     | [payload] failed_post thread has finished
[2025-12-03 09:46:01] 2025-12-03 14:45:31,977 | INFO     | [job] control thread has finished
[2025-12-03 09:46:01] 2025-12-03 14:45:32,057 | INFO     | [payload] validate_post thread has finished
[2025-12-03 09:46:01] 2025-12-03 14:45:32,064 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 09:46:01] 2025-12-03 14:45:34,617 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 09:46:01] 2025-12-03 14:45:39,979 | INFO     | job.realtimelogging is not enabled
[2025-12-03 09:46:01] 2025-12-03 14:45:40,985 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 09:46:01] 2025-12-03 14:45:51,824 [wrapper] supervise_pilot (15 min periods counter: 48)
[2025-12-03 09:46:01] 2025-12-03 14:45:54,693 | INFO     | [monitor] cgroup control has ended
[2025-12-03 09:46:01] 2025-12-03 14:45:56,486 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140201907214144)>', '<ExcThread(monitor, started 140201456285440)>']
[2025-12-03 09:46:01] 2025-12-03 14:46:00,184 | INFO     | PID=9142 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-03 09:46:01] 2025-12-03 14:46:00,184 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 09:46:01] 2025-12-03 14:46:00,184 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 09:46:01] 2025-12-03 14:46:00,184 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 09:46:01] 2025-12-03 14:46:00,184 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 09:46:01] 2025-12-03 14:46:00,184 | INFO     | [monitor] control thread has ended
[2025-12-03 09:46:01] 2025-12-03 14:46:01,512 | INFO     | all workflow threads have been joined
[2025-12-03 09:46:01] 2025-12-03 14:46:01,513 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 09:46:01] 2025-12-03 14:46:01,513 | INFO     | traces error code: 0
[2025-12-03 09:46:01] 2025-12-03 14:46:01,514 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 09:46:01] 2025-12-03 14:46:01,621 [wrapper] ==== pilot stdout END ====
[2025-12-03 09:46:01] 2025-12-03 14:46:01,625 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 09:46:01] 2025-12-03 14:46:01,629 [wrapper] pilotpid: 9142
[2025-12-03 09:46:01] 2025-12-03 14:46:01,633 [wrapper] Pilot exit status: 0
[2025-12-03 09:46:01] 2025-12-03 14:46:01,645 [wrapper] pandaids: 6895340330
[2025-12-03 09:46:01] 2025-12-03 14:46:01,703 [wrapper] cleanup supervisor_pilot 38140 9143
[2025-12-03 09:46:01] 2025-12-03 14:46:01,706 [wrapper] Test setup, not cleaning
[2025-12-03 09:46:01] 2025-12-03 14:46:01,709 [wrapper] apfmon messages muted
[2025-12-03 09:46:01] 2025-12-03 14:46:01,712 [wrapper] ==== wrapper stdout END ====
[2025-12-03 09:46:01] 2025-12-03 14:46:01,714 [wrapper] ==== wrapper stderr END ====
[2025-12-03 09:46:01]  *** Error codes and diagnostics ***
[2025-12-03 09:46:01]     "exeErrorCode": 0,
[2025-12-03 09:46:01]     "exeErrorDiag": "",
[2025-12-03 09:46:01]     "pilotErrorCode": 0,
[2025-12-03 09:46:01]     "pilotErrorDiag": "",
[2025-12-03 09:46:01]  *** Listing of results directory ***
[2025-12-03 09:46:01] total 1318288
[2025-12-03 09:46:01] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 07:54 pilot3.tar.gz
[2025-12-03 09:46:01] -rwx------ 1 boincer umatlas     36292 Nov 22 07:59 runpilot2-wrapper.sh
[2025-12-03 09:46:01] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 07:59 queuedata.json
[2025-12-03 09:46:01] -rw-r--r-- 1 boincer umatlas       100 Dec  2 22:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 09:46:01] -rwxr-xr-x 1 boincer umatlas      7986 Dec  2 22:00 run_atlas
[2025-12-03 09:46:01] -rw-r--r-- 1 boincer umatlas       105 Dec  2 22:00 job.xml
[2025-12-03 09:46:01] -rw-r--r-- 2 boincer umatlas 408674325 Dec  2 22:00 EVNT.47483658._000378.pool.root.1
[2025-12-03 09:46:01] -rw-r--r-- 2 boincer umatlas     15847 Dec  2 22:00 start_atlas.sh
[2025-12-03 09:46:01] drwxrwx--x 2 boincer umatlas      4096 Dec  2 22:00 shared
[2025-12-03 09:46:01] -rw-r--r-- 2 boincer umatlas    590098 Dec  2 22:00 input.tar.gz
[2025-12-03 09:46:01] -rw-r--r-- 1 boincer umatlas         0 Dec  2 22:00 boinc_lockfile
[2025-12-03 09:46:01] -rw-r--r-- 1 boincer umatlas      2784 Dec  2 22:00 pandaJob.out
[2025-12-03 09:46:01] -rw------- 1 boincer umatlas        57 Dec  2 22:00 setup.sh.local
[2025-12-03 09:46:01] -rw------- 1 boincer umatlas    989292 Dec  2 22:00 agis_schedconf.cvmfs.json
[2025-12-03 09:46:01] drwx------ 5 boincer umatlas      4096 Dec  2 22:00 pilot3
[2025-12-03 09:46:01] -rw-r--r-- 1 boincer umatlas       532 Dec  3 09:36 boinc_task_state.xml
[2025-12-03 09:46:01] -rw------- 1 boincer umatlas 921685004 Dec  3 09:44 HITS.47556137._003745.pool.root.1
[2025-12-03 09:46:01] -rw------- 1 boincer umatlas      1063 Dec  3 09:45 memory_monitor_summary.json
[2025-12-03 09:46:01] -rw------- 1 boincer umatlas        95 Dec  3 09:45 pilot_heartbeat.json
[2025-12-03 09:46:01] -rw------- 1 boincer umatlas   1516240 Dec  3 09:45 agis_ddmendpoints.agis.ALL.json
[2025-12-03 09:46:01] -rw------- 1 boincer umatlas   1957183 Dec  3 09:45 log.47556137._003745.job.log.tgz.1
[2025-12-03 09:46:01] -rw------- 1 boincer umatlas      8650 Dec  3 09:45 heartbeat.json
[2025-12-03 09:46:01] -rw-r--r-- 1 boincer umatlas      6038 Dec  3 09:45 init_data.xml
[2025-12-03 09:46:01] -rw-r--r-- 1 boincer umatlas      8192 Dec  3 09:45 boinc_mmap_file
[2025-12-03 09:46:01] -rw-r--r-- 1 boincer umatlas        29 Dec  3 09:45 wrapper_checkpoint.txt
[2025-12-03 09:46:01] -rw------- 1 boincer umatlas      4818 Dec  3 09:46 pilotlog.txt
[2025-12-03 09:46:01] -rw------- 1 boincer umatlas   5871677 Dec  3 09:46 log.47556137._003745.job.log.1
[2025-12-03 09:46:01] -rw------- 1 boincer umatlas       353 Dec  3 09:46 output.list
[2025-12-03 09:46:01] -rw-r--r-- 1 boincer umatlas       620 Dec  3 09:46 runtime_log
[2025-12-03 09:46:01] -rw------- 1 boincer umatlas   7843840 Dec  3 09:46 result.tar.gz
[2025-12-03 09:46:01] -rw-r--r-- 1 boincer umatlas      9333 Dec  3 09:46 runtime_log.err
[2025-12-03 09:46:01] -rw------- 1 boincer umatlas       666 Dec  3 09:46 7wqMDmUO2g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmG7HKDmpmkqWn.diag
[2025-12-03 09:46:01] -rw-r--r-- 1 boincer umatlas     20997 Dec  3 09:46 stderr.txt
[2025-12-03 09:46:01] HITS file was successfully produced:
[2025-12-03 09:46:01] -rw------- 1 boincer umatlas 921685004 Dec  3 09:44 shared/HITS.pool.root.1
[2025-12-03 09:46:01]  *** Contents of shared directory: ***
[2025-12-03 09:46:01] total 1307444
[2025-12-03 09:46:01] -rw-r--r-- 2 boincer umatlas 408674325 Dec  2 22:00 ATLAS.root_0
[2025-12-03 09:46:01] -rw-r--r-- 2 boincer umatlas     15847 Dec  2 22:00 start_atlas.sh
[2025-12-03 09:46:01] -rw-r--r-- 2 boincer umatlas    590098 Dec  2 22:00 input.tar.gz
[2025-12-03 09:46:01] -rw------- 1 boincer umatlas 921685004 Dec  3 09:44 HITS.pool.root.1
[2025-12-03 09:46:01] -rw------- 1 boincer umatlas   7843840 Dec  3 09:46 result.tar.gz
09:46:03 (5256): run_atlas exited; CPU time 328415.287227
09:46:03 (5256): called boinc_finish(0)

</stderr_txt>
]]>

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