Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
18:45:46 (1903203): wrapper (7.7.26015): starting
18:45:46 (1903203): wrapper: running run_atlas (--nthreads 10)
[2025-12-07 18:45:46] Arguments: --nthreads 10
[2025-12-07 18:45:46] Threads: 10
[2025-12-07 18:45:46] Checking for CVMFS
[2025-12-07 18:45:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-07 18:45:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-07 18:45:46] Running cvmfs_config stat atlas.cern.ch
[2025-12-07 18:45:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-07 18:45:47] 2.13.3.0 8606 9185 63568 153749 1 101 3525623 4096001 9856 130560 0 29876197 99.972 1000390 676 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-12-07 18:45:47] CVMFS is ok
[2025-12-07 18:45:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-07 18:45:47] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-07 18:45:47] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-07 18:45:47] Further information can be found at the LHC@home message board.
[2025-12-07 18:45:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-07 18:45:47] Checking for apptainer binary...
[2025-12-07 18:45:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-07 18:45:47] Running /usr/bin/apptainer --version
[2025-12-07 18:45:47] apptainer version 1.4.2
[2025-12-07 18:45:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-07 18:45:47] 3950x-linux
[2025-12-07 18:45:47] apptainer works
[2025-12-07 18:45:47] Set ATHENA_PROC_NUMBER=10
[2025-12-07 18:45:47] Set ATHENA_CORE_NUMBER=10
[2025-12-07 18:45:47] Starting ATLAS job with PandaID=6895375049
[2025-12-07 18:45:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc241/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-08 16:13:40]  *** The last 200 lines of the pilot log: ***
[2025-12-08 16:13:40] 2025-12-09 00:12:53,289 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-08 16:13:40] 2025-12-09 00:12:54,891 | INFO     | time since job start (77192s) is within the limit (172800.0s)
[2025-12-08 16:13:40] 2025-12-09 00:12:55,792 | INFO     | monitor loop #5033: job 0:6895375049 is in state 'finished'
[2025-12-08 16:13:40] 2025-12-09 00:12:55,792 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-08 16:13:40] 2025-12-09 00:12:56,897 | INFO     | time since job start (77194s) is within the limit (172800.0s)
[2025-12-08 16:13:40] 2025-12-09 00:12:58,295 | INFO     | monitor loop #5034: job 0:6895375049 is in state 'finished'
[2025-12-08 16:13:40] 2025-12-09 00:12:58,295 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-08 16:13:40] 2025-12-09 00:12:58,902 | INFO     | time since job start (77196s) is within the limit (172800.0s)
[2025-12-08 16:13:40] 2025-12-09 00:13:00,588 | INFO     | PID=1907077 has CPU usage=12.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-12-08 16:13:40] 2025-12-09 00:13:00,588 | INFO     | .. there are 12 such processes running
[2025-12-08 16:13:40] 2025-12-09 00:13:00,803 | INFO     | monitor loop #5035: job 0:6895375049 is in state 'finished'
[2025-12-08 16:13:40] 2025-12-09 00:13:00,803 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-08 16:13:40] 2025-12-09 00:13:01,589 | INFO     | time since job start (77199s) is within the limit (172800.0s)
[2025-12-08 16:13:40] 2025-12-09 00:13:03,306 | INFO     | monitor loop #5036: job 0:6895375049 is in state 'finished'
[2025-12-08 16:13:40] 2025-12-09 00:13:03,307 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-08 16:13:40] 2025-12-09 00:13:03,594 | INFO     | time since job start (77201s) is within the limit (172800.0s)
[2025-12-08 16:13:40] 2025-12-09 00:13:05,184 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-08 16:13:40] 2025-12-09 00:13:05,199 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3400.12525
[2025-12-08 16:13:40] 2025-12-09 00:13:05,213 | INFO     | using path: /var/lib/multiboinc/boinc241/slots/1/PanDA_Pilot-6895375049/memory_monitor_summary.json (trf name=prmon)
[2025-12-08 16:13:40] 2025-12-09 00:13:05,213 | INFO     | extracted standard info from prmon json
[2025-12-08 16:13:40] 2025-12-09 00:13:05,214 | INFO     | extracted standard memory fields from prmon json
[2025-12-08 16:13:40] 2025-12-09 00:13:05,214 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-08 16:13:40] 2025-12-09 00:13:05,258 | INFO     | fitting pss+swap vs Time
[2025-12-08 16:13:40] 2025-12-09 00:13:05,260 | INFO     | sum of square deviations: 626206595015.0096
[2025-12-08 16:13:40] 2025-12-09 00:13:05,356 | INFO     | sum of deviations: 2752107325703.0293
[2025-12-08 16:13:40] 2025-12-09 00:13:05,356 | INFO     | mean x: 1765200581.175633
[2025-12-08 16:13:40] 2025-12-09 00:13:05,356 | INFO     | mean y: 3134680.806170886
[2025-12-08 16:13:40] 2025-12-09 00:13:05,357 | INFO     | intersect: -7754722693.200345
[2025-12-08 16:13:40] 2025-12-09 00:13:05,358 | INFO     | chi2: 14.174172283256222
[2025-12-08 16:13:40] 2025-12-09 00:13:05,368 | INFO     | sum of square deviations: 618806087147.1906
[2025-12-08 16:13:40] 2025-12-09 00:13:05,469 | INFO     | sum of deviations: 3211113405737.019
[2025-12-08 16:13:40] 2025-12-09 00:13:05,469 | INFO     | mean x: 1765200428.6902304
[2025-12-08 16:13:40] 2025-12-09 00:13:05,469 | INFO     | mean y: 3144136.9205718823
[2025-12-08 16:13:40] 2025-12-09 00:13:05,469 | INFO     | intersect: -9156847786.416256
[2025-12-08 16:13:40] 2025-12-09 00:13:05,470 | INFO     | chi2: 10.983243168738579
[2025-12-08 16:13:40] 2025-12-09 00:13:05,480 | INFO     | current chi2=10.983243168738579 (change=22.51227832391349 %)
[2025-12-08 16:13:40] 2025-12-09 00:13:05,480 | INFO     | right removable region: 1258
[2025-12-08 16:13:40] 2025-12-09 00:13:05,481 | INFO     | sum of square deviations: 618803253087.1907
[2025-12-08 16:13:40] 2025-12-09 00:13:05,552 | INFO     | sum of deviations: 2264735862119.2505
[2025-12-08 16:13:40] 2025-12-09 00:13:05,552 | INFO     | mean x: 1765200733.6902304
[2025-12-08 16:13:40] 2025-12-09 00:13:05,553 | INFO     | mean y: 3144717.890389198
[2025-12-08 16:13:40] 2025-12-09 00:13:05,553 | INFO     | intersect: -6457250222.63878
[2025-12-08 16:13:40] 2025-12-09 00:13:05,554 | INFO     | chi2: 10.981429629896125
[2025-12-08 16:13:40] 2025-12-09 00:13:05,554 | INFO     | current chi2=10.981429629896125 (change=22.525072995843615 %)
[2025-12-08 16:13:40] 2025-12-09 00:13:05,554 | INFO     | left removable region: 10
[2025-12-08 16:13:40] 2025-12-09 00:13:05,558 | INFO     | sum of square deviations: 602725712811.5868
[2025-12-08 16:13:40] 2025-12-09 00:13:05,606 | INFO     | time since job start (77203s) is within the limit (172800.0s)
[2025-12-08 16:13:40] 2025-12-09 00:13:05,612 | INFO     | sum of deviations: 2565517552762.0547
[2025-12-08 16:13:40] 2025-12-09 00:13:05,612 | INFO     | mean x: 1765200703.2163463
[2025-12-08 16:13:40] 2025-12-09 00:13:05,612 | INFO     | mean y: 3161196.840544872
[2025-12-08 16:13:40] 2025-12-09 00:13:05,612 | INFO     | intersect: -7510461155.7288475
[2025-12-08 16:13:40] 2025-12-09 00:13:05,613 | INFO     | chi2: 6.353295679986855
[2025-12-08 16:13:40] 2025-12-09 00:13:05,613 | INFO     | current memory leak: 4.26 B/s (using 1248 data points, chi2=6.35)
[2025-12-08 16:13:40] 2025-12-09 00:13:05,614 | INFO     | could have reported an average CPU frequency of 3400 MHz (46 samples)
[2025-12-08 16:13:40] 2025-12-09 00:13:05,614 | INFO     | ..............................
[2025-12-08 16:13:40] 2025-12-09 00:13:05,614 | INFO     | . Timing measurements:
[2025-12-08 16:13:40] 2025-12-09 00:13:05,614 | INFO     | . get job = 0 s
[2025-12-08 16:13:40] 2025-12-09 00:13:05,614 | INFO     | . initial setup = 5 s
[2025-12-08 16:13:40] 2025-12-09 00:13:05,614 | INFO     | . payload setup = 19 s
[2025-12-08 16:13:40] 2025-12-09 00:13:05,614 | INFO     | . stage-in = 0 s
[2025-12-08 16:13:40] 2025-12-09 00:13:05,614 | INFO     | . payload execution = 77117 s
[2025-12-08 16:13:40] 2025-12-09 00:13:05,614 | INFO     | . stage-out = 6 s
[2025-12-08 16:13:40] 2025-12-09 00:13:05,614 | INFO     | . log creation = 2 s
[2025-12-08 16:13:40] 2025-12-09 00:13:05,615 | INFO     | ..............................
[2025-12-08 16:13:40] 2025-12-09 00:13:05,706 | INFO     | 
[2025-12-08 16:13:40] 2025-12-09 00:13:05,706 | INFO     | job summary report
[2025-12-08 16:13:40] 2025-12-09 00:13:05,706 | INFO     | --------------------------------------------------
[2025-12-08 16:13:40] 2025-12-09 00:13:05,706 | INFO     | PanDA job id: 6895375049
[2025-12-08 16:13:40] 2025-12-09 00:13:05,706 | INFO     | task id: 47556137
[2025-12-08 16:13:40] 2025-12-09 00:13:05,707 | INFO     | errors: (none)
[2025-12-08 16:13:40] 2025-12-09 00:13:05,707 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-08 16:13:40] 2025-12-09 00:13:05,707 | INFO     | pilot state: finished 
[2025-12-08 16:13:40] 2025-12-09 00:13:05,707 | INFO     | transexitcode: 0
[2025-12-08 16:13:40] 2025-12-09 00:13:05,707 | INFO     | exeerrorcode: 0
[2025-12-08 16:13:40] 2025-12-09 00:13:05,707 | INFO     | exeerrordiag: 
[2025-12-08 16:13:40] 2025-12-09 00:13:05,707 | INFO     | exitcode: 0
[2025-12-08 16:13:40] 2025-12-09 00:13:05,707 | INFO     | exitmsg: OK
[2025-12-08 16:13:40] 2025-12-09 00:13:05,707 | INFO     | cpuconsumptiontime: 210478 s
[2025-12-08 16:13:40] 2025-12-09 00:13:05,707 | INFO     | nevents: 1000
[2025-12-08 16:13:40] 2025-12-09 00:13:05,707 | INFO     | neventsw: 0
[2025-12-08 16:13:40] 2025-12-09 00:13:05,707 | INFO     | pid: 1915935
[2025-12-08 16:13:40] 2025-12-09 00:13:05,707 | INFO     | pgrp: 1915935
[2025-12-08 16:13:40] 2025-12-09 00:13:05,707 | INFO     | corecount: 10
[2025-12-08 16:13:40] 2025-12-09 00:13:05,707 | INFO     | event service: False
[2025-12-08 16:13:40] 2025-12-09 00:13:05,708 | INFO     | sizes: {0: 2284157, 1: 2284356, 12: 2284356, 17: 2284646, 23: 2284674, 77141: 2348048, 77149: 2357070, 77150: 2357126, 77164: 2357372}
[2025-12-08 16:13:40] 2025-12-09 00:13:05,708 | INFO     | --------------------------------------------------
[2025-12-08 16:13:40] 2025-12-09 00:13:05,708 | INFO     | 
[2025-12-08 16:13:40] 2025-12-09 00:13:05,708 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc241/slots/1
[2025-12-08 16:13:40] 2025-12-09 00:13:05,753 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-08 16:13:40] 2025-12-09 00:13:05,754 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-08 16:13:40] 2025-12-09 00:13:05,754 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-08 16:13:40] 2025-12-09 00:13:05,754 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-08 16:13:40] 2025-12-09 00:13:05,754 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-08 16:13:40] 2025-12-09 00:13:05,754 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-08 16:13:40] 2025-12-09 00:13:05,754 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-08 16:13:40] 2025-12-09 00:13:05,754 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-08 16:13:40] 2025-12-09 00:13:05,754 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-08 16:13:40] 2025-12-09 00:13:05,754 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-08 16:13:40] 2025-12-09 00:13:05,754 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-08 16:13:40] 2025-12-09 00:13:05,755 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-08 16:13:40] 2025-12-09 00:13:05,755 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-08 16:13:40] 2025-12-09 00:13:05,755 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-08 16:13:40] 2025-12-09 00:13:05,755 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-08 16:13:40] 2025-12-09 00:13:05,755 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-08 16:13:40] 2025-12-09 00:13:05,755 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-08 16:13:40] 2025-12-09 00:13:05,755 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-08 16:13:40] 2025-12-09 00:13:05,755 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-08 16:13:40] 2025-12-09 00:13:05,755 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-08 16:13:40] 2025-12-09 00:13:05,755 | INFO     | job 6895375049 has completed (purged errors)
[2025-12-08 16:13:40] 2025-12-09 00:13:05,755 | INFO     | overall cleanup function is called
[2025-12-08 16:13:40] 2025-12-09 00:13:06,789 | INFO     | --- collectZombieJob: --- 10, [1915935]
[2025-12-08 16:13:40] 2025-12-09 00:13:06,790 | INFO     | zombie collector waiting for pid 1915935
[2025-12-08 16:13:40] 2025-12-09 00:13:06,790 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-08 16:13:40] 2025-12-09 00:13:06,790 | INFO     | collected zombie processes
[2025-12-08 16:13:40] 2025-12-09 00:13:06,790 | INFO     | will attempt to kill all subprocesses of pid=1915935
[2025-12-08 16:13:40] 2025-12-09 00:13:07,457 | INFO     | process IDs to be killed: [1915935] (in reverse order)
[2025-12-08 16:13:40] 2025-12-09 00:13:07,691 | WARNING  | found no corresponding commands to process id(s)
[2025-12-08 16:13:40] 2025-12-09 00:13:07,692 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-08 16:13:40] 2025-12-09 00:13:07,715 | INFO     | did not find any defunct processes belonging to 1915935
[2025-12-08 16:13:40] 2025-12-09 00:13:07,748 | INFO     | did not find any defunct processes belonging to 1915935
[2025-12-08 16:13:40] 2025-12-09 00:13:07,757 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-08 16:13:40] 2025-12-09 00:13:07,757 | INFO     | ready for new job
[2025-12-08 16:13:40] 2025-12-09 00:13:07,757 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-08 16:13:40] 2025-12-09 00:13:07,767 | INFO     | ***************************************
[2025-12-08 16:13:40] 2025-12-09 00:13:07,767 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-08 16:13:40] 2025-12-09 00:13:07,767 | INFO     | ***************************************
[2025-12-08 16:13:40] 2025-12-09 00:13:07,767 | INFO     | 
[2025-12-08 16:13:40] 2025-12-09 00:13:07,773 | INFO     | architecture information:
[2025-12-08 16:13:40] 2025-12-09 00:13:07,776 | INFO     | executing command: cat /etc/os-release
[2025-12-08 16:13:40] 2025-12-09 00:13:07,846 | INFO     | cat /etc/os-release:
[2025-12-08 16:13:40] NAME="CentOS Linux"
[2025-12-08 16:13:40] VERSION="7 (Core)"
[2025-12-08 16:13:40] ID="centos"
[2025-12-08 16:13:40] ID_LIKE="rhel fedora"
[2025-12-08 16:13:40] VERSION_ID="7"
[2025-12-08 16:13:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-08 16:13:40] ANSI_COLOR="0;31"
[2025-12-08 16:13:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-08 16:13:40] HOME_URL="https://www.centos.org/"
[2025-12-08 16:13:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-08 16:13:40] 
[2025-12-08 16:13:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-08 16:13:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-08 16:13:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-08 16:13:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-08 16:13:40] 
[2025-12-08 16:13:40] 2025-12-09 00:13:07,846 | INFO     | ***************************************
[2025-12-08 16:13:40] 2025-12-09 00:13:08,355 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc241/slots/1
[2025-12-08 16:13:40] 2025-12-09 00:13:08,405 | INFO     | sufficient remaining disk space (68998397952 B)
[2025-12-08 16:13:40] 2025-12-09 00:13:08,405 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-08 16:13:40] 2025-12-09 00:13:08,406 | INFO     | current server update state: UPDATING_FINAL
[2025-12-08 16:13:40] 2025-12-09 00:13:08,406 | INFO     | update_server=False
[2025-12-08 16:13:40] 2025-12-09 00:13:08,406 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-08 16:13:40] 2025-12-09 00:13:08,423 | INFO     | all data control threads have been joined
[2025-12-08 16:13:40] 2025-12-09 00:13:09,101 | INFO     | all job control threads have been joined
[2025-12-08 16:13:40] 2025-12-09 00:13:09,105 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-08 16:13:40] 2025-12-09 00:13:09,341 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-08 16:13:40] 2025-12-09 00:13:09,341 | INFO     | aborting loop
[2025-12-08 16:13:40] 2025-12-09 00:13:09,411 | INFO     | [job] retrieve thread has finished
[2025-12-08 16:13:40] 2025-12-09 00:13:09,420 | INFO     | [payload] execute_payloads thread has finished
[2025-12-08 16:13:40] 2025-12-09 00:13:09,428 | INFO     | [data] control thread has finished
[2025-12-08 16:13:40] 2025-12-09 00:13:09,503 | INFO     | all payload control threads have been joined
[2025-12-08 16:13:40] 2025-12-09 00:13:09,616 | INFO     | [payload] validate_pre thread has finished
[2025-12-08 16:13:40] 2025-12-09 00:13:09,897 | INFO     | [payload] validate_post thread has finished
[2025-12-08 16:13:40] 2025-12-09 00:13:10,007 | INFO     | [payload] failed_post thread has finished
[2025-12-08 16:13:40] 2025-12-09 00:13:10,083 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-08 16:13:40] 2025-12-09 00:13:10,107 | INFO     | [job] control thread has finished
[2025-12-08 16:13:40] 2025-12-09 00:13:10,215 | INFO     | [job] validate thread has finished
[2025-12-08 16:13:40] 2025-12-09 00:13:10,346 | INFO     | [job] job monitor thread has finished
[2025-12-08 16:13:40] 2025-12-09 00:13:10,459 | INFO     | [data] copytool_in thread has finished
[2025-12-08 16:13:40] 2025-12-09 00:13:10,509 | INFO     | [payload] control thread has finished
[2025-12-08 16:13:40] 2025-12-09 00:13:10,517 | INFO     | [job] create_data_payload thread has finished
[2025-12-08 16:13:40] 2025-12-09 00:13:10,715 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-08 16:13:40] 2025-12-09 00:13:10,752 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-08 16:13:40] 2025-12-09 00:13:11,110 | INFO     | [data] copytool_out thread has finished
[2025-12-08 16:13:40] 2025-12-09 00:13:11,722 | INFO     | [job] queue monitor thread has finished
[2025-12-08 16:13:40] 2025-12-09 00:13:14,760 | INFO     | [data] queue_monitor thread has finished
[2025-12-08 16:13:40] 2025-12-09 00:13:30,777 | INFO     | [monitor] cgroup control has ended
[2025-12-08 16:13:40] 2025-12-09 00:13:31,179 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136067457054528)>', '<ExcThread(monitor, started 136066442983168)>']
[2025-12-08 16:13:40] 2025-12-09 00:13:36,203 | INFO     | all workflow threads have been joined
[2025-12-08 16:13:40] 2025-12-09 00:13:36,204 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-08 16:13:40] 2025-12-09 00:13:36,204 | INFO     | traces error code: 0
[2025-12-08 16:13:40] 2025-12-09 00:13:36,204 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-08 16:13:40] 2025-12-09 00:13:39,479 | INFO     | PID=1907077 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-08 16:13:40] 2025-12-09 00:13:39,483 | INFO     | .. there are 12 such processes running
[2025-12-08 16:13:40] 2025-12-09 00:13:39,483 | INFO     | found 0 job(s) in 20 queues
[2025-12-08 16:13:40] 2025-12-09 00:13:39,483 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-08 16:13:40] 2025-12-09 00:13:39,487 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-08 16:13:40] 2025-12-09 00:13:39,487 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-08 16:13:40] 2025-12-09 00:13:39,487 | INFO     | [monitor] control thread has ended
[2025-12-08 16:13:40] 2025-12-09 00:13:39,896 [wrapper] ==== pilot stdout END ====
[2025-12-08 16:13:40] 2025-12-09 00:13:39,906 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-08 16:13:40] 2025-12-09 00:13:39,913 [wrapper] pilotpid: 1907077
[2025-12-08 16:13:40] 2025-12-09 00:13:39,926 [wrapper] Pilot exit status: 0
[2025-12-08 16:13:40] 2025-12-09 00:13:39,984 [wrapper] pandaids: 6895375049
[2025-12-08 16:13:40] 2025-12-09 00:13:40,180 [wrapper] cleanup supervisor_pilot 3319223 1907078
[2025-12-08 16:13:40] 2025-12-09 00:13:40,195 [wrapper] Test setup, not cleaning
[2025-12-08 16:13:40] 2025-12-09 00:13:40,214 [wrapper] apfmon messages muted
[2025-12-08 16:13:40] 2025-12-09 00:13:40,222 [wrapper] ==== wrapper stdout END ====
[2025-12-08 16:13:40] 2025-12-09 00:13:40,238 [wrapper] ==== wrapper stderr END ====
[2025-12-08 16:13:40]  *** Error codes and diagnostics ***
[2025-12-08 16:13:40]     "exeErrorCode": 0,
[2025-12-08 16:13:40]     "exeErrorDiag": "",
[2025-12-08 16:13:40]     "pilotErrorCode": 0,
[2025-12-08 16:13:40]     "pilotErrorDiag": "",
[2025-12-08 16:13:40]  *** Listing of results directory ***
[2025-12-08 16:13:40] total 1334672
[2025-12-08 16:13:40] -rw-r--r-- 1 root root    576529 Nov 23 15:11 pilot3.tar.gz
[2025-12-08 16:13:40] -rwx------ 1 4871 1028     36292 Nov 23 15:52 runpilot2-wrapper.sh
[2025-12-08 16:13:40] -rw-r--r-- 1 root root      5112 Nov 23 15:52 queuedata.json
[2025-12-08 16:13:40] -rw-r--r-- 1 root root       100 Dec  7 18:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-08 16:13:40] -rwxr-xr-x 1 root root      7986 Dec  7 18:45 run_atlas
[2025-12-08 16:13:40] -rw-r--r-- 1 root root       105 Dec  7 18:45 job.xml
[2025-12-08 16:13:40] -rw-r--r-- 2 root root 410465527 Dec  7 18:45 EVNT.47483658._000952.pool.root.1
[2025-12-08 16:13:40] drwxrwx--x 2 root root      4096 Dec  7 18:45 shared
[2025-12-08 16:13:40] -rw-r--r-- 2 root root    590097 Dec  7 18:45 input.tar.gz
[2025-12-08 16:13:40] -rw-r--r-- 2 root root     15847 Dec  7 18:45 start_atlas.sh
[2025-12-08 16:13:40] -rw-r--r-- 1 root root         0 Dec  7 18:45 boinc_setup_complete
[2025-12-08 16:13:40] -rw-r--r-- 1 root root      9236 Dec  7 18:45 init_data.xml
[2025-12-08 16:13:40] -rw-r--r-- 1 root root         0 Dec  7 18:45 boinc_lockfile
[2025-12-08 16:13:40] -rw-r--r-- 1 root root      2785 Dec  7 18:45 pandaJob.out
[2025-12-08 16:13:40] -rw------- 1 root root    981493 Dec  7 18:46 agis_schedconf.cvmfs.json
[2025-12-08 16:13:40] drwxr-xr-x 5  320  320      4096 Dec  7 18:46 pilot3
[2025-12-08 16:13:40] -rw-r--r-- 1 root root       533 Dec  8 15:45 boinc_task_state.xml
[2025-12-08 16:13:40] -rw------- 1 root root 926056252 Dec  8 16:11 HITS.47556137._009382.pool.root.1
[2025-12-08 16:13:40] -rw------- 1 root root      1043 Dec  8 16:12 memory_monitor_summary.json
[2025-12-08 16:13:40] -rw------- 1 root root   1516240 Dec  8 16:12 agis_ddmendpoints.agis.ALL.json
[2025-12-08 16:13:40] -rw------- 1 root root   2598222 Dec  8 16:12 log.47556137._009382.job.log.tgz.1
[2025-12-08 16:13:40] -rw------- 1 root root      8591 Dec  8 16:13 heartbeat.json
[2025-12-08 16:13:40] -rw-r--r-- 1 root root      8192 Dec  8 16:13 boinc_mmap_file
[2025-12-08 16:13:40] -rw-r--r-- 1 root root        29 Dec  8 16:13 wrapper_checkpoint.txt
[2025-12-08 16:13:40] -rw------- 1 root root        95 Dec  8 16:13 pilot_heartbeat.json
[2025-12-08 16:13:40] -rw------- 1 root root       823 Dec  8 16:13 pilotlog.txt
[2025-12-08 16:13:40] -rw------- 1 root root  10538754 Dec  8 16:13 log.47556137._009382.job.log.1
[2025-12-08 16:13:40] -rw------- 1 root root       353 Dec  8 16:13 output.list
[2025-12-08 16:13:40] -rw-r--r-- 1 root root       620 Dec  8 16:13 runtime_log
[2025-12-08 16:13:40] -rw------- 1 root root  13158400 Dec  8 16:13 result.tar.gz
[2025-12-08 16:13:40] -rw-r--r-- 1 root root      9021 Dec  8 16:13 runtime_log.err
[2025-12-08 16:13:40] -rw------- 1 root root       658 Dec  8 16:13 hcXMDmr3Yh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmKILKDmQpnKLm.diag
[2025-12-08 16:13:40] -rw-r--r-- 1 root root     21971 Dec  8 16:13 stderr.txt
[2025-12-08 16:13:40] HITS file was successfully produced:
[2025-12-08 16:13:40] -rw------- 1 root root 926056252 Dec  8 16:11 shared/HITS.pool.root.1
[2025-12-08 16:13:40]  *** Contents of shared directory: ***
[2025-12-08 16:13:40] total 1318656
[2025-12-08 16:13:40] -rw-r--r-- 2 root root 410465527 Dec  7 18:45 ATLAS.root_0
[2025-12-08 16:13:40] -rw-r--r-- 2 root root    590097 Dec  7 18:45 input.tar.gz
[2025-12-08 16:13:40] -rw-r--r-- 2 root root     15847 Dec  7 18:45 start_atlas.sh
[2025-12-08 16:13:40] -rw------- 1 root root 926056252 Dec  8 16:11 HITS.pool.root.1
[2025-12-08 16:13:40] -rw------- 1 root root  13158400 Dec  8 16:13 result.tar.gz
16:13:41 (1903203): run_atlas exited; CPU time 210525.656643
16:13:41 (1903203): called boinc_finish(0)

</stderr_txt>
]]>

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