Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:23:03 (3927743): wrapper (7.7.26015): starting
23:23:03 (3927743): wrapper: running run_atlas (--nthreads 8)
[2025-12-02 23:23:03] Arguments: --nthreads 8
[2025-12-02 23:23:03] Threads: 8
[2025-12-02 23:23:03] Checking for CVMFS
[2025-12-02 23:23:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 23:23:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 23:23:03] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 23:23:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 23:23:03] 2.13.3.0 12357 39598 296684 153581 1 169 27075006 32503808 37380 16776704 0 633791700 99.627 567693792 45258 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-02 23:23:03] CVMFS is ok
[2025-12-02 23:23:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 23:23:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 23:23:03] Further information can be found at the LHC@home message board.
[2025-12-02 23:23:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 23:23:03] Checking for apptainer binary...
[2025-12-02 23:23:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 23:23:03] Running /usr/bin/apptainer --version
[2025-12-02 23:23:03] apptainer version 1.4.4-1.el9
[2025-12-02 23:23:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 23:23:04] c8-7-2.aglt2.org
[2025-12-02 23:23:04] apptainer works
[2025-12-02 23:23:04] Set ATHENA_PROC_NUMBER=8
[2025-12-02 23:23:04] Set ATHENA_CORE_NUMBER=8
[2025-12-02 23:23:04] Starting ATLAS job with PandaID=6912027440
[2025-12-02 23:23:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 00:47:07]  *** The last 200 lines of the pilot log: ***
[2025-12-03 00:47:07] 2025-12-03 05:29:14,237 | INFO     | .. there are 59 such processes running
[2025-12-03 00:47:07] 2025-12-03 05:29:15,240 | INFO     | time since job start (3942s) is within the limit (172800.0s)
[2025-12-03 00:47:07] 2025-12-03 05:29:16,529 | INFO     | monitor loop #240: job 0:6912027440 is in state 'finished'
[2025-12-03 00:47:07] 2025-12-03 05:29:16,529 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 00:47:07] 2025-12-03 05:29:17,247 | INFO     | time since job start (3944s) is within the limit (172800.0s)
[2025-12-03 00:47:07] 2025-12-03 05:29:19,035 | INFO     | monitor loop #241: job 0:6912027440 is in state 'finished'
[2025-12-03 00:47:07] 2025-12-03 05:29:19,035 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 00:47:07] 2025-12-03 05:29:19,254 | INFO     | time since job start (3946s) is within the limit (172800.0s)
[2025-12-03 00:47:07] 2025-12-03 05:29:21,260 | INFO     | time since job start (3948s) is within the limit (172800.0s)
[2025-12-03 00:47:07] 2025-12-03 05:29:21,540 | INFO     | monitor loop #242: job 0:6912027440 is in state 'finished'
[2025-12-03 00:47:07] 2025-12-03 05:29:21,540 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 00:47:07] 2025-12-03 05:29:23,289 | INFO     | time since job start (3950s) is within the limit (172800.0s)
[2025-12-03 00:47:07] 2025-12-03 05:29:24,046 | INFO     | monitor loop #243: job 0:6912027440 is in state 'finished'
[2025-12-03 00:47:07] 2025-12-03 05:29:24,046 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 00:47:07] 2025-12-03 05:29:25,301 | INFO     | time since job start (3952s) is within the limit (172800.0s)
[2025-12-03 00:47:07] 2025-12-03 05:29:26,551 | INFO     | monitor loop #244: job 0:6912027440 is in state 'finished'
[2025-12-03 00:47:07] 2025-12-03 05:29:26,551 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 00:47:07] 2025-12-03 05:29:27,309 | INFO     | time since job start (3954s) is within the limit (172800.0s)
[2025-12-03 00:47:07] 2025-12-03 05:29:29,056 | INFO     | monitor loop #245: job 0:6912027440 is in state 'finished'
[2025-12-03 00:47:07] 2025-12-03 05:29:29,056 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 00:47:07] 2025-12-03 05:29:29,316 | INFO     | time since job start (3956s) is within the limit (172800.0s)
[2025-12-03 00:47:07] 2025-12-03 05:29:31,338 | INFO     | time since job start (3958s) is within the limit (172800.0s)
[2025-12-03 00:47:07] 2025-12-03 05:29:31,576 | INFO     | monitor loop #246: job 0:6912027440 is in state 'finished'
[2025-12-03 00:47:07] 2025-12-03 05:29:31,576 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 00:47:07] 2025-12-03 05:29:33,345 | INFO     | time since job start (3960s) is within the limit (172800.0s)
[2025-12-03 00:47:07] 2025-12-03 05:29:34,081 | INFO     | monitor loop #247: job 0:6912027440 is in state 'finished'
[2025-12-03 00:47:07] 2025-12-03 05:29:34,081 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 00:47:07] 2025-12-03 05:29:35,352 | INFO     | time since job start (3962s) is within the limit (172800.0s)
[2025-12-03 00:47:07] 2025-12-03 05:29:36,610 | INFO     | monitor loop #248: job 0:6912027440 is in state 'finished'
[2025-12-03 00:47:07] 2025-12-03 05:29:36,610 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 00:47:07] 2025-12-03 05:29:39,129 | INFO     | monitor loop #249: job 0:6912027440 is in state 'finished'
[2025-12-03 00:47:07] 2025-12-03 05:29:39,131 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 00:47:07] 2025-12-03 05:29:39,480 | INFO     | PID=3936504 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-03 00:47:07] 2025-12-03 05:29:39,480 | INFO     | .. there are 59 such processes running
[2025-12-03 00:47:07] 2025-12-03 05:29:39,726 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-03 00:47:07] 2025-12-03 05:29:39,735 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9934687499986
[2025-12-03 00:47:07] 2025-12-03 05:29:39,767 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6912027440/memory_monitor_summary.json (trf name=prmon)
[2025-12-03 00:47:07] 2025-12-03 05:29:39,768 | INFO     | extracted standard info from prmon json
[2025-12-03 00:47:07] 2025-12-03 05:29:39,768 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 00:47:07] 2025-12-03 05:29:39,768 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 00:47:07] 2025-12-03 05:29:39,769 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-03 00:47:07] 2025-12-03 05:29:39,769 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-03 00:47:07] 2025-12-03 05:29:39,770 | INFO     | fitting pss+swap vs Time
[2025-12-03 00:47:07] 2025-12-03 05:29:39,770 | INFO     | sum of square deviations: 57412354.14035088
[2025-12-03 00:47:07] 2025-12-03 05:29:39,770 | INFO     | sum of deviations: -3507780921.6842103
[2025-12-03 00:47:07] 2025-12-03 05:29:39,770 | INFO     | mean x: 1764737896.122807
[2025-12-03 00:47:07] 2025-12-03 05:29:39,770 | INFO     | mean y: 2931259.5263157897
[2025-12-03 00:47:07] 2025-12-03 05:29:39,770 | INFO     | intersect: 107824915159.71275
[2025-12-03 00:47:07] 2025-12-03 05:29:39,770 | INFO     | chi2: 0.08902151652681942
[2025-12-03 00:47:07] 2025-12-03 05:29:39,770 | INFO     | current memory leak: -61.10 B/s (using 57 data points, chi2=0.09)
[2025-12-03 00:47:07] 2025-12-03 05:29:39,770 | INFO     | could have reported an average CPU frequency of 3791 MHz (6 samples)
[2025-12-03 00:47:07] 2025-12-03 05:29:39,770 | INFO     | ..............................
[2025-12-03 00:47:07] 2025-12-03 05:29:39,770 | INFO     | . Timing measurements:
[2025-12-03 00:47:07] 2025-12-03 05:29:39,770 | INFO     | . get job = 0 s
[2025-12-03 00:47:07] 2025-12-03 05:29:39,771 | INFO     | . initial setup = 3 s
[2025-12-03 00:47:07] 2025-12-03 05:29:39,771 | INFO     | . payload setup = 19 s
[2025-12-03 00:47:07] 2025-12-03 05:29:39,771 | INFO     | . stage-in = 0 s
[2025-12-03 00:47:07] 2025-12-03 05:29:39,771 | INFO     | . payload execution = 3873 s
[2025-12-03 00:47:07] 2025-12-03 05:29:39,771 | INFO     | . stage-out = 1 s
[2025-12-03 00:47:07] 2025-12-03 05:29:39,771 | INFO     | . log creation = 0 s
[2025-12-03 00:47:07] 2025-12-03 05:29:39,771 | INFO     | ..............................
[2025-12-03 00:47:07] 2025-12-03 05:29:39,998 | INFO     | 
[2025-12-03 00:47:07] 2025-12-03 05:29:39,998 | INFO     | job summary report
[2025-12-03 00:47:07] 2025-12-03 05:29:39,998 | INFO     | --------------------------------------------------
[2025-12-03 00:47:07] 2025-12-03 05:29:39,998 | INFO     | PanDA job id: 6912027440
[2025-12-03 00:47:07] 2025-12-03 05:29:39,998 | INFO     | task id: 46964970
[2025-12-03 00:47:07] 2025-12-03 05:29:39,998 | INFO     | errors: (none)
[2025-12-03 00:47:07] 2025-12-03 05:29:39,998 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 00:47:07] 2025-12-03 05:29:39,998 | INFO     | pilot state: finished 
[2025-12-03 00:47:07] 2025-12-03 05:29:39,998 | INFO     | transexitcode: 0
[2025-12-03 00:47:07] 2025-12-03 05:29:39,998 | INFO     | exeerrorcode: 0
[2025-12-03 00:47:07] 2025-12-03 05:29:39,998 | INFO     | exeerrordiag: 
[2025-12-03 00:47:07] 2025-12-03 05:29:39,998 | INFO     | exitcode: 0
[2025-12-03 00:47:07] 2025-12-03 05:29:39,998 | INFO     | exitmsg: OK
[2025-12-03 00:47:07] 2025-12-03 05:29:39,998 | INFO     | cpuconsumptiontime: 20590 s
[2025-12-03 00:47:07] 2025-12-03 05:29:39,999 | INFO     | nevents: 400
[2025-12-03 00:47:07] 2025-12-03 05:29:39,999 | INFO     | neventsw: 0
[2025-12-03 00:47:07] 2025-12-03 05:29:39,999 | INFO     | pid: 3951741
[2025-12-03 00:47:07] 2025-12-03 05:29:39,999 | INFO     | pgrp: 3951741
[2025-12-03 00:47:07] 2025-12-03 05:29:39,999 | INFO     | corecount: 8
[2025-12-03 00:47:07] 2025-12-03 05:29:39,999 | INFO     | event service: False
[2025-12-03 00:47:07] 2025-12-03 05:29:39,999 | INFO     | sizes: {0: 2283925, 11: 2283925, 14: 2284215, 21: 2284243, 3894: 2310001, 3896: 2318999, 3898: 2319183, 3931: 2319377}
[2025-12-03 00:47:07] 2025-12-03 05:29:39,999 | INFO     | --------------------------------------------------
[2025-12-03 00:47:07] 2025-12-03 05:29:39,999 | INFO     | 
[2025-12-03 00:47:07] 2025-12-03 05:29:39,999 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-03 00:47:07] 2025-12-03 05:29:40,197 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 00:47:07] 2025-12-03 05:29:40,197 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 00:47:07] 2025-12-03 05:29:40,197 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 00:47:07] 2025-12-03 05:29:40,197 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 00:47:07] 2025-12-03 05:29:40,197 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 00:47:07] 2025-12-03 05:29:40,197 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 00:47:07] 2025-12-03 05:29:40,197 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 00:47:07] 2025-12-03 05:29:40,197 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 00:47:07] 2025-12-03 05:29:40,198 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 00:47:07] 2025-12-03 05:29:40,198 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 00:47:07] 2025-12-03 05:29:40,198 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 00:47:07] 2025-12-03 05:29:40,198 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 00:47:07] 2025-12-03 05:29:40,198 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 00:47:07] 2025-12-03 05:29:40,198 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 00:47:07] 2025-12-03 05:29:40,198 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 00:47:07] 2025-12-03 05:29:40,198 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 00:47:07] 2025-12-03 05:29:40,198 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 00:47:07] 2025-12-03 05:29:40,198 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 00:47:07] 2025-12-03 05:29:40,198 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 00:47:07] 2025-12-03 05:29:40,198 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 00:47:07] 2025-12-03 05:29:40,198 | INFO     | job 6912027440 has completed (purged errors)
[2025-12-03 00:47:07] 2025-12-03 05:29:40,198 | INFO     | overall cleanup function is called
[2025-12-03 00:47:07] 2025-12-03 05:29:41,206 | INFO     | --- collectZombieJob: --- 10, [3951741]
[2025-12-03 00:47:07] 2025-12-03 05:29:41,206 | INFO     | zombie collector waiting for pid 3951741
[2025-12-03 00:47:07] 2025-12-03 05:29:41,206 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 00:47:07] 2025-12-03 05:29:41,206 | INFO     | collected zombie processes
[2025-12-03 00:47:07] 2025-12-03 05:29:41,206 | INFO     | will attempt to kill all subprocesses of pid=3951741
[2025-12-03 00:47:07] 2025-12-03 05:29:42,634 | INFO     | process IDs to be killed: [3951741] (in reverse order)
[2025-12-03 00:47:07] 2025-12-03 05:29:42,927 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 00:47:07] 2025-12-03 05:29:42,928 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 00:47:07] 2025-12-03 05:29:42,958 | INFO     | did not find any defunct processes belonging to 3951741
[2025-12-03 00:47:07] 2025-12-03 05:29:43,037 | INFO     | did not find any defunct processes belonging to 3951741
[2025-12-03 00:47:07] 2025-12-03 05:29:43,052 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 00:47:07] 2025-12-03 05:29:43,053 | INFO     | ready for new job
[2025-12-03 00:47:07] 2025-12-03 05:29:43,053 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 00:47:07] 2025-12-03 05:29:43,066 | INFO     | ***************************************
[2025-12-03 00:47:07] 2025-12-03 05:29:43,066 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 00:47:07] 2025-12-03 05:29:43,066 | INFO     | ***************************************
[2025-12-03 00:47:07] 2025-12-03 05:29:43,066 | INFO     | 
[2025-12-03 00:47:07] 2025-12-03 05:29:43,096 | INFO     | architecture information:
[2025-12-03 00:47:07] 2025-12-03 05:29:43,096 | INFO     | executing command: cat /etc/os-release
[2025-12-03 00:47:07] 2025-12-03 05:29:43,172 | INFO     | cat /etc/os-release:
[2025-12-03 00:47:07] NAME="CentOS Linux"
[2025-12-03 00:47:07] VERSION="7 (Core)"
[2025-12-03 00:47:07] ID="centos"
[2025-12-03 00:47:07] ID_LIKE="rhel fedora"
[2025-12-03 00:47:07] VERSION_ID="7"
[2025-12-03 00:47:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 00:47:07] ANSI_COLOR="0;31"
[2025-12-03 00:47:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 00:47:07] HOME_URL="https://www.centos.org/"
[2025-12-03 00:47:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 00:47:07] 
[2025-12-03 00:47:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 00:47:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 00:47:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 00:47:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 00:47:07] 
[2025-12-03 00:47:07] 2025-12-03 05:29:43,172 | INFO     | ***************************************
[2025-12-03 00:47:07] 2025-12-03 05:29:43,680 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-03 00:47:07] 2025-12-03 05:29:43,826 | INFO     | sufficient remaining disk space (87986012160 B)
[2025-12-03 00:47:07] 2025-12-03 05:29:43,826 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 00:47:07] 2025-12-03 05:29:43,826 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 00:47:07] 2025-12-03 05:29:43,826 | INFO     | update_server=False
[2025-12-03 00:47:07] 2025-12-03 05:29:43,827 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 00:47:07] 2025-12-03 05:29:43,827 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 00:47:07] 2025-12-03 05:29:44,163 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-03 00:47:07] 2025-12-03 05:29:44,167 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-03 00:47:07] 2025-12-03 05:29:44,171 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 00:47:07] 2025-12-03 05:29:44,171 | INFO     | will abort loop
[2025-12-03 00:47:07] 2025-12-03 05:29:44,238 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 00:47:07] 2025-12-03 05:29:44,597 | INFO     | all data control threads have been joined
[2025-12-03 00:47:07] 2025-12-03 05:29:44,699 | INFO     | all payload control threads have been joined
[2025-12-03 00:47:07] 2025-12-03 05:29:44,832 | INFO     | [job] retrieve thread has finished
[2025-12-03 00:47:07] 2025-12-03 05:29:44,858 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 00:47:07] 2025-12-03 05:29:44,970 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 00:47:07] 2025-12-03 05:29:44,971 | INFO     | [payload] failed_post thread has finished
[2025-12-03 00:47:07] 2025-12-03 05:29:45,078 | INFO     | [job] validate thread has finished
[2025-12-03 00:47:07] 2025-12-03 05:29:45,078 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 00:47:07] 2025-12-03 05:29:45,096 | INFO     | all job control threads have been joined
[2025-12-03 00:47:07] 2025-12-03 05:29:45,177 | INFO     | [job] job monitor thread has finished
[2025-12-03 00:47:07] 2025-12-03 05:29:45,603 | INFO     | [data] control thread has finished
[2025-12-03 00:47:07] 2025-12-03 05:29:45,705 | INFO     | [payload] control thread has finished
[2025-12-03 00:47:07] 2025-12-03 05:29:45,784 | INFO     | [payload] validate_post thread has finished
[2025-12-03 00:47:07] 2025-12-03 05:29:45,839 | INFO     | [data] copytool_out thread has finished
[2025-12-03 00:47:07] 2025-12-03 05:29:45,864 | INFO     | [job] queue monitor thread has finished
[2025-12-03 00:47:07] 2025-12-03 05:29:46,023 | INFO     | [data] copytool_in thread has finished
[2025-12-03 00:47:07] 2025-12-03 05:29:46,029 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 00:47:07] 2025-12-03 05:29:46,104 | INFO     | [job] control thread has finished
[2025-12-03 00:47:07] 2025-12-03 05:29:48,251 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 00:47:07] 2025-12-03 05:29:54,044 | INFO     | job.realtimelogging is not enabled
[2025-12-03 00:47:07] 2025-12-03 05:29:55,050 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 00:47:07] 2025-12-03 05:30:13,639 | INFO     | PID=3936504 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-03 00:47:07] 2025-12-03 05:30:13,639 | INFO     | .. there are 59 such processes running
[2025-12-03 00:47:07] 2025-12-03 05:30:13,640 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 00:47:07] 2025-12-03 05:30:13,640 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 00:47:07] 2025-12-03 05:30:13,640 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 00:47:07] 2025-12-03 05:30:39,784 | INFO     | [monitor] cgroup control has ended
[2025-12-03 00:47:07] 2025-12-03 05:30:39,959 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140479349839680)>', '<ExcThread(monitor, started 140478699788032)>']
[2025-12-03 00:47:07] 2025-12-03 05:30:40,835 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 00:47:07] 2025-12-03 05:30:40,835 | INFO     | [monitor] control thread has ended
[2025-12-03 00:47:07] 2025-12-03 05:30:44,984 | INFO     | all workflow threads have been joined
[2025-12-03 00:47:07] 2025-12-03 05:30:44,984 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 00:47:07] 2025-12-03 05:30:44,985 | INFO     | traces error code: 0
[2025-12-03 00:47:07] 2025-12-03 05:30:44,985 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 00:47:07] 2025-12-03 05:30:45,243 [wrapper] ==== pilot stdout END ====
[2025-12-03 00:47:07] 2025-12-03 05:30:45,265 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 00:47:07] 2025-12-03 05:30:45,293 [wrapper] pilotpid: 3936504
[2025-12-03 00:47:07] 2025-12-03 05:30:45,320 [wrapper] Pilot exit status: 0
[2025-12-03 00:47:07] 2025-12-03 05:30:45,391 [wrapper] pandaids: 6912027440
[2025-12-03 00:47:07] 2025-12-03 05:30:45,808 [wrapper] cleanup supervisor_pilot  806832 3936505
[2025-12-03 00:47:07] 2025-12-03 05:30:45,846 [wrapper] Test setup, not cleaning
[2025-12-03 00:47:07] 2025-12-03 05:30:45,877 [wrapper] apfmon messages muted
[2025-12-03 00:47:07] 2025-12-03 05:30:45,962 [wrapper] ==== wrapper stdout END ====
[2025-12-03 00:47:07] 2025-12-03 05:30:46,015 [wrapper] ==== wrapper stderr END ====
[2025-12-03 00:47:07]  *** Error codes and diagnostics ***
[2025-12-03 00:47:07]     "exeErrorCode": 0,
[2025-12-03 00:47:07]     "exeErrorDiag": "",
[2025-12-03 00:47:07]     "pilotErrorCode": 0,
[2025-12-03 00:47:07]     "pilotErrorDiag": "",
[2025-12-03 00:47:07]  *** Listing of results directory ***
[2025-12-03 00:47:07] total 452492
[2025-12-03 00:47:07] -rw-r--r--. 1 boincer umatlas    576529 Dec  2 06:03 pilot3.tar.gz
[2025-12-03 00:47:07] -rwx------. 1 boincer umatlas     36292 Dec  2 06:05 runpilot2-wrapper.sh
[2025-12-03 00:47:07] -rw-r--r--. 1 boincer umatlas      5112 Dec  2 06:05 queuedata.json
[2025-12-03 00:47:07] -rw-r--r--. 1 boincer umatlas       100 Dec  2 23:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 00:47:07] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  2 23:23 run_atlas
[2025-12-03 00:47:07] -rw-r--r--. 1 boincer umatlas       105 Dec  2 23:23 job.xml
[2025-12-03 00:47:07] -rw-r--r--. 2 boincer umatlas 266928391 Dec  2 23:23 EVNT.46964963._000067.pool.root.1
[2025-12-03 00:47:07] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 23:23 start_atlas.sh
[2025-12-03 00:47:07] drwxrwx--x. 2 boincer umatlas      4096 Dec  2 23:23 shared
[2025-12-03 00:47:07] -rw-r--r--. 2 boincer umatlas    589952 Dec  2 23:23 input.tar.gz
[2025-12-03 00:47:07] -rw-r--r--. 1 boincer umatlas         0 Dec  2 23:23 boinc_lockfile
[2025-12-03 00:47:07] -rw-r--r--. 1 boincer umatlas      2595 Dec  2 23:23 pandaJob.out
[2025-12-03 00:47:07] -rw-------. 1 boincer umatlas        57 Dec  2 23:23 setup.sh.local
[2025-12-03 00:47:07] -rw-------. 1 boincer umatlas    989297 Dec  2 23:23 agis_schedconf.cvmfs.json
[2025-12-03 00:47:07] -rw-------. 1 boincer umatlas   1516240 Dec  2 23:23 agis_ddmendpoints.agis.ALL.json
[2025-12-03 00:47:07] drwx------. 5 boincer umatlas      4096 Dec  2 23:23 pilot3
[2025-12-03 00:47:07] -rw-------. 1 boincer umatlas 190831869 Dec  3 00:28 HITS.46964970._001710.pool.root.1
[2025-12-03 00:47:07] -rw-r--r--. 1 boincer umatlas       529 Dec  3 00:28 boinc_task_state.xml
[2025-12-03 00:47:07] -rw-------. 1 boincer umatlas      1032 Dec  3 00:29 memory_monitor_summary.json
[2025-12-03 00:47:07] -rw-------. 1 boincer umatlas    306964 Dec  3 00:29 log.46964970._001710.job.log.tgz.1
[2025-12-03 00:47:07] -rw-------. 1 boincer umatlas      7764 Dec  3 00:29 heartbeat.json
[2025-12-03 00:47:07] -rw-------. 1 boincer umatlas        95 Dec  3 00:30 pilot_heartbeat.json
[2025-12-03 00:47:07] -rw-------. 1 boincer umatlas      5082 Dec  3 00:30 pilotlog.txt
[2025-12-03 00:47:07] -rw-------. 1 boincer umatlas    530353 Dec  3 00:30 log.46964970._001710.job.log.1
[2025-12-03 00:47:07] -rw-------. 1 boincer umatlas       357 Dec  3 00:30 output.list
[2025-12-03 00:47:07] -rw-r--r--. 1 boincer umatlas       620 Dec  3 00:30 runtime_log
[2025-12-03 00:47:07] -rw-------. 1 boincer umatlas    860160 Dec  3 00:30 result.tar.gz
[2025-12-03 00:47:07] -rw-------. 1 boincer umatlas       651 Dec  3 00:30 vElNDmFNdk8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmAiPKDm7hBTLm.diag
[2025-12-03 00:47:07] -rw-r--r--. 1 boincer umatlas      9332 Dec  3 00:30 runtime_log.err
[2025-12-03 00:47:07] -rw-r--r--. 1 boincer umatlas        27 Dec  3 00:47 wrapper_checkpoint.txt
[2025-12-03 00:47:07] -rw-r--r--. 1 boincer umatlas      7170 Dec  3 00:47 init_data.xml
[2025-12-03 00:47:07] -rw-r--r--. 1 boincer umatlas      8192 Dec  3 00:47 boinc_mmap_file
[2025-12-03 00:47:07] -rw-r--r--. 1 boincer umatlas     22423 Dec  3 00:47 stderr.txt
[2025-12-03 00:47:07] HITS file was successfully produced:
[2025-12-03 00:47:07] -rw-------. 1 boincer umatlas 190831869 Dec  3 00:28 shared/HITS.pool.root.1
[2025-12-03 00:47:07]  *** Contents of shared directory: ***
[2025-12-03 00:47:07] total 448480
[2025-12-03 00:47:07] -rw-r--r--. 2 boincer umatlas 266928391 Dec  2 23:23 ATLAS.root_0
[2025-12-03 00:47:07] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 23:23 start_atlas.sh
[2025-12-03 00:47:07] -rw-r--r--. 2 boincer umatlas    589952 Dec  2 23:23 input.tar.gz
[2025-12-03 00:47:07] -rw-------. 1 boincer umatlas 190831869 Dec  3 00:28 HITS.pool.root.1
[2025-12-03 00:47:07] -rw-------. 1 boincer umatlas    860160 Dec  3 00:30 result.tar.gz
00:47:09 (3927743): run_atlas exited; CPU time 20733.949390
00:47:09 (3927743): called boinc_finish(0)

</stderr_txt>
]]>

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