Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:25:19 (2205352): wrapper (7.7.26015): starting
14:25:19 (2205352): wrapper: running run_atlas (--nthreads 12)
[2025-12-03 14:25:19] Arguments: --nthreads 12
[2025-12-03 14:25:19] Threads: 12
[2025-12-03 14:25:19] Checking for CVMFS
[2025-12-03 14:25:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-03 14:25:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-03 14:25:20] Running cvmfs_config stat atlas.cern.ch
[2025-12-03 14:25:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-03 14:25:20] 2.13.3.0 9777 17194 111768 153595 3 81 3782540 4097025 1044 130560 0 13143245 99.933 1399515 1765 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-12-03 14:25:20] CVMFS is ok
[2025-12-03 14:25:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-03 14:25:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-03 14:25:20] Further information can be found at the LHC@home message board.
[2025-12-03 14:25:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-03 14:25:20] Checking for apptainer binary...
[2025-12-03 14:25:20] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-12-03 14:25:20] apptainer is not installed, using version from CVMFS
[2025-12-03 14:25:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-03 14:25:20] pckelar6.cern.ch
[2025-12-03 14:25:20] apptainer works
[2025-12-03 14:25:20] Set ATHENA_PROC_NUMBER=12
[2025-12-03 14:25:20] Set ATHENA_CORE_NUMBER=12
[2025-12-03 14:25:20] Starting ATLAS job with PandaID=6912027378
[2025-12-03 14:25:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 16:28:48]  *** The last 200 lines of the pilot log: ***
[2025-12-03 16:28:48] 2025-12-03 15:28:00,620 | INFO     | mean x: 1764771990.5
[2025-12-03 16:28:48] 2025-12-03 15:28:00,620 | INFO     | mean y: 2937291.875
[2025-12-03 16:28:48] 2025-12-03 15:28:00,621 | INFO     | intersect: 49325681751.791374
[2025-12-03 16:28:48] 2025-12-03 15:28:00,621 | INFO     | chi2: 1.63688361220024
[2025-12-03 16:28:48] 2025-12-03 15:28:00,621 | INFO     | sum of square deviations: 471562330.0
[2025-12-03 16:28:48] 2025-12-03 15:28:00,622 | INFO     | sum of deviations: -11870833020.0
[2025-12-03 16:28:48] 2025-12-03 15:28:00,623 | INFO     | mean x: 1764771838.0
[2025-12-03 16:28:48] 2025-12-03 15:28:00,623 | INFO     | mean y: 2944665.652173913
[2025-12-03 16:28:48] 2025-12-03 15:28:00,623 | INFO     | intersect: 44428273990.19023
[2025-12-03 16:28:48] 2025-12-03 15:28:00,623 | INFO     | chi2: 1.6388115540763846
[2025-12-03 16:28:48] 2025-12-03 15:28:00,624 | INFO     | current chi2=1.6388115540763846 (change=-0.11778124368617604 %)
[2025-12-03 16:28:48] 2025-12-03 15:28:00,624 | INFO     | right removable region: 114
[2025-12-03 16:28:48] 2025-12-03 15:28:00,624 | INFO     | sum of square deviations: 471562330.0
[2025-12-03 16:28:48] 2025-12-03 15:28:00,625 | INFO     | sum of deviations: -35167669552.99999
[2025-12-03 16:28:48] 2025-12-03 15:28:00,626 | INFO     | mean x: 1764772143.0
[2025-12-03 16:28:48] 2025-12-03 15:28:00,626 | INFO     | mean y: 2984395.1304347827
[2025-12-03 16:28:48] 2025-12-03 15:28:00,626 | INFO     | intersect: 131614268021.9707
[2025-12-03 16:28:48] 2025-12-03 15:28:00,626 | INFO     | chi2: 0.19932721592875605
[2025-12-03 16:28:48] 2025-12-03 15:28:00,627 | INFO     | current chi2=0.19932721592875605 (change=87.82276183577721 %)
[2025-12-03 16:28:48] 2025-12-03 15:28:00,627 | INFO     | sum of square deviations: 412686807.5
[2025-12-03 16:28:48] 2025-12-03 15:28:00,628 | INFO     | sum of deviations: -35127845428.5
[2025-12-03 16:28:48] 2025-12-03 15:28:00,628 | INFO     | mean x: 1764772295.5
[2025-12-03 16:28:48] 2025-12-03 15:28:00,628 | INFO     | mean y: 2984125.3545454545
[2025-12-03 16:28:48] 2025-12-03 15:28:00,629 | INFO     | intersect: 150220164045.31876
[2025-12-03 16:28:48] 2025-12-03 15:28:00,629 | INFO     | chi2: 0.14415652520509692
[2025-12-03 16:28:48] 2025-12-03 15:28:00,629 | INFO     | current chi2=0.14415652520509692 (change=27.67845347490247 %)
[2025-12-03 16:28:48] 2025-12-03 15:28:00,630 | INFO     | sum of square deviations: 358927660.0
[2025-12-03 16:28:48] 2025-12-03 15:28:00,631 | INFO     | sum of deviations: -32601241075.0
[2025-12-03 16:28:48] 2025-12-03 15:28:00,631 | INFO     | mean x: 1764772448.0
[2025-12-03 16:28:48] 2025-12-03 15:28:00,631 | INFO     | size of work directory /var/lib/boinc/slots/1/PanDA_Pilot-6912027378: 4826921 B (within 2537553920 B limit)
[2025-12-03 16:28:48] 2025-12-03 15:28:00,631 | INFO     | mean y: 2976941.7047619047
[2025-12-03 16:28:48] 2025-12-03 15:28:00,632 | INFO     | pfn file=/var/lib/boinc/slots/1/PanDA_Pilot-6912027378/HITS.46964970._001648.pool.root.1 does not exist (skip from workdir size calculation)
[2025-12-03 16:28:48] 2025-12-03 15:28:00,632 | INFO     | intersect: 160296480150.02786
[2025-12-03 16:28:48] 2025-12-03 15:28:00,632 | INFO     | total size of present files: 0 B (workdir size: 4826921 B)
[2025-12-03 16:28:48] 2025-12-03 15:28:00,633 | INFO     | chi2: 0.13468185234291982
[2025-12-03 16:28:48] 2025-12-03 15:28:00,633 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/1/PanDA_Pilot-6912027378/HITS.46964970._001648.pool.root.1 since it does not exist
[2025-12-03 16:28:48] 2025-12-03 15:28:00,633 | INFO     | current chi2=0.13468185234291982 (change=6.572489763260542 %)
[2025-12-03 16:28:48] 2025-12-03 15:28:00,634 | INFO     | left removable region: 30
[2025-12-03 16:28:48] 2025-12-03 15:28:00,634 | INFO     | sum of square deviations: 183761585.0
[2025-12-03 16:28:48] 2025-12-03 15:28:00,635 | INFO     | sum of deviations: -21324747891.0
[2025-12-03 16:28:48] 2025-12-03 15:28:00,635 | INFO     | mean x: 1764772722.5
[2025-12-03 16:28:48] 2025-12-03 15:28:00,635 | INFO     | mean y: 2960974.1428571427
[2025-12-03 16:28:48] 2025-12-03 15:28:00,635 | INFO     | intersect: 204797305734.64435
[2025-12-03 16:28:48] 2025-12-03 15:28:00,636 | INFO     | chi2: 0.10824351074134721
[2025-12-03 16:28:48] 2025-12-03 15:28:00,636 | INFO     | current memory leak: -116.05 B/s (using 84 data points, chi2=0.11)
[2025-12-03 16:28:48] 2025-12-03 15:28:00,637 | INFO     | could have reported an average CPU frequency of 2808 MHz (7 samples)
[2025-12-03 16:28:48] 2025-12-03 15:28:00,637 | INFO     | ..............................
[2025-12-03 16:28:48] 2025-12-03 15:28:00,637 | INFO     | . Timing measurements:
[2025-12-03 16:28:48] 2025-12-03 15:28:00,637 | INFO     | . get job = 0 s
[2025-12-03 16:28:48] 2025-12-03 15:28:00,637 | INFO     | . initial setup = 1 s
[2025-12-03 16:28:48] 2025-12-03 15:28:00,638 | INFO     | . payload setup = 8 s
[2025-12-03 16:28:48] 2025-12-03 15:28:00,638 | INFO     | . stage-in = 0 s
[2025-12-03 16:28:48] 2025-12-03 15:28:00,638 | INFO     | . payload execution = 7312 s
[2025-12-03 16:28:48] 2025-12-03 15:28:00,638 | INFO     | . stage-out = 1 s
[2025-12-03 16:28:48] 2025-12-03 15:28:00,639 | INFO     | . log creation = 0 s
[2025-12-03 16:28:48] 2025-12-03 15:28:00,639 | INFO     | ..............................
[2025-12-03 16:28:48] 2025-12-03 15:28:00,990 | INFO     | number of running child processes to parent process 2216748: 1
[2025-12-03 16:28:48] 2025-12-03 15:28:00,990 | INFO     | maximum number of monitored processes: 6
[2025-12-03 16:28:48] 2025-12-03 15:28:00,991 | INFO     | aborting job monitoring since job object (job id=6912027378) has expired
[2025-12-03 16:28:48] 2025-12-03 15:28:01,076 | INFO     | time since job start (7351s) is within the limit (172800.0s)
[2025-12-03 16:28:48] 2025-12-03 15:28:01,174 | INFO     | 
[2025-12-03 16:28:48] 2025-12-03 15:28:01,175 | INFO     | job summary report
[2025-12-03 16:28:48] 2025-12-03 15:28:01,175 | INFO     | --------------------------------------------------
[2025-12-03 16:28:48] 2025-12-03 15:28:01,175 | INFO     | PanDA job id: 6912027378
[2025-12-03 16:28:48] 2025-12-03 15:28:01,175 | INFO     | task id: 46964970
[2025-12-03 16:28:48] 2025-12-03 15:28:01,176 | INFO     | errors: (none)
[2025-12-03 16:28:48] 2025-12-03 15:28:01,176 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 16:28:48] 2025-12-03 15:28:01,176 | INFO     | pilot state: finished 
[2025-12-03 16:28:48] 2025-12-03 15:28:01,176 | INFO     | transexitcode: 0
[2025-12-03 16:28:48] 2025-12-03 15:28:01,176 | INFO     | exeerrorcode: 0
[2025-12-03 16:28:48] 2025-12-03 15:28:01,176 | INFO     | exeerrordiag: 
[2025-12-03 16:28:48] 2025-12-03 15:28:01,177 | INFO     | exitcode: 0
[2025-12-03 16:28:48] 2025-12-03 15:28:01,177 | INFO     | exitmsg: OK
[2025-12-03 16:28:48] 2025-12-03 15:28:01,177 | INFO     | cpuconsumptiontime: 81522 s
[2025-12-03 16:28:48] 2025-12-03 15:28:01,177 | INFO     | nevents: 400
[2025-12-03 16:28:48] 2025-12-03 15:28:01,177 | INFO     | neventsw: 0
[2025-12-03 16:28:48] 2025-12-03 15:28:01,177 | INFO     | pid: 2216748
[2025-12-03 16:28:48] 2025-12-03 15:28:01,178 | INFO     | pgrp: 2216748
[2025-12-03 16:28:48] 2025-12-03 15:28:01,178 | INFO     | corecount: 12
[2025-12-03 16:28:48] 2025-12-03 15:28:01,178 | INFO     | event service: False
[2025-12-03 16:28:48] 2025-12-03 15:28:01,178 | INFO     | sizes: {0: 2283097, 1: 2283953, 2: 2283953, 6: 2284243, 12: 2284271, 7325: 2311587, 7326: 2320585, 7327: 2320641, 7334: 2320863}
[2025-12-03 16:28:48] 2025-12-03 15:28:01,178 | INFO     | --------------------------------------------------
[2025-12-03 16:28:48] 2025-12-03 15:28:01,178 | INFO     | 
[2025-12-03 16:28:48] 2025-12-03 15:28:01,179 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-12-03 16:28:48] 2025-12-03 15:28:01,200 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 16:28:48] 2025-12-03 15:28:01,200 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 16:28:48] 2025-12-03 15:28:01,200 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 16:28:48] 2025-12-03 15:28:01,200 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 16:28:48] 2025-12-03 15:28:01,201 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 16:28:48] 2025-12-03 15:28:01,201 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 16:28:48] 2025-12-03 15:28:01,201 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 16:28:48] 2025-12-03 15:28:01,201 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 16:28:48] 2025-12-03 15:28:01,201 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 16:28:48] 2025-12-03 15:28:01,202 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 16:28:48] 2025-12-03 15:28:01,202 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 16:28:48] 2025-12-03 15:28:01,202 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 16:28:48] 2025-12-03 15:28:01,202 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 16:28:48] 2025-12-03 15:28:01,202 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 16:28:48] 2025-12-03 15:28:01,202 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 16:28:48] 2025-12-03 15:28:01,203 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 16:28:48] 2025-12-03 15:28:01,203 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 16:28:48] 2025-12-03 15:28:01,203 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 16:28:48] 2025-12-03 15:28:01,203 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 16:28:48] 2025-12-03 15:28:01,203 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 16:28:48] 2025-12-03 15:28:01,203 | INFO     | job 6912027378 has completed (purged errors)
[2025-12-03 16:28:48] 2025-12-03 15:28:01,204 | INFO     | overall cleanup function is called
[2025-12-03 16:28:48] 2025-12-03 15:28:02,212 | INFO     | --- collectZombieJob: --- 10, [2216748]
[2025-12-03 16:28:48] 2025-12-03 15:28:02,212 | INFO     | zombie collector waiting for pid 2216748
[2025-12-03 16:28:48] 2025-12-03 15:28:02,212 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 16:28:48] 2025-12-03 15:28:02,213 | INFO     | collected zombie processes
[2025-12-03 16:28:48] 2025-12-03 15:28:02,213 | INFO     | will attempt to kill all subprocesses of pid=2216748
[2025-12-03 16:28:48] 2025-12-03 15:28:02,467 | INFO     | PID=2209208 has CPU usage=13.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-12-03 16:28:48] 2025-12-03 15:28:02,468 | INFO     | .. there are 2 such processes running
[2025-12-03 16:28:48] 2025-12-03 15:28:02,553 | INFO     | process IDs to be killed: [2216748] (in reverse order)
[2025-12-03 16:28:48] 2025-12-03 15:28:02,616 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 16:28:48] 2025-12-03 15:28:02,616 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 16:28:48] 2025-12-03 15:28:02,622 | INFO     | did not find any defunct processes belonging to 2216748
[2025-12-03 16:28:48] 2025-12-03 15:28:02,629 | INFO     | did not find any defunct processes belonging to 2216748
[2025-12-03 16:28:48] 2025-12-03 15:28:02,630 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 16:28:48] 2025-12-03 15:28:02,630 | INFO     | ready for new job
[2025-12-03 16:28:48] 2025-12-03 15:28:02,631 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 16:28:48] 2025-12-03 15:28:02,632 | INFO     | ***************************************
[2025-12-03 16:28:48] 2025-12-03 15:28:02,633 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 16:28:48] 2025-12-03 15:28:02,633 | INFO     | ***************************************
[2025-12-03 16:28:48] 2025-12-03 15:28:02,633 | INFO     | 
[2025-12-03 16:28:48] 2025-12-03 15:28:02,634 | INFO     | architecture information:
[2025-12-03 16:28:48] 2025-12-03 15:28:02,635 | INFO     | executing command: cat /etc/os-release
[2025-12-03 16:28:48] 2025-12-03 15:28:02,650 | INFO     | cat /etc/os-release:
[2025-12-03 16:28:48] NAME="CentOS Linux"
[2025-12-03 16:28:48] VERSION="7 (Core)"
[2025-12-03 16:28:48] ID="centos"
[2025-12-03 16:28:48] ID_LIKE="rhel fedora"
[2025-12-03 16:28:48] VERSION_ID="7"
[2025-12-03 16:28:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 16:28:48] ANSI_COLOR="0;31"
[2025-12-03 16:28:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 16:28:48] HOME_URL="https://www.centos.org/"
[2025-12-03 16:28:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 16:28:48] 
[2025-12-03 16:28:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 16:28:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 16:28:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 16:28:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 16:28:48] 
[2025-12-03 16:28:48] 2025-12-03 15:28:02,651 | INFO     | ***************************************
[2025-12-03 16:28:48] 2025-12-03 15:28:03,154 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-12-03 16:28:48] 2025-12-03 15:28:03,171 | INFO     | sufficient remaining disk space (867462807552 B)
[2025-12-03 16:28:48] 2025-12-03 15:28:03,172 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 16:28:48] 2025-12-03 15:28:03,172 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 16:28:48] 2025-12-03 15:28:03,172 | INFO     | update_server=False
[2025-12-03 16:28:48] 2025-12-03 15:28:03,172 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 16:28:48] 2025-12-03 15:28:03,173 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-03 16:28:48] 2025-12-03 15:28:03,173 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 16:28:48] 2025-12-03 15:28:03,173 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 16:28:48] 2025-12-03 15:28:03,173 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 16:28:48] 2025-12-03 15:28:03,274 | INFO     | all data control threads have been joined
[2025-12-03 16:28:48] 2025-12-03 15:28:03,494 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-03 16:28:48] 2025-12-03 15:28:03,494 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-03 16:28:48] 2025-12-03 15:28:03,494 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 16:28:48] 2025-12-03 15:28:03,495 | INFO     | will abort loop
[2025-12-03 16:28:48] 2025-12-03 15:28:04,048 | INFO     | all payload control threads have been joined
[2025-12-03 16:28:48] 2025-12-03 15:28:04,178 | INFO     | [job] retrieve thread has finished
[2025-12-03 16:28:48] 2025-12-03 15:28:04,201 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 16:28:48] 2025-12-03 15:28:04,280 | INFO     | [data] control thread has finished
[2025-12-03 16:28:48] 2025-12-03 15:28:04,350 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 16:28:48] 2025-12-03 15:28:04,405 | INFO     | [data] copytool_in thread has finished
[2025-12-03 16:28:48] 2025-12-03 15:28:04,500 | INFO     | [job] job monitor thread has finished
[2025-12-03 16:28:48] 2025-12-03 15:28:04,674 | INFO     | all job control threads have been joined
[2025-12-03 16:28:48] 2025-12-03 15:28:04,708 | INFO     | [payload] validate_post thread has finished
[2025-12-03 16:28:48] 2025-12-03 15:28:05,053 | INFO     | [payload] control thread has finished
[2025-12-03 16:28:48] 2025-12-03 15:28:05,074 | INFO     | [job] validate thread has finished
[2025-12-03 16:28:48] 2025-12-03 15:28:05,329 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 16:28:48] 2025-12-03 15:28:05,612 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 16:28:48] 2025-12-03 15:28:05,614 | INFO     | [payload] failed_post thread has finished
[2025-12-03 16:28:48] 2025-12-03 15:28:05,672 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 16:28:48] 2025-12-03 15:28:05,680 | INFO     | [job] control thread has finished
[2025-12-03 16:28:48] 2025-12-03 15:28:05,810 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 16:28:48] 2025-12-03 15:28:06,207 | INFO     | [data] copytool_out thread has finished
[2025-12-03 16:28:48] 2025-12-03 15:28:06,815 | INFO     | [job] queue monitor thread has finished
[2025-12-03 16:28:48] 2025-12-03 15:28:08,353 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 16:28:48] 2025-12-03 15:28:14,181 | INFO     | job.realtimelogging is not enabled
[2025-12-03 16:28:48] 2025-12-03 15:28:15,186 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 16:28:48] 2025-12-03 15:28:42,331 | INFO     | [monitor] cgroup control has ended
[2025-12-03 16:28:48] 2025-12-03 15:28:42,849 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140193316329280)>', '<ExcThread(monitor, started 140192916674304)>']
[2025-12-03 16:28:48] 2025-12-03 15:28:43,365 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 16:28:48] 2025-12-03 15:28:43,365 | INFO     | [monitor] control thread has ended
[2025-12-03 16:28:48] 2025-12-03 15:28:47,874 | INFO     | all workflow threads have been joined
[2025-12-03 16:28:48] 2025-12-03 15:28:47,874 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 16:28:48] 2025-12-03 15:28:47,875 | INFO     | traces error code: 0
[2025-12-03 16:28:48] 2025-12-03 15:28:47,875 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 16:28:48] 2025-12-03 15:28:47,996 [wrapper] ==== pilot stdout END ====
[2025-12-03 16:28:48] 2025-12-03 15:28:48,000 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 16:28:48] 2025-12-03 15:28:48,002 [wrapper] pilotpid: 2209208
[2025-12-03 16:28:48] 2025-12-03 15:28:48,004 [wrapper] Pilot exit status: 0
[2025-12-03 16:28:48] 2025-12-03 15:28:48,014 [wrapper] pandaids: 6912027378
[2025-12-03 16:28:48] 2025-12-03 15:28:48,060 [wrapper] cleanup supervisor_pilot 2260289 2209209
[2025-12-03 16:28:48] 2025-12-03 15:28:48,063 [wrapper] Test setup, not cleaning
[2025-12-03 16:28:48] 2025-12-03 15:28:48,065 [wrapper] apfmon messages muted
[2025-12-03 16:28:48] 2025-12-03 15:28:48,068 [wrapper] ==== wrapper stdout END ====
[2025-12-03 16:28:48] 2025-12-03 15:28:48,071 [wrapper] ==== wrapper stderr END ====
[2025-12-03 16:28:48]  *** Error codes and diagnostics ***
[2025-12-03 16:28:48]     "exeErrorCode": 0,
[2025-12-03 16:28:48]     "exeErrorDiag": "",
[2025-12-03 16:28:48]     "pilotErrorCode": 0,
[2025-12-03 16:28:48]     "pilotErrorDiag": "",
[2025-12-03 16:28:48]  *** Listing of results directory ***
[2025-12-03 16:28:48] total 455328
[2025-12-03 16:28:48] -rw-r--r--. 1 boinc boinc    576529 Dec  2 12:03 pilot3.tar.gz
[2025-12-03 16:28:48] -rwx------. 1 boinc boinc     36292 Dec  2 12:04 runpilot2-wrapper.sh
[2025-12-03 16:28:48] -rw-r--r--. 1 boinc boinc      5112 Dec  2 12:04 queuedata.json
[2025-12-03 16:28:48] -rw-r--r--. 1 boinc boinc       100 Dec  3 14:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 16:28:48] -rwxr-xr-x. 1 boinc boinc      7986 Dec  3 14:25 run_atlas
[2025-12-03 16:28:48] -rw-r--r--. 1 boinc boinc       105 Dec  3 14:25 job.xml
[2025-12-03 16:28:48] -rw-r--r--. 2 boinc boinc 275514760 Dec  3 14:25 EVNT.46964963._000064.pool.root.1
[2025-12-03 16:28:48] -rw-r--r--. 1 boinc boinc      6293 Dec  3 14:25 init_data.xml
[2025-12-03 16:28:48] -rw-r--r--. 2 boinc boinc     15847 Dec  3 14:25 start_atlas.sh
[2025-12-03 16:28:48] drwxrwx--x. 2 boinc boinc        68 Dec  3 14:25 shared
[2025-12-03 16:28:48] -rw-r--r--. 2 boinc boinc    589946 Dec  3 14:25 input.tar.gz
[2025-12-03 16:28:48] -rw-r--r--. 1 boinc boinc         0 Dec  3 14:25 boinc_lockfile
[2025-12-03 16:28:48] -rw-r--r--. 1 boinc boinc      2595 Dec  3 14:25 pandaJob.out
[2025-12-03 16:28:48] -rw-------. 1 boinc boinc    985783 Dec  3 14:25 agis_schedconf.cvmfs.json
[2025-12-03 16:28:48] -rw-------. 1 boinc boinc   1516240 Dec  3 14:25 agis_ddmendpoints.agis.ALL.json
[2025-12-03 16:28:48] drwx------. 5 boinc boinc      4096 Dec  3 14:25 pilot3
[2025-12-03 16:28:48] -rw-------. 1 boinc boinc        95 Dec  3 16:27 pilot_heartbeat.json
[2025-12-03 16:28:48] -rw-------. 1 boinc boinc 183892168 Dec  3 16:27 HITS.46964970._001648.pool.root.1
[2025-12-03 16:28:48] -rw-r--r--. 1 boinc boinc       530 Dec  3 16:27 boinc_task_state.xml
[2025-12-03 16:28:48] -rw-------. 1 boinc boinc      1015 Dec  3 16:27 memory_monitor_summary.json
[2025-12-03 16:28:48] -rw-------. 1 boinc boinc    434386 Dec  3 16:27 log.46964970._001648.job.log.tgz.1
[2025-12-03 16:28:48] -rw-------. 1 boinc boinc      7788 Dec  3 16:28 heartbeat.json
[2025-12-03 16:28:48] -rw-r--r--. 1 boinc boinc        27 Dec  3 16:28 wrapper_checkpoint.txt
[2025-12-03 16:28:48] -rw-r--r--. 1 boinc boinc      8192 Dec  3 16:28 boinc_mmap_file
[2025-12-03 16:28:48] -rw-------. 1 boinc boinc      4811 Dec  3 16:28 pilotlog.txt
[2025-12-03 16:28:48] -rw-------. 1 boinc boinc   1043443 Dec  3 16:28 log.46964970._001648.job.log.1
[2025-12-03 16:28:48] -rw-------. 1 boinc boinc       357 Dec  3 16:28 output.list
[2025-12-03 16:28:48] -rw-r--r--. 1 boinc boinc       620 Dec  3 16:28 runtime_log
[2025-12-03 16:28:48] -rw-------. 1 boinc boinc   1495040 Dec  3 16:28 result.tar.gz
[2025-12-03 16:28:48] -rw-r--r--. 1 boinc boinc      8841 Dec  3 16:28 runtime_log.err
[2025-12-03 16:28:48] -rw-------. 1 boinc boinc       659 Dec  3 16:28 6jXLDmEMdk8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm9gPKDmHr6Tnn.diag
[2025-12-03 16:28:48] -rw-r--r--. 1 boinc boinc     21638 Dec  3 16:28 stderr.txt
[2025-12-03 16:28:48] HITS file was successfully produced:
[2025-12-03 16:28:48] -rw-------. 1 boinc boinc 183892168 Dec  3 16:27 shared/HITS.pool.root.1
[2025-12-03 16:28:48]  *** Contents of shared directory: ***
[2025-12-03 16:28:48] total 450704
[2025-12-03 16:28:48] -rw-r--r--. 2 boinc boinc 275514760 Dec  3 14:25 ATLAS.root_0
[2025-12-03 16:28:48] -rw-r--r--. 2 boinc boinc     15847 Dec  3 14:25 start_atlas.sh
[2025-12-03 16:28:48] -rw-r--r--. 2 boinc boinc    589946 Dec  3 14:25 input.tar.gz
[2025-12-03 16:28:48] -rw-------. 1 boinc boinc 183892168 Dec  3 16:27 HITS.pool.root.1
[2025-12-03 16:28:48] -rw-------. 1 boinc boinc   1495040 Dec  3 16:28 result.tar.gz
16:28:49 (2205352): run_atlas exited; CPU time 81650.896892
16:28:49 (2205352): called boinc_finish(0)

</stderr_txt>
]]>

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