Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:41:01 (138363): wrapper (7.7.26015): starting
22:41:02 (138363): wrapper: running run_atlas (--nthreads 10)
[2025-12-02 22:41:02] Arguments: --nthreads 10
[2025-12-02 22:41:02] Threads: 10
[2025-12-02 22:41:02] Checking for CVMFS
[2025-12-02 22:41:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 22:41:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 22:41:02] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 22:41:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 22:41:04] 2.13.3.0 7314 39542 261560 153579 2 778 34444200 40960001 44214 16776704 0 596040548 99.748 381525128 48472 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-02 22:41:04] CVMFS is ok
[2025-12-02 22:41:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 22:41:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 22:41:04] Further information can be found at the LHC@home message board.
[2025-12-02 22:41:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 22:41:04] Checking for apptainer binary...
[2025-12-02 22:41:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 22:41:04] Running /usr/bin/apptainer --version
[2025-12-02 22:41:04] apptainer version 1.4.4-1.el9
[2025-12-02 22:41:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 22:41:05] c8-16-1.aglt2.org
[2025-12-02 22:41:05] apptainer works
[2025-12-02 22:41:05] Set ATHENA_PROC_NUMBER=10
[2025-12-02 22:41:05] Set ATHENA_CORE_NUMBER=10
[2025-12-02 22:41:05] Starting ATLAS job with PandaID=6895361250
[2025-12-02 22:41:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 08:52:32]  *** The last 200 lines of the pilot log: ***
[2025-12-03 08:52:32] 2025-12-03 13:51:36,937 | INFO     | intersect: -37567964996.81919
[2025-12-03 08:52:32] 2025-12-03 13:51:36,937 | INFO     | chi2: 20.847089807195523
[2025-12-03 08:52:32] 2025-12-03 13:51:36,938 | INFO     | sum of square deviations: 64332511185.72344
[2025-12-03 08:52:32] 2025-12-03 13:51:36,942 | INFO     | sum of deviations: 1632598431364.3472
[2025-12-03 08:52:32] 2025-12-03 13:51:36,942 | INFO     | mean x: 1764751542.3682432
[2025-12-03 08:52:32] 2025-12-03 13:51:36,942 | INFO     | mean y: 3068102.7736486485
[2025-12-03 08:52:32] 2025-12-03 13:51:36,942 | INFO     | intersect: -44781917695.473595
[2025-12-03 08:52:32] 2025-12-03 13:51:36,943 | INFO     | chi2: 17.397981283532786
[2025-12-03 08:52:32] 2025-12-03 13:51:36,943 | INFO     | current chi2=17.397981283532786 (change=16.544796206865538 %)
[2025-12-03 08:52:32] 2025-12-03 13:51:36,943 | INFO     | right removable region: 591
[2025-12-03 08:52:32] 2025-12-03 13:51:36,943 | INFO     | sum of square deviations: 64331836525.72334
[2025-12-03 08:52:32] 2025-12-03 13:51:36,948 | INFO     | sum of deviations: 1133133661821.6284
[2025-12-03 08:52:32] 2025-12-03 13:51:36,948 | INFO     | mean x: 1764751847.3682432
[2025-12-03 08:52:32] 2025-12-03 13:51:36,948 | INFO     | mean y: 3072129.9695945946
[2025-12-03 08:52:32] 2025-12-03 13:51:36,948 | INFO     | intersect: -31081066470.912304
[2025-12-03 08:52:32] 2025-12-03 13:51:36,948 | INFO     | chi2: 15.546064479025967
[2025-12-03 08:52:32] 2025-12-03 13:51:36,948 | INFO     | current chi2=15.546064479025967 (change=25.42813110700885 %)
[2025-12-03 08:52:32] 2025-12-03 13:51:36,948 | INFO     | sum of square deviations: 62715133988.12264
[2025-12-03 08:52:32] 2025-12-03 13:51:36,953 | INFO     | sum of deviations: 887037783426.7485
[2025-12-03 08:52:32] 2025-12-03 13:51:36,953 | INFO     | mean x: 1764751999.8841567
[2025-12-03 08:52:32] 2025-12-03 13:51:36,953 | INFO     | mean y: 3095343.3492333903
[2025-12-03 08:52:32] 2025-12-03 13:51:36,953 | INFO     | intersect: -24957414229.53359
[2025-12-03 08:52:32] 2025-12-03 13:51:36,953 | INFO     | chi2: 11.424911020070969
[2025-12-03 08:52:32] 2025-12-03 13:51:36,953 | INFO     | current chi2=11.424911020070969 (change=26.50930378241431 %)
[2025-12-03 08:52:32] 2025-12-03 13:51:36,954 | INFO     | sum of square deviations: 61125734287.72004
[2025-12-03 08:52:32] 2025-12-03 13:51:36,958 | INFO     | sum of deviations: 655546635993.306
[2025-12-03 08:52:32] 2025-12-03 13:51:36,958 | INFO     | mean x: 1764752152.4003437
[2025-12-03 08:52:32] 2025-12-03 13:51:36,958 | INFO     | mean y: 3117562.470790378
[2025-12-03 08:52:32] 2025-12-03 13:51:36,958 | INFO     | intersect: -18923073678.399166
[2025-12-03 08:52:32] 2025-12-03 13:51:36,958 | INFO     | chi2: 7.911927097938421
[2025-12-03 08:52:32] 2025-12-03 13:51:36,958 | INFO     | current chi2=7.911927097938421 (change=30.74845761127622 %)
[2025-12-03 08:52:32] 2025-12-03 13:51:36,959 | INFO     | sum of square deviations: 59563404862.0069
[2025-12-03 08:52:32] 2025-12-03 13:51:36,963 | INFO     | sum of deviations: 441538103213.2106
[2025-12-03 08:52:32] 2025-12-03 13:51:36,963 | INFO     | mean x: 1764752304.916811
[2025-12-03 08:52:32] 2025-12-03 13:51:36,963 | INFO     | mean y: 3138440.4627383016
[2025-12-03 08:52:32] 2025-12-03 13:51:36,963 | INFO     | intersect: -13078809899.450481
[2025-12-03 08:52:32] 2025-12-03 13:51:36,963 | INFO     | chi2: 4.995602756036786
[2025-12-03 08:52:32] 2025-12-03 13:51:36,963 | INFO     | current chi2=4.995602756036786 (change=36.85984850216239 %)
[2025-12-03 08:52:32] 2025-12-03 13:51:36,964 | INFO     | sum of square deviations: 58028159421.459854
[2025-12-03 08:52:32] 2025-12-03 13:51:36,968 | INFO     | sum of deviations: 393207308312.18555
[2025-12-03 08:52:32] 2025-12-03 13:51:36,968 | INFO     | mean x: 1764752457.4213288
[2025-12-03 08:52:32] 2025-12-03 13:51:36,968 | INFO     | mean y: 3143236.493006993
[2025-12-03 08:52:32] 2025-12-03 13:51:36,968 | INFO     | intersect: -11955077919.205648
[2025-12-03 08:52:32] 2025-12-03 13:51:36,968 | INFO     | chi2: 4.910260957644384
[2025-12-03 08:52:32] 2025-12-03 13:51:36,968 | INFO     | current chi2=4.910260957644384 (change=1.7083383639596426 %)
[2025-12-03 08:52:32] 2025-12-03 13:51:36,968 | INFO     | left removable region: 50
[2025-12-03 08:52:32] 2025-12-03 13:51:36,969 | INFO     | sum of square deviations: 49095643343.33081
[2025-12-03 08:52:32] 2025-12-03 13:51:36,972 | INFO     | sum of deviations: 505595806357.3695
[2025-12-03 08:52:32] 2025-12-03 13:51:36,972 | INFO     | mean x: 1764753036.9297597
[2025-12-03 08:52:32] 2025-12-03 13:51:36,972 | INFO     | mean y: 3183430.5360443625
[2025-12-03 08:52:32] 2025-12-03 13:51:36,972 | INFO     | intersect: -18170562221.160824
[2025-12-03 08:52:32] 2025-12-03 13:51:36,973 | INFO     | chi2: 0.9030719636531909
[2025-12-03 08:52:32] 2025-12-03 13:51:36,973 | INFO     | current memory leak: 10.30 B/s (using 541 data points, chi2=0.90)
[2025-12-03 08:52:32] 2025-12-03 13:51:36,973 | INFO     | could have reported an average CPU frequency of 3788 MHz (23 samples)
[2025-12-03 08:52:32] 2025-12-03 13:51:36,973 | INFO     | ..............................
[2025-12-03 08:52:32] 2025-12-03 13:51:36,973 | INFO     | . Timing measurements:
[2025-12-03 08:52:32] 2025-12-03 13:51:36,974 | INFO     | . get job = 0 s
[2025-12-03 08:52:32] 2025-12-03 13:51:36,974 | INFO     | . initial setup = 7 s
[2025-12-03 08:52:32] 2025-12-03 13:51:36,974 | INFO     | . payload setup = 58 s
[2025-12-03 08:52:32] 2025-12-03 13:51:36,974 | INFO     | . stage-in = 0 s
[2025-12-03 08:52:32] 2025-12-03 13:51:36,974 | INFO     | . payload execution = 36396 s
[2025-12-03 08:52:32] 2025-12-03 13:51:36,974 | INFO     | . stage-out = 4 s
[2025-12-03 08:52:32] 2025-12-03 13:51:36,974 | INFO     | . log creation = 0 s
[2025-12-03 08:52:32] 2025-12-03 13:51:36,974 | INFO     | ..............................
[2025-12-03 08:52:32] 2025-12-03 13:51:37,024 | INFO     | 
[2025-12-03 08:52:32] 2025-12-03 13:51:37,024 | INFO     | job summary report
[2025-12-03 08:52:32] 2025-12-03 13:51:37,024 | INFO     | --------------------------------------------------
[2025-12-03 08:52:32] 2025-12-03 13:51:37,024 | INFO     | PanDA job id: 6895361250
[2025-12-03 08:52:32] 2025-12-03 13:51:37,024 | INFO     | task id: 47556137
[2025-12-03 08:52:32] 2025-12-03 13:51:37,024 | INFO     | errors: (none)
[2025-12-03 08:52:32] 2025-12-03 13:51:37,024 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 08:52:32] 2025-12-03 13:51:37,024 | INFO     | pilot state: finished 
[2025-12-03 08:52:32] 2025-12-03 13:51:37,024 | INFO     | transexitcode: 0
[2025-12-03 08:52:32] 2025-12-03 13:51:37,024 | INFO     | exeerrorcode: 0
[2025-12-03 08:52:32] 2025-12-03 13:51:37,024 | INFO     | exeerrordiag: 
[2025-12-03 08:52:32] 2025-12-03 13:51:37,024 | INFO     | exitcode: 0
[2025-12-03 08:52:32] 2025-12-03 13:51:37,024 | INFO     | exitmsg: OK
[2025-12-03 08:52:32] 2025-12-03 13:51:37,024 | INFO     | cpuconsumptiontime: 140640 s
[2025-12-03 08:52:32] 2025-12-03 13:51:37,024 | INFO     | nevents: 1000
[2025-12-03 08:52:32] 2025-12-03 13:51:37,024 | INFO     | neventsw: 0
[2025-12-03 08:52:32] 2025-12-03 13:51:37,024 | INFO     | pid: 166947
[2025-12-03 08:52:32] 2025-12-03 13:51:37,024 | INFO     | pgrp: 166947
[2025-12-03 08:52:32] 2025-12-03 13:51:37,024 | INFO     | corecount: 10
[2025-12-03 08:52:32] 2025-12-03 13:51:37,026 | INFO     | event service: False
[2025-12-03 08:52:32] 2025-12-03 13:51:37,026 | INFO     | sizes: {0: 2284143, 1: 2284342, 2: 2284370, 13: 2284370, 24: 2284426, 34: 2284454, 36: 2284872, 45: 2284900, 36456: 2326424, 36457: 2326423, 36462: 2335501, 36463:
[2025-12-03 08:52:32] 2025-12-03 13:51:37,026 | INFO     | --------------------------------------------------
[2025-12-03 08:52:32] 2025-12-03 13:51:37,026 | INFO     | 
[2025-12-03 08:52:32] 2025-12-03 13:51:37,026 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-03 08:52:32] 2025-12-03 13:51:37,046 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 08:52:32] 2025-12-03 13:51:37,046 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 08:52:32] 2025-12-03 13:51:37,046 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 08:52:32] 2025-12-03 13:51:37,046 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 08:52:32] 2025-12-03 13:51:37,046 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 08:52:32] 2025-12-03 13:51:37,046 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 08:52:32] 2025-12-03 13:51:37,046 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 08:52:32] 2025-12-03 13:51:37,046 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 08:52:32] 2025-12-03 13:51:37,046 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 08:52:32] 2025-12-03 13:51:37,046 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 08:52:32] 2025-12-03 13:51:37,046 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 08:52:32] 2025-12-03 13:51:37,047 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 08:52:32] 2025-12-03 13:51:37,047 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 08:52:32] 2025-12-03 13:51:37,047 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 08:52:32] 2025-12-03 13:51:37,047 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 08:52:32] 2025-12-03 13:51:37,047 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 08:52:32] 2025-12-03 13:51:37,047 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 08:52:32] 2025-12-03 13:51:37,047 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 08:52:32] 2025-12-03 13:51:37,047 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 08:52:32] 2025-12-03 13:51:37,047 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 08:52:32] 2025-12-03 13:51:37,047 | INFO     | job 6895361250 has completed (purged errors)
[2025-12-03 08:52:32] 2025-12-03 13:51:37,047 | INFO     | overall cleanup function is called
[2025-12-03 08:52:32] 2025-12-03 13:51:38,065 | INFO     | --- collectZombieJob: --- 10, [166947]
[2025-12-03 08:52:32] 2025-12-03 13:51:38,069 | INFO     | zombie collector waiting for pid 166947
[2025-12-03 08:52:32] 2025-12-03 13:51:38,069 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 08:52:32] 2025-12-03 13:51:38,069 | INFO     | collected zombie processes
[2025-12-03 08:52:32] 2025-12-03 13:51:38,069 | INFO     | will attempt to kill all subprocesses of pid=166947
[2025-12-03 08:52:32] 2025-12-03 13:51:38,785 | INFO     | process IDs to be killed: [166947] (in reverse order)
[2025-12-03 08:52:32] 2025-12-03 13:51:38,996 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 08:52:32] 2025-12-03 13:51:38,996 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 08:52:32] 2025-12-03 13:51:39,026 | INFO     | did not find any defunct processes belonging to 166947
[2025-12-03 08:52:32] 2025-12-03 13:51:39,061 | INFO     | did not find any defunct processes belonging to 166947
[2025-12-03 08:52:32] 2025-12-03 13:51:39,062 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 08:52:32] 2025-12-03 13:51:39,063 | INFO     | ready for new job
[2025-12-03 08:52:32] 2025-12-03 13:51:39,063 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 08:52:32] 2025-12-03 13:51:39,065 | INFO     | ***************************************
[2025-12-03 08:52:32] 2025-12-03 13:51:39,065 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 08:52:32] 2025-12-03 13:51:39,065 | INFO     | ***************************************
[2025-12-03 08:52:32] 2025-12-03 13:51:39,065 | INFO     | 
[2025-12-03 08:52:32] 2025-12-03 13:51:39,070 | INFO     | architecture information:
[2025-12-03 08:52:32] 2025-12-03 13:51:39,071 | INFO     | executing command: cat /etc/os-release
[2025-12-03 08:52:32] 2025-12-03 13:51:39,088 | INFO     | cat /etc/os-release:
[2025-12-03 08:52:32] NAME="CentOS Linux"
[2025-12-03 08:52:32] VERSION="7 (Core)"
[2025-12-03 08:52:32] ID="centos"
[2025-12-03 08:52:32] ID_LIKE="rhel fedora"
[2025-12-03 08:52:32] VERSION_ID="7"
[2025-12-03 08:52:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 08:52:32] ANSI_COLOR="0;31"
[2025-12-03 08:52:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 08:52:32] HOME_URL="https://www.centos.org/"
[2025-12-03 08:52:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 08:52:32] 
[2025-12-03 08:52:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 08:52:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 08:52:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 08:52:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 08:52:32] 
[2025-12-03 08:52:32] 2025-12-03 13:51:39,088 | INFO     | ***************************************
[2025-12-03 08:52:32] 2025-12-03 13:51:39,591 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-03 08:52:32] 2025-12-03 13:51:39,623 | INFO     | sufficient remaining disk space (169710977024 B)
[2025-12-03 08:52:32] 2025-12-03 13:51:39,625 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 08:52:32] 2025-12-03 13:51:39,625 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 08:52:32] 2025-12-03 13:51:39,625 | INFO     | update_server=False
[2025-12-03 08:52:32] 2025-12-03 13:51:39,625 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 08:52:32] 2025-12-03 13:51:39,625 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 08:52:32] 2025-12-03 13:51:39,626 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 08:52:32] 2025-12-03 13:51:39,626 | INFO     | aborting loop
[2025-12-03 08:52:32] 2025-12-03 13:51:39,807 | INFO     | all payload control threads have been joined
[2025-12-03 08:52:32] 2025-12-03 13:51:40,150 | INFO     | all data control threads have been joined
[2025-12-03 08:52:32] 2025-12-03 13:51:40,632 | INFO     | [job] job monitor thread has finished
[2025-12-03 08:52:32] 2025-12-03 13:51:40,647 | INFO     | [job] retrieve thread has finished
[2025-12-03 08:52:32] 2025-12-03 13:51:40,813 | INFO     | [payload] control thread has finished
[2025-12-03 08:52:32] 2025-12-03 13:51:40,871 | INFO     | [payload] validate_post thread has finished
[2025-12-03 08:52:32] 2025-12-03 13:51:41,077 | INFO     | all job control threads have been joined
[2025-12-03 08:52:32] 2025-12-03 13:51:41,083 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 08:52:32] 2025-12-03 13:51:41,156 | INFO     | [data] control thread has finished
[2025-12-03 08:52:32] 2025-12-03 13:51:41,174 | INFO     | [data] copytool_in thread has finished
[2025-12-03 08:52:32] 2025-12-03 13:51:41,632 | INFO     | [data] copytool_out thread has finished
[2025-12-03 08:52:32] 2025-12-03 13:51:41,704 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 08:52:32] 2025-12-03 13:51:41,808 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 08:52:32] 2025-12-03 13:51:41,818 | INFO     | [payload] failed_post thread has finished
[2025-12-03 08:52:32] 2025-12-03 13:51:41,836 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 08:52:32] 2025-12-03 13:51:41,915 | INFO     | [job] validate thread has finished
[2025-12-03 08:52:32] 2025-12-03 13:51:41,986 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 08:52:32] 2025-12-03 13:51:42,041 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 08:52:32] 2025-12-03 13:51:42,083 | INFO     | [job] control thread has finished
[2025-12-03 08:52:32] 2025-12-03 13:51:43,047 | INFO     | [job] queue monitor thread has finished
[2025-12-03 08:52:32] 2025-12-03 13:51:45,091 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 08:52:32] 2025-12-03 13:52:09,082 | INFO     | PID=148072 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-03 08:52:32] 2025-12-03 13:52:09,083 | INFO     | .. there are 38 such processes running
[2025-12-03 08:52:32] 2025-12-03 13:52:09,083 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 08:52:32] 2025-12-03 13:52:09,083 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 08:52:32] 2025-12-03 13:52:09,083 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 08:52:32] 2025-12-03 13:52:25,987 | INFO     | [monitor] cgroup control has ended
[2025-12-03 08:52:32] 2025-12-03 13:52:26,808 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139935389345600)>', '<ExcThread(monitor, started 139934430115584)>']
[2025-12-03 08:52:32] 2025-12-03 13:52:27,211 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 08:52:32] 2025-12-03 13:52:27,211 | INFO     | [monitor] control thread has ended
[2025-12-03 08:52:32] 2025-12-03 13:52:31,833 | INFO     | all workflow threads have been joined
[2025-12-03 08:52:32] 2025-12-03 13:52:31,833 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 08:52:32] 2025-12-03 13:52:31,833 | INFO     | traces error code: 0
[2025-12-03 08:52:32] 2025-12-03 13:52:31,834 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 08:52:32] 2025-12-03 13:52:31,989 [wrapper] ==== pilot stdout END ====
[2025-12-03 08:52:32] 2025-12-03 13:52:32,008 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 08:52:32] 2025-12-03 13:52:32,030 [wrapper] pilotpid: 148072
[2025-12-03 08:52:32] 2025-12-03 13:52:32,069 [wrapper] Pilot exit status: 0
[2025-12-03 08:52:32] 2025-12-03 13:52:32,216 [wrapper] pandaids: 6895361250
[2025-12-03 08:52:32] 2025-12-03 13:52:32,379 [wrapper] cleanup supervisor_pilot 3799874 148073
[2025-12-03 08:52:32] 2025-12-03 13:52:32,407 [wrapper] Test setup, not cleaning
[2025-12-03 08:52:32] 2025-12-03 13:52:32,426 [wrapper] apfmon messages muted
[2025-12-03 08:52:32] 2025-12-03 13:52:32,449 [wrapper] ==== wrapper stdout END ====
[2025-12-03 08:52:32] 2025-12-03 13:52:32,475 [wrapper] ==== wrapper stderr END ====
[2025-12-03 08:52:32]  *** Error codes and diagnostics ***
[2025-12-03 08:52:32]     "exeErrorCode": 0,
[2025-12-03 08:52:32]     "exeErrorDiag": "",
[2025-12-03 08:52:32]     "pilotErrorCode": 0,
[2025-12-03 08:52:32]     "pilotErrorDiag": "",
[2025-12-03 08:52:32]  *** Listing of results directory ***
[2025-12-03 08:52:32] total 1312312
[2025-12-03 08:52:32] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 08:59 pilot3.tar.gz
[2025-12-03 08:52:32] -rwx------. 1 boincer umatlas     36292 Nov 23 09:13 runpilot2-wrapper.sh
[2025-12-03 08:52:32] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 09:13 queuedata.json
[2025-12-03 08:52:32] -rw-r--r--. 1 boincer umatlas       100 Dec  2 22:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 08:52:32] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  2 22:41 run_atlas
[2025-12-03 08:52:32] -rw-r--r--. 1 boincer umatlas       105 Dec  2 22:41 job.xml
[2025-12-03 08:52:32] -rw-r--r--. 2 boincer umatlas 409822887 Dec  2 22:41 EVNT.47483658._000761.pool.root.1
[2025-12-03 08:52:32] -rw-r--r--. 2 boincer umatlas    590103 Dec  2 22:41 input.tar.gz
[2025-12-03 08:52:32] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 22:41 start_atlas.sh
[2025-12-03 08:52:32] drwxrwx--x. 2 boincer umatlas      4096 Dec  2 22:41 shared
[2025-12-03 08:52:32] -rw-r--r--. 1 boincer umatlas         0 Dec  2 22:41 boinc_lockfile
[2025-12-03 08:52:32] -rw-r--r--. 1 boincer umatlas      2785 Dec  2 22:41 pandaJob.out
[2025-12-03 08:52:32] -rw-------. 1 boincer umatlas        57 Dec  2 22:41 setup.sh.local
[2025-12-03 08:52:32] -rw-------. 1 boincer umatlas    989300 Dec  2 22:42 agis_schedconf.cvmfs.json
[2025-12-03 08:52:32] drwx------. 5 boincer umatlas      4096 Dec  2 22:42 pilot3
[2025-12-03 08:52:32] -rw-r--r--. 1 boincer umatlas       533 Dec  3 08:39 boinc_task_state.xml
[2025-12-03 08:52:32] -rw-r--r--. 1 boincer umatlas      7175 Dec  3 08:47 init_data.xml
[2025-12-03 08:52:32] -rw-------. 1 boincer umatlas 916822983 Dec  3 08:50 HITS.47556137._007566.pool.root.1
[2025-12-03 08:52:32] -rw-------. 1 boincer umatlas      1085 Dec  3 08:51 memory_monitor_summary.json
[2025-12-03 08:52:32] -rw-------. 1 boincer umatlas   1516240 Dec  3 08:51 agis_ddmendpoints.agis.ALL.json
[2025-12-03 08:52:32] -rw-------. 1 boincer umatlas   2040291 Dec  3 08:51 log.47556137._007566.job.log.tgz.1
[2025-12-03 08:52:32] -rw-------. 1 boincer umatlas      8640 Dec  3 08:51 heartbeat.json
[2025-12-03 08:52:32] -rw-------. 1 boincer umatlas        95 Dec  3 08:52 pilot_heartbeat.json
[2025-12-03 08:52:32] -rw-r--r--. 1 boincer umatlas      8192 Dec  3 08:52 boinc_mmap_file
[2025-12-03 08:52:32] -rw-r--r--. 1 boincer umatlas        29 Dec  3 08:52 wrapper_checkpoint.txt
[2025-12-03 08:52:32] -rw-------. 1 boincer umatlas      4824 Dec  3 08:52 pilotlog.txt
[2025-12-03 08:52:32] -rw-------. 1 boincer umatlas   4584398 Dec  3 08:52 log.47556137._007566.job.log.1
[2025-12-03 08:52:32] -rw-------. 1 boincer umatlas       353 Dec  3 08:52 output.list
[2025-12-03 08:52:32] -rw-r--r--. 1 boincer umatlas       620 Dec  3 08:52 runtime_log
[2025-12-03 08:52:32] -rw-------. 1 boincer umatlas   6645760 Dec  3 08:52 result.tar.gz
[2025-12-03 08:52:32] -rw-r--r--. 1 boincer umatlas      9340 Dec  3 08:52 runtime_log.err
[2025-12-03 08:52:32] -rw-------. 1 boincer umatlas       665 Dec  3 08:52 eQoNDml1Ph8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmvxKKDmtjChyn.diag
[2025-12-03 08:52:32] -rw-r--r--. 1 boincer umatlas      8233 Dec  3 08:52 stderr.txt
[2025-12-03 08:52:33] HITS file was successfully produced:
[2025-12-03 08:52:33] -rw-------. 1 boincer umatlas 916822983 Dec  3 08:50 shared/HITS.pool.root.1
[2025-12-03 08:52:33]  *** Contents of shared directory: ***
[2025-12-03 08:52:33] total 1302652
[2025-12-03 08:52:33] -rw-r--r--. 2 boincer umatlas 409822887 Dec  2 22:41 ATLAS.root_0
[2025-12-03 08:52:33] -rw-r--r--. 2 boincer umatlas    590103 Dec  2 22:41 input.tar.gz
[2025-12-03 08:52:33] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 22:41 start_atlas.sh
[2025-12-03 08:52:33] -rw-------. 1 boincer umatlas 916822983 Dec  3 08:50 HITS.pool.root.1
[2025-12-03 08:52:33] -rw-------. 1 boincer umatlas   6645760 Dec  3 08:52 result.tar.gz
08:52:34 (138363): run_atlas exited; CPU time 141029.556505
08:52:34 (138363): called boinc_finish(0)

</stderr_txt>
]]>

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