Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
19:18:08 (2776416): wrapper (7.7.26015): starting
19:18:08 (2776416): wrapper: running run_atlas (--nthreads 4)
[2025-12-02 19:18:08] Arguments: --nthreads 4
[2025-12-02 19:18:08] Threads: 4
[2025-12-02 19:18:08] Checking for CVMFS
[2025-12-02 19:18:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 19:18:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 19:18:08] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 19:18:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 19:18:08] 2.13.3.0 3932 3337 65628 153577 2 109 3649112 20480000 4885 130560 0 8663234 99.843 1279340 892 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-12-02 19:18:08] CVMFS is ok
[2025-12-02 19:18:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 19:18:08] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-02 19:18:08] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-02 19:18:08] Further information can be found at the LHC@home message board.
[2025-12-02 19:18:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 19:18:08] Checking for apptainer binary...
[2025-12-02 19:18:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 19:18:08] Running /usr/bin/apptainer --version
[2025-12-02 19:18:08] apptainer version 1.4.3
[2025-12-02 19:18:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 19:18:08] phantom
[2025-12-02 19:18:08] apptainer works
[2025-12-02 19:18:08] Set ATHENA_PROC_NUMBER=4
[2025-12-02 19:18:08] Set ATHENA_CORE_NUMBER=4
[2025-12-02 19:18:08] Starting ATLAS job with PandaID=6908987557
[2025-12-02 19:18:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 21:28:36]  *** The last 200 lines of the pilot log: ***
[2025-12-02 21:28:36] 2025-12-03 04:27:58,979 | INFO     | time since job start (7781s) is within the limit (172800.0s)
[2025-12-02 21:28:36] 2025-12-03 04:28:00,957 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-02 21:28:36] 2025-12-03 04:28:00,961 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3973.125624999999
[2025-12-02 21:28:36] 2025-12-03 04:28:00,965 | INFO     | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-6908987557/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 21:28:36] 2025-12-03 04:28:00,966 | INFO     | extracted standard info from prmon json
[2025-12-02 21:28:36] 2025-12-03 04:28:00,966 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 21:28:36] 2025-12-03 04:28:00,966 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 21:28:36] 2025-12-03 04:28:00,966 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-02 21:28:36] 2025-12-03 04:28:00,966 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-02 21:28:36] 2025-12-03 04:28:00,968 | INFO     | fitting pss+swap vs Time
[2025-12-02 21:28:36] 2025-12-03 04:28:00,968 | INFO     | sum of square deviations: 650252192.0
[2025-12-02 21:28:36] 2025-12-03 04:28:00,969 | INFO     | sum of deviations: -35902644614.5
[2025-12-02 21:28:36] 2025-12-03 04:28:00,969 | INFO     | mean x: 1764732191.5
[2025-12-02 21:28:36] 2025-12-03 04:28:00,969 | INFO     | mean y: 2478800.0234375
[2025-12-02 21:28:36] 2025-12-03 04:28:00,969 | INFO     | intersect: 97439370963.84448
[2025-12-02 21:28:36] 2025-12-03 04:28:00,969 | INFO     | chi2: 2.274800293633187
[2025-12-02 21:28:36] 2025-12-03 04:28:00,969 | INFO     | sum of square deviations: 576985702.0
[2025-12-02 21:28:36] 2025-12-03 04:28:00,970 | INFO     | sum of deviations: -26020014759.0
[2025-12-02 21:28:36] 2025-12-03 04:28:00,970 | INFO     | mean x: 1764732039.0
[2025-12-02 21:28:36] 2025-12-03 04:28:00,970 | INFO     | mean y: 2498887.9349593497
[2025-12-02 21:28:36] 2025-12-03 04:28:00,970 | INFO     | intersect: 79585673204.54942
[2025-12-02 21:28:36] 2025-12-03 04:28:00,970 | INFO     | chi2: 1.6277117431197707
[2025-12-02 21:28:36] 2025-12-03 04:28:00,970 | INFO     | current chi2=1.6277117431197707 (change=28.445949841158217 %)
[2025-12-02 21:28:36] 2025-12-03 04:28:00,970 | INFO     | sum of square deviations: 509440249.5
[2025-12-02 21:28:36] 2025-12-03 04:28:00,971 | INFO     | sum of deviations: -23648556036.5
[2025-12-02 21:28:36] 2025-12-03 04:28:00,971 | INFO     | mean x: 1764731886.5
[2025-12-02 21:28:36] 2025-12-03 04:28:00,971 | INFO     | mean y: 2504244.9237288134
[2025-12-02 21:28:36] 2025-12-03 04:28:00,971 | INFO     | intersect: 81922535000.74568
[2025-12-02 21:28:36] 2025-12-03 04:28:00,971 | INFO     | chi2: 1.6228735583607548
[2025-12-02 21:28:36] 2025-12-03 04:28:00,971 | INFO     | current chi2=1.6228735583607548 (change=0.2972384256282889 %)
[2025-12-02 21:28:36] 2025-12-03 04:28:00,971 | INFO     | right removable region: 117
[2025-12-02 21:28:36] 2025-12-03 04:28:00,971 | INFO     | sum of square deviations: 576985702.0
[2025-12-02 21:28:36] 2025-12-03 04:28:00,972 | INFO     | sum of deviations: -50093110696.0
[2025-12-02 21:28:36] 2025-12-03 04:28:00,972 | INFO     | mean x: 1764732344.0
[2025-12-02 21:28:36] 2025-12-03 04:28:00,972 | INFO     | mean y: 2507492.8780487804
[2025-12-02 21:28:36] 2025-12-03 04:28:00,972 | INFO     | intersect: 153214159619.4043
[2025-12-02 21:28:36] 2025-12-03 04:28:00,972 | INFO     | chi2: 0.9043210909178117
[2025-12-02 21:28:36] 2025-12-03 04:28:00,972 | INFO     | current chi2=0.9043210909178117 (change=60.246132662771934 %)
[2025-12-02 21:28:36] 2025-12-03 04:28:00,972 | INFO     | sum of square deviations: 509440249.5
[2025-12-02 21:28:36] 2025-12-03 04:28:00,973 | INFO     | sum of deviations: -45522419461.50001
[2025-12-02 21:28:36] 2025-12-03 04:28:00,973 | INFO     | mean x: 1764732496.5
[2025-12-02 21:28:36] 2025-12-03 04:28:00,973 | INFO     | mean y: 2497163.533898305
[2025-12-02 21:28:36] 2025-12-03 04:28:00,973 | INFO     | intersect: 157694970465.08267
[2025-12-02 21:28:36] 2025-12-03 04:28:00,973 | INFO     | chi2: 0.9045837457961157
[2025-12-02 21:28:36] 2025-12-03 04:28:00,973 | INFO     | current chi2=0.9045837457961157 (change=-0.029044426912286293 %)
[2025-12-02 21:28:36] 2025-12-03 04:28:00,973 | INFO     | left removable region: 20
[2025-12-02 21:28:36] 2025-12-03 04:28:00,973 | INFO     | sum of square deviations: 282974608.0
[2025-12-02 21:28:36] 2025-12-03 04:28:00,974 | INFO     | sum of deviations: -24922749625.999996
[2025-12-02 21:28:36] 2025-12-03 04:28:00,974 | INFO     | mean x: 1764732466.0
[2025-12-02 21:28:36] 2025-12-03 04:28:00,974 | INFO     | mean y: 2502528.0103092785
[2025-12-02 21:28:36] 2025-12-03 04:28:00,974 | INFO     | intersect: 155429824144.76666
[2025-12-02 21:28:36] 2025-12-03 04:28:00,974 | INFO     | chi2: 0.20488388206075792
[2025-12-02 21:28:36] 2025-12-03 04:28:00,974 | INFO     | current memory leak: -88.07 B/s (using 97 data points, chi2=0.20)
[2025-12-02 21:28:36] 2025-12-03 04:28:00,974 | INFO     | could have reported an average CPU frequency of 3999 MHz (8 samples)
[2025-12-02 21:28:36] 2025-12-03 04:28:00,975 | INFO     | ..............................
[2025-12-02 21:28:36] 2025-12-03 04:28:00,975 | INFO     | . Timing measurements:
[2025-12-02 21:28:36] 2025-12-03 04:28:00,975 | INFO     | . get job = 0 s
[2025-12-02 21:28:36] 2025-12-03 04:28:00,975 | INFO     | . initial setup = 3 s
[2025-12-02 21:28:36] 2025-12-03 04:28:00,975 | INFO     | . payload setup = 3 s
[2025-12-02 21:28:36] 2025-12-03 04:28:00,975 | INFO     | . stage-in = 0 s
[2025-12-02 21:28:36] 2025-12-03 04:28:00,975 | INFO     | . payload execution = 7754 s
[2025-12-02 21:28:36] 2025-12-03 04:28:00,975 | INFO     | . stage-out = 0 s
[2025-12-02 21:28:36] 2025-12-03 04:28:00,975 | INFO     | . log creation = 0 s
[2025-12-02 21:28:36] 2025-12-03 04:28:00,975 | INFO     | ..............................
[2025-12-02 21:28:36] 2025-12-03 04:28:00,983 | INFO     | time since job start (7783s) is within the limit (172800.0s)
[2025-12-02 21:28:36] 2025-12-03 04:28:01,195 | INFO     | 
[2025-12-02 21:28:36] 2025-12-03 04:28:01,195 | INFO     | job summary report
[2025-12-02 21:28:36] 2025-12-03 04:28:01,195 | INFO     | --------------------------------------------------
[2025-12-02 21:28:36] 2025-12-03 04:28:01,195 | INFO     | PanDA job id: 6908987557
[2025-12-02 21:28:36] 2025-12-03 04:28:01,195 | INFO     | task id: 46965017
[2025-12-02 21:28:36] 2025-12-03 04:28:01,195 | INFO     | errors: (none)
[2025-12-02 21:28:36] 2025-12-03 04:28:01,195 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 21:28:36] 2025-12-03 04:28:01,195 | INFO     | pilot state: finished 
[2025-12-02 21:28:36] 2025-12-03 04:28:01,196 | INFO     | transexitcode: 0
[2025-12-02 21:28:36] 2025-12-03 04:28:01,196 | INFO     | exeerrorcode: 0
[2025-12-02 21:28:36] 2025-12-03 04:28:01,196 | INFO     | exeerrordiag: 
[2025-12-02 21:28:36] 2025-12-03 04:28:01,196 | INFO     | exitcode: 0
[2025-12-02 21:28:36] 2025-12-03 04:28:01,196 | INFO     | exitmsg: OK
[2025-12-02 21:28:36] 2025-12-03 04:28:01,196 | INFO     | cpuconsumptiontime: 30259 s
[2025-12-02 21:28:36] 2025-12-03 04:28:01,196 | INFO     | nevents: 400
[2025-12-02 21:28:36] 2025-12-03 04:28:01,196 | INFO     | neventsw: 0
[2025-12-02 21:28:36] 2025-12-03 04:28:01,196 | INFO     | pid: 2786957
[2025-12-02 21:28:36] 2025-12-03 04:28:01,196 | INFO     | pgrp: 2786957
[2025-12-02 21:28:36] 2025-12-03 04:28:01,196 | INFO     | corecount: 4
[2025-12-02 21:28:36] 2025-12-03 04:28:01,196 | INFO     | event service: False
[2025-12-02 21:28:36] 2025-12-03 04:28:01,196 | INFO     | sizes: {0: 2283987, 3: 2284249, 11: 2284277, 7761: 2312040, 7762: 2321052, 7765: 2321108, 7770: 2321458}
[2025-12-02 21:28:36] 2025-12-03 04:28:01,196 | INFO     | --------------------------------------------------
[2025-12-02 21:28:36] 2025-12-03 04:28:01,196 | INFO     | 
[2025-12-02 21:28:36] 2025-12-03 04:28:01,196 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/6
[2025-12-02 21:28:36] 2025-12-03 04:28:01,210 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 21:28:36] 2025-12-03 04:28:01,210 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 21:28:36] 2025-12-03 04:28:01,210 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 21:28:36] 2025-12-03 04:28:01,210 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 21:28:36] 2025-12-03 04:28:01,210 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 21:28:36] 2025-12-03 04:28:01,210 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 21:28:36] 2025-12-03 04:28:01,211 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 21:28:36] 2025-12-03 04:28:01,211 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 21:28:36] 2025-12-03 04:28:01,211 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 21:28:36] 2025-12-03 04:28:01,211 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 21:28:36] 2025-12-03 04:28:01,211 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 21:28:36] 2025-12-03 04:28:01,211 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 21:28:36] 2025-12-03 04:28:01,211 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 21:28:36] 2025-12-03 04:28:01,211 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 21:28:36] 2025-12-03 04:28:01,211 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 21:28:36] 2025-12-03 04:28:01,211 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 21:28:36] 2025-12-03 04:28:01,211 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 21:28:36] 2025-12-03 04:28:01,211 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 21:28:36] 2025-12-03 04:28:01,211 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 21:28:36] 2025-12-03 04:28:01,211 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 21:28:36] 2025-12-03 04:28:01,211 | INFO     | job 6908987557 has completed (purged errors)
[2025-12-02 21:28:36] 2025-12-03 04:28:01,211 | INFO     | overall cleanup function is called
[2025-12-02 21:28:36] 2025-12-03 04:28:02,219 | INFO     | --- collectZombieJob: --- 10, [2786957]
[2025-12-02 21:28:36] 2025-12-03 04:28:02,219 | INFO     | zombie collector waiting for pid 2786957
[2025-12-02 21:28:36] 2025-12-03 04:28:02,219 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 21:28:36] 2025-12-03 04:28:02,219 | INFO     | collected zombie processes
[2025-12-02 21:28:36] 2025-12-03 04:28:02,219 | INFO     | will attempt to kill all subprocesses of pid=2786957
[2025-12-02 21:28:36] 2025-12-03 04:28:02,356 | INFO     | process IDs to be killed: [2786957] (in reverse order)
[2025-12-02 21:28:36] 2025-12-03 04:28:02,409 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 21:28:36] 2025-12-03 04:28:02,409 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 21:28:36] 2025-12-03 04:28:02,413 | INFO     | did not find any defunct processes belonging to 2786957
[2025-12-02 21:28:36] 2025-12-03 04:28:02,417 | INFO     | did not find any defunct processes belonging to 2786957
[2025-12-02 21:28:36] 2025-12-03 04:28:02,417 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 21:28:36] 2025-12-03 04:28:02,417 | INFO     | ready for new job
[2025-12-02 21:28:36] 2025-12-03 04:28:02,418 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 21:28:36] 2025-12-03 04:28:02,419 | INFO     | ***************************************
[2025-12-02 21:28:36] 2025-12-03 04:28:02,419 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 21:28:36] 2025-12-03 04:28:02,419 | INFO     | ***************************************
[2025-12-02 21:28:36] 2025-12-03 04:28:02,419 | INFO     | 
[2025-12-02 21:28:36] 2025-12-03 04:28:02,420 | INFO     | architecture information:
[2025-12-02 21:28:36] 2025-12-03 04:28:02,420 | INFO     | executing command: cat /etc/os-release
[2025-12-02 21:28:36] 2025-12-03 04:28:02,430 | INFO     | cat /etc/os-release:
[2025-12-02 21:28:36] NAME="CentOS Linux"
[2025-12-02 21:28:36] VERSION="7 (Core)"
[2025-12-02 21:28:36] ID="centos"
[2025-12-02 21:28:36] ID_LIKE="rhel fedora"
[2025-12-02 21:28:36] VERSION_ID="7"
[2025-12-02 21:28:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 21:28:36] ANSI_COLOR="0;31"
[2025-12-02 21:28:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 21:28:36] HOME_URL="https://www.centos.org/"
[2025-12-02 21:28:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 21:28:36] 
[2025-12-02 21:28:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 21:28:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 21:28:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 21:28:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 21:28:36] 
[2025-12-02 21:28:36] 2025-12-03 04:28:02,430 | INFO     | ***************************************
[2025-12-02 21:28:36] 2025-12-03 04:28:02,933 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2025-12-02 21:28:36] 2025-12-03 04:28:02,945 | INFO     | sufficient remaining disk space (418242363392 B)
[2025-12-02 21:28:36] 2025-12-03 04:28:02,945 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 21:28:36] 2025-12-03 04:28:02,945 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 21:28:36] 2025-12-03 04:28:02,945 | INFO     | update_server=False
[2025-12-02 21:28:36] 2025-12-03 04:28:02,945 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 21:28:36] 2025-12-03 04:28:02,945 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 21:28:36] 2025-12-03 04:28:02,946 | INFO     | aborting loop
[2025-12-02 21:28:36] 2025-12-03 04:28:02,946 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 21:28:36] 2025-12-03 04:28:02,946 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-02 21:28:36] 2025-12-03 04:28:02,946 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 21:28:36] 2025-12-03 04:28:02,946 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 21:28:36] 2025-12-03 04:28:02,946 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 21:28:36] 2025-12-03 04:28:03,105 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 21:28:36] 2025-12-03 04:28:03,192 | INFO     | all data control threads have been joined
[2025-12-02 21:28:36] 2025-12-03 04:28:03,297 | INFO     | all job control threads have been joined
[2025-12-02 21:28:36] 2025-12-03 04:28:03,950 | INFO     | [job] job monitor thread has finished
[2025-12-02 21:28:36] 2025-12-03 04:28:03,950 | INFO     | [job] retrieve thread has finished
[2025-12-02 21:28:36] 2025-12-03 04:28:03,951 | INFO     | [job] queue monitor thread has finished
[2025-12-02 21:28:36] 2025-12-03 04:28:03,959 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 21:28:36] 2025-12-03 04:28:03,967 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 21:28:36] 2025-12-03 04:28:03,992 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 21:28:36] 2025-12-03 04:28:04,197 | INFO     | [data] control thread has finished
[2025-12-02 21:28:36] 2025-12-03 04:28:04,292 | INFO     | all payload control threads have been joined
[2025-12-02 21:28:36] 2025-12-03 04:28:04,301 | INFO     | [job] control thread has finished
[2025-12-02 21:28:36] 2025-12-03 04:28:04,315 | INFO     | [payload] validate_post thread has finished
[2025-12-02 21:28:36] 2025-12-03 04:28:05,058 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 21:28:36] 2025-12-03 04:28:05,110 | INFO     | [data] copytool_out thread has finished
[2025-12-02 21:28:36] 2025-12-03 04:28:05,181 | INFO     | [payload] failed_post thread has finished
[2025-12-02 21:28:36] 2025-12-03 04:28:05,210 | INFO     | [job] validate thread has finished
[2025-12-02 21:28:36] 2025-12-03 04:28:05,260 | INFO     | [data] copytool_in thread has finished
[2025-12-02 21:28:36] 2025-12-03 04:28:05,297 | INFO     | [payload] control thread has finished
[2025-12-02 21:28:36] 2025-12-03 04:28:06,370 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 21:28:36] 2025-12-03 04:28:10,375 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 21:28:36] 2025-12-03 04:28:29,422 | INFO     | [monitor] cgroup control has ended
[2025-12-02 21:28:36] 2025-12-03 04:28:30,823 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125213288331072)>', '<ExcThread(monitor, started 125212523755264)>']
[2025-12-02 21:28:36] 2025-12-03 04:28:31,072 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 21:28:36] 2025-12-03 04:28:31,072 | INFO     | [monitor] control thread has ended
[2025-12-02 21:28:36] 2025-12-03 04:28:35,848 | INFO     | all workflow threads have been joined
[2025-12-02 21:28:36] 2025-12-03 04:28:35,848 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 21:28:36] 2025-12-03 04:28:35,848 | INFO     | traces error code: 0
[2025-12-02 21:28:36] 2025-12-03 04:28:35,848 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 21:28:36] 2025-12-03 04:28:35,921 [wrapper] ==== pilot stdout END ====
[2025-12-02 21:28:36] 2025-12-03 04:28:35,923 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 21:28:36] 2025-12-03 04:28:35,925 [wrapper] pilotpid: 2780278
[2025-12-02 21:28:36] 2025-12-03 04:28:35,927 [wrapper] Pilot exit status: 0
[2025-12-02 21:28:36] 2025-12-03 04:28:35,934 [wrapper] pandaids: 6908987557
[2025-12-02 21:28:36] 2025-12-03 04:28:35,966 [wrapper] cleanup supervisor_pilot 2878834 2780279
[2025-12-02 21:28:36] 2025-12-03 04:28:35,968 [wrapper] Test setup, not cleaning
[2025-12-02 21:28:36] 2025-12-03 04:28:35,970 [wrapper] apfmon messages muted
[2025-12-02 21:28:36] 2025-12-03 04:28:35,972 [wrapper] ==== wrapper stdout END ====
[2025-12-02 21:28:36] 2025-12-03 04:28:35,974 [wrapper] ==== wrapper stderr END ====
[2025-12-02 21:28:36]  *** Error codes and diagnostics ***
[2025-12-02 21:28:36]     "exeErrorCode": 0,
[2025-12-02 21:28:36]     "exeErrorDiag": "",
[2025-12-02 21:28:36]     "pilotErrorCode": 0,
[2025-12-02 21:28:36]     "pilotErrorDiag": "",
[2025-12-02 21:28:36]  *** Listing of results directory ***
[2025-12-02 21:28:36] total 459424
[2025-12-02 21:28:36] -rw-r--r-- 1 boinc boinc    576529 Nov 30 04:05 pilot3.tar.gz
[2025-12-02 21:28:36] -rwx------ 1 boinc boinc     36292 Nov 30 04:08 runpilot2-wrapper.sh
[2025-12-02 21:28:36] -rw-r--r-- 1 boinc boinc      5112 Nov 30 04:08 queuedata.json
[2025-12-02 21:28:36] -rw-r--r-- 1 boinc boinc       100 Dec  2 19:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 21:28:36] -rwxr-xr-x 1 boinc boinc      7986 Dec  2 19:18 run_atlas
[2025-12-02 21:28:36] -rw-r--r-- 1 boinc boinc       105 Dec  2 19:18 job.xml
[2025-12-02 21:28:36] -rw-r--r-- 2 boinc boinc    589977 Dec  2 19:18 input.tar.gz
[2025-12-02 21:28:36] -rw-r--r-- 1 boinc boinc      9721 Dec  2 19:18 init_data.xml
[2025-12-02 21:28:36] -rw-r--r-- 2 boinc boinc 271970053 Dec  2 19:18 EVNT.46965009._000066.pool.root.1
[2025-12-02 21:28:36] -rw-r--r-- 2 boinc boinc     15847 Dec  2 19:18 start_atlas.sh
[2025-12-02 21:28:36] drwxrwx--x 2 boinc boinc      4096 Dec  2 19:18 shared
[2025-12-02 21:28:36] -rw-r--r-- 1 boinc boinc         0 Dec  2 19:18 boinc_lockfile
[2025-12-02 21:28:36] -rw-r--r-- 1 boinc boinc      2652 Dec  2 19:18 pandaJob.out
[2025-12-02 21:28:36] -rw------- 1 boinc boinc    989292 Dec  2 19:18 agis_schedconf.cvmfs.json
[2025-12-02 21:28:36] -rw------- 1 boinc boinc   1516240 Dec  2 19:18 agis_ddmendpoints.agis.ALL.json
[2025-12-02 21:28:36] drwx------ 5 boinc boinc      4096 Dec  2 19:18 pilot3
[2025-12-02 21:28:36] -rw-r--r-- 1 boinc boinc       530 Dec  2 21:27 boinc_task_state.xml
[2025-12-02 21:28:36] -rw------- 1 boinc boinc 191662681 Dec  2 21:27 HITS.46965017._001700.pool.root.1
[2025-12-02 21:28:36] -rw------- 1 boinc boinc        95 Dec  2 21:27 pilot_heartbeat.json
[2025-12-02 21:28:36] -rw------- 1 boinc boinc      1025 Dec  2 21:27 memory_monitor_summary.json
[2025-12-02 21:28:36] -rw------- 1 boinc boinc    305054 Dec  2 21:27 log.46965017._001700.job.log.tgz.1
[2025-12-02 21:28:36] -rw------- 1 boinc boinc      7732 Dec  2 21:28 heartbeat.json
[2025-12-02 21:28:36] -rw-r--r-- 1 boinc boinc      8192 Dec  2 21:28 boinc_mmap_file
[2025-12-02 21:28:36] -rw-r--r-- 1 boinc boinc        27 Dec  2 21:28 wrapper_checkpoint.txt
[2025-12-02 21:28:36] -rw------- 1 boinc boinc      4560 Dec  2 21:28 pilotlog.txt
[2025-12-02 21:28:36] -rw------- 1 boinc boinc   1145444 Dec  2 21:28 log.46965017._001700.job.log.1
[2025-12-02 21:28:36] -rw------- 1 boinc boinc       357 Dec  2 21:28 output.list
[2025-12-02 21:28:36] -rw-r--r-- 1 boinc boinc       620 Dec  2 21:28 runtime_log
[2025-12-02 21:28:36] -rw------- 1 boinc boinc   1474560 Dec  2 21:28 result.tar.gz
[2025-12-02 21:28:36] -rw-r--r-- 1 boinc boinc      8919 Dec  2 21:28 runtime_log.err
[2025-12-02 21:28:36] -rw------- 1 boinc boinc       656 Dec  2 21:28 nYwNDmSTuj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmiePKDmMtrDmm.diag
[2025-12-02 21:28:36] -rw-r--r-- 1 boinc boinc     21200 Dec  2 21:28 stderr.txt
[2025-12-02 21:28:36] HITS file was successfully produced:
[2025-12-02 21:28:36] -rw------- 1 boinc boinc 191662681 Dec  2 21:27 shared/HITS.pool.root.1
[2025-12-02 21:28:36]  *** Contents of shared directory: ***
[2025-12-02 21:28:36] total 454812
[2025-12-02 21:28:36] -rw-r--r-- 2 boinc boinc    589977 Dec  2 19:18 input.tar.gz
[2025-12-02 21:28:36] -rw-r--r-- 2 boinc boinc 271970053 Dec  2 19:18 ATLAS.root_0
[2025-12-02 21:28:36] -rw-r--r-- 2 boinc boinc     15847 Dec  2 19:18 start_atlas.sh
[2025-12-02 21:28:36] -rw------- 1 boinc boinc 191662681 Dec  2 21:27 HITS.pool.root.1
[2025-12-02 21:28:36] -rw------- 1 boinc boinc   1474560 Dec  2 21:28 result.tar.gz
21:28:37 (2776416): run_atlas exited; CPU time 30358.036588
21:28:37 (2776416): called boinc_finish(0)

</stderr_txt>
]]>

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