Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:13:02 (3674799): wrapper (7.7.26015): starting
21:13:02 (3674799): wrapper: running run_atlas (--nthreads 8)
[2025-12-02 21:13:02] Arguments: --nthreads 8
[2025-12-02 21:13:02] Threads: 8
[2025-12-02 21:13:02] Checking for CVMFS
[2025-12-02 21:13:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 21:13:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 21:13:02] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 21:13:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 21:13:04] 2.13.3.0 7100 39452 233444 153576 1 987 35244933 40960001 51628 16776704 0 531812232 99.700 379917372 47875 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-02 21:13:04] CVMFS is ok
[2025-12-02 21:13:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 21:13:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 21:13:04] Further information can be found at the LHC@home message board.
[2025-12-02 21:13:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 21:13:04] Checking for apptainer binary...
[2025-12-02 21:13:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 21:13:04] Running /usr/bin/apptainer --version
[2025-12-02 21:13:04] apptainer version 1.4.4-1.el9
[2025-12-02 21:13:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 21:13:05] c8-6-10.aglt2.org
[2025-12-02 21:13:05] apptainer works
[2025-12-02 21:13:05] Set ATHENA_PROC_NUMBER=8
[2025-12-02 21:13:05] Set ATHENA_CORE_NUMBER=8
[2025-12-02 21:13:05] Starting ATLAS job with PandaID=6908987353
[2025-12-02 21:13:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 23:18:52]  *** The last 200 lines of the pilot log: ***
[2025-12-02 23:18:52] 2025-12-03 04:18:06,059 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 23:18:52] 2025-12-03 04:18:06,343 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-02 23:18:52] 2025-12-03 04:18:06,352 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9937265624985
[2025-12-02 23:18:52] 2025-12-03 04:18:06,376 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6908987353/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 23:18:52] 2025-12-03 04:18:06,377 | INFO     | extracted standard info from prmon json
[2025-12-02 23:18:52] 2025-12-03 04:18:06,377 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 23:18:52] 2025-12-03 04:18:06,377 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 23:18:52] 2025-12-03 04:18:06,381 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-02 23:18:52] 2025-12-03 04:18:06,381 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-02 23:18:52] 2025-12-03 04:18:06,382 | INFO     | fitting pss+swap vs Time
[2025-12-02 23:18:52] 2025-12-03 04:18:06,382 | INFO     | sum of square deviations: 509439408.6525423
[2025-12-02 23:18:52] 2025-12-03 04:18:06,383 | INFO     | sum of deviations: 17271117993.025436
[2025-12-02 23:18:52] 2025-12-03 04:18:06,383 | INFO     | mean x: 1764731838.5847456
[2025-12-02 23:18:52] 2025-12-03 04:18:06,383 | INFO     | mean y: 2564995.3474576273
[2025-12-02 23:18:52] 2025-12-03 04:18:06,383 | INFO     | intersect: -59825731152.49466
[2025-12-02 23:18:52] 2025-12-03 04:18:06,383 | INFO     | chi2: 6.648555899662649
[2025-12-02 23:18:52] 2025-12-03 04:18:06,383 | INFO     | sum of square deviations: 447385481.1150444
[2025-12-02 23:18:52] 2025-12-03 04:18:06,383 | INFO     | sum of deviations: 25229354284.902664
[2025-12-02 23:18:52] 2025-12-03 04:18:06,383 | INFO     | mean x: 1764731686.0884955
[2025-12-02 23:18:52] 2025-12-03 04:18:06,383 | INFO     | mean y: 2583914.309734513
[2025-12-02 23:18:52] 2025-12-03 04:18:06,384 | INFO     | intersect: -99515712511.29837
[2025-12-02 23:18:52] 2025-12-03 04:18:06,384 | INFO     | chi2: 6.057207757058246
[2025-12-02 23:18:52] 2025-12-03 04:18:06,384 | INFO     | current chi2=6.057207757058246 (change=8.894384758567018 %)
[2025-12-02 23:18:52] 2025-12-03 04:18:06,384 | INFO     | right removable region: 112
[2025-12-02 23:18:52] 2025-12-03 04:18:06,384 | INFO     | sum of square deviations: 447379381.1150444
[2025-12-02 23:18:52] 2025-12-03 04:18:06,384 | INFO     | sum of deviations: -22893491500.46902
[2025-12-02 23:18:52] 2025-12-03 04:18:06,384 | INFO     | mean x: 1764731991.0884955
[2025-12-02 23:18:52] 2025-12-03 04:18:06,384 | INFO     | mean y: 2663471.946902655
[2025-12-02 23:18:52] 2025-12-03 04:18:06,384 | INFO     | intersect: 90308293422.74046
[2025-12-02 23:18:52] 2025-12-03 04:18:06,384 | INFO     | chi2: 1.9652234301816927
[2025-12-02 23:18:52] 2025-12-03 04:18:06,384 | INFO     | current chi2=1.9652234301816927 (change=70.44134907128615 %)
[2025-12-02 23:18:52] 2025-12-03 04:18:06,384 | INFO     | sum of square deviations: 390582280.2499988
[2025-12-02 23:18:52] 2025-12-03 04:18:06,385 | INFO     | sum of deviations: -38689573122.08334
[2025-12-02 23:18:52] 2025-12-03 04:18:06,385 | INFO     | mean x: 1764732143.5833333
[2025-12-02 23:18:52] 2025-12-03 04:18:06,385 | INFO     | mean y: 2705190.175925926
[2025-12-02 23:18:52] 2025-12-03 04:18:06,385 | INFO     | intersect: 174810259865.61224
[2025-12-02 23:18:52] 2025-12-03 04:18:06,385 | INFO     | chi2: 0.8872331984494858
[2025-12-02 23:18:52] 2025-12-03 04:18:06,385 | INFO     | current chi2=0.8872331984494858 (change=54.853316685347195 %)
[2025-12-02 23:18:52] 2025-12-03 04:18:06,385 | INFO     | sum of square deviations: 338814504.52427226
[2025-12-02 23:18:52] 2025-12-03 04:18:06,385 | INFO     | sum of deviations: -36457204391.71846
[2025-12-02 23:18:52] 2025-12-03 04:18:06,385 | INFO     | mean x: 1764732296.0679612
[2025-12-02 23:18:52] 2025-12-03 04:18:06,385 | INFO     | mean y: 2698474.3883495145
[2025-12-02 23:18:52] 2025-12-03 04:18:06,385 | INFO     | intersect: 189891871326.51233
[2025-12-02 23:18:52] 2025-12-03 04:18:06,385 | INFO     | chi2: 0.8659616290551897
[2025-12-02 23:18:52] 2025-12-03 04:18:06,385 | INFO     | current chi2=0.8659616290551897 (change=2.397517296632941 %)
[2025-12-02 23:18:52] 2025-12-03 04:18:06,385 | INFO     | left removable region: 30
[2025-12-02 23:18:52] 2025-12-03 04:18:06,386 | INFO     | sum of square deviations: 170956686.0609755
[2025-12-02 23:18:52] 2025-12-03 04:18:06,390 | INFO     | sum of deviations: -16541001969.536585
[2025-12-02 23:18:52] 2025-12-03 04:18:06,390 | INFO     | mean x: 1764732570.5731707
[2025-12-02 23:18:52] 2025-12-03 04:18:06,390 | INFO     | mean y: 2685722.7560975607
[2025-12-02 23:18:52] 2025-12-03 04:18:06,390 | INFO     | intersect: 170750292020.7909
[2025-12-02 23:18:52] 2025-12-03 04:18:06,390 | INFO     | chi2: 0.1528034233270163
[2025-12-02 23:18:52] 2025-12-03 04:18:06,390 | INFO     | current memory leak: -96.76 B/s (using 82 data points, chi2=0.15)
[2025-12-02 23:18:52] 2025-12-03 04:18:06,390 | INFO     | could have reported an average CPU frequency of 3799 MHz (8 samples)
[2025-12-02 23:18:52] 2025-12-03 04:18:06,391 | INFO     | ..............................
[2025-12-02 23:18:52] 2025-12-03 04:18:06,391 | INFO     | . Timing measurements:
[2025-12-02 23:18:52] 2025-12-03 04:18:06,391 | INFO     | . get job = 0 s
[2025-12-02 23:18:52] 2025-12-03 04:18:06,391 | INFO     | . initial setup = 7 s
[2025-12-02 23:18:52] 2025-12-03 04:18:06,391 | INFO     | . payload setup = 59 s
[2025-12-02 23:18:52] 2025-12-03 04:18:06,391 | INFO     | . stage-in = 0 s
[2025-12-02 23:18:52] 2025-12-03 04:18:06,391 | INFO     | . payload execution = 7176 s
[2025-12-02 23:18:52] 2025-12-03 04:18:06,391 | INFO     | . stage-out = 2 s
[2025-12-02 23:18:52] 2025-12-03 04:18:06,391 | INFO     | . log creation = 0 s
[2025-12-02 23:18:52] 2025-12-03 04:18:06,391 | INFO     | ..............................
[2025-12-02 23:18:52] 2025-12-03 04:18:06,486 | INFO     | 
[2025-12-02 23:18:52] 2025-12-03 04:18:06,487 | INFO     | job summary report
[2025-12-02 23:18:52] 2025-12-03 04:18:06,487 | INFO     | --------------------------------------------------
[2025-12-02 23:18:52] 2025-12-03 04:18:06,487 | INFO     | PanDA job id: 6908987353
[2025-12-02 23:18:52] 2025-12-03 04:18:06,487 | INFO     | task id: 46965017
[2025-12-02 23:18:52] 2025-12-03 04:18:06,487 | INFO     | errors: (none)
[2025-12-02 23:18:52] 2025-12-03 04:18:06,487 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 23:18:52] 2025-12-03 04:18:06,487 | INFO     | pilot state: finished 
[2025-12-02 23:18:52] 2025-12-03 04:18:06,487 | INFO     | transexitcode: 0
[2025-12-02 23:18:52] 2025-12-03 04:18:06,487 | INFO     | exeerrorcode: 0
[2025-12-02 23:18:52] 2025-12-03 04:18:06,487 | INFO     | exeerrordiag: 
[2025-12-02 23:18:52] 2025-12-03 04:18:06,487 | INFO     | exitcode: 0
[2025-12-02 23:18:52] 2025-12-03 04:18:06,487 | INFO     | exitmsg: OK
[2025-12-02 23:18:52] 2025-12-03 04:18:06,487 | INFO     | cpuconsumptiontime: 25314 s
[2025-12-02 23:18:52] 2025-12-03 04:18:06,487 | INFO     | nevents: 400
[2025-12-02 23:18:52] 2025-12-03 04:18:06,487 | INFO     | neventsw: 0
[2025-12-02 23:18:52] 2025-12-03 04:18:06,487 | INFO     | pid: 3699491
[2025-12-02 23:18:52] 2025-12-03 04:18:06,487 | INFO     | pgrp: 3699491
[2025-12-02 23:18:52] 2025-12-03 04:18:06,487 | INFO     | corecount: 8
[2025-12-02 23:18:52] 2025-12-03 04:18:06,487 | INFO     | event service: False
[2025-12-02 23:18:52] 2025-12-03 04:18:06,487 | INFO     | sizes: {0: 2283809, 1: 2284008, 2: 2284008, 12: 2284036, 23: 2284064, 37: 2284092, 47: 2284248, 58: 2284304, 65: 2284594, 69: 2284622, 7237: 2312100, 7240: 2321098
[2025-12-02 23:18:52] 2025-12-03 04:18:06,487 | INFO     | --------------------------------------------------
[2025-12-02 23:18:52] 2025-12-03 04:18:06,487 | INFO     | 
[2025-12-02 23:18:52] 2025-12-03 04:18:06,487 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-12-02 23:18:52] 2025-12-03 04:18:06,530 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 23:18:52] 2025-12-03 04:18:06,530 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 23:18:52] 2025-12-03 04:18:06,530 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 23:18:52] 2025-12-03 04:18:06,530 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 23:18:52] 2025-12-03 04:18:06,530 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 23:18:52] 2025-12-03 04:18:06,530 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 23:18:52] 2025-12-03 04:18:06,530 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 23:18:52] 2025-12-03 04:18:06,530 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 23:18:52] 2025-12-03 04:18:06,531 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 23:18:52] 2025-12-03 04:18:06,531 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 23:18:52] 2025-12-03 04:18:06,531 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 23:18:52] 2025-12-03 04:18:06,531 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 23:18:52] 2025-12-03 04:18:06,531 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 23:18:52] 2025-12-03 04:18:06,531 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 23:18:52] 2025-12-03 04:18:06,531 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 23:18:52] 2025-12-03 04:18:06,531 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 23:18:52] 2025-12-03 04:18:06,531 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 23:18:52] 2025-12-03 04:18:06,531 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 23:18:52] 2025-12-03 04:18:06,531 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 23:18:52] 2025-12-03 04:18:06,531 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 23:18:52] 2025-12-03 04:18:06,531 | INFO     | job 6908987353 has completed (purged errors)
[2025-12-02 23:18:52] 2025-12-03 04:18:06,531 | INFO     | overall cleanup function is called
[2025-12-02 23:18:52] 2025-12-03 04:18:07,544 | INFO     | --- collectZombieJob: --- 10, [3699491]
[2025-12-02 23:18:52] 2025-12-03 04:18:07,544 | INFO     | zombie collector waiting for pid 3699491
[2025-12-02 23:18:52] 2025-12-03 04:18:07,548 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 23:18:52] 2025-12-03 04:18:07,548 | INFO     | collected zombie processes
[2025-12-02 23:18:52] 2025-12-03 04:18:07,548 | INFO     | will attempt to kill all subprocesses of pid=3699491
[2025-12-02 23:18:52] 2025-12-03 04:18:08,799 | INFO     | process IDs to be killed: [3699491] (in reverse order)
[2025-12-02 23:18:52] 2025-12-03 04:18:09,200 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 23:18:52] 2025-12-03 04:18:09,200 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 23:18:52] 2025-12-03 04:18:09,283 | INFO     | did not find any defunct processes belonging to 3699491
[2025-12-02 23:18:52] 2025-12-03 04:18:09,419 | INFO     | did not find any defunct processes belonging to 3699491
[2025-12-02 23:18:52] 2025-12-03 04:18:09,428 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 23:18:52] 2025-12-03 04:18:09,428 | INFO     | ready for new job
[2025-12-02 23:18:52] 2025-12-03 04:18:09,428 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 23:18:52] 2025-12-03 04:18:09,431 | INFO     | ***************************************
[2025-12-02 23:18:52] 2025-12-03 04:18:09,433 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 23:18:52] 2025-12-03 04:18:09,433 | INFO     | ***************************************
[2025-12-02 23:18:52] 2025-12-03 04:18:09,433 | INFO     | 
[2025-12-02 23:18:52] 2025-12-03 04:18:09,455 | INFO     | architecture information:
[2025-12-02 23:18:52] 2025-12-03 04:18:09,478 | INFO     | executing command: cat /etc/os-release
[2025-12-02 23:18:52] 2025-12-03 04:18:09,578 | INFO     | cat /etc/os-release:
[2025-12-02 23:18:52] NAME="CentOS Linux"
[2025-12-02 23:18:52] VERSION="7 (Core)"
[2025-12-02 23:18:52] ID="centos"
[2025-12-02 23:18:52] ID_LIKE="rhel fedora"
[2025-12-02 23:18:52] VERSION_ID="7"
[2025-12-02 23:18:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 23:18:52] ANSI_COLOR="0;31"
[2025-12-02 23:18:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 23:18:52] HOME_URL="https://www.centos.org/"
[2025-12-02 23:18:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 23:18:52] 
[2025-12-02 23:18:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 23:18:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 23:18:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 23:18:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 23:18:52] 
[2025-12-02 23:18:52] 2025-12-03 04:18:09,578 | INFO     | ***************************************
[2025-12-02 23:18:52] 2025-12-03 04:18:10,082 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-12-02 23:18:52] 2025-12-03 04:18:10,143 | INFO     | sufficient remaining disk space (161051836416 B)
[2025-12-02 23:18:52] 2025-12-03 04:18:10,145 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 23:18:52] 2025-12-03 04:18:10,145 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 23:18:52] 2025-12-03 04:18:10,145 | INFO     | update_server=False
[2025-12-02 23:18:52] 2025-12-03 04:18:10,145 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 23:18:52] 2025-12-03 04:18:10,145 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 23:18:52] 2025-12-03 04:18:10,145 | INFO     | aborting loop
[2025-12-02 23:18:52] 2025-12-03 04:18:10,502 | INFO     | all job control threads have been joined
[2025-12-02 23:18:52] 2025-12-03 04:18:10,537 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 23:18:52] 2025-12-03 04:18:10,648 | INFO     | all payload control threads have been joined
[2025-12-02 23:18:52] 2025-12-03 04:18:11,102 | INFO     | all data control threads have been joined
[2025-12-02 23:18:52] 2025-12-03 04:18:11,151 | INFO     | [job] retrieve thread has finished
[2025-12-02 23:18:52] 2025-12-03 04:18:11,151 | INFO     | [job] job monitor thread has finished
[2025-12-02 23:18:52] 2025-12-03 04:18:11,189 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 23:18:52] 2025-12-03 04:18:11,350 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 23:18:52] 2025-12-03 04:18:11,508 | INFO     | [payload] failed_post thread has finished
[2025-12-02 23:18:52] 2025-12-03 04:18:11,526 | INFO     | [job] control thread has finished
[2025-12-02 23:18:52] 2025-12-03 04:18:11,545 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 23:18:52] 2025-12-03 04:18:11,608 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 23:18:52] 2025-12-03 04:18:11,610 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 23:18:52] 2025-12-03 04:18:11,654 | INFO     | [payload] control thread has finished
[2025-12-02 23:18:52] 2025-12-03 04:18:11,817 | INFO     | [data] copytool_in thread has finished
[2025-12-02 23:18:52] 2025-12-03 04:18:12,009 | INFO     | [payload] validate_post thread has finished
[2025-12-02 23:18:52] 2025-12-03 04:18:12,108 | INFO     | [data] control thread has finished
[2025-12-02 23:18:52] 2025-12-03 04:18:12,357 | INFO     | [job] validate thread has finished
[2025-12-02 23:18:52] 2025-12-03 04:18:12,357 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 23:18:52] 2025-12-03 04:18:12,551 | INFO     | [job] queue monitor thread has finished
[2025-12-02 23:18:52] 2025-12-03 04:18:12,562 | INFO     | [data] copytool_out thread has finished
[2025-12-02 23:18:52] 2025-12-03 04:18:15,619 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 23:18:52] 2025-12-03 04:18:41,290 | INFO     | PID=3684068 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-02 23:18:52] 2025-12-03 04:18:41,290 | INFO     | .. there are 61 such processes running
[2025-12-02 23:18:52] 2025-12-03 04:18:41,291 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 23:18:52] 2025-12-03 04:18:41,291 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 23:18:52] 2025-12-03 04:18:41,291 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 23:18:52] 2025-12-03 04:18:44,044 | INFO     | [monitor] cgroup control has ended
[2025-12-02 23:18:52] 2025-12-03 04:18:45,549 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140244016744256)>', '<ExcThread(monitor, started 140243650975488)>']
[2025-12-02 23:18:52] 2025-12-03 04:18:46,320 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 23:18:52] 2025-12-03 04:18:46,320 | INFO     | [monitor] control thread has ended
[2025-12-02 23:18:52] 2025-12-03 04:18:50,575 | INFO     | all workflow threads have been joined
[2025-12-02 23:18:52] 2025-12-03 04:18:50,575 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 23:18:52] 2025-12-03 04:18:50,575 | INFO     | traces error code: 0
[2025-12-02 23:18:52] 2025-12-03 04:18:50,575 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 23:18:52] 2025-12-03 04:18:51,015 [wrapper] ==== pilot stdout END ====
[2025-12-02 23:18:52] 2025-12-03 04:18:51,036 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 23:18:52] 2025-12-03 04:18:51,075 [wrapper] pilotpid: 3684068
[2025-12-02 23:18:52] 2025-12-03 04:18:51,139 [wrapper] Pilot exit status: 0
[2025-12-02 23:18:52] 2025-12-03 04:18:51,240 [wrapper] pandaids: 6908987353
[2025-12-02 23:18:52] 2025-12-03 04:18:51,636 [wrapper] cleanup supervisor_pilot  438732 3684069
[2025-12-02 23:18:52] 2025-12-03 04:18:51,657 [wrapper] Test setup, not cleaning
[2025-12-02 23:18:52] 2025-12-03 04:18:51,700 [wrapper] apfmon messages muted
[2025-12-02 23:18:52] 2025-12-03 04:18:51,728 [wrapper] ==== wrapper stdout END ====
[2025-12-02 23:18:52] 2025-12-03 04:18:51,755 [wrapper] ==== wrapper stderr END ====
[2025-12-02 23:18:52]  *** Error codes and diagnostics ***
[2025-12-02 23:18:52]     "exeErrorCode": 0,
[2025-12-02 23:18:52]     "exeErrorDiag": "",
[2025-12-02 23:18:52]     "pilotErrorCode": 0,
[2025-12-02 23:18:52]     "pilotErrorDiag": "",
[2025-12-02 23:18:52]  *** Listing of results directory ***
[2025-12-02 23:18:52] total 466288
[2025-12-02 23:18:52] -rw-r--r--. 1 boincer umatlas    576529 Nov 30 06:05 pilot3.tar.gz
[2025-12-02 23:18:52] -rwx------. 1 boincer umatlas     36292 Nov 30 06:08 runpilot2-wrapper.sh
[2025-12-02 23:18:52] -rw-r--r--. 1 boincer umatlas      5112 Nov 30 06:08 queuedata.json
[2025-12-02 23:18:52] -rw-r--r--. 1 boincer umatlas       100 Dec  2 21:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 23:18:52] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  2 21:13 run_atlas
[2025-12-02 23:18:52] -rw-r--r--. 1 boincer umatlas       105 Dec  2 21:13 job.xml
[2025-12-02 23:18:52] -rw-r--r--. 2 boincer umatlas 276483200 Dec  2 21:13 EVNT.46965009._000058.pool.root.1
[2025-12-02 23:18:52] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 21:13 start_atlas.sh
[2025-12-02 23:18:52] drwxrwx--x. 2 boincer umatlas      4096 Dec  2 21:13 shared
[2025-12-02 23:18:52] -rw-r--r--. 2 boincer umatlas    589976 Dec  2 21:13 input.tar.gz
[2025-12-02 23:18:52] -rw-r--r--. 1 boincer umatlas         0 Dec  2 21:13 boinc_lockfile
[2025-12-02 23:18:52] -rw-r--r--. 1 boincer umatlas      2652 Dec  2 21:13 pandaJob.out
[2025-12-02 23:18:52] -rw-------. 1 boincer umatlas        57 Dec  2 21:13 setup.sh.local
[2025-12-02 23:18:52] -rw-------. 1 boincer umatlas    989300 Dec  2 21:14 agis_schedconf.cvmfs.json
[2025-12-02 23:18:52] -rw-------. 1 boincer umatlas   1516240 Dec  2 21:14 agis_ddmendpoints.agis.ALL.json
[2025-12-02 23:18:52] drwx------. 5 boincer umatlas      4096 Dec  2 21:14 pilot3
[2025-12-02 23:18:52] -rw-r--r--. 1 boincer umatlas      7170 Dec  2 23:13 init_data.xml
[2025-12-02 23:18:52] -rw-------. 1 boincer umatlas 194483658 Dec  2 23:16 HITS.46965017._001511.pool.root.1
[2025-12-02 23:18:52] -rw-r--r--. 1 boincer umatlas       530 Dec  2 23:16 boinc_task_state.xml
[2025-12-02 23:18:52] -rw-------. 1 boincer umatlas      1039 Dec  2 23:16 memory_monitor_summary.json
[2025-12-02 23:18:52] -rw-------. 1 boincer umatlas    358265 Dec  2 23:16 log.46965017._001511.job.log.tgz.1
[2025-12-02 23:18:52] -rw-------. 1 boincer umatlas        95 Dec  2 23:18 pilot_heartbeat.json
[2025-12-02 23:18:52] -rw-------. 1 boincer umatlas      7784 Dec  2 23:18 heartbeat.json
[2025-12-02 23:18:52] -rw-------. 1 boincer umatlas      4825 Dec  2 23:18 pilotlog.txt
[2025-12-02 23:18:52] -rw-r--r--. 1 boincer umatlas      8192 Dec  2 23:18 boinc_mmap_file
[2025-12-02 23:18:52] -rw-r--r--. 1 boincer umatlas        27 Dec  2 23:18 wrapper_checkpoint.txt
[2025-12-02 23:18:52] -rw-------. 1 boincer umatlas    941635 Dec  2 23:18 log.46965017._001511.job.log.1
[2025-12-02 23:18:52] -rw-------. 1 boincer umatlas       357 Dec  2 23:18 output.list
[2025-12-02 23:18:52] -rw-r--r--. 1 boincer umatlas       620 Dec  2 23:18 runtime_log
[2025-12-02 23:18:52] -rw-------. 1 boincer umatlas   1320960 Dec  2 23:18 result.tar.gz
[2025-12-02 23:18:52] -rw-------. 1 boincer umatlas       655 Dec  2 23:18 wZAMDmITuj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmQdPKDmOY7l8n.diag
[2025-12-02 23:18:52] -rw-r--r--. 1 boincer umatlas      9337 Dec  2 23:18 runtime_log.err
[2025-12-02 23:18:52] -rw-r--r--. 1 boincer umatlas     21346 Dec  2 23:18 stderr.txt
[2025-12-02 23:18:52] HITS file was successfully produced:
[2025-12-02 23:18:52] -rw-------. 1 boincer umatlas 194483658 Dec  2 23:16 shared/HITS.pool.root.1
[2025-12-02 23:18:52]  *** Contents of shared directory: ***
[2025-12-02 23:18:52] total 461824
[2025-12-02 23:18:52] -rw-r--r--. 2 boincer umatlas 276483200 Dec  2 21:13 ATLAS.root_0
[2025-12-02 23:18:52] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 21:13 start_atlas.sh
[2025-12-02 23:18:52] -rw-r--r--. 2 boincer umatlas    589976 Dec  2 21:13 input.tar.gz
[2025-12-02 23:18:52] -rw-------. 1 boincer umatlas 194483658 Dec  2 23:16 HITS.pool.root.1
[2025-12-02 23:18:52] -rw-------. 1 boincer umatlas   1320960 Dec  2 23:18 result.tar.gz
23:18:53 (3674799): run_atlas exited; CPU time 25611.825804
23:18:53 (3674799): called boinc_finish(0)

</stderr_txt>
]]>

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