Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:48:49 (826949): wrapper (7.7.26015): starting
21:48:49 (826949): wrapper: running run_atlas (--nthreads 8)
[2025-12-02 21:48:49] Arguments: --nthreads 8
[2025-12-02 21:48:49] Threads: 8
[2025-12-02 21:48:49] Checking for CVMFS
[2025-12-02 21:48:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 21:48:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 21:48:50] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 21:48:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 21:48:51] 2.13.2.0 2325231 40131 171128 153577 2 724 21194347 40960000 27933 16776704 0 280901388 99.705 236380802 52015 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-02 21:48:51] CVMFS is ok
[2025-12-02 21:48:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 21:48:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 21:48:51] Further information can be found at the LHC@home message board.
[2025-12-02 21:48:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 21:48:51] Checking for apptainer binary...
[2025-12-02 21:48:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 21:48:51] Running /usr/bin/apptainer --version
[2025-12-02 21:48:51] apptainer version 1.4.4-1.el9
[2025-12-02 21:48:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 21:48:52] c-208-37.aglt2.org
[2025-12-02 21:48:52] apptainer works
[2025-12-02 21:48:52] Set ATHENA_PROC_NUMBER=8
[2025-12-02 21:48:52] Set ATHENA_CORE_NUMBER=8
[2025-12-02 21:48:52] Starting ATLAS job with PandaID=6895373263
[2025-12-02 21:48:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
01:00:03 (826949): BOINC client no longer exists - exiting
01:00:03 (826949): timer handler: client dead, exiting
01:49:25 (1848489): wrapper (7.7.26015): starting
01:49:25 (1848489): wrapper: running run_atlas (--nthreads 8)
[2025-12-03 01:49:25] Arguments: --nthreads 8
[2025-12-03 01:49:25] Threads: 8
[2025-12-03 01:49:25] This job has been restarted, cleaning up previous attempt
[2025-12-03 01:49:25] Checking for CVMFS
[2025-12-03 01:49:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-03 01:49:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-03 01:49:27] Running cvmfs_config stat atlas.cern.ch
[2025-12-03 01:49:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-03 01:49:27] 2.13.2.0 2325231 40371 171468 153583 1 754 35039002 40960000 29627 16776704 0 282323895 99.702 238718169 52008 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-03 01:49:27] CVMFS is ok
[2025-12-03 01:49:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-03 01:49:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-03 01:49:27] Further information can be found at the LHC@home message board.
[2025-12-03 01:49:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-03 01:49:27] Checking for apptainer binary...
[2025-12-03 01:49:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-03 01:49:27] Running /usr/bin/apptainer --version
[2025-12-03 01:49:30] apptainer version 1.4.4-1.el9
[2025-12-03 01:49:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-03 01:49:30] c-208-37.aglt2.org
[2025-12-03 01:49:30] apptainer works
[2025-12-03 01:49:30] Set ATHENA_PROC_NUMBER=8
[2025-12-03 01:49:30] Set ATHENA_CORE_NUMBER=8
[2025-12-03 01:49:30] Starting ATLAS job with PandaID=6895373263
[2025-12-03 01:49:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
03:20:05 (1848489): BOINC client no longer exists - exiting
03:20:05 (1848489): timer handler: client dead, exiting
03:27:14 (2172574): wrapper (7.7.26015): starting
03:27:14 (2172574): wrapper: running run_atlas (--nthreads 10)
[2025-12-03 03:27:14] Arguments: --nthreads 10
[2025-12-03 03:27:14] Threads: 10
[2025-12-03 03:27:14] This job has been restarted, cleaning up previous attempt
[2025-12-03 03:27:14] Checking for CVMFS
[2025-12-03 03:27:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-03 03:27:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-03 03:27:14] Running cvmfs_config stat atlas.cern.ch
[2025-12-03 03:27:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-03 03:27:14] 2.13.2.0 2325231 40469 174916 153586 0 369 36249008 40960001 25568 16776704 0 282899197 99.702 239242793 52033 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-03 03:27:14] CVMFS is ok
[2025-12-03 03:27:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-03 03:27:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-03 03:27:14] Further information can be found at the LHC@home message board.
[2025-12-03 03:27:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-03 03:27:14] Checking for apptainer binary...
[2025-12-03 03:27:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-03 03:27:14] Running /usr/bin/apptainer --version
[2025-12-03 03:27:14] apptainer version 1.4.4-1.el9
[2025-12-03 03:27:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-03 03:27:15] c-208-37.aglt2.org
[2025-12-03 03:27:15] apptainer works
[2025-12-03 03:27:15] Set ATHENA_PROC_NUMBER=10
[2025-12-03 03:27:15] Set ATHENA_CORE_NUMBER=10
[2025-12-03 03:27:15] Starting ATLAS job with PandaID=6895373263
[2025-12-03 03:27:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 12:38:32]  *** The last 200 lines of the pilot log: ***
[2025-12-03 12:38:32] 2025-12-03 17:37:32,361 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 12:38:32] 2025-12-03 17:37:33,772 | INFO     | time since job start (33006s) is within the limit (172800.0s)
[2025-12-03 12:38:32] 2025-12-03 17:37:33,814 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-03 12:38:32] 2025-12-03 17:37:33,819 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3790.218234374999
[2025-12-03 12:38:32] 2025-12-03 17:37:33,831 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6895373263/memory_monitor_summary.json (trf name=prmon)
[2025-12-03 12:38:32] 2025-12-03 17:37:33,832 | INFO     | extracted standard info from prmon json
[2025-12-03 12:38:32] 2025-12-03 17:37:33,832 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 12:38:32] 2025-12-03 17:37:33,832 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 12:38:32] 2025-12-03 17:37:33,837 | INFO     | fitting pss+swap vs Time
[2025-12-03 12:38:32] 2025-12-03 17:37:33,838 | INFO     | sum of square deviations: 49092175538.82809
[2025-12-03 12:38:32] 2025-12-03 17:37:33,842 | INFO     | sum of deviations: 600488285814.5347
[2025-12-03 12:38:32] 2025-12-03 17:37:33,842 | INFO     | mean x: 1764766952.624769
[2025-12-03 12:38:32] 2025-12-03 17:37:33,842 | INFO     | mean y: 3136773.2735674675
[2025-12-03 12:38:32] 2025-12-03 17:37:33,842 | INFO     | intersect: -21583233572.152054
[2025-12-03 12:38:32] 2025-12-03 17:37:33,842 | INFO     | chi2: 5.090543858495527
[2025-12-03 12:38:32] 2025-12-03 17:37:33,843 | INFO     | sum of square deviations: 47743985497.52049
[2025-12-03 12:38:32] 2025-12-03 17:37:33,846 | INFO     | sum of deviations: 788205905692.8168
[2025-12-03 12:38:32] 2025-12-03 17:37:33,846 | INFO     | mean x: 1764766800.158582
[2025-12-03 12:38:32] 2025-12-03 17:37:33,846 | INFO     | mean y: 3157981.4962686566
[2025-12-03 12:38:32] 2025-12-03 17:37:33,846 | INFO     | intersect: -29131393722.986984
[2025-12-03 12:38:32] 2025-12-03 17:37:33,847 | INFO     | chi2: 2.142385041479716
[2025-12-03 12:38:32] 2025-12-03 17:37:33,847 | INFO     | current chi2=2.142385041479716 (change=57.91441737793254 %)
[2025-12-03 12:38:32] 2025-12-03 17:37:33,847 | INFO     | sum of square deviations: 46420595640.478455
[2025-12-03 12:38:32] 2025-12-03 17:37:33,851 | INFO     | sum of deviations: 761130372425.8608
[2025-12-03 12:38:32] 2025-12-03 17:37:33,851 | INFO     | mean x: 1764766647.685499
[2025-12-03 12:38:32] 2025-12-03 17:37:33,851 | INFO     | mean y: 3154854.2806026367
[2025-12-03 12:38:32] 2025-12-03 17:37:33,851 | INFO     | intersect: -28932654289.588394
[2025-12-03 12:38:32] 2025-12-03 17:37:33,851 | INFO     | chi2: 2.07832534807549
[2025-12-03 12:38:32] 2025-12-03 17:37:33,851 | INFO     | current chi2=2.07832534807549 (change=2.990111122134271 %)
[2025-12-03 12:38:32] 2025-12-03 17:37:33,851 | INFO     | right removable region: 530
[2025-12-03 12:38:32] 2025-12-03 17:37:33,852 | INFO     | sum of square deviations: 47742887819.45528
[2025-12-03 12:38:32] 2025-12-03 17:37:33,855 | INFO     | sum of deviations: 457647247728.85156
[2025-12-03 12:38:32] 2025-12-03 17:37:33,855 | INFO     | mean x: 1764767105.152985
[2025-12-03 12:38:32] 2025-12-03 17:37:33,855 | INFO     | mean y: 3152874.843283582
[2025-12-03 12:38:32] 2025-12-03 17:37:33,855 | INFO     | intersect: -16913310402.574173
[2025-12-03 12:38:32] 2025-12-03 17:37:33,855 | INFO     | chi2: 3.2158492640967746
[2025-12-03 12:38:32] 2025-12-03 17:37:33,855 | INFO     | current chi2=3.2158492640967746 (change=36.827000149897636 %)
[2025-12-03 12:38:32] 2025-12-03 17:37:33,856 | INFO     | sum of square deviations: 46418694670.98318
[2025-12-03 12:38:32] 2025-12-03 17:37:33,859 | INFO     | sum of deviations: 412399524293.22034
[2025-12-03 12:38:32] 2025-12-03 17:37:33,859 | INFO     | mean x: 1764767257.6723163
[2025-12-03 12:38:32] 2025-12-03 17:37:33,859 | INFO     | mean y: 3158083.593220339
[2025-12-03 12:38:32] 2025-12-03 17:37:33,859 | INFO     | intersect: -15675636477.755424
[2025-12-03 12:38:32] 2025-12-03 17:37:33,859 | INFO     | chi2: 3.137717191226888
[2025-12-03 12:38:32] 2025-12-03 17:37:33,859 | INFO     | current chi2=3.137717191226888 (change=2.4295937543525183 %)
[2025-12-03 12:38:32] 2025-12-03 17:37:33,859 | INFO     | left removable region: 20
[2025-12-03 12:38:32] 2025-12-03 17:37:33,860 | INFO     | sum of square deviations: 41126373833.35124
[2025-12-03 12:38:32] 2025-12-03 17:37:33,862 | INFO     | sum of deviations: 510111500280.43884
[2025-12-03 12:38:32] 2025-12-03 17:37:33,862 | INFO     | mean x: 1764767227.2568626
[2025-12-03 12:38:32] 2025-12-03 17:37:33,862 | INFO     | mean y: 3183703.874509804
[2025-12-03 12:38:32] 2025-12-03 17:37:33,862 | INFO     | intersect: -21886129017.679188
[2025-12-03 12:38:32] 2025-12-03 17:37:33,862 | INFO     | chi2: 0.06009958263789366
[2025-12-03 12:38:32] 2025-12-03 17:37:33,863 | INFO     | current memory leak: 12.40 B/s (using 510 data points, chi2=0.06)
[2025-12-03 12:38:32] 2025-12-03 17:37:33,863 | INFO     | could have reported an average CPU frequency of 3768 MHz (21 samples)
[2025-12-03 12:38:32] 2025-12-03 17:37:33,863 | INFO     | ..............................
[2025-12-03 12:38:32] 2025-12-03 17:37:33,863 | INFO     | . Timing measurements:
[2025-12-03 12:38:32] 2025-12-03 17:37:33,863 | INFO     | . get job = 0 s
[2025-12-03 12:38:32] 2025-12-03 17:37:33,863 | INFO     | . initial setup = 1 s
[2025-12-03 12:38:32] 2025-12-03 17:37:33,863 | INFO     | . payload setup = 7 s
[2025-12-03 12:38:32] 2025-12-03 17:37:33,863 | INFO     | . stage-in = 0 s
[2025-12-03 12:38:32] 2025-12-03 17:37:33,863 | INFO     | . payload execution = 32963 s
[2025-12-03 12:38:32] 2025-12-03 17:37:33,863 | INFO     | . stage-out = 3 s
[2025-12-03 12:38:32] 2025-12-03 17:37:33,863 | INFO     | . log creation = 0 s
[2025-12-03 12:38:32] 2025-12-03 17:37:33,863 | INFO     | ..............................
[2025-12-03 12:38:32] 2025-12-03 17:37:33,910 | INFO     | 
[2025-12-03 12:38:32] 2025-12-03 17:37:33,910 | INFO     | job summary report
[2025-12-03 12:38:32] 2025-12-03 17:37:33,910 | INFO     | --------------------------------------------------
[2025-12-03 12:38:32] 2025-12-03 17:37:33,910 | INFO     | PanDA job id: 6895373263
[2025-12-03 12:38:32] 2025-12-03 17:37:33,910 | INFO     | task id: 47556137
[2025-12-03 12:38:32] 2025-12-03 17:37:33,910 | INFO     | errors: (none)
[2025-12-03 12:38:32] 2025-12-03 17:37:33,910 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 12:38:32] 2025-12-03 17:37:33,910 | INFO     | pilot state: finished 
[2025-12-03 12:38:32] 2025-12-03 17:37:33,910 | INFO     | transexitcode: 0
[2025-12-03 12:38:32] 2025-12-03 17:37:33,910 | INFO     | exeerrorcode: 0
[2025-12-03 12:38:32] 2025-12-03 17:37:33,910 | INFO     | exeerrordiag: 
[2025-12-03 12:38:32] 2025-12-03 17:37:33,910 | INFO     | exitcode: 0
[2025-12-03 12:38:32] 2025-12-03 17:37:33,910 | INFO     | exitmsg: OK
[2025-12-03 12:38:32] 2025-12-03 17:37:33,910 | INFO     | cpuconsumptiontime: 140364 s
[2025-12-03 12:38:32] 2025-12-03 17:37:33,910 | INFO     | nevents: 1000
[2025-12-03 12:38:32] 2025-12-03 17:37:33,910 | INFO     | neventsw: 0
[2025-12-03 12:38:32] 2025-12-03 17:37:33,910 | INFO     | pid: 2244075
[2025-12-03 12:38:32] 2025-12-03 17:37:33,910 | INFO     | pgrp: 2244075
[2025-12-03 12:38:32] 2025-12-03 17:37:33,910 | INFO     | corecount: 10
[2025-12-03 12:38:32] 2025-12-03 17:37:33,910 | INFO     | event service: False
[2025-12-03 12:38:32] 2025-12-03 17:37:33,911 | INFO     | sizes: {0: 2284315, 1: 2284315, 6: 2284605, 11: 2284633, 32972: 2325242, 32976: 2334236, 32979: 2334420, 32990: 2334666}
[2025-12-03 12:38:32] 2025-12-03 17:37:33,911 | INFO     | --------------------------------------------------
[2025-12-03 12:38:32] 2025-12-03 17:37:33,911 | INFO     | 
[2025-12-03 12:38:32] 2025-12-03 17:37:33,911 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-12-03 12:38:32] 2025-12-03 17:37:33,927 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 12:38:32] 2025-12-03 17:37:33,928 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 12:38:32] 2025-12-03 17:37:33,928 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 12:38:32] 2025-12-03 17:37:33,928 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 12:38:32] 2025-12-03 17:37:33,928 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 12:38:32] 2025-12-03 17:37:33,928 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 12:38:32] 2025-12-03 17:37:33,928 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 12:38:32] 2025-12-03 17:37:33,928 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 12:38:32] 2025-12-03 17:37:33,928 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 12:38:32] 2025-12-03 17:37:33,929 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 12:38:32] 2025-12-03 17:37:33,929 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 12:38:32] 2025-12-03 17:37:33,929 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 12:38:32] 2025-12-03 17:37:33,929 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 12:38:32] 2025-12-03 17:37:33,929 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 12:38:32] 2025-12-03 17:37:33,929 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 12:38:32] 2025-12-03 17:37:33,929 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 12:38:32] 2025-12-03 17:37:33,929 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 12:38:32] 2025-12-03 17:37:33,929 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 12:38:32] 2025-12-03 17:37:33,929 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 12:38:32] 2025-12-03 17:37:33,929 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 12:38:32] 2025-12-03 17:37:33,929 | INFO     | job 6895373263 has completed (purged errors)
[2025-12-03 12:38:32] 2025-12-03 17:37:33,929 | INFO     | overall cleanup function is called
[2025-12-03 12:38:32] 2025-12-03 17:37:34,943 | INFO     | --- collectZombieJob: --- 10, [2244075]
[2025-12-03 12:38:32] 2025-12-03 17:37:34,944 | INFO     | zombie collector waiting for pid 2244075
[2025-12-03 12:38:32] 2025-12-03 17:37:34,944 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 12:38:32] 2025-12-03 17:37:34,944 | INFO     | collected zombie processes
[2025-12-03 12:38:32] 2025-12-03 17:37:34,944 | INFO     | will attempt to kill all subprocesses of pid=2244075
[2025-12-03 12:38:32] 2025-12-03 17:37:35,323 | INFO     | process IDs to be killed: [2244075] (in reverse order)
[2025-12-03 12:38:32] 2025-12-03 17:37:35,470 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 12:38:32] 2025-12-03 17:37:35,470 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 12:38:32] 2025-12-03 17:37:35,490 | INFO     | did not find any defunct processes belonging to 2244075
[2025-12-03 12:38:32] 2025-12-03 17:37:35,508 | INFO     | did not find any defunct processes belonging to 2244075
[2025-12-03 12:38:32] 2025-12-03 17:37:35,509 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 12:38:32] 2025-12-03 17:37:35,509 | INFO     | ready for new job
[2025-12-03 12:38:32] 2025-12-03 17:37:35,509 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 12:38:32] 2025-12-03 17:37:35,511 | INFO     | ***************************************
[2025-12-03 12:38:32] 2025-12-03 17:37:35,511 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 12:38:32] 2025-12-03 17:37:35,511 | INFO     | ***************************************
[2025-12-03 12:38:32] 2025-12-03 17:37:35,511 | INFO     | 
[2025-12-03 12:38:32] 2025-12-03 17:37:35,516 | INFO     | architecture information:
[2025-12-03 12:38:32] 2025-12-03 17:37:35,516 | INFO     | executing command: cat /etc/os-release
[2025-12-03 12:38:32] 2025-12-03 17:37:35,533 | INFO     | cat /etc/os-release:
[2025-12-03 12:38:32] NAME="CentOS Linux"
[2025-12-03 12:38:32] VERSION="7 (Core)"
[2025-12-03 12:38:32] ID="centos"
[2025-12-03 12:38:32] ID_LIKE="rhel fedora"
[2025-12-03 12:38:32] VERSION_ID="7"
[2025-12-03 12:38:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 12:38:32] ANSI_COLOR="0;31"
[2025-12-03 12:38:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 12:38:32] HOME_URL="https://www.centos.org/"
[2025-12-03 12:38:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 12:38:32] 
[2025-12-03 12:38:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 12:38:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 12:38:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 12:38:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 12:38:32] 
[2025-12-03 12:38:32] 2025-12-03 17:37:35,533 | INFO     | ***************************************
[2025-12-03 12:38:32] 2025-12-03 17:37:36,037 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-12-03 12:38:32] 2025-12-03 17:37:36,060 | INFO     | sufficient remaining disk space (169396404224 B)
[2025-12-03 12:38:32] 2025-12-03 17:37:36,060 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 12:38:32] 2025-12-03 17:37:36,060 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 12:38:32] 2025-12-03 17:37:36,060 | INFO     | update_server=False
[2025-12-03 12:38:32] 2025-12-03 17:37:36,060 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 12:38:32] 2025-12-03 17:37:36,060 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 12:38:32] 2025-12-03 17:37:36,061 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 12:38:32] 2025-12-03 17:37:36,062 | INFO     | aborting loop
[2025-12-03 12:38:32] 2025-12-03 17:37:36,086 | INFO     | all data control threads have been joined
[2025-12-03 12:38:32] 2025-12-03 17:37:36,140 | INFO     | all payload control threads have been joined
[2025-12-03 12:38:32] 2025-12-03 17:37:37,067 | INFO     | [job] retrieve thread has finished
[2025-12-03 12:38:32] 2025-12-03 17:37:37,068 | INFO     | [job] job monitor thread has finished
[2025-12-03 12:38:32] 2025-12-03 17:37:37,093 | INFO     | [data] control thread has finished
[2025-12-03 12:38:32] 2025-12-03 17:37:37,147 | INFO     | [payload] control thread has finished
[2025-12-03 12:38:32] 2025-12-03 17:37:37,293 | INFO     | [job] validate thread has finished
[2025-12-03 12:38:32] 2025-12-03 17:37:37,320 | INFO     | [payload] failed_post thread has finished
[2025-12-03 12:38:32] 2025-12-03 17:37:37,535 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 12:38:32] 2025-12-03 17:37:37,639 | INFO     | [payload] validate_post thread has finished
[2025-12-03 12:38:32] 2025-12-03 17:37:37,677 | INFO     | all job control threads have been joined
[2025-12-03 12:38:32] 2025-12-03 17:37:37,702 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 12:38:32] 2025-12-03 17:37:37,727 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 12:38:32] 2025-12-03 17:37:37,744 | INFO     | [data] copytool_in thread has finished
[2025-12-03 12:38:32] 2025-12-03 17:37:38,050 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 12:38:32] 2025-12-03 17:37:38,068 | INFO     | [data] copytool_out thread has finished
[2025-12-03 12:38:32] 2025-12-03 17:37:38,684 | INFO     | [job] control thread has finished
[2025-12-03 12:38:32] 2025-12-03 17:37:38,925 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 12:38:32] 2025-12-03 17:37:39,931 | INFO     | [job] queue monitor thread has finished
[2025-12-03 12:38:32] 2025-12-03 17:37:42,057 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 12:38:32] 2025-12-03 17:37:46,712 | INFO     | job.realtimelogging is not enabled
[2025-12-03 12:38:32] 2025-12-03 17:37:47,718 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 12:38:32] 2025-12-03 17:38:07,452 | INFO     | PID=2191789 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-03 12:38:32] 2025-12-03 17:38:07,452 | INFO     | .. there are 22 such processes running
[2025-12-03 12:38:32] 2025-12-03 17:38:07,453 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 12:38:32] 2025-12-03 17:38:07,453 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 12:38:32] 2025-12-03 17:38:07,453 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 12:38:32] 2025-12-03 17:38:25,315 | INFO     | [monitor] cgroup control has ended
[2025-12-03 12:38:32] 2025-12-03 17:38:26,489 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139749184431936)>', '<ExcThread(monitor, started 139748555347712)>']
[2025-12-03 12:38:32] 2025-12-03 17:38:26,570 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 12:38:32] 2025-12-03 17:38:26,571 | INFO     | [monitor] control thread has ended
[2025-12-03 12:38:32] 2025-12-03 17:38:31,515 | INFO     | all workflow threads have been joined
[2025-12-03 12:38:32] 2025-12-03 17:38:31,516 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 12:38:32] 2025-12-03 17:38:31,516 | INFO     | traces error code: 0
[2025-12-03 12:38:32] 2025-12-03 17:38:31,516 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 12:38:32] 2025-12-03 17:38:31,712 [wrapper] ==== pilot stdout END ====
[2025-12-03 12:38:32] 2025-12-03 17:38:31,717 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 12:38:32] 2025-12-03 17:38:31,719 [wrapper] pilotpid: 2191789
[2025-12-03 12:38:32] 2025-12-03 17:38:31,722 [wrapper] Pilot exit status: 0
[2025-12-03 12:38:32] 2025-12-03 17:38:31,748 [wrapper] pandaids: 6895373263 6895373263 6895373263
[2025-12-03 12:38:32] 2025-12-03 17:38:31,859 [wrapper] cleanup supervisor_pilot  693848 2191790
[2025-12-03 12:38:32] 2025-12-03 17:38:31,906 [wrapper] Test setup, not cleaning
[2025-12-03 12:38:32] 2025-12-03 17:38:31,918 [wrapper] apfmon messages muted
[2025-12-03 12:38:32] 2025-12-03 17:38:31,926 [wrapper] ==== wrapper stdout END ====
[2025-12-03 12:38:32] 2025-12-03 17:38:31,958 [wrapper] ==== wrapper stderr END ====
[2025-12-03 12:38:32]  *** Error codes and diagnostics ***
[2025-12-03 12:38:32]     "exeErrorCode": 0,
[2025-12-03 12:38:32]     "exeErrorDiag": "",
[2025-12-03 12:38:32]     "pilotErrorCode": 0,
[2025-12-03 12:38:32]     "pilotErrorDiag": "",
[2025-12-03 12:38:32]  *** Listing of results directory ***
[2025-12-03 12:38:32] total 1706744
[2025-12-03 12:38:32] drwx------. 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-12-03 12:38:32] -rwx------. 1 boincer umatlas     36292 Nov 23 17:35 runpilot2-wrapper.sh
[2025-12-03 12:38:32] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 17:35 queuedata.json
[2025-12-03 12:38:32] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 17:35 pilot3.tar.gz
[2025-12-03 12:38:32] -rw-r--r--. 1 boincer umatlas       100 Dec  2 21:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 12:38:32] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  2 21:48 run_atlas
[2025-12-03 12:38:32] -rw-r--r--. 1 boincer umatlas       105 Dec  2 21:48 job.xml
[2025-12-03 12:38:32] -rw-r--r--. 3 boincer umatlas 406689523 Dec  2 21:48 EVNT.47483658._000924.pool.root.1
[2025-12-03 12:38:32] -rw-r--r--. 3 boincer umatlas 406689523 Dec  2 21:48 ATLAS.root_0
[2025-12-03 12:38:32] drwxrwx--x. 2 boincer umatlas      4096 Dec  2 21:48 shared
[2025-12-03 12:38:32] -rw-r--r--. 2 boincer umatlas    590094 Dec  2 21:48 input.tar.gz
[2025-12-03 12:38:32] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 21:48 start_atlas.sh
[2025-12-03 12:38:32] -rw-r--r--. 1 boincer umatlas         0 Dec  2 21:48 boinc_lockfile
[2025-12-03 12:38:32] -rw-r--r--. 1 boincer umatlas      2786 Dec  3 03:27 pandaJob.out
[2025-12-03 12:38:32] -rw-------. 1 boincer umatlas        57 Dec  3 03:27 setup.sh.local
[2025-12-03 12:38:32] -rw-------. 1 boincer umatlas    985766 Dec  3 03:27 agis_schedconf.cvmfs.json
[2025-12-03 12:38:32] -rw-r--r--. 1 boincer umatlas       533 Dec  3 12:30 boinc_task_state.xml
[2025-12-03 12:38:32] -rw-------. 1 boincer umatlas 917840529 Dec  3 12:36 HITS.47556137._009106.pool.root.1
[2025-12-03 12:38:32] -rw-r--r--. 1 boincer umatlas      7176 Dec  3 12:37 init_data.xml
[2025-12-03 12:38:32] -rw-------. 1 boincer umatlas      1074 Dec  3 12:37 memory_monitor_summary.json
[2025-12-03 12:38:32] -rw-------. 1 boincer umatlas   1516240 Dec  3 12:37 agis_ddmendpoints.agis.ALL.json
[2025-12-03 12:38:32] -rw-------. 1 boincer umatlas   2012862 Dec  3 12:37 log.47556137._009106.job.log.tgz.1
[2025-12-03 12:38:32] -rw-------. 1 boincer umatlas      8639 Dec  3 12:37 heartbeat.json
[2025-12-03 12:38:32] -rw-------. 1 boincer umatlas        97 Dec  3 12:38 pilot_heartbeat.json
[2025-12-03 12:38:32] -rw-r--r--. 1 boincer umatlas        29 Dec  3 12:38 wrapper_checkpoint.txt
[2025-12-03 12:38:32] -rw-r--r--. 1 boincer umatlas      8192 Dec  3 12:38 boinc_mmap_file
[2025-12-03 12:38:32] -rw-------. 1 boincer umatlas      4897 Dec  3 12:38 pilotlog.txt
[2025-12-03 12:38:32] -rw-------. 1 boincer umatlas   4266543 Dec  3 12:38 log.47556137._009106.job.log.1
[2025-12-03 12:38:32] -rw-------. 1 boincer umatlas       353 Dec  3 12:38 output.list
[2025-12-03 12:38:32] -rw-r--r--. 1 boincer umatlas       620 Dec  3 12:38 runtime_log
[2025-12-03 12:38:32] -rw-------. 1 boincer umatlas   6297600 Dec  3 12:38 result.tar.gz
[2025-12-03 12:38:32] -rw-r--r--. 1 boincer umatlas      9430 Dec  3 12:38 runtime_log.err
[2025-12-03 12:38:32] -rw-------. 1 boincer umatlas       916 Dec  3 12:38 roXNDmSrXh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUFLKDmGUXwVo.diag
[2025-12-03 12:38:32] -rw-r--r--. 1 boincer umatlas     25890 Dec  3 12:38 stderr.txt
[2025-12-03 12:38:32] HITS file was successfully produced:
[2025-12-03 12:38:32] -rw-------. 1 boincer umatlas 917840529 Dec  3 12:36 shared/HITS.pool.root.1
[2025-12-03 12:38:32]  *** Contents of shared directory: ***
[2025-12-03 12:38:32] total 1300248
[2025-12-03 12:38:32] -rw-r--r--. 3 boincer umatlas 406689523 Dec  2 21:48 ATLAS.root_0
[2025-12-03 12:38:32] -rw-r--r--. 2 boincer umatlas    590094 Dec  2 21:48 input.tar.gz
[2025-12-03 12:38:32] -rw-r--r--. 2 boincer umatlas     15847 Dec  2 21:48 start_atlas.sh
[2025-12-03 12:38:32] -rw-------. 1 boincer umatlas 917840529 Dec  3 12:36 HITS.pool.root.1
[2025-12-03 12:38:32] -rw-------. 1 boincer umatlas   6297600 Dec  3 12:38 result.tar.gz
12:38:33 (2172574): run_atlas exited; CPU time 140554.823969
12:38:33 (2172574): called boinc_finish(0)

</stderr_txt>
]]>

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