Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
08:52:45 (306572): wrapper (7.7.26015): starting
08:52:45 (306572): wrapper: running run_atlas (--nthreads 10)
[2025-12-06 08:52:45] Arguments: --nthreads 10
[2025-12-06 08:52:45] Threads: 10
[2025-12-06 08:52:45] Checking for CVMFS
[2025-12-06 08:52:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-06 08:52:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-06 08:52:46] Running cvmfs_config stat atlas.cern.ch
[2025-12-06 08:52:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-06 08:52:46] 2.13.3.0 11319 108 67020 153696 3 273 3690615 4096000 12409 130560 0 8448421 100.000 5401 1046 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-12-06 08:52:46] CVMFS is ok
[2025-12-06 08:52:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-06 08:52:46] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-06 08:52:46] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-06 08:52:46] Further information can be found at the LHC@home message board.
[2025-12-06 08:52:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-06 08:52:46] Checking for apptainer binary...
[2025-12-06 08:52:46] apptainer is not installed, using version from CVMFS
[2025-12-06 08:52:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-06 08:52:46] 7950x-linux
[2025-12-06 08:52:46] apptainer works
[2025-12-06 08:52:46] Set ATHENA_PROC_NUMBER=10
[2025-12-06 08:52:46] Set ATHENA_CORE_NUMBER=10
[2025-12-06 08:52:46] Starting ATLAS job with PandaID=6895355929
[2025-12-06 08:52:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc534/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-07 01:28:55]  *** The last 200 lines of the pilot log: ***
[2025-12-07 01:28:55] 2025-12-07 09:28:21,793 | INFO     | time since job start (59721s) is within the limit (172800.0s)
[2025-12-07 01:28:55] 2025-12-07 09:28:22,230 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-07 01:28:55] 2025-12-07 09:28:22,232 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4000.0011250000007
[2025-12-07 01:28:55] 2025-12-07 09:28:22,236 | INFO     | using path: /var/lib/multiboinc/boinc534/slots/2/PanDA_Pilot-6895355929/memory_monitor_summary.json (trf name=prmon)
[2025-12-07 01:28:55] 2025-12-07 09:28:22,236 | INFO     | extracted standard info from prmon json
[2025-12-07 01:28:55] 2025-12-07 09:28:22,236 | INFO     | extracted standard memory fields from prmon json
[2025-12-07 01:28:55] 2025-12-07 09:28:22,236 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-07 01:28:55] 2025-12-07 09:28:22,244 | INFO     | fitting pss+swap vs Time
[2025-12-07 01:28:55] 2025-12-07 09:28:22,244 | INFO     | sum of square deviations: 290955148330.0
[2025-12-07 01:28:55] 2025-12-07 09:28:22,255 | INFO     | sum of deviations: 2141822382069.0007
[2025-12-07 01:28:55] 2025-12-07 09:28:22,255 | INFO     | mean x: 1765069838.0
[2025-12-07 01:28:55] 2025-12-07 09:28:22,255 | INFO     | mean y: 3158219.215526047
[2025-12-07 01:28:55] 2025-12-07 09:28:22,255 | INFO     | intersect: -12990136818.325853
[2025-12-07 01:28:55] 2025-12-07 09:28:22,255 | INFO     | chi2: 4.578579607502323
[2025-12-07 01:28:55] 2025-12-07 09:28:22,256 | INFO     | sum of square deviations: 286519930287.5
[2025-12-07 01:28:55] 2025-12-07 09:28:22,267 | INFO     | sum of deviations: 2427958612688.0
[2025-12-07 01:28:55] 2025-12-07 09:28:22,267 | INFO     | mean x: 1765069685.5
[2025-12-07 01:28:55] 2025-12-07 09:28:22,267 | INFO     | mean y: 3168049.0184804928
[2025-12-07 01:28:55] 2025-12-07 09:28:22,267 | INFO     | intersect: -14953962998.040094
[2025-12-07 01:28:55] 2025-12-07 09:28:22,267 | INFO     | chi2: 2.3306260807951475
[2025-12-07 01:28:55] 2025-12-07 09:28:22,267 | INFO     | current chi2=2.3306260807951475 (change=49.09718120929352 %)
[2025-12-07 01:28:55] 2025-12-07 09:28:22,268 | INFO     | sum of square deviations: 282130015420.0
[2025-12-07 01:28:55] 2025-12-07 09:28:22,278 | INFO     | sum of deviations: 2434596080942.998
[2025-12-07 01:28:55] 2025-12-07 09:28:22,278 | INFO     | mean x: 1765069533.0
[2025-12-07 01:28:55] 2025-12-07 09:28:22,278 | INFO     | mean y: 3168275.8080495354
[2025-12-07 01:28:55] 2025-12-07 09:28:22,278 | INFO     | intersect: -15228218435.161024
[2025-12-07 01:28:55] 2025-12-07 09:28:22,279 | INFO     | chi2: 2.258869732349926
[2025-12-07 01:28:55] 2025-12-07 09:28:22,279 | INFO     | current chi2=2.258869732349926 (change=3.0788443086820845 %)
[2025-12-07 01:28:55] 2025-12-07 09:28:22,279 | INFO     | right removable region: 968
[2025-12-07 01:28:55] 2025-12-07 09:28:22,279 | INFO     | sum of square deviations: 286519930287.5
[2025-12-07 01:28:55] 2025-12-07 09:28:22,292 | INFO     | sum of deviations: 1878726546941.5
[2025-12-07 01:28:55] 2025-12-07 09:28:22,292 | INFO     | mean x: 1765069990.5
[2025-12-07 01:28:55] 2025-12-07 09:28:22,292 | INFO     | mean y: 3167251.6704312116
[2025-12-07 01:28:55] 2025-12-07 09:28:22,292 | INFO     | intersect: -11570491324.313112
[2025-12-07 01:28:55] 2025-12-07 09:28:22,293 | INFO     | chi2: 2.6748063328738856
[2025-12-07 01:28:55] 2025-12-07 09:28:22,293 | INFO     | current chi2=2.6748063328738856 (change=41.57999724431943 %)
[2025-12-07 01:28:55] 2025-12-07 09:28:22,294 | INFO     | sum of square deviations: 282130015420.0
[2025-12-07 01:28:55] 2025-12-07 09:28:22,304 | INFO     | sum of deviations: 1787758549627.0
[2025-12-07 01:28:55] 2025-12-07 09:28:22,304 | INFO     | mean x: 1765070143.0
[2025-12-07 01:28:55] 2025-12-07 09:28:22,304 | INFO     | mean y: 3170411.2270381837
[2025-12-07 01:28:55] 2025-12-07 09:28:22,304 | INFO     | intersect: -11181457477.946886
[2025-12-07 01:28:55] 2025-12-07 09:28:22,304 | INFO     | chi2: 2.5807407593212073
[2025-12-07 01:28:55] 2025-12-07 09:28:22,304 | INFO     | current chi2=2.5807407593212073 (change=3.51672464643867 %)
[2025-12-07 01:28:55] 2025-12-07 09:28:22,305 | INFO     | left removable region: 20
[2025-12-07 01:28:55] 2025-12-07 09:28:22,306 | INFO     | sum of square deviations: 264181835177.0
[2025-12-07 01:28:55] 2025-12-07 09:28:22,320 | INFO     | sum of deviations: 1940114075000.5
[2025-12-07 01:28:55] 2025-12-07 09:28:22,320 | INFO     | mean x: 1765070112.5
[2025-12-07 01:28:55] 2025-12-07 09:28:22,320 | INFO     | mean y: 3185458.1592827006
[2025-12-07 01:28:55] 2025-12-07 09:28:22,320 | INFO     | intersect: -12959240086.086092
[2025-12-07 01:28:55] 2025-12-07 09:28:22,321 | INFO     | chi2: 0.1808128825405686
[2025-12-07 01:28:55] 2025-12-07 09:28:22,321 | INFO     | current memory leak: 7.34 B/s (using 948 data points, chi2=0.18)
[2025-12-07 01:28:55] 2025-12-07 09:28:22,321 | INFO     | could have reported an average CPU frequency of 3999 MHz (36 samples)
[2025-12-07 01:28:55] 2025-12-07 09:28:22,321 | INFO     | ..............................
[2025-12-07 01:28:55] 2025-12-07 09:28:22,322 | INFO     | . Timing measurements:
[2025-12-07 01:28:55] 2025-12-07 09:28:22,322 | INFO     | . get job = 0 s
[2025-12-07 01:28:55] 2025-12-07 09:28:22,322 | INFO     | . initial setup = 3 s
[2025-12-07 01:28:55] 2025-12-07 09:28:22,322 | INFO     | . payload setup = 6 s
[2025-12-07 01:28:55] 2025-12-07 09:28:22,322 | INFO     | . stage-in = 0 s
[2025-12-07 01:28:55] 2025-12-07 09:28:22,322 | INFO     | . payload execution = 59684 s
[2025-12-07 01:28:55] 2025-12-07 09:28:22,322 | INFO     | . stage-out = 4 s
[2025-12-07 01:28:55] 2025-12-07 09:28:22,322 | INFO     | . log creation = 0 s
[2025-12-07 01:28:55] 2025-12-07 09:28:22,322 | INFO     | ..............................
[2025-12-07 01:28:55] 2025-12-07 09:28:22,379 | INFO     | 
[2025-12-07 01:28:55] 2025-12-07 09:28:22,379 | INFO     | job summary report
[2025-12-07 01:28:55] 2025-12-07 09:28:22,379 | INFO     | --------------------------------------------------
[2025-12-07 01:28:55] 2025-12-07 09:28:22,379 | INFO     | PanDA job id: 6895355929
[2025-12-07 01:28:55] 2025-12-07 09:28:22,379 | INFO     | task id: 47556149
[2025-12-07 01:28:55] 2025-12-07 09:28:22,379 | INFO     | errors: (none)
[2025-12-07 01:28:55] 2025-12-07 09:28:22,379 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-07 01:28:55] 2025-12-07 09:28:22,379 | INFO     | pilot state: finished 
[2025-12-07 01:28:55] 2025-12-07 09:28:22,379 | INFO     | transexitcode: 0
[2025-12-07 01:28:55] 2025-12-07 09:28:22,379 | INFO     | exeerrorcode: 0
[2025-12-07 01:28:55] 2025-12-07 09:28:22,379 | INFO     | exeerrordiag: 
[2025-12-07 01:28:55] 2025-12-07 09:28:22,379 | INFO     | exitcode: 0
[2025-12-07 01:28:55] 2025-12-07 09:28:22,379 | INFO     | exitmsg: OK
[2025-12-07 01:28:55] 2025-12-07 09:28:22,379 | INFO     | cpuconsumptiontime: 137204 s
[2025-12-07 01:28:55] 2025-12-07 09:28:22,379 | INFO     | nevents: 1000
[2025-12-07 01:28:55] 2025-12-07 09:28:22,379 | INFO     | neventsw: 0
[2025-12-07 01:28:55] 2025-12-07 09:28:22,379 | INFO     | pid: 317097
[2025-12-07 01:28:55] 2025-12-07 09:28:22,379 | INFO     | pgrp: 317097
[2025-12-07 01:28:55] 2025-12-07 09:28:22,379 | INFO     | corecount: 10
[2025-12-07 01:28:55] 2025-12-07 09:28:22,379 | INFO     | event service: False
[2025-12-07 01:28:55] 2025-12-07 09:28:22,379 | INFO     | sizes: {0: 2284227, 6: 2284489, 11: 2284517, 59694: 2336892, 59700: 2345970, 59706: 2346160}
[2025-12-07 01:28:55] 2025-12-07 09:28:22,380 | INFO     | --------------------------------------------------
[2025-12-07 01:28:55] 2025-12-07 09:28:22,380 | INFO     | 
[2025-12-07 01:28:55] 2025-12-07 09:28:22,380 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc534/slots/2
[2025-12-07 01:28:55] 2025-12-07 09:28:22,399 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-07 01:28:55] 2025-12-07 09:28:22,399 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-07 01:28:55] 2025-12-07 09:28:22,400 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-07 01:28:55] 2025-12-07 09:28:22,400 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-07 01:28:55] 2025-12-07 09:28:22,400 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-07 01:28:55] 2025-12-07 09:28:22,400 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-07 01:28:55] 2025-12-07 09:28:22,400 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-07 01:28:55] 2025-12-07 09:28:22,400 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-07 01:28:55] 2025-12-07 09:28:22,400 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-07 01:28:55] 2025-12-07 09:28:22,400 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-07 01:28:55] 2025-12-07 09:28:22,400 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-07 01:28:55] 2025-12-07 09:28:22,400 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-07 01:28:55] 2025-12-07 09:28:22,400 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-07 01:28:55] 2025-12-07 09:28:22,400 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-07 01:28:55] 2025-12-07 09:28:22,400 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-07 01:28:55] 2025-12-07 09:28:22,400 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-07 01:28:55] 2025-12-07 09:28:22,400 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-07 01:28:55] 2025-12-07 09:28:22,400 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-07 01:28:55] 2025-12-07 09:28:22,400 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-07 01:28:55] 2025-12-07 09:28:22,400 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-07 01:28:55] 2025-12-07 09:28:22,400 | INFO     | job 6895355929 has completed (purged errors)
[2025-12-07 01:28:55] 2025-12-07 09:28:22,400 | INFO     | overall cleanup function is called
[2025-12-07 01:28:55] 2025-12-07 09:28:23,414 | INFO     | --- collectZombieJob: --- 10, [317097]
[2025-12-07 01:28:55] 2025-12-07 09:28:23,414 | INFO     | zombie collector waiting for pid 317097
[2025-12-07 01:28:55] 2025-12-07 09:28:23,414 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-07 01:28:55] 2025-12-07 09:28:23,414 | INFO     | collected zombie processes
[2025-12-07 01:28:55] 2025-12-07 09:28:23,414 | INFO     | will attempt to kill all subprocesses of pid=317097
[2025-12-07 01:28:55] 2025-12-07 09:28:23,725 | INFO     | process IDs to be killed: [317097] (in reverse order)
[2025-12-07 01:28:55] 2025-12-07 09:28:23,878 | WARNING  | found no corresponding commands to process id(s)
[2025-12-07 01:28:55] 2025-12-07 09:28:23,878 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-07 01:28:55] 2025-12-07 09:28:23,884 | INFO     | did not find any defunct processes belonging to 317097
[2025-12-07 01:28:55] 2025-12-07 09:28:23,889 | INFO     | did not find any defunct processes belonging to 317097
[2025-12-07 01:28:55] 2025-12-07 09:28:23,889 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-07 01:28:55] 2025-12-07 09:28:23,889 | INFO     | ready for new job
[2025-12-07 01:28:55] 2025-12-07 09:28:23,889 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-07 01:28:55] 2025-12-07 09:28:23,894 | INFO     | ***************************************
[2025-12-07 01:28:55] 2025-12-07 09:28:23,894 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-07 01:28:55] 2025-12-07 09:28:23,894 | INFO     | ***************************************
[2025-12-07 01:28:55] 2025-12-07 09:28:23,894 | INFO     | 
[2025-12-07 01:28:55] 2025-12-07 09:28:23,896 | INFO     | architecture information:
[2025-12-07 01:28:55] 2025-12-07 09:28:23,896 | INFO     | executing command: cat /etc/os-release
[2025-12-07 01:28:55] 2025-12-07 09:28:23,929 | INFO     | cat /etc/os-release:
[2025-12-07 01:28:55] NAME="CentOS Linux"
[2025-12-07 01:28:55] VERSION="7 (Core)"
[2025-12-07 01:28:55] ID="centos"
[2025-12-07 01:28:55] ID_LIKE="rhel fedora"
[2025-12-07 01:28:55] VERSION_ID="7"
[2025-12-07 01:28:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-07 01:28:55] ANSI_COLOR="0;31"
[2025-12-07 01:28:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-07 01:28:55] HOME_URL="https://www.centos.org/"
[2025-12-07 01:28:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-07 01:28:55] 
[2025-12-07 01:28:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-07 01:28:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-07 01:28:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-07 01:28:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-07 01:28:55] 
[2025-12-07 01:28:55] 2025-12-07 09:28:23,930 | INFO     | ***************************************
[2025-12-07 01:28:55] 2025-12-07 09:28:24,432 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc534/slots/2
[2025-12-07 01:28:55] 2025-12-07 09:28:24,474 | INFO     | sufficient remaining disk space (178611290112 B)
[2025-12-07 01:28:55] 2025-12-07 09:28:24,474 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-07 01:28:55] 2025-12-07 09:28:24,474 | INFO     | current server update state: UPDATING_FINAL
[2025-12-07 01:28:55] 2025-12-07 09:28:24,474 | INFO     | update_server=False
[2025-12-07 01:28:55] 2025-12-07 09:28:24,474 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-07 01:28:55] 2025-12-07 09:28:24,474 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-07 01:28:55] 2025-12-07 09:28:24,837 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-07 01:28:55] 2025-12-07 09:28:24,837 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-07 01:28:55] 2025-12-07 09:28:24,837 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-07 01:28:55] 2025-12-07 09:28:24,837 | INFO     | will abort loop
[2025-12-07 01:28:55] 2025-12-07 09:28:24,876 | INFO     | all payload control threads have been joined
[2025-12-07 01:28:55] 2025-12-07 09:28:25,299 | INFO     | all data control threads have been joined
[2025-12-07 01:28:55] 2025-12-07 09:28:25,479 | INFO     | [job] retrieve thread has finished
[2025-12-07 01:28:55] 2025-12-07 09:28:25,709 | INFO     | all job control threads have been joined
[2025-12-07 01:28:55] 2025-12-07 09:28:25,842 | INFO     | [job] job monitor thread has finished
[2025-12-07 01:28:55] 2025-12-07 09:28:25,881 | INFO     | [payload] control thread has finished
[2025-12-07 01:28:55] 2025-12-07 09:28:26,202 | INFO     | [job] create_data_payload thread has finished
[2025-12-07 01:28:55] 2025-12-07 09:28:26,283 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-07 01:28:55] 2025-12-07 09:28:26,300 | INFO     | [payload] validate_pre thread has finished
[2025-12-07 01:28:55] 2025-12-07 09:28:26,304 | INFO     | [data] control thread has finished
[2025-12-07 01:28:55] 2025-12-07 09:28:26,374 | INFO     | [job] validate thread has finished
[2025-12-07 01:28:55] 2025-12-07 09:28:26,403 | INFO     | [payload] validate_post thread has finished
[2025-12-07 01:28:55] 2025-12-07 09:28:26,479 | INFO     | [data] copytool_out thread has finished
[2025-12-07 01:28:55] 2025-12-07 09:28:26,629 | INFO     | [data] copytool_in thread has finished
[2025-12-07 01:28:55] 2025-12-07 09:28:26,714 | INFO     | [job] control thread has finished
[2025-12-07 01:28:55] 2025-12-07 09:28:26,961 | INFO     | [payload] execute_payloads thread has finished
[2025-12-07 01:28:55] 2025-12-07 09:28:27,070 | INFO     | [payload] failed_post thread has finished
[2025-12-07 01:28:55] 2025-12-07 09:28:27,389 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-07 01:28:55] 2025-12-07 09:28:27,497 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-07 01:28:55] 2025-12-07 09:28:28,395 | INFO     | [job] queue monitor thread has finished
[2025-12-07 01:28:55] 2025-12-07 09:28:31,502 | INFO     | [data] queue_monitor thread has finished
[2025-12-07 01:28:55] 2025-12-07 09:28:39,434 | INFO     | [monitor] cgroup control has ended
[2025-12-07 01:28:55] 2025-12-07 09:28:40,579 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136288866555712)>', '<ExcThread(monitor, started 136288585877248)>']
[2025-12-07 01:28:55] 2025-12-07 09:28:45,604 | INFO     | all workflow threads have been joined
[2025-12-07 01:28:55] 2025-12-07 09:28:45,604 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-07 01:28:55] 2025-12-07 09:28:45,604 | INFO     | traces error code: 0
[2025-12-07 01:28:55] 2025-12-07 09:28:45,604 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-07 01:28:55] 2025-12-07 09:28:55,173 | INFO     | PID=310413 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-07 01:28:55] 2025-12-07 09:28:55,173 | INFO     | .. there are 14 such processes running
[2025-12-07 01:28:55] 2025-12-07 09:28:55,173 | INFO     | found 0 job(s) in 20 queues
[2025-12-07 01:28:55] 2025-12-07 09:28:55,173 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-07 01:28:55] 2025-12-07 09:28:55,173 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-07 01:28:55] 2025-12-07 09:28:55,173 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-07 01:28:55] 2025-12-07 09:28:55,173 | INFO     | [monitor] control thread has ended
[2025-12-07 01:28:55] 2025-12-07 09:28:55,278 [wrapper] ==== pilot stdout END ====
[2025-12-07 01:28:55] 2025-12-07 09:28:55,284 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-07 01:28:55] 2025-12-07 09:28:55,286 [wrapper] pilotpid: 310413
[2025-12-07 01:28:55] 2025-12-07 09:28:55,288 [wrapper] Pilot exit status: 0
[2025-12-07 01:28:55] 2025-12-07 09:28:55,300 [wrapper] pandaids: 6895355929
[2025-12-07 01:28:55] 2025-12-07 09:28:55,366 [wrapper] cleanup supervisor_pilot 1663986 310414
[2025-12-07 01:28:55] 2025-12-07 09:28:55,371 [wrapper] Test setup, not cleaning
[2025-12-07 01:28:55] 2025-12-07 09:28:55,373 [wrapper] apfmon messages muted
[2025-12-07 01:28:55] 2025-12-07 09:28:55,375 [wrapper] ==== wrapper stdout END ====
[2025-12-07 01:28:55] 2025-12-07 09:28:55,377 [wrapper] ==== wrapper stderr END ====
[2025-12-07 01:28:55]  *** Error codes and diagnostics ***
[2025-12-07 01:28:55]     "exeErrorCode": 0,
[2025-12-07 01:28:55]     "exeErrorDiag": "",
[2025-12-07 01:28:55]     "pilotErrorCode": 0,
[2025-12-07 01:28:55]     "pilotErrorDiag": "",
[2025-12-07 01:28:55]  *** Listing of results directory ***
[2025-12-07 01:28:55] total 1322912
[2025-12-07 01:28:55] -rw-r--r-- 1 root root      5112 Nov 23 01:19 queuedata.json
[2025-12-07 01:28:55] -rw-r--r-- 1 root root    576529 Nov 23 01:19 pilot3.tar.gz
[2025-12-07 01:28:55] -rwx------ 1 4871 1028     36292 Nov 23 01:19 runpilot2-wrapper.sh
[2025-12-07 01:28:55] -rw-r--r-- 1 root root       100 Dec  6 08:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-07 01:28:55] -rwxr-xr-x 1 root root      7986 Dec  6 08:52 run_atlas
[2025-12-07 01:28:55] -rw-r--r-- 1 root root       105 Dec  6 08:52 job.xml
[2025-12-07 01:28:55] -rw-r--r-- 2 root root 411584556 Dec  6 08:52 EVNT.47483658._001151.pool.root.1
[2025-12-07 01:28:55] -rw-r--r-- 2 root root     15847 Dec  6 08:52 start_atlas.sh
[2025-12-07 01:28:55] drwxrwx--x 2 root root      4096 Dec  6 08:52 shared
[2025-12-07 01:28:55] -rw-r--r-- 2 root root    590101 Dec  6 08:52 input.tar.gz
[2025-12-07 01:28:55] -rw-r--r-- 1 root root         0 Dec  6 08:52 boinc_lockfile
[2025-12-07 01:28:55] -rw-r--r-- 1 root root      2784 Dec  6 08:52 pandaJob.out
[2025-12-07 01:28:55] -rw------- 1 root root    985902 Dec  6 08:52 agis_schedconf.cvmfs.json
[2025-12-07 01:28:55] drwxr-xr-x 5  320  320      4096 Dec  6 08:53 pilot3
[2025-12-07 01:28:55] -rw-r--r-- 1 root root      9524 Dec  6 20:25 init_data.xml
[2025-12-07 01:28:55] -rw-r--r-- 1 root root       533 Dec  7 01:21 boinc_task_state.xml
[2025-12-07 01:28:55] -rw------- 1 root root 917490757 Dec  7 01:27 HITS.47556149._001374.pool.root.1
[2025-12-07 01:28:55] -rw------- 1 root root      1052 Dec  7 01:28 memory_monitor_summary.json
[2025-12-07 01:28:55] -rw------- 1 root root        95 Dec  7 01:28 pilot_heartbeat.json
[2025-12-07 01:28:55] -rw------- 1 root root   1516240 Dec  7 01:28 agis_ddmendpoints.agis.ALL.json
[2025-12-07 01:28:55] -rw------- 1 root root   2347132 Dec  7 01:28 log.47556149._001374.job.log.tgz.1
[2025-12-07 01:28:55] -rw------- 1 root root      8610 Dec  7 01:28 heartbeat.json
[2025-12-07 01:28:55] -rw-r--r-- 1 root root      8192 Dec  7 01:28 boinc_mmap_file
[2025-12-07 01:28:55] -rw-r--r-- 1 root root        29 Dec  7 01:28 wrapper_checkpoint.txt
[2025-12-07 01:28:55] -rw------- 1 root root       822 Dec  7 01:28 pilotlog.txt
[2025-12-07 01:28:55] -rw------- 1 root root   8492276 Dec  7 01:28 log.47556149._001374.job.log.1
[2025-12-07 01:28:55] -rw------- 1 root root       353 Dec  7 01:28 output.list
[2025-12-07 01:28:55] -rw-r--r-- 1 root root       620 Dec  7 01:28 runtime_log
[2025-12-07 01:28:55] -rw------- 1 root root  10854400 Dec  7 01:28 result.tar.gz
[2025-12-07 01:28:55] -rw------- 1 root root       663 Dec  7 01:28 W0NNDmDRLh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqUIKDmI5RQZn.diag
[2025-12-07 01:28:55] -rw-r--r-- 1 root root      9021 Dec  7 01:28 runtime_log.err
[2025-12-07 01:28:55] -rw-r--r-- 1 root root     21349 Dec  7 01:28 stderr.txt
[2025-12-07 01:28:55] HITS file was successfully produced:
[2025-12-07 01:28:55] -rw------- 1 root root 917490757 Dec  7 01:27 shared/HITS.pool.root.1
[2025-12-07 01:28:55]  *** Contents of shared directory: ***
[2025-12-07 01:28:55] total 1309132
[2025-12-07 01:28:55] -rw-r--r-- 2 root root 411584556 Dec  6 08:52 ATLAS.root_0
[2025-12-07 01:28:55] -rw-r--r-- 2 root root     15847 Dec  6 08:52 start_atlas.sh
[2025-12-07 01:28:55] -rw-r--r-- 2 root root    590101 Dec  6 08:52 input.tar.gz
[2025-12-07 01:28:55] -rw------- 1 root root 917490757 Dec  7 01:27 HITS.pool.root.1
[2025-12-07 01:28:55] -rw------- 1 root root  10854400 Dec  7 01:28 result.tar.gz
01:28:57 (306572): run_atlas exited; CPU time 137564.666319
01:28:57 (306572): called boinc_finish(0)

</stderr_txt>
]]>

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