Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
01:25:51 (1666618): wrapper (7.7.26015): starting
01:25:51 (1666618): wrapper: running run_atlas (--nthreads 10)
[2025-12-07 01:25:51] Arguments: --nthreads 10
[2025-12-07 01:25:51] Threads: 10
[2025-12-07 01:25:51] Checking for CVMFS
[2025-12-07 01:25:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-07 01:25:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-07 01:25:52] Running cvmfs_config stat atlas.cern.ch
[2025-12-07 01:25:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-07 01:25:52] 2.13.3.0 11319 1101 65884 153722 3 110 3919967 4096000 12507 130560 0 150135602 100.000 38561 633 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-12-07 01:25:52] CVMFS is ok
[2025-12-07 01:25:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-07 01:25:52] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-07 01:25:52] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-07 01:25:52] Further information can be found at the LHC@home message board.
[2025-12-07 01:25:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-07 01:25:52] Checking for apptainer binary...
[2025-12-07 01:25:52] apptainer is not installed, using version from CVMFS
[2025-12-07 01:25:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-07 01:25:52] 7950x-linux
[2025-12-07 01:25:52] apptainer works
[2025-12-07 01:25:52] Set ATHENA_PROC_NUMBER=10
[2025-12-07 01:25:52] Set ATHENA_CORE_NUMBER=10
[2025-12-07 01:25:52] Starting ATLAS job with PandaID=6893854786
[2025-12-07 01:25:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc534/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-07 18:38:55]  *** The last 200 lines of the pilot log: ***
[2025-12-07 18:38:55] 2025-12-08 02:37:59,177 | INFO     | monitor loop #4481: job 0:6893854786 is in state 'finished'
[2025-12-07 18:38:55] 2025-12-08 02:37:59,177 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-07 18:38:55] 2025-12-08 02:37:59,255 | INFO     | time since job start (61913s) is within the limit (172800.0s)
[2025-12-07 18:38:55] 2025-12-08 02:38:00,540 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-07 18:38:55] 2025-12-08 02:38:00,546 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3999.9947812499995
[2025-12-07 18:38:55] 2025-12-08 02:38:00,557 | INFO     | using path: /var/lib/multiboinc/boinc534/slots/0/PanDA_Pilot-6893854786/memory_monitor_summary.json (trf name=prmon)
[2025-12-07 18:38:55] 2025-12-08 02:38:00,557 | INFO     | extracted standard info from prmon json
[2025-12-07 18:38:55] 2025-12-08 02:38:00,558 | INFO     | extracted standard memory fields from prmon json
[2025-12-07 18:38:55] 2025-12-08 02:38:00,558 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-07 18:38:55] 2025-12-08 02:38:00,578 | INFO     | fitting pss+swap vs Time
[2025-12-07 18:38:55] 2025-12-08 02:38:00,582 | INFO     | sum of square deviations: 324247121380.0
[2025-12-07 18:38:55] 2025-12-08 02:38:00,600 | INFO     | sum of deviations: 2312171477328.001
[2025-12-07 18:38:55] 2025-12-08 02:38:00,603 | INFO     | mean x: 1765130522.0
[2025-12-07 18:38:55] 2025-12-08 02:38:00,603 | INFO     | mean y: 3158817.0512315272
[2025-12-07 18:38:55] 2025-12-08 02:38:00,603 | INFO     | intersect: -12583797789.870937
[2025-12-07 18:38:55] 2025-12-08 02:38:00,603 | INFO     | chi2: 4.65714346713617
[2025-12-07 18:38:55] 2025-12-08 02:38:00,604 | INFO     | sum of square deviations: 319478855232.5
[2025-12-07 18:38:55] 2025-12-08 02:38:00,615 | INFO     | sum of deviations: 2598068727911.5005
[2025-12-07 18:38:55] 2025-12-08 02:38:00,615 | INFO     | mean x: 1765130369.5
[2025-12-07 18:38:55] 2025-12-08 02:38:00,615 | INFO     | mean y: 3167947.1712871287
[2025-12-07 18:38:55] 2025-12-08 02:38:00,615 | INFO     | intersect: -14351240610.939459
[2025-12-07 18:38:55] 2025-12-08 02:38:00,616 | INFO     | chi2: 2.2184907387267216
[2025-12-07 18:38:55] 2025-12-08 02:38:00,616 | INFO     | current chi2=2.2184907387267216 (change=52.363702033621394 %)
[2025-12-07 18:38:55] 2025-12-08 02:38:00,616 | INFO     | sum of square deviations: 314757566710.0
[2025-12-07 18:38:55] 2025-12-08 02:38:00,632 | INFO     | sum of deviations: 2588492034283.999
[2025-12-07 18:38:55] 2025-12-08 02:38:00,633 | INFO     | mean x: 1765130217.0
[2025-12-07 18:38:55] 2025-12-08 02:38:00,633 | INFO     | mean y: 3167636.111442786
[2025-12-07 18:38:55] 2025-12-08 02:38:00,633 | INFO     | intersect: -14512847193.765963
[2025-12-07 18:38:55] 2025-12-08 02:38:00,633 | INFO     | chi2: 2.1954848011140444
[2025-12-07 18:38:55] 2025-12-08 02:38:00,633 | INFO     | current chi2=2.1954848011140444 (change=1.0370085036226577 %)
[2025-12-07 18:38:55] 2025-12-08 02:38:00,633 | INFO     | right removable region: 1004
[2025-12-07 18:38:55] 2025-12-08 02:38:00,634 | INFO     | sum of square deviations: 319478855232.5
[2025-12-07 18:38:55] 2025-12-08 02:38:00,653 | INFO     | sum of deviations: 2042280234117.998
[2025-12-07 18:38:55] 2025-12-08 02:38:00,653 | INFO     | mean x: 1765130674.5
[2025-12-07 18:38:55] 2025-12-08 02:38:00,653 | INFO     | mean y: 3167435.9425742575
[2025-12-07 18:38:55] 2025-12-08 02:38:00,653 | INFO     | intersect: -11280494778.70781
[2025-12-07 18:38:55] 2025-12-08 02:38:00,654 | INFO     | chi2: 2.788110511892971
[2025-12-07 18:38:55] 2025-12-08 02:38:00,654 | INFO     | current chi2=2.788110511892971 (change=40.13260421183736 %)
[2025-12-07 18:38:55] 2025-12-08 02:38:00,654 | INFO     | sum of square deviations: 314757566710.0
[2025-12-07 18:38:55] 2025-12-08 02:38:00,668 | INFO     | sum of deviations: 1948780996022.9998
[2025-12-07 18:38:55] 2025-12-08 02:38:00,668 | INFO     | mean x: 1765130827.0
[2025-12-07 18:38:55] 2025-12-08 02:38:00,668 | INFO     | mean y: 3170455.497512438
[2025-12-07 18:38:55] 2025-12-08 02:38:00,668 | INFO     | intersect: -10925410061.5874
[2025-12-07 18:38:55] 2025-12-08 02:38:00,668 | INFO     | chi2: 2.697643182316139
[2025-12-07 18:38:55] 2025-12-08 02:38:00,668 | INFO     | current chi2=2.697643182316139 (change=3.2447540795436436 %)
[2025-12-07 18:38:55] 2025-12-08 02:38:00,669 | INFO     | left removable region: 20
[2025-12-07 18:38:55] 2025-12-08 02:38:00,669 | INFO     | sum of square deviations: 295435902110.0
[2025-12-07 18:38:55] 2025-12-08 02:38:00,680 | INFO     | sum of deviations: 2080979403053.5
[2025-12-07 18:38:55] 2025-12-08 02:38:00,680 | INFO     | mean x: 1765130796.5
[2025-12-07 18:38:55] 2025-12-08 02:38:00,680 | INFO     | mean y: 3184026.389227642
[2025-12-07 18:38:55] 2025-12-08 02:38:00,680 | INFO     | intersect: -12429972556.740849
[2025-12-07 18:38:55] 2025-12-08 02:38:00,681 | INFO     | chi2: 0.15437275860948255
[2025-12-07 18:38:55] 2025-12-08 02:38:00,681 | INFO     | current memory leak: 7.04 B/s (using 984 data points, chi2=0.15)
[2025-12-07 18:38:55] 2025-12-08 02:38:00,681 | INFO     | could have reported an average CPU frequency of 3999 MHz (38 samples)
[2025-12-07 18:38:55] 2025-12-08 02:38:00,682 | INFO     | ..............................
[2025-12-07 18:38:55] 2025-12-08 02:38:00,682 | INFO     | . Timing measurements:
[2025-12-07 18:38:55] 2025-12-08 02:38:00,682 | INFO     | . get job = 0 s
[2025-12-07 18:38:55] 2025-12-08 02:38:00,682 | INFO     | . initial setup = 3 s
[2025-12-07 18:38:55] 2025-12-08 02:38:00,682 | INFO     | . payload setup = 6 s
[2025-12-07 18:38:55] 2025-12-08 02:38:00,682 | INFO     | . stage-in = 0 s
[2025-12-07 18:38:55] 2025-12-08 02:38:00,682 | INFO     | . payload execution = 61874 s
[2025-12-07 18:38:55] 2025-12-08 02:38:00,682 | INFO     | . stage-out = 3 s
[2025-12-07 18:38:55] 2025-12-08 02:38:00,682 | INFO     | . log creation = 0 s
[2025-12-07 18:38:55] 2025-12-08 02:38:00,682 | INFO     | ..............................
[2025-12-07 18:38:55] 2025-12-08 02:38:00,732 | INFO     | 
[2025-12-07 18:38:55] 2025-12-08 02:38:00,732 | INFO     | job summary report
[2025-12-07 18:38:55] 2025-12-08 02:38:00,732 | INFO     | --------------------------------------------------
[2025-12-07 18:38:55] 2025-12-08 02:38:00,732 | INFO     | PanDA job id: 6893854786
[2025-12-07 18:38:55] 2025-12-08 02:38:00,732 | INFO     | task id: 47523449
[2025-12-07 18:38:55] 2025-12-08 02:38:00,733 | INFO     | errors: (none)
[2025-12-07 18:38:55] 2025-12-08 02:38:00,733 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-07 18:38:55] 2025-12-08 02:38:00,733 | INFO     | pilot state: finished 
[2025-12-07 18:38:55] 2025-12-08 02:38:00,733 | INFO     | transexitcode: 0
[2025-12-07 18:38:55] 2025-12-08 02:38:00,733 | INFO     | exeerrorcode: 0
[2025-12-07 18:38:55] 2025-12-08 02:38:00,733 | INFO     | exeerrordiag: 
[2025-12-07 18:38:55] 2025-12-08 02:38:00,733 | INFO     | exitcode: 0
[2025-12-07 18:38:55] 2025-12-08 02:38:00,733 | INFO     | exitmsg: OK
[2025-12-07 18:38:55] 2025-12-08 02:38:00,733 | INFO     | cpuconsumptiontime: 137099 s
[2025-12-07 18:38:55] 2025-12-08 02:38:00,733 | INFO     | nevents: 1000
[2025-12-07 18:38:55] 2025-12-08 02:38:00,733 | INFO     | neventsw: 0
[2025-12-07 18:38:55] 2025-12-08 02:38:00,733 | INFO     | pid: 1677180
[2025-12-07 18:38:55] 2025-12-08 02:38:00,733 | INFO     | pgrp: 1677180
[2025-12-07 18:38:55] 2025-12-08 02:38:00,733 | INFO     | corecount: 10
[2025-12-07 18:38:55] 2025-12-08 02:38:00,733 | INFO     | event service: False
[2025-12-07 18:38:55] 2025-12-08 02:38:00,733 | INFO     | sizes: {0: 2284328, 5: 2284590, 11: 2284646, 61884: 2337770, 61888: 2346792, 61891: 2346848, 61898: 2347222}
[2025-12-07 18:38:55] 2025-12-08 02:38:00,733 | INFO     | --------------------------------------------------
[2025-12-07 18:38:55] 2025-12-08 02:38:00,733 | INFO     | 
[2025-12-07 18:38:55] 2025-12-08 02:38:00,733 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc534/slots/0
[2025-12-07 18:38:55] 2025-12-08 02:38:00,755 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-07 18:38:55] 2025-12-08 02:38:00,755 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-07 18:38:55] 2025-12-08 02:38:00,755 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-07 18:38:55] 2025-12-08 02:38:00,755 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-07 18:38:55] 2025-12-08 02:38:00,755 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-07 18:38:55] 2025-12-08 02:38:00,755 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-07 18:38:55] 2025-12-08 02:38:00,755 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-07 18:38:55] 2025-12-08 02:38:00,755 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-07 18:38:55] 2025-12-08 02:38:00,755 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-07 18:38:55] 2025-12-08 02:38:00,755 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-07 18:38:55] 2025-12-08 02:38:00,755 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-07 18:38:55] 2025-12-08 02:38:00,756 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-07 18:38:55] 2025-12-08 02:38:00,756 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-07 18:38:55] 2025-12-08 02:38:00,756 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-07 18:38:55] 2025-12-08 02:38:00,756 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-07 18:38:55] 2025-12-08 02:38:00,756 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-07 18:38:55] 2025-12-08 02:38:00,756 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-07 18:38:55] 2025-12-08 02:38:00,756 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-07 18:38:55] 2025-12-08 02:38:00,756 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-07 18:38:55] 2025-12-08 02:38:00,756 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-07 18:38:55] 2025-12-08 02:38:00,756 | INFO     | job 6893854786 has completed (purged errors)
[2025-12-07 18:38:55] 2025-12-08 02:38:00,756 | INFO     | overall cleanup function is called
[2025-12-07 18:38:55] 2025-12-08 02:38:01,770 | INFO     | --- collectZombieJob: --- 10, [1677180]
[2025-12-07 18:38:55] 2025-12-08 02:38:01,770 | INFO     | zombie collector waiting for pid 1677180
[2025-12-07 18:38:55] 2025-12-08 02:38:01,770 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-07 18:38:55] 2025-12-08 02:38:01,770 | INFO     | collected zombie processes
[2025-12-07 18:38:55] 2025-12-08 02:38:01,770 | INFO     | will attempt to kill all subprocesses of pid=1677180
[2025-12-07 18:38:55] 2025-12-08 02:38:02,053 | INFO     | process IDs to be killed: [1677180] (in reverse order)
[2025-12-07 18:38:55] 2025-12-08 02:38:02,223 | WARNING  | found no corresponding commands to process id(s)
[2025-12-07 18:38:55] 2025-12-08 02:38:02,224 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-07 18:38:55] 2025-12-08 02:38:02,229 | INFO     | did not find any defunct processes belonging to 1677180
[2025-12-07 18:38:55] 2025-12-08 02:38:02,233 | INFO     | did not find any defunct processes belonging to 1677180
[2025-12-07 18:38:55] 2025-12-08 02:38:02,234 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-07 18:38:55] 2025-12-08 02:38:02,234 | INFO     | ready for new job
[2025-12-07 18:38:55] 2025-12-08 02:38:02,234 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-07 18:38:55] 2025-12-08 02:38:02,237 | INFO     | ***************************************
[2025-12-07 18:38:55] 2025-12-08 02:38:02,237 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-07 18:38:55] 2025-12-08 02:38:02,237 | INFO     | ***************************************
[2025-12-07 18:38:55] 2025-12-08 02:38:02,237 | INFO     | 
[2025-12-07 18:38:55] 2025-12-08 02:38:02,238 | INFO     | architecture information:
[2025-12-07 18:38:55] 2025-12-08 02:38:02,239 | INFO     | executing command: cat /etc/os-release
[2025-12-07 18:38:55] 2025-12-08 02:38:02,254 | INFO     | cat /etc/os-release:
[2025-12-07 18:38:55] NAME="CentOS Linux"
[2025-12-07 18:38:55] VERSION="7 (Core)"
[2025-12-07 18:38:55] ID="centos"
[2025-12-07 18:38:55] ID_LIKE="rhel fedora"
[2025-12-07 18:38:55] VERSION_ID="7"
[2025-12-07 18:38:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-07 18:38:55] ANSI_COLOR="0;31"
[2025-12-07 18:38:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-07 18:38:55] HOME_URL="https://www.centos.org/"
[2025-12-07 18:38:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-07 18:38:55] 
[2025-12-07 18:38:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-07 18:38:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-07 18:38:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-07 18:38:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-07 18:38:55] 
[2025-12-07 18:38:55] 2025-12-08 02:38:02,254 | INFO     | ***************************************
[2025-12-07 18:38:55] 2025-12-08 02:38:02,756 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc534/slots/0
[2025-12-07 18:38:55] 2025-12-08 02:38:02,776 | INFO     | sufficient remaining disk space (177298472960 B)
[2025-12-07 18:38:55] 2025-12-08 02:38:02,776 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-07 18:38:55] 2025-12-08 02:38:02,777 | INFO     | current server update state: UPDATING_FINAL
[2025-12-07 18:38:55] 2025-12-08 02:38:02,777 | INFO     | update_server=False
[2025-12-07 18:38:55] 2025-12-08 02:38:02,777 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-07 18:38:55] 2025-12-08 02:38:02,777 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-07 18:38:55] 2025-12-08 02:38:02,777 | INFO     | aborting loop
[2025-12-07 18:38:55] 2025-12-08 02:38:02,815 | INFO     | all payload control threads have been joined
[2025-12-07 18:38:55] 2025-12-08 02:38:02,903 | INFO     | all data control threads have been joined
[2025-12-07 18:38:55] 2025-12-08 02:38:03,029 | INFO     | all job control threads have been joined
[2025-12-07 18:38:55] 2025-12-08 02:38:03,745 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-07 18:38:55] 2025-12-08 02:38:03,782 | INFO     | [job] retrieve thread has finished
[2025-12-07 18:38:55] 2025-12-08 02:38:03,782 | INFO     | [job] job monitor thread has finished
[2025-12-07 18:38:55] 2025-12-08 02:38:03,820 | INFO     | [payload] control thread has finished
[2025-12-07 18:38:55] 2025-12-08 02:38:03,833 | INFO     | [payload] validate_post thread has finished
[2025-12-07 18:38:55] 2025-12-08 02:38:03,906 | INFO     | [payload] failed_post thread has finished
[2025-12-07 18:38:55] 2025-12-08 02:38:03,908 | INFO     | [data] control thread has finished
[2025-12-07 18:38:55] 2025-12-08 02:38:03,922 | INFO     | [data] copytool_in thread has finished
[2025-12-07 18:38:55] 2025-12-08 02:38:04,037 | INFO     | [job] control thread has finished
[2025-12-07 18:38:55] 2025-12-08 02:38:04,111 | INFO     | [payload] validate_pre thread has finished
[2025-12-07 18:38:55] 2025-12-08 02:38:04,198 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-07 18:38:55] 2025-12-08 02:38:04,273 | INFO     | [payload] execute_payloads thread has finished
[2025-12-07 18:38:55] 2025-12-08 02:38:04,750 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-07 18:38:55] 2025-12-08 02:38:04,897 | INFO     | [job] create_data_payload thread has finished
[2025-12-07 18:38:55] 2025-12-08 02:38:05,233 | INFO     | [job] validate thread has finished
[2025-12-07 18:38:55] 2025-12-08 02:38:05,745 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-07 18:38:55] 2025-12-08 02:38:05,750 | INFO     | [data] copytool_out thread has finished
[2025-12-07 18:38:55] 2025-12-08 02:38:06,750 | INFO     | [job] queue monitor thread has finished
[2025-12-07 18:38:55] 2025-12-08 02:38:08,203 | INFO     | [data] queue_monitor thread has finished
[2025-12-07 18:38:55] 2025-12-08 02:38:32,647 | INFO     | PID=1670476 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-07 18:38:55] 2025-12-08 02:38:32,648 | INFO     | .. there are 12 such processes running
[2025-12-07 18:38:55] 2025-12-08 02:38:32,648 | INFO     | found 0 job(s) in 20 queues
[2025-12-07 18:38:55] 2025-12-08 02:38:32,648 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-07 18:38:55] 2025-12-08 02:38:32,648 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-07 18:38:55] 2025-12-08 02:38:49,083 | INFO     | [monitor] cgroup control has ended
[2025-12-07 18:38:55] 2025-12-08 02:38:50,217 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129824101316416)>', '<ExcThread(monitor, started 129823053682432)>']
[2025-12-07 18:38:55] 2025-12-08 02:38:50,744 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-07 18:38:55] 2025-12-08 02:38:50,744 | INFO     | [monitor] control thread has ended
[2025-12-07 18:38:55] 2025-12-08 02:38:55,242 | INFO     | all workflow threads have been joined
[2025-12-07 18:38:55] 2025-12-08 02:38:55,242 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-07 18:38:55] 2025-12-08 02:38:55,242 | INFO     | traces error code: 0
[2025-12-07 18:38:55] 2025-12-08 02:38:55,242 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-07 18:38:55] 2025-12-08 02:38:55,338 [wrapper] ==== pilot stdout END ====
[2025-12-07 18:38:55] 2025-12-08 02:38:55,339 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-07 18:38:55] 2025-12-08 02:38:55,341 [wrapper] pilotpid: 1670476
[2025-12-07 18:38:55] 2025-12-08 02:38:55,343 [wrapper] Pilot exit status: 0
[2025-12-07 18:38:55] 2025-12-08 02:38:55,356 [wrapper] pandaids: 6893854786
[2025-12-07 18:38:55] 2025-12-08 02:38:55,399 [wrapper] cleanup supervisor_pilot 3066485 1670477
[2025-12-07 18:38:55] 2025-12-08 02:38:55,401 [wrapper] Test setup, not cleaning
[2025-12-07 18:38:55] 2025-12-08 02:38:55,404 [wrapper] apfmon messages muted
[2025-12-07 18:38:55] 2025-12-08 02:38:55,406 [wrapper] ==== wrapper stdout END ====
[2025-12-07 18:38:55] 2025-12-08 02:38:55,408 [wrapper] ==== wrapper stderr END ====
[2025-12-07 18:38:55]  *** Error codes and diagnostics ***
[2025-12-07 18:38:55]     "exeErrorCode": 0,
[2025-12-07 18:38:55]     "exeErrorDiag": "",
[2025-12-07 18:38:55]     "pilotErrorCode": 0,
[2025-12-07 18:38:55]     "pilotErrorDiag": "",
[2025-12-07 18:38:55]  *** Listing of results directory ***
[2025-12-07 18:38:55] total 1334324
[2025-12-07 18:38:55] -rw-r--r-- 1 root root    576529 Nov 20 04:07 pilot3.tar.gz
[2025-12-07 18:38:55] -rw-r--r-- 1 root root      5112 Nov 20 04:24 queuedata.json
[2025-12-07 18:38:55] -rwx------ 1 4871 1028     36292 Nov 20 04:24 runpilot2-wrapper.sh
[2025-12-07 18:38:55] -rw-r--r-- 1 root root       100 Dec  7 01:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-07 18:38:55] -rwxr-xr-x 1 root root      7986 Dec  7 01:25 run_atlas
[2025-12-07 18:38:55] -rw-r--r-- 1 root root       105 Dec  7 01:25 job.xml
[2025-12-07 18:38:55] -rw-r--r-- 1 root root      9516 Dec  7 01:25 init_data.xml
[2025-12-07 18:38:55] -rw-r--r-- 2 root root 410341286 Dec  7 01:25 EVNT.47493127._000425.pool.root.1
[2025-12-07 18:38:55] -rw-r--r-- 2 root root    590102 Dec  7 01:25 input.tar.gz
[2025-12-07 18:38:55] -rw-r--r-- 2 root root     15847 Dec  7 01:25 start_atlas.sh
[2025-12-07 18:38:55] drwxrwx--x 2 root root      4096 Dec  7 01:25 shared
[2025-12-07 18:38:55] -rw-r--r-- 1 root root         0 Dec  7 01:25 boinc_lockfile
[2025-12-07 18:38:55] -rw-r--r-- 1 root root      2785 Dec  7 01:25 pandaJob.out
[2025-12-07 18:38:55] -rw------- 1 root root    981443 Dec  7 01:26 agis_schedconf.cvmfs.json
[2025-12-07 18:38:55] drwxr-xr-x 5  320  320      4096 Dec  7 01:26 pilot3
[2025-12-07 18:38:55] -rw-r--r-- 1 root root       533 Dec  7 18:31 boinc_task_state.xml
[2025-12-07 18:38:55] -rw------- 1 root root 929725051 Dec  7 18:37 HITS.47523449._004243.pool.root.1
[2025-12-07 18:38:55] -rw------- 1 root root        95 Dec  7 18:37 pilot_heartbeat.json
[2025-12-07 18:38:55] -rw------- 1 root root      1054 Dec  7 18:37 memory_monitor_summary.json
[2025-12-07 18:38:55] -rw------- 1 root root   1516240 Dec  7 18:37 agis_ddmendpoints.agis.ALL.json
[2025-12-07 18:38:55] -rw------- 1 root root   2381068 Dec  7 18:37 log.47523449._004243.job.log.tgz.1
[2025-12-07 18:38:55] -rw------- 1 root root      8600 Dec  7 18:38 heartbeat.json
[2025-12-07 18:38:55] -rw-r--r-- 1 root root      8192 Dec  7 18:38 boinc_mmap_file
[2025-12-07 18:38:55] -rw-r--r-- 1 root root        29 Dec  7 18:38 wrapper_checkpoint.txt
[2025-12-07 18:38:55] -rw------- 1 root root      4839 Dec  7 18:38 pilotlog.txt
[2025-12-07 18:38:55] -rw------- 1 root root   8806890 Dec  7 18:38 log.47523449._004243.job.log.1
[2025-12-07 18:38:55] -rw------- 1 root root       353 Dec  7 18:38 output.list
[2025-12-07 18:38:55] -rw-r--r-- 1 root root       620 Dec  7 18:38 runtime_log
[2025-12-07 18:38:55] -rw------- 1 root root  11202560 Dec  7 18:38 result.tar.gz
[2025-12-07 18:38:55] -rw-r--r-- 1 root root      9021 Dec  7 18:38 runtime_log.err
[2025-12-07 18:38:55] -rw------- 1 root root       663 Dec  7 18:38 GH2MDmitIg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmqmHKDmW5sD0n.diag
[2025-12-07 18:38:55] -rw-r--r-- 1 root root     21412 Dec  7 18:38 stderr.txt
[2025-12-07 18:38:55] HITS file was successfully produced:
[2025-12-07 18:38:55] -rw------- 1 root root 929725051 Dec  7 18:37 shared/HITS.pool.root.1
[2025-12-07 18:38:55]  *** Contents of shared directory: ***
[2025-12-07 18:38:55] total 1320204
[2025-12-07 18:38:55] -rw-r--r-- 2 root root 410341286 Dec  7 01:25 ATLAS.root_0
[2025-12-07 18:38:55] -rw-r--r-- 2 root root    590102 Dec  7 01:25 input.tar.gz
[2025-12-07 18:38:55] -rw-r--r-- 2 root root     15847 Dec  7 01:25 start_atlas.sh
[2025-12-07 18:38:55] -rw------- 1 root root 929725051 Dec  7 18:37 HITS.pool.root.1
[2025-12-07 18:38:55] -rw------- 1 root root  11202560 Dec  7 18:38 result.tar.gz
18:38:56 (1666618): run_atlas exited; CPU time 137291.529573
18:38:56 (1666618): called boinc_finish(0)

</stderr_txt>
]]>

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