Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
05:38:47 (3956760): wrapper (7.7.26015): starting
05:38:47 (3956760): wrapper: running run_atlas (--nthreads 10)
[2025-12-08 05:38:47] Arguments: --nthreads 10
[2025-12-08 05:38:47] Threads: 10
[2025-12-08 05:38:47] Checking for CVMFS
[2025-12-08 05:38:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-08 05:38:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-08 05:38:47] Running cvmfs_config stat atlas.cern.ch
[2025-12-08 05:38:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-08 05:38:47] 2.13.3.0 11319 2794 75680 153767 2 110 2292129 4096001 12753 130560 0 403566728 100.000 165601 645 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-12-08 05:38:47] CVMFS is ok
[2025-12-08 05:38:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-08 05:38:47] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-08 05:38:47] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-08 05:38:47] Further information can be found at the LHC@home message board.
[2025-12-08 05:38:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-08 05:38:47] Checking for apptainer binary...
[2025-12-08 05:38:47] apptainer is not installed, using version from CVMFS
[2025-12-08 05:38:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-08 05:38:47] 7950x-linux
[2025-12-08 05:38:47] apptainer works
[2025-12-08 05:38:47] Set ATHENA_PROC_NUMBER=10
[2025-12-08 05:38:47] Set ATHENA_CORE_NUMBER=10
[2025-12-08 05:38:47] Starting ATLAS job with PandaID=6895343975
[2025-12-08 05:38:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc534/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-08 22:18:56]  *** The last 200 lines of the pilot log: ***
[2025-12-08 22:18:56] 2025-12-09 06:18:22,371 | INFO     | monitor loop #4342: job 0:6895343975 is in state 'finished'
[2025-12-08 22:18:56] 2025-12-09 06:18:22,371 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-08 22:18:56] 2025-12-09 06:18:22,559 | INFO     | time since job start (59961s) is within the limit (172800.0s)
[2025-12-08 22:18:56] 2025-12-09 06:18:24,209 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-08 22:18:56] 2025-12-09 06:18:24,212 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3999.9889687499985
[2025-12-08 22:18:56] 2025-12-09 06:18:24,216 | INFO     | using path: /var/lib/multiboinc/boinc534/slots/3/PanDA_Pilot-6895343975/memory_monitor_summary.json (trf name=prmon)
[2025-12-08 22:18:56] 2025-12-09 06:18:24,216 | INFO     | extracted standard info from prmon json
[2025-12-08 22:18:56] 2025-12-09 06:18:24,216 | INFO     | extracted standard memory fields from prmon json
[2025-12-08 22:18:56] 2025-12-09 06:18:24,216 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-08 22:18:56] 2025-12-09 06:18:24,226 | INFO     | fitting pss+swap vs Time
[2025-12-08 22:18:56] 2025-12-09 06:18:24,227 | INFO     | sum of square deviations: 294536064514.999
[2025-12-08 22:18:56] 2025-12-09 06:18:24,241 | INFO     | sum of deviations: 2170166365116.5398
[2025-12-08 22:18:56] 2025-12-09 06:18:24,244 | INFO     | mean x: 1765231122.0010173
[2025-12-08 22:18:56] 2025-12-09 06:18:24,244 | INFO     | mean y: 3155272.4577822993
[2025-12-08 22:18:56] 2025-12-09 06:18:24,244 | INFO     | intersect: -13003215318.972647
[2025-12-08 22:18:56] 2025-12-09 06:18:24,245 | INFO     | chi2: 4.766007103193048
[2025-12-08 22:18:56] 2025-12-09 06:18:24,245 | INFO     | sum of square deviations: 290064436792.49866
[2025-12-08 22:18:56] 2025-12-09 06:18:24,258 | INFO     | sum of deviations: 2468105353677.3184
[2025-12-08 22:18:56] 2025-12-09 06:18:24,258 | INFO     | mean x: 1765230969.5010226
[2025-12-08 22:18:56] 2025-12-09 06:18:24,258 | INFO     | mean y: 3165422.180981595
[2025-12-08 22:18:56] 2025-12-09 06:18:24,258 | INFO     | intersect: -15016862729.078228
[2025-12-08 22:18:56] 2025-12-09 06:18:24,259 | INFO     | chi2: 2.2641377690857643
[2025-12-08 22:18:56] 2025-12-09 06:18:24,259 | INFO     | current chi2=2.2641377690857643 (change=52.49403284420462 %)
[2025-12-08 22:18:56] 2025-12-09 06:18:24,259 | INFO     | sum of square deviations: 285638298294.9991
[2025-12-08 22:18:56] 2025-12-09 06:18:24,274 | INFO     | sum of deviations: 2472929681040.945
[2025-12-08 22:18:56] 2025-12-09 06:18:24,274 | INFO     | mean x: 1765230817.0010278
[2025-12-08 22:18:56] 2025-12-09 06:18:24,274 | INFO     | mean y: 3165585.058581706
[2025-12-08 22:18:56] 2025-12-09 06:18:24,274 | INFO     | intersect: -15279419794.096874
[2025-12-08 22:18:56] 2025-12-09 06:18:24,275 | INFO     | chi2: 2.1999723727502736
[2025-12-08 22:18:56] 2025-12-09 06:18:24,275 | INFO     | current chi2=2.1999723727502736 (change=2.833988161480121 %)
[2025-12-08 22:18:56] 2025-12-09 06:18:24,275 | INFO     | right removable region: 972
[2025-12-08 22:18:56] 2025-12-09 06:18:24,275 | INFO     | sum of square deviations: 290064436182.49866
[2025-12-08 22:18:56] 2025-12-09 06:18:24,288 | INFO     | sum of deviations: 1906637196504.9402
[2025-12-08 22:18:56] 2025-12-09 06:18:24,288 | INFO     | mean x: 1765231274.5010226
[2025-12-08 22:18:56] 2025-12-09 06:18:24,288 | INFO     | mean y: 3164246.0593047035
[2025-12-08 22:18:56] 2025-12-09 06:18:24,288 | INFO     | intersect: -11599966605.459204
[2025-12-08 22:18:56] 2025-12-09 06:18:24,289 | INFO     | chi2: 2.863153182692825
[2025-12-08 22:18:56] 2025-12-09 06:18:24,292 | INFO     | current chi2=2.863153182692825 (change=39.92553681309836 %)
[2025-12-08 22:18:56] 2025-12-09 06:18:24,292 | INFO     | sum of square deviations: 285638297074.9991
[2025-12-08 22:18:56] 2025-12-09 06:18:24,303 | INFO     | sum of deviations: 1819065704020.2961
[2025-12-08 22:18:56] 2025-12-09 06:18:24,303 | INFO     | mean x: 1765231427.0010278
[2025-12-08 22:18:56] 2025-12-09 06:18:24,303 | INFO     | mean y: 3167262.7019527233
[2025-12-08 22:18:56] 2025-12-09 06:18:24,303 | INFO     | intersect: -11238574413.391489
[2025-12-08 22:18:56] 2025-12-09 06:18:24,304 | INFO     | chi2: 2.7813416344735513
[2025-12-08 22:18:56] 2025-12-09 06:18:24,304 | INFO     | current chi2=2.7813416344735513 (change=2.857393335215443 %)
[2025-12-08 22:18:56] 2025-12-09 06:18:24,304 | INFO     | left removable region: 20
[2025-12-08 22:18:56] 2025-12-09 06:18:24,304 | INFO     | sum of square deviations: 267540008031.9988
[2025-12-08 22:18:56] 2025-12-09 06:18:24,318 | INFO     | sum of deviations: 1994256054182.8801
[2025-12-08 22:18:56] 2025-12-09 06:18:24,318 | INFO     | mean x: 1765231396.5010505
[2025-12-08 22:18:56] 2025-12-09 06:18:24,319 | INFO     | mean y: 3182056.1218487397
[2025-12-08 22:18:56] 2025-12-09 06:18:24,319 | INFO     | intersect: -13154937454.306198
[2025-12-08 22:18:56] 2025-12-09 06:18:24,319 | INFO     | chi2: 0.15673704756238058
[2025-12-08 22:18:56] 2025-12-09 06:18:24,319 | INFO     | current memory leak: 7.45 B/s (using 952 data points, chi2=0.16)
[2025-12-08 22:18:56] 2025-12-09 06:18:24,320 | INFO     | could have reported an average CPU frequency of 3999 MHz (37 samples)
[2025-12-08 22:18:56] 2025-12-09 06:18:24,320 | INFO     | ..............................
[2025-12-08 22:18:56] 2025-12-09 06:18:24,320 | INFO     | . Timing measurements:
[2025-12-08 22:18:56] 2025-12-09 06:18:24,320 | INFO     | . get job = 0 s
[2025-12-08 22:18:56] 2025-12-09 06:18:24,320 | INFO     | . initial setup = 3 s
[2025-12-08 22:18:56] 2025-12-09 06:18:24,320 | INFO     | . payload setup = 6 s
[2025-12-08 22:18:56] 2025-12-09 06:18:24,320 | INFO     | . stage-in = 0 s
[2025-12-08 22:18:56] 2025-12-09 06:18:24,320 | INFO     | . payload execution = 59919 s
[2025-12-08 22:18:56] 2025-12-09 06:18:24,320 | INFO     | . stage-out = 6 s
[2025-12-08 22:18:56] 2025-12-09 06:18:24,320 | INFO     | . log creation = 0 s
[2025-12-08 22:18:56] 2025-12-09 06:18:24,320 | INFO     | ..............................
[2025-12-08 22:18:56] 2025-12-09 06:18:24,376 | INFO     | 
[2025-12-08 22:18:56] 2025-12-09 06:18:24,376 | INFO     | job summary report
[2025-12-08 22:18:56] 2025-12-09 06:18:24,376 | INFO     | --------------------------------------------------
[2025-12-08 22:18:56] 2025-12-09 06:18:24,376 | INFO     | PanDA job id: 6895343975
[2025-12-08 22:18:56] 2025-12-09 06:18:24,376 | INFO     | task id: 47556137
[2025-12-08 22:18:56] 2025-12-09 06:18:24,376 | INFO     | errors: (none)
[2025-12-08 22:18:56] 2025-12-09 06:18:24,376 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-08 22:18:56] 2025-12-09 06:18:24,376 | INFO     | pilot state: finished 
[2025-12-08 22:18:56] 2025-12-09 06:18:24,376 | INFO     | transexitcode: 0
[2025-12-08 22:18:56] 2025-12-09 06:18:24,376 | INFO     | exeerrorcode: 0
[2025-12-08 22:18:56] 2025-12-09 06:18:24,376 | INFO     | exeerrordiag: 
[2025-12-08 22:18:56] 2025-12-09 06:18:24,376 | INFO     | exitcode: 0
[2025-12-08 22:18:56] 2025-12-09 06:18:24,376 | INFO     | exitmsg: OK
[2025-12-08 22:18:56] 2025-12-09 06:18:24,376 | INFO     | cpuconsumptiontime: 132965 s
[2025-12-08 22:18:56] 2025-12-09 06:18:24,376 | INFO     | nevents: 1000
[2025-12-08 22:18:56] 2025-12-09 06:18:24,376 | INFO     | neventsw: 0
[2025-12-08 22:18:56] 2025-12-09 06:18:24,376 | INFO     | pid: 3967306
[2025-12-08 22:18:56] 2025-12-09 06:18:24,376 | INFO     | pgrp: 3967306
[2025-12-08 22:18:56] 2025-12-09 06:18:24,376 | INFO     | corecount: 10
[2025-12-08 22:18:56] 2025-12-09 06:18:24,376 | INFO     | event service: False
[2025-12-08 22:18:56] 2025-12-09 06:18:24,376 | INFO     | sizes: {0: 2284107, 1: 2284306, 6: 2284568, 11: 2284596, 59930: 2337052, 59937: 2346074, 59940: 2346258, 59946: 2346504}
[2025-12-08 22:18:56] 2025-12-09 06:18:24,376 | INFO     | --------------------------------------------------
[2025-12-08 22:18:56] 2025-12-09 06:18:24,376 | INFO     | 
[2025-12-08 22:18:56] 2025-12-09 06:18:24,377 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc534/slots/3
[2025-12-08 22:18:56] 2025-12-09 06:18:24,404 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-08 22:18:56] 2025-12-09 06:18:24,404 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-08 22:18:56] 2025-12-09 06:18:24,404 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-08 22:18:56] 2025-12-09 06:18:24,404 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-08 22:18:56] 2025-12-09 06:18:24,404 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-08 22:18:56] 2025-12-09 06:18:24,404 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-08 22:18:56] 2025-12-09 06:18:24,404 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-08 22:18:56] 2025-12-09 06:18:24,404 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-08 22:18:56] 2025-12-09 06:18:24,404 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-08 22:18:56] 2025-12-09 06:18:24,404 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-08 22:18:56] 2025-12-09 06:18:24,404 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-08 22:18:56] 2025-12-09 06:18:24,404 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-08 22:18:56] 2025-12-09 06:18:24,404 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-08 22:18:56] 2025-12-09 06:18:24,404 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-08 22:18:56] 2025-12-09 06:18:24,404 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-08 22:18:56] 2025-12-09 06:18:24,404 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-08 22:18:56] 2025-12-09 06:18:24,404 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-08 22:18:56] 2025-12-09 06:18:24,404 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-08 22:18:56] 2025-12-09 06:18:24,404 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-08 22:18:56] 2025-12-09 06:18:24,405 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-08 22:18:56] 2025-12-09 06:18:24,405 | INFO     | job 6895343975 has completed (purged errors)
[2025-12-08 22:18:56] 2025-12-09 06:18:24,405 | INFO     | overall cleanup function is called
[2025-12-08 22:18:56] 2025-12-09 06:18:25,422 | INFO     | --- collectZombieJob: --- 10, [3967306]
[2025-12-08 22:18:56] 2025-12-09 06:18:25,422 | INFO     | zombie collector waiting for pid 3967306
[2025-12-08 22:18:56] 2025-12-09 06:18:25,422 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-08 22:18:56] 2025-12-09 06:18:25,422 | INFO     | collected zombie processes
[2025-12-08 22:18:56] 2025-12-09 06:18:25,422 | INFO     | will attempt to kill all subprocesses of pid=3967306
[2025-12-08 22:18:56] 2025-12-09 06:18:25,717 | INFO     | process IDs to be killed: [3967306] (in reverse order)
[2025-12-08 22:18:56] 2025-12-09 06:18:25,860 | WARNING  | found no corresponding commands to process id(s)
[2025-12-08 22:18:56] 2025-12-09 06:18:25,860 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-08 22:18:56] 2025-12-09 06:18:25,868 | INFO     | did not find any defunct processes belonging to 3967306
[2025-12-08 22:18:56] 2025-12-09 06:18:25,873 | INFO     | did not find any defunct processes belonging to 3967306
[2025-12-08 22:18:56] 2025-12-09 06:18:25,880 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-08 22:18:56] 2025-12-09 06:18:25,880 | INFO     | ready for new job
[2025-12-08 22:18:56] 2025-12-09 06:18:25,880 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-08 22:18:56] 2025-12-09 06:18:25,883 | INFO     | ***************************************
[2025-12-08 22:18:56] 2025-12-09 06:18:25,883 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-08 22:18:56] 2025-12-09 06:18:25,884 | INFO     | ***************************************
[2025-12-08 22:18:56] 2025-12-09 06:18:25,884 | INFO     | 
[2025-12-08 22:18:56] 2025-12-09 06:18:25,885 | INFO     | architecture information:
[2025-12-08 22:18:56] 2025-12-09 06:18:25,885 | INFO     | executing command: cat /etc/os-release
[2025-12-08 22:18:56] 2025-12-09 06:18:25,905 | INFO     | cat /etc/os-release:
[2025-12-08 22:18:56] NAME="CentOS Linux"
[2025-12-08 22:18:56] VERSION="7 (Core)"
[2025-12-08 22:18:56] ID="centos"
[2025-12-08 22:18:56] ID_LIKE="rhel fedora"
[2025-12-08 22:18:56] VERSION_ID="7"
[2025-12-08 22:18:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-08 22:18:56] ANSI_COLOR="0;31"
[2025-12-08 22:18:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-08 22:18:56] HOME_URL="https://www.centos.org/"
[2025-12-08 22:18:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-08 22:18:56] 
[2025-12-08 22:18:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-08 22:18:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-08 22:18:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-08 22:18:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-08 22:18:56] 
[2025-12-08 22:18:56] 2025-12-09 06:18:25,905 | INFO     | ***************************************
[2025-12-08 22:18:56] 2025-12-09 06:18:26,407 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc534/slots/3
[2025-12-08 22:18:56] 2025-12-09 06:18:26,425 | INFO     | sufficient remaining disk space (174520795136 B)
[2025-12-08 22:18:56] 2025-12-09 06:18:26,425 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-08 22:18:56] 2025-12-09 06:18:26,425 | INFO     | current server update state: UPDATING_FINAL
[2025-12-08 22:18:56] 2025-12-09 06:18:26,425 | INFO     | update_server=False
[2025-12-08 22:18:56] 2025-12-09 06:18:26,425 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-08 22:18:56] 2025-12-09 06:18:26,425 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-08 22:18:56] 2025-12-09 06:18:26,433 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-08 22:18:56] 2025-12-09 06:18:26,433 | INFO     | aborting loop
[2025-12-08 22:18:56] 2025-12-09 06:18:27,209 | INFO     | all data control threads have been joined
[2025-12-08 22:18:56] 2025-12-09 06:18:27,430 | INFO     | [payload] failed_post thread has finished
[2025-12-08 22:18:56] 2025-12-09 06:18:27,430 | INFO     | [job] retrieve thread has finished
[2025-12-08 22:18:56] 2025-12-09 06:18:27,438 | INFO     | [job] job monitor thread has finished
[2025-12-08 22:18:56] 2025-12-09 06:18:27,545 | INFO     | [job] create_data_payload thread has finished
[2025-12-08 22:18:56] 2025-12-09 06:18:27,659 | INFO     | all payload control threads have been joined
[2025-12-08 22:18:56] 2025-12-09 06:18:27,682 | INFO     | [job] validate thread has finished
[2025-12-08 22:18:56] 2025-12-09 06:18:27,705 | INFO     | [data] copytool_in thread has finished
[2025-12-08 22:18:56] 2025-12-09 06:18:27,849 | INFO     | all job control threads have been joined
[2025-12-08 22:18:56] 2025-12-09 06:18:28,048 | INFO     | [payload] validate_pre thread has finished
[2025-12-08 22:18:56] 2025-12-09 06:18:28,214 | INFO     | [data] control thread has finished
[2025-12-08 22:18:56] 2025-12-09 06:18:28,430 | INFO     | [data] copytool_out thread has finished
[2025-12-08 22:18:56] 2025-12-09 06:18:28,664 | INFO     | [payload] control thread has finished
[2025-12-08 22:18:56] 2025-12-09 06:18:28,676 | INFO     | [payload] validate_post thread has finished
[2025-12-08 22:18:56] 2025-12-09 06:18:28,854 | INFO     | [job] control thread has finished
[2025-12-08 22:18:56] 2025-12-09 06:18:28,911 | INFO     | [payload] execute_payloads thread has finished
[2025-12-08 22:18:56] 2025-12-09 06:18:28,911 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-08 22:18:56] 2025-12-09 06:18:29,109 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-08 22:18:56] 2025-12-09 06:18:29,390 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-08 22:18:56] 2025-12-09 06:18:30,395 | INFO     | [job] queue monitor thread has finished
[2025-12-08 22:18:56] 2025-12-09 06:18:33,114 | INFO     | [data] queue_monitor thread has finished
[2025-12-08 22:18:56] 2025-12-09 06:18:41,170 | INFO     | [monitor] cgroup control has ended
[2025-12-08 22:18:56] 2025-12-09 06:18:42,609 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135794324772672)>', '<ExcThread(monitor, started 135793846777600)>']
[2025-12-08 22:18:56] 2025-12-09 06:18:47,634 | INFO     | all workflow threads have been joined
[2025-12-08 22:18:56] 2025-12-09 06:18:47,634 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-08 22:18:56] 2025-12-09 06:18:47,634 | INFO     | traces error code: 0
[2025-12-08 22:18:56] 2025-12-09 06:18:47,634 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-08 22:18:56] 2025-12-09 06:18:55,966 | INFO     | PID=3960606 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-08 22:18:56] 2025-12-09 06:18:55,967 | INFO     | .. there are 14 such processes running
[2025-12-08 22:18:56] 2025-12-09 06:18:55,967 | INFO     | found 0 job(s) in 20 queues
[2025-12-08 22:18:56] 2025-12-09 06:18:55,967 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-08 22:18:56] 2025-12-09 06:18:55,967 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-08 22:18:56] 2025-12-09 06:18:55,967 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-08 22:18:56] 2025-12-09 06:18:55,967 | INFO     | [monitor] control thread has ended
[2025-12-08 22:18:56] 2025-12-09 06:18:56,059 [wrapper] ==== pilot stdout END ====
[2025-12-08 22:18:56] 2025-12-09 06:18:56,061 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-08 22:18:56] 2025-12-09 06:18:56,062 [wrapper] pilotpid: 3960606
[2025-12-08 22:18:56] 2025-12-09 06:18:56,064 [wrapper] Pilot exit status: 0
[2025-12-08 22:18:56] 2025-12-09 06:18:56,083 [wrapper] pandaids: 6895343975
[2025-12-08 22:18:56] 2025-12-09 06:18:56,141 [wrapper] cleanup supervisor_pilot 1089888 3960607
[2025-12-08 22:18:56] 2025-12-09 06:18:56,143 [wrapper] Test setup, not cleaning
[2025-12-08 22:18:56] 2025-12-09 06:18:56,144 [wrapper] apfmon messages muted
[2025-12-08 22:18:56] 2025-12-09 06:18:56,146 [wrapper] ==== wrapper stdout END ====
[2025-12-08 22:18:56] 2025-12-09 06:18:56,147 [wrapper] ==== wrapper stderr END ====
[2025-12-08 22:18:56]  *** Error codes and diagnostics ***
[2025-12-08 22:18:56]     "exeErrorCode": 0,
[2025-12-08 22:18:56]     "exeErrorDiag": "",
[2025-12-08 22:18:56]     "pilotErrorCode": 0,
[2025-12-08 22:18:56]     "pilotErrorDiag": "",
[2025-12-08 22:18:56]  *** Listing of results directory ***
[2025-12-08 22:18:56] total 1315984
[2025-12-08 22:18:56] -rw-r--r-- 1 root root      5112 Nov 22 08:22 queuedata.json
[2025-12-08 22:18:56] -rw-r--r-- 1 root root    576529 Nov 22 08:22 pilot3.tar.gz
[2025-12-08 22:18:56] -rwx------ 1 4871 1028     36292 Nov 22 08:23 runpilot2-wrapper.sh
[2025-12-08 22:18:56] -rw-r--r-- 1 root root       100 Dec  8 05:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-08 22:18:56] -rwxr-xr-x 1 root root      7986 Dec  8 05:38 run_atlas
[2025-12-08 22:18:56] -rw-r--r-- 1 root root       105 Dec  8 05:38 job.xml
[2025-12-08 22:18:56] -rw-r--r-- 2 root root 408706151 Dec  8 05:38 EVNT.47483658._000427.pool.root.1
[2025-12-08 22:18:56] -rw-r--r-- 1 root root      9523 Dec  8 05:38 init_data.xml
[2025-12-08 22:18:56] -rw-r--r-- 2 root root     15847 Dec  8 05:38 start_atlas.sh
[2025-12-08 22:18:56] drwxrwx--x 2 root root      4096 Dec  8 05:38 shared
[2025-12-08 22:18:56] -rw-r--r-- 2 root root    590103 Dec  8 05:38 input.tar.gz
[2025-12-08 22:18:56] -rw-r--r-- 1 root root         0 Dec  8 05:38 boinc_lockfile
[2025-12-08 22:18:56] -rw-r--r-- 1 root root      2785 Dec  8 05:38 pandaJob.out
[2025-12-08 22:18:56] -rw------- 1 root root    985712 Dec  8 05:38 agis_schedconf.cvmfs.json
[2025-12-08 22:18:56] drwxr-xr-x 5  320  320      4096 Dec  8 05:39 pilot3
[2025-12-08 22:18:56] -rw-r--r-- 1 root root       533 Dec  8 22:10 boinc_task_state.xml
[2025-12-08 22:18:56] -rw------- 1 root root 913198304 Dec  8 22:17 HITS.47556137._004229.pool.root.1
[2025-12-08 22:18:56] -rw------- 1 root root        95 Dec  8 22:18 pilot_heartbeat.json
[2025-12-08 22:18:56] -rw------- 1 root root      1055 Dec  8 22:18 memory_monitor_summary.json
[2025-12-08 22:18:56] -rw------- 1 root root   1516240 Dec  8 22:18 agis_ddmendpoints.agis.ALL.json
[2025-12-08 22:18:56] -rw------- 1 root root   2355170 Dec  8 22:18 log.47556137._004229.job.log.tgz.1
[2025-12-08 22:18:56] -rw------- 1 root root      8600 Dec  8 22:18 heartbeat.json
[2025-12-08 22:18:56] -rw-r--r-- 1 root root      8192 Dec  8 22:18 boinc_mmap_file
[2025-12-08 22:18:56] -rw-r--r-- 1 root root        29 Dec  8 22:18 wrapper_checkpoint.txt
[2025-12-08 22:18:56] -rw------- 1 root root       823 Dec  8 22:18 pilotlog.txt
[2025-12-08 22:18:56] -rw------- 1 root root   8523796 Dec  8 22:18 log.47556137._004229.job.log.1
[2025-12-08 22:18:56] -rw------- 1 root root       353 Dec  8 22:18 output.list
[2025-12-08 22:18:56] -rw-r--r-- 1 root root       620 Dec  8 22:18 runtime_log
[2025-12-08 22:18:56] -rw------- 1 root root  10895360 Dec  8 22:18 result.tar.gz
[2025-12-08 22:18:56] -rw-r--r-- 1 root root      9021 Dec  8 22:18 runtime_log.err
[2025-12-08 22:18:56] -rw------- 1 root root       662 Dec  8 22:18 P77LDmiZ5g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmhBIKDmtlJNdm.diag
[2025-12-08 22:18:56] -rw-r--r-- 1 root root     21488 Dec  8 22:18 stderr.txt
[2025-12-08 22:18:56] HITS file was successfully produced:
[2025-12-08 22:18:56] -rw------- 1 root root 913198304 Dec  8 22:17 shared/HITS.pool.root.1
[2025-12-08 22:18:56]  *** Contents of shared directory: ***
[2025-12-08 22:18:56] total 1302168
[2025-12-08 22:18:56] -rw-r--r-- 2 root root 408706151 Dec  8 05:38 ATLAS.root_0
[2025-12-08 22:18:56] -rw-r--r-- 2 root root     15847 Dec  8 05:38 start_atlas.sh
[2025-12-08 22:18:56] -rw-r--r-- 2 root root    590103 Dec  8 05:38 input.tar.gz
[2025-12-08 22:18:56] -rw------- 1 root root 913198304 Dec  8 22:17 HITS.pool.root.1
[2025-12-08 22:18:56] -rw------- 1 root root  10895360 Dec  8 22:18 result.tar.gz
22:18:57 (3956760): run_atlas exited; CPU time 133135.153647
22:18:57 (3956760): called boinc_finish(0)

</stderr_txt>
]]>

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