Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
18:14:33 (3041840): wrapper (7.7.26015): starting
18:14:33 (3041840): wrapper: running run_atlas (--nthreads 10)
[2025-12-07 18:14:33] Arguments: --nthreads 10
[2025-12-07 18:14:33] Threads: 10
[2025-12-07 18:14:33] Checking for CVMFS
[2025-12-07 18:14:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-07 18:14:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-07 18:14:33] Running cvmfs_config stat atlas.cern.ch
[2025-12-07 18:14:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-07 18:14:33] 2.13.3.0 11319 2110 74864 153748 1 273 4042240 4096000 10800 130560 0 303229478 100.000 74312 617 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-12-07 18:14:33] CVMFS is ok
[2025-12-07 18:14:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-07 18:14:33] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-07 18:14:33] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-07 18:14:33] Further information can be found at the LHC@home message board.
[2025-12-07 18:14:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-07 18:14:33] Checking for apptainer binary...
[2025-12-07 18:14:33] apptainer is not installed, using version from CVMFS
[2025-12-07 18:14:33] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-07 18:14:33] 7950x-linux
[2025-12-07 18:14:33] apptainer works
[2025-12-07 18:14:33] Set ATHENA_PROC_NUMBER=10
[2025-12-07 18:14:33] Set ATHENA_CORE_NUMBER=10
[2025-12-07 18:14:33] Starting ATLAS job with PandaID=6895369817
[2025-12-07 18:14:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc534/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-08 11:22:36]  *** The last 200 lines of the pilot log: ***
[2025-12-08 11:22:36] 2025-12-08 19:21:29,474 | INFO     | monitor loop #4464: job 0:6895369817 is in state 'finished'
[2025-12-08 11:22:36] 2025-12-08 19:21:29,474 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-08 11:22:36] 2025-12-08 19:21:30,191 | INFO     | time since job start (61604s) is within the limit (172800.0s)
[2025-12-08 11:22:36] 2025-12-08 19:21:30,564 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-08 11:22:36] 2025-12-08 19:21:30,567 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3999.9895937499996
[2025-12-08 11:22:36] 2025-12-08 19:21:30,571 | INFO     | using path: /var/lib/multiboinc/boinc534/slots/2/PanDA_Pilot-6895369817/memory_monitor_summary.json (trf name=prmon)
[2025-12-08 11:22:36] 2025-12-08 19:21:30,571 | INFO     | extracted standard info from prmon json
[2025-12-08 11:22:36] 2025-12-08 19:21:30,571 | INFO     | extracted standard memory fields from prmon json
[2025-12-08 11:22:36] 2025-12-08 19:21:30,571 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-08 11:22:36] 2025-12-08 19:21:30,579 | INFO     | fitting pss+swap vs Time
[2025-12-08 11:22:36] 2025-12-08 19:21:30,579 | INFO     | sum of square deviations: 319479005478.4906
[2025-12-08 11:22:36] 2025-12-08 19:21:30,591 | INFO     | sum of deviations: 1998258552203.6025
[2025-12-08 11:22:36] 2025-12-08 19:21:30,591 | INFO     | mean x: 1765190889.5029702
[2025-12-08 11:22:36] 2025-12-08 19:21:30,591 | INFO     | mean y: 3164889.6326732673
[2025-12-08 11:22:36] 2025-12-08 19:21:30,591 | INFO     | intersect: -11037647591.732946
[2025-12-08 11:22:36] 2025-12-08 19:21:30,591 | INFO     | chi2: 5.256942449572669
[2025-12-08 11:22:36] 2025-12-08 19:21:30,592 | INFO     | sum of square deviations: 314757717870.9916
[2025-12-08 11:22:36] 2025-12-08 19:21:30,607 | INFO     | sum of deviations: 2337249830007.772
[2025-12-08 11:22:36] 2025-12-08 19:21:30,607 | INFO     | mean x: 1765190737.002985
[2025-12-08 11:22:36] 2025-12-08 19:21:30,607 | INFO     | mean y: 3175831.743283582
[2025-12-08 11:22:36] 2025-12-08 19:21:30,607 | INFO     | intersect: -13104339935.932032
[2025-12-08 11:22:36] 2025-12-08 19:21:30,608 | INFO     | chi2: 2.4693033629658023
[2025-12-08 11:22:36] 2025-12-08 19:21:30,608 | INFO     | current chi2=2.4693033629658023 (change=53.0277649669433 %)
[2025-12-08 11:22:36] 2025-12-08 19:21:30,608 | INFO     | sum of square deviations: 310083175325.9911
[2025-12-08 11:22:36] 2025-12-08 19:21:30,619 | INFO     | sum of deviations: 2443528301238.429
[2025-12-08 11:22:36] 2025-12-08 19:21:30,620 | INFO     | mean x: 1765190584.503
[2025-12-08 11:22:36] 2025-12-08 19:21:30,620 | INFO     | mean y: 3179295.023
[2025-12-08 11:22:36] 2025-12-08 19:21:30,620 | INFO     | intersect: -13906937388.276928
[2025-12-08 11:22:36] 2025-12-08 19:21:30,620 | INFO     | chi2: 2.059949221803502
[2025-12-08 11:22:36] 2025-12-08 19:21:30,620 | INFO     | current chi2=2.059949221803502 (change=16.577717719974196 %)
[2025-12-08 11:22:36] 2025-12-08 19:21:30,620 | INFO     | right removable region: 999
[2025-12-08 11:22:36] 2025-12-08 19:21:30,621 | INFO     | sum of square deviations: 314757716040.9917
[2025-12-08 11:22:36] 2025-12-08 19:21:30,635 | INFO     | sum of deviations: 1736397131356.5166
[2025-12-08 11:22:36] 2025-12-08 19:21:30,639 | INFO     | mean x: 1765191042.002985
[2025-12-08 11:22:36] 2025-12-08 19:21:30,639 | INFO     | mean y: 3173334.4955223883
[2025-12-08 11:22:36] 2025-12-08 19:21:30,639 | INFO     | intersect: -9734706010.23524
[2025-12-08 11:22:36] 2025-12-08 19:21:30,639 | INFO     | chi2: 3.431777976582915
[2025-12-08 11:22:36] 2025-12-08 19:21:30,639 | INFO     | current chi2=3.431777976582915 (change=34.71912600333146 %)
[2025-12-08 11:22:36] 2025-12-08 19:21:30,640 | INFO     | sum of square deviations: 310083171665.991
[2025-12-08 11:22:36] 2025-12-08 19:21:30,651 | INFO     | sum of deviations: 1659754865217.8994
[2025-12-08 11:22:36] 2025-12-08 19:21:30,651 | INFO     | mean x: 1765191194.503
[2025-12-08 11:22:36] 2025-12-08 19:21:30,651 | INFO     | mean y: 3175834.201
[2025-12-08 11:22:36] 2025-12-08 19:21:30,651 | INFO     | intersect: -9445207505.582413
[2025-12-08 11:22:36] 2025-12-08 19:21:30,651 | INFO     | chi2: 3.376274358329185
[2025-12-08 11:22:36] 2025-12-08 19:21:30,652 | INFO     | current chi2=3.376274358329185 (change=1.6173429234776964 %)
[2025-12-08 11:22:36] 2025-12-08 19:21:30,652 | INFO     | left removable region: 20
[2025-12-08 11:22:36] 2025-12-08 19:21:30,652 | INFO     | sum of square deviations: 290955296928.9908
[2025-12-08 11:22:36] 2025-12-08 19:21:30,669 | INFO     | sum of deviations: 2003275567100.371
[2025-12-08 11:22:36] 2025-12-08 19:21:30,672 | INFO     | mean x: 1765191164.0030644
[2025-12-08 11:22:36] 2025-12-08 19:21:30,672 | INFO     | mean y: 3193959.2093973444
[2025-12-08 11:22:36] 2025-12-08 19:21:30,672 | INFO     | intersect: -12150440524.963005
[2025-12-08 11:22:36] 2025-12-08 19:21:30,672 | INFO     | chi2: 0.14322598599952585
[2025-12-08 11:22:36] 2025-12-08 19:21:30,672 | INFO     | current memory leak: 6.89 B/s (using 979 data points, chi2=0.14)
[2025-12-08 11:22:36] 2025-12-08 19:21:30,673 | INFO     | could have reported an average CPU frequency of 3999 MHz (38 samples)
[2025-12-08 11:22:36] 2025-12-08 19:21:30,673 | INFO     | ..............................
[2025-12-08 11:22:36] 2025-12-08 19:21:30,673 | INFO     | . Timing measurements:
[2025-12-08 11:22:36] 2025-12-08 19:21:30,673 | INFO     | . get job = 0 s
[2025-12-08 11:22:36] 2025-12-08 19:21:30,673 | INFO     | . initial setup = 3 s
[2025-12-08 11:22:36] 2025-12-08 19:21:30,673 | INFO     | . payload setup = 6 s
[2025-12-08 11:22:36] 2025-12-08 19:21:30,673 | INFO     | . stage-in = 0 s
[2025-12-08 11:22:36] 2025-12-08 19:21:30,673 | INFO     | . payload execution = 61561 s
[2025-12-08 11:22:36] 2025-12-08 19:21:30,673 | INFO     | . stage-out = 3 s
[2025-12-08 11:22:36] 2025-12-08 19:21:30,673 | INFO     | . log creation = 0 s
[2025-12-08 11:22:36] 2025-12-08 19:21:30,673 | INFO     | ..............................
[2025-12-08 11:22:36] 2025-12-08 19:21:31,209 | INFO     | 
[2025-12-08 11:22:36] 2025-12-08 19:21:31,209 | INFO     | job summary report
[2025-12-08 11:22:36] 2025-12-08 19:21:31,209 | INFO     | --------------------------------------------------
[2025-12-08 11:22:36] 2025-12-08 19:21:31,209 | INFO     | PanDA job id: 6895369817
[2025-12-08 11:22:36] 2025-12-08 19:21:31,209 | INFO     | task id: 47556137
[2025-12-08 11:22:36] 2025-12-08 19:21:31,209 | INFO     | errors: (none)
[2025-12-08 11:22:36] 2025-12-08 19:21:31,209 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-08 11:22:36] 2025-12-08 19:21:31,209 | INFO     | pilot state: finished 
[2025-12-08 11:22:36] 2025-12-08 19:21:31,209 | INFO     | transexitcode: 0
[2025-12-08 11:22:36] 2025-12-08 19:21:31,209 | INFO     | exeerrorcode: 0
[2025-12-08 11:22:36] 2025-12-08 19:21:31,209 | INFO     | exeerrordiag: 
[2025-12-08 11:22:36] 2025-12-08 19:21:31,209 | INFO     | exitcode: 0
[2025-12-08 11:22:36] 2025-12-08 19:21:31,209 | INFO     | exitmsg: OK
[2025-12-08 11:22:36] 2025-12-08 19:21:31,209 | INFO     | cpuconsumptiontime: 138285 s
[2025-12-08 11:22:36] 2025-12-08 19:21:31,209 | INFO     | nevents: 1000
[2025-12-08 11:22:36] 2025-12-08 19:21:31,209 | INFO     | neventsw: 0
[2025-12-08 11:22:36] 2025-12-08 19:21:31,209 | INFO     | pid: 3052366
[2025-12-08 11:22:36] 2025-12-08 19:21:31,209 | INFO     | pgrp: 3052366
[2025-12-08 11:22:36] 2025-12-08 19:21:31,209 | INFO     | corecount: 10
[2025-12-08 11:22:36] 2025-12-08 19:21:31,209 | INFO     | event service: False
[2025-12-08 11:22:36] 2025-12-08 19:21:31,209 | INFO     | sizes: {0: 2284101, 1: 2284356, 6: 2284618, 12: 2284646, 61571: 2337662, 61575: 2346868, 61588: 2347082}
[2025-12-08 11:22:36] 2025-12-08 19:21:31,209 | INFO     | --------------------------------------------------
[2025-12-08 11:22:36] 2025-12-08 19:21:31,210 | INFO     | 
[2025-12-08 11:22:36] 2025-12-08 19:21:31,210 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc534/slots/2
[2025-12-08 11:22:36] 2025-12-08 19:21:31,263 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-08 11:22:36] 2025-12-08 19:21:31,263 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-08 11:22:36] 2025-12-08 19:21:31,263 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-08 11:22:36] 2025-12-08 19:21:31,264 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-08 11:22:36] 2025-12-08 19:21:31,264 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-08 11:22:36] 2025-12-08 19:21:31,264 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-08 11:22:36] 2025-12-08 19:21:31,264 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-08 11:22:36] 2025-12-08 19:21:31,264 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-08 11:22:36] 2025-12-08 19:21:31,264 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-08 11:22:36] 2025-12-08 19:21:31,264 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-08 11:22:36] 2025-12-08 19:21:31,264 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-08 11:22:36] 2025-12-08 19:21:31,264 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-08 11:22:36] 2025-12-08 19:21:31,264 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-08 11:22:36] 2025-12-08 19:21:31,264 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-08 11:22:36] 2025-12-08 19:21:31,264 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-08 11:22:36] 2025-12-08 19:21:31,264 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-08 11:22:36] 2025-12-08 19:21:31,264 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-08 11:22:36] 2025-12-08 19:21:31,264 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-08 11:22:36] 2025-12-08 19:21:31,264 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-08 11:22:36] 2025-12-08 19:21:31,264 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-08 11:22:36] 2025-12-08 19:21:31,264 | INFO     | job 6895369817 has completed (purged errors)
[2025-12-08 11:22:36] 2025-12-08 19:21:31,264 | INFO     | overall cleanup function is called
[2025-12-08 11:22:36] 2025-12-08 19:21:32,287 | INFO     | --- collectZombieJob: --- 10, [3052366]
[2025-12-08 11:22:36] 2025-12-08 19:21:32,287 | INFO     | zombie collector waiting for pid 3052366
[2025-12-08 11:22:36] 2025-12-08 19:21:32,287 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-08 11:22:36] 2025-12-08 19:21:32,287 | INFO     | collected zombie processes
[2025-12-08 11:22:36] 2025-12-08 19:21:32,287 | INFO     | will attempt to kill all subprocesses of pid=3052366
[2025-12-08 11:22:36] 2025-12-08 19:21:32,651 | INFO     | process IDs to be killed: [3052366] (in reverse order)
[2025-12-08 11:22:36] 2025-12-08 19:21:32,789 | WARNING  | found no corresponding commands to process id(s)
[2025-12-08 11:22:36] 2025-12-08 19:21:32,789 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-08 11:22:36] 2025-12-08 19:21:32,796 | INFO     | did not find any defunct processes belonging to 3052366
[2025-12-08 11:22:36] 2025-12-08 19:21:32,802 | INFO     | did not find any defunct processes belonging to 3052366
[2025-12-08 11:22:36] 2025-12-08 19:21:32,803 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-08 11:22:36] 2025-12-08 19:21:32,803 | INFO     | ready for new job
[2025-12-08 11:22:36] 2025-12-08 19:21:32,803 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-08 11:22:36] 2025-12-08 19:21:32,809 | INFO     | ***************************************
[2025-12-08 11:22:36] 2025-12-08 19:21:32,809 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-08 11:22:36] 2025-12-08 19:21:32,809 | INFO     | ***************************************
[2025-12-08 11:22:36] 2025-12-08 19:21:32,809 | INFO     | 
[2025-12-08 11:22:36] 2025-12-08 19:21:32,810 | INFO     | architecture information:
[2025-12-08 11:22:36] 2025-12-08 19:21:32,810 | INFO     | executing command: cat /etc/os-release
[2025-12-08 11:22:36] 2025-12-08 19:21:32,824 | INFO     | cat /etc/os-release:
[2025-12-08 11:22:36] NAME="CentOS Linux"
[2025-12-08 11:22:36] VERSION="7 (Core)"
[2025-12-08 11:22:36] ID="centos"
[2025-12-08 11:22:36] ID_LIKE="rhel fedora"
[2025-12-08 11:22:36] VERSION_ID="7"
[2025-12-08 11:22:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-08 11:22:36] ANSI_COLOR="0;31"
[2025-12-08 11:22:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-08 11:22:36] HOME_URL="https://www.centos.org/"
[2025-12-08 11:22:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-08 11:22:36] 
[2025-12-08 11:22:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-08 11:22:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-08 11:22:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-08 11:22:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-08 11:22:36] 
[2025-12-08 11:22:36] 2025-12-08 19:21:32,825 | INFO     | ***************************************
[2025-12-08 11:22:36] 2025-12-08 19:21:33,327 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc534/slots/2
[2025-12-08 11:22:36] 2025-12-08 19:21:33,345 | INFO     | sufficient remaining disk space (169125871616 B)
[2025-12-08 11:22:36] 2025-12-08 19:21:33,345 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-08 11:22:36] 2025-12-08 19:21:33,345 | INFO     | current server update state: UPDATING_FINAL
[2025-12-08 11:22:36] 2025-12-08 19:21:33,345 | INFO     | update_server=False
[2025-12-08 11:22:36] 2025-12-08 19:21:33,346 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-08 11:22:36] 2025-12-08 19:21:33,346 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-08 11:22:36] 2025-12-08 19:21:33,346 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-08 11:22:36] 2025-12-08 19:21:33,346 | INFO     | aborting loop
[2025-12-08 11:22:36] 2025-12-08 19:21:33,346 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-08 11:22:36] 2025-12-08 19:21:33,472 | INFO     | all payload control threads have been joined
[2025-12-08 11:22:36] 2025-12-08 19:21:33,774 | INFO     | all data control threads have been joined
[2025-12-08 11:22:36] 2025-12-08 19:21:34,351 | INFO     | [job] retrieve thread has finished
[2025-12-08 11:22:36] 2025-12-08 19:21:34,351 | INFO     | [job] job monitor thread has finished
[2025-12-08 11:22:36] 2025-12-08 19:21:34,477 | INFO     | [payload] control thread has finished
[2025-12-08 11:22:36] 2025-12-08 19:21:34,659 | INFO     | [payload] failed_post thread has finished
[2025-12-08 11:22:36] 2025-12-08 19:21:34,663 | INFO     | all job control threads have been joined
[2025-12-08 11:22:36] 2025-12-08 19:21:34,688 | INFO     | [data] copytool_in thread has finished
[2025-12-08 11:22:36] 2025-12-08 19:21:34,779 | INFO     | [data] control thread has finished
[2025-12-08 11:22:36] 2025-12-08 19:21:35,063 | INFO     | [job] validate thread has finished
[2025-12-08 11:22:36] 2025-12-08 19:21:35,351 | INFO     | [data] copytool_out thread has finished
[2025-12-08 11:22:36] 2025-12-08 19:21:35,423 | INFO     | [payload] validate_pre thread has finished
[2025-12-08 11:22:36] 2025-12-08 19:21:35,445 | INFO     | [job] create_data_payload thread has finished
[2025-12-08 11:22:36] 2025-12-08 19:21:35,478 | INFO     | [payload] execute_payloads thread has finished
[2025-12-08 11:22:36] 2025-12-08 19:21:35,538 | INFO     | [payload] validate_post thread has finished
[2025-12-08 11:22:36] 2025-12-08 19:21:35,668 | INFO     | [job] control thread has finished
[2025-12-08 11:22:36] 2025-12-08 19:21:35,735 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-08 11:22:36] 2025-12-08 19:21:35,832 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-08 11:22:36] 2025-12-08 19:21:36,740 | INFO     | [job] queue monitor thread has finished
[2025-12-08 11:22:36] 2025-12-08 19:21:37,351 | INFO     | [data] queue_monitor thread has finished
[2025-12-08 11:22:36] 2025-12-08 19:22:03,584 | INFO     | PID=3045677 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-08 11:22:36] 2025-12-08 19:22:03,585 | INFO     | .. there are 14 such processes running
[2025-12-08 11:22:36] 2025-12-08 19:22:03,585 | INFO     | found 0 job(s) in 20 queues
[2025-12-08 11:22:36] 2025-12-08 19:22:03,585 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-08 11:22:36] 2025-12-08 19:22:03,585 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-08 11:22:36] 2025-12-08 19:22:29,095 | INFO     | [monitor] cgroup control has ended
[2025-12-08 11:22:36] 2025-12-08 19:22:30,912 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125911167829824)>', '<ExcThread(monitor, started 125910808237824)>']
[2025-12-08 11:22:36] 2025-12-08 19:22:31,729 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-08 11:22:36] 2025-12-08 19:22:31,729 | INFO     | [monitor] control thread has ended
[2025-12-08 11:22:36] 2025-12-08 19:22:35,937 | INFO     | all workflow threads have been joined
[2025-12-08 11:22:36] 2025-12-08 19:22:35,937 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-08 11:22:36] 2025-12-08 19:22:35,937 | INFO     | traces error code: 0
[2025-12-08 11:22:36] 2025-12-08 19:22:35,937 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-08 11:22:36] 2025-12-08 19:22:36,037 [wrapper] ==== pilot stdout END ====
[2025-12-08 11:22:36] 2025-12-08 19:22:36,040 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-08 11:22:36] 2025-12-08 19:22:36,041 [wrapper] pilotpid: 3045677
[2025-12-08 11:22:36] 2025-12-08 19:22:36,043 [wrapper] Pilot exit status: 0
[2025-12-08 11:22:36] 2025-12-08 19:22:36,051 [wrapper] pandaids: 6895369817
[2025-12-08 11:22:36] 2025-12-08 19:22:36,098 [wrapper] cleanup supervisor_pilot  232132 3045678
[2025-12-08 11:22:36] 2025-12-08 19:22:36,102 [wrapper] Test setup, not cleaning
[2025-12-08 11:22:36] 2025-12-08 19:22:36,104 [wrapper] apfmon messages muted
[2025-12-08 11:22:36] 2025-12-08 19:22:36,106 [wrapper] ==== wrapper stdout END ====
[2025-12-08 11:22:36] 2025-12-08 19:22:36,107 [wrapper] ==== wrapper stderr END ====
[2025-12-08 11:22:36]  *** Error codes and diagnostics ***
[2025-12-08 11:22:36]     "exeErrorCode": 0,
[2025-12-08 11:22:36]     "exeErrorDiag": "",
[2025-12-08 11:22:36]     "pilotErrorCode": 0,
[2025-12-08 11:22:36]     "pilotErrorDiag": "",
[2025-12-08 11:22:36]  *** Listing of results directory ***
[2025-12-08 11:22:36] total 1329320
[2025-12-08 11:22:36] -rw-r--r-- 1 root root    576529 Nov 23 12:16 pilot3.tar.gz
[2025-12-08 11:22:36] -rw-r--r-- 1 root root      5112 Nov 23 12:27 queuedata.json
[2025-12-08 11:22:36] -rwx------ 1 4871 1028     36292 Nov 23 12:27 runpilot2-wrapper.sh
[2025-12-08 11:22:36] -rw-r--r-- 1 root root       100 Dec  7 18:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-08 11:22:36] -rwxr-xr-x 1 root root      7986 Dec  7 18:14 run_atlas
[2025-12-08 11:22:36] -rw-r--r-- 1 root root       105 Dec  7 18:14 job.xml
[2025-12-08 11:22:36] -rw-r--r-- 1 root root      9523 Dec  7 18:14 init_data.xml
[2025-12-08 11:22:36] -rw-r--r-- 2 root root 408854092 Dec  7 18:14 EVNT.47483658._000889.pool.root.1
[2025-12-08 11:22:36] -rw-r--r-- 2 root root     15847 Dec  7 18:14 start_atlas.sh
[2025-12-08 11:22:36] drwxrwx--x 2 root root      4096 Dec  7 18:14 shared
[2025-12-08 11:22:36] -rw-r--r-- 2 root root    590102 Dec  7 18:14 input.tar.gz
[2025-12-08 11:22:36] -rw-r--r-- 1 root root         0 Dec  7 18:14 boinc_lockfile
[2025-12-08 11:22:36] -rw-r--r-- 1 root root      2785 Dec  7 18:14 pandaJob.out
[2025-12-08 11:22:36] -rw------- 1 root root    981509 Dec  7 18:14 agis_schedconf.cvmfs.json
[2025-12-08 11:22:36] drwxr-xr-x 5  320  320      4096 Dec  7 18:14 pilot3
[2025-12-08 11:22:36] -rw-r--r-- 1 root root       533 Dec  8 11:10 boinc_task_state.xml
[2025-12-08 11:22:36] -rw------- 1 root root 926216625 Dec  8 11:20 HITS.47556137._008760.pool.root.1
[2025-12-08 11:22:36] -rw------- 1 root root      1056 Dec  8 11:21 memory_monitor_summary.json
[2025-12-08 11:22:36] -rw------- 1 root root        95 Dec  8 11:21 pilot_heartbeat.json
[2025-12-08 11:22:36] -rw------- 1 root root   1516240 Dec  8 11:21 agis_ddmendpoints.agis.ALL.json
[2025-12-08 11:22:36] -rw------- 1 root root   2366150 Dec  8 11:21 log.47556137._008760.job.log.tgz.1
[2025-12-08 11:22:36] -rw------- 1 root root      8612 Dec  8 11:21 heartbeat.json
[2025-12-08 11:22:36] -rw-r--r-- 1 root root        29 Dec  8 11:22 wrapper_checkpoint.txt
[2025-12-08 11:22:36] -rw-r--r-- 1 root root      8192 Dec  8 11:22 boinc_mmap_file
[2025-12-08 11:22:36] -rw------- 1 root root      4839 Dec  8 11:22 pilotlog.txt
[2025-12-08 11:22:36] -rw------- 1 root root   8753951 Dec  8 11:22 log.47556137._008760.job.log.1
[2025-12-08 11:22:36] -rw------- 1 root root       353 Dec  8 11:22 output.list
[2025-12-08 11:22:36] -rw-r--r-- 1 root root       620 Dec  8 11:22 runtime_log
[2025-12-08 11:22:36] -rw------- 1 root root  11141120 Dec  8 11:22 result.tar.gz
[2025-12-08 11:22:36] -rw-r--r-- 1 root root      9021 Dec  8 11:22 runtime_log.err
[2025-12-08 11:22:36] -rw------- 1 root root       663 Dec  8 11:22 jVPODmlrVh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmXBLKDmKoeFMn.diag
[2025-12-08 11:22:36] -rw-r--r-- 1 root root     21438 Dec  8 11:22 stderr.txt
[2025-12-08 11:22:36] HITS file was successfully produced:
[2025-12-08 11:22:36] -rw------- 1 root root 926216625 Dec  8 11:20 shared/HITS.pool.root.1
[2025-12-08 11:22:36]  *** Contents of shared directory: ***
[2025-12-08 11:22:36] total 1315268
[2025-12-08 11:22:36] -rw-r--r-- 2 root root 408854092 Dec  7 18:14 ATLAS.root_0
[2025-12-08 11:22:36] -rw-r--r-- 2 root root     15847 Dec  7 18:14 start_atlas.sh
[2025-12-08 11:22:36] -rw-r--r-- 2 root root    590102 Dec  7 18:14 input.tar.gz
[2025-12-08 11:22:36] -rw------- 1 root root 926216625 Dec  8 11:20 HITS.pool.root.1
[2025-12-08 11:22:36] -rw------- 1 root root  11141120 Dec  8 11:22 result.tar.gz
11:22:37 (3041840): run_atlas exited; CPU time 138375.617034
11:22:37 (3041840): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN