Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:43:37 (1308501): wrapper (7.7.26015): starting
11:43:37 (1308501): wrapper: running run_atlas (--nthreads 3)
[2025-12-05 11:43:37] Arguments: --nthreads 3
[2025-12-05 11:43:37] Threads: 3
[2025-12-05 11:43:37] Checking for CVMFS
[2025-12-05 11:43:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-05 11:43:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-05 11:43:38] Running cvmfs_config stat atlas.cern.ch
[2025-12-05 11:43:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-05 11:43:38] 2.9.2.0 2027077 16020 103636 153648 3 68 21153394 36864001 0 130560 0 5997792 99.983 553738 902 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-05 11:43:38] CVMFS is ok
[2025-12-05 11:43:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-05 11:43:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-05 11:43:38] Further information can be found at the LHC@home message board.
[2025-12-05 11:43:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-05 11:43:38] Checking for apptainer binary...
[2025-12-05 11:43:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-05 11:43:38] Running /usr/bin/apptainer --version
[2025-12-05 11:43:38] apptainer version 1.4.1-1.1
[2025-12-05 11:43:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-05 11:43:38] legendA163
[2025-12-05 11:43:38] apptainer works
[2025-12-05 11:43:38] Set ATHENA_PROC_NUMBER=3
[2025-12-05 11:43:38] Set ATHENA_CORE_NUMBER=3
[2025-12-05 11:43:38] Starting ATLAS job with PandaID=6894287385
[2025-12-05 11:43:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-05 19:47:26]  *** The last 200 lines of the pilot log: ***
[2025-12-05 19:47:26] 2025-12-05 18:46:42,145 | INFO     | monitor loop #2202: job 0:6894287385 is in state 'finished'
[2025-12-05 19:47:26] 2025-12-05 18:46:42,145 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-05 19:47:26] 2025-12-05 18:46:42,657 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-05 19:47:26] 2025-12-05 18:46:42,658 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3538.3753333333334
[2025-12-05 19:47:26] 2025-12-05 18:46:42,659 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6894287385/memory_monitor_summary.json (trf name=prmon)
[2025-12-05 19:47:26] 2025-12-05 18:46:42,660 | INFO     | extracted standard info from prmon json
[2025-12-05 19:47:26] 2025-12-05 18:46:42,660 | INFO     | extracted standard memory fields from prmon json
[2025-12-05 19:47:26] 2025-12-05 18:46:42,660 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-05 19:47:26] 2025-12-05 18:46:42,663 | INFO     | fitting pss+swap vs Time
[2025-12-05 19:47:26] 2025-12-05 18:46:42,663 | INFO     | sum of square deviations: 33232064950.0
[2025-12-05 19:47:26] 2025-12-05 18:46:42,665 | INFO     | sum of deviations: 254563723921.99994
[2025-12-05 19:47:26] 2025-12-05 18:46:42,665 | INFO     | mean x: 1764945900.0
[2025-12-05 19:47:26] 2025-12-05 18:46:42,665 | INFO     | mean y: 2186787.5789473685
[2025-12-05 19:47:26] 2025-12-05 18:46:42,665 | INFO     | intersect: -13517623115.924076
[2025-12-05 19:47:26] 2025-12-05 18:46:42,665 | INFO     | chi2: 3.029093528523707
[2025-12-05 19:47:26] 2025-12-05 18:46:42,665 | INFO     | sum of square deviations: 32193636177.5
[2025-12-05 19:47:26] 2025-12-05 18:46:42,667 | INFO     | sum of deviations: 293710706758.99994
[2025-12-05 19:47:26] 2025-12-05 18:46:42,667 | INFO     | mean x: 1764945747.5
[2025-12-05 19:47:26] 2025-12-05 18:46:42,667 | INFO     | mean y: 2192498.9914893615
[2025-12-05 19:47:26] 2025-12-05 18:46:42,667 | INFO     | intersect: -16099855124.066776
[2025-12-05 19:47:26] 2025-12-05 18:46:42,667 | INFO     | chi2: 2.20202605715285
[2025-12-05 19:47:26] 2025-12-05 18:46:42,667 | INFO     | current chi2=2.20202605715285 (change=27.304124603044063 %)
[2025-12-05 19:47:26] 2025-12-05 18:46:42,667 | INFO     | sum of square deviations: 31177068280.0
[2025-12-05 19:47:26] 2025-12-05 18:46:42,669 | INFO     | sum of deviations: 288932096811.0
[2025-12-05 19:47:26] 2025-12-05 18:46:42,669 | INFO     | mean x: 1764945595.0
[2025-12-05 19:47:26] 2025-12-05 18:46:42,669 | INFO     | mean y: 2191782.0602150536
[2025-12-05 19:47:26] 2025-12-05 18:46:42,669 | INFO     | intersect: -16354363200.622972
[2025-12-05 19:47:26] 2025-12-05 18:46:42,669 | INFO     | chi2: 2.2002321760857915
[2025-12-05 19:47:26] 2025-12-05 18:46:42,669 | INFO     | current chi2=2.2002321760857915 (change=0.08146502450466048 %)
[2025-12-05 19:47:26] 2025-12-05 18:46:42,669 | INFO     | right removable region: 464
[2025-12-05 19:47:26] 2025-12-05 18:46:42,670 | INFO     | sum of square deviations: 32193636177.5
[2025-12-05 19:47:26] 2025-12-05 18:46:42,671 | INFO     | sum of deviations: 157622298313.50015
[2025-12-05 19:47:26] 2025-12-05 18:46:42,671 | INFO     | mean x: 1764946052.5
[2025-12-05 19:47:26] 2025-12-05 18:46:42,671 | INFO     | mean y: 2201002.4234042554
[2025-12-05 19:47:26] 2025-12-05 18:46:42,671 | INFO     | intersect: -8639098528.345932
[2025-12-05 19:47:26] 2025-12-05 18:46:42,672 | INFO     | chi2: 1.016557618073957
[2025-12-05 19:47:26] 2025-12-05 18:46:42,672 | INFO     | current chi2=1.016557618073957 (change=66.4402036945555 %)
[2025-12-05 19:47:26] 2025-12-05 18:46:42,672 | INFO     | sum of square deviations: 31177068280.0
[2025-12-05 19:47:26] 2025-12-05 18:46:42,674 | INFO     | sum of deviations: 136229209346.99998
[2025-12-05 19:47:26] 2025-12-05 18:46:42,674 | INFO     | mean x: 1764946205.0
[2025-12-05 19:47:26] 2025-12-05 18:46:42,674 | INFO     | mean y: 2204196.9032258065
[2025-12-05 19:47:26] 2025-12-05 18:46:42,674 | INFO     | intersect: -7709785393.900537
[2025-12-05 19:47:26] 2025-12-05 18:46:42,674 | INFO     | chi2: 0.8712239619809443
[2025-12-05 19:47:26] 2025-12-05 18:46:42,674 | INFO     | current chi2=0.8712239619809443 (change=14.29664718546621 %)
[2025-12-05 19:47:26] 2025-12-05 18:46:42,674 | INFO     | left removable region: 20
[2025-12-05 19:47:26] 2025-12-05 18:46:42,674 | INFO     | sum of square deviations: 27140955395.0
[2025-12-05 19:47:26] 2025-12-05 18:46:42,676 | INFO     | sum of deviations: 160774674186.5
[2025-12-05 19:47:26] 2025-12-05 18:46:42,676 | INFO     | mean x: 1764946174.5
[2025-12-05 19:47:26] 2025-12-05 18:46:42,676 | INFO     | mean y: 2211330.885135135
[2025-12-05 19:47:26] 2025-12-05 18:46:42,676 | INFO     | intersect: -10452787103.481771
[2025-12-05 19:47:26] 2025-12-05 18:46:42,676 | INFO     | chi2: 0.03673802098164949
[2025-12-05 19:47:26] 2025-12-05 18:46:42,676 | INFO     | current memory leak: 5.92 B/s (using 444 data points, chi2=0.04)
[2025-12-05 19:47:26] 2025-12-05 18:46:42,677 | INFO     | could have reported an average CPU frequency of 3905 MHz (20 samples)
[2025-12-05 19:47:26] 2025-12-05 18:46:42,677 | INFO     | ..............................
[2025-12-05 19:47:26] 2025-12-05 18:46:42,677 | INFO     | . Timing measurements:
[2025-12-05 19:47:26] 2025-12-05 18:46:42,677 | INFO     | . get job = 0 s
[2025-12-05 19:47:26] 2025-12-05 18:46:42,677 | INFO     | . initial setup = 1 s
[2025-12-05 19:47:26] 2025-12-05 18:46:42,677 | INFO     | . payload setup = 3 s
[2025-12-05 19:47:26] 2025-12-05 18:46:42,677 | INFO     | . stage-in = 0 s
[2025-12-05 19:47:26] 2025-12-05 18:46:42,677 | INFO     | . payload execution = 28949 s
[2025-12-05 19:47:26] 2025-12-05 18:46:42,677 | INFO     | . stage-out = 1 s
[2025-12-05 19:47:26] 2025-12-05 18:46:42,677 | INFO     | . log creation = 0 s
[2025-12-05 19:47:26] 2025-12-05 18:46:42,677 | INFO     | ..............................
[2025-12-05 19:47:26] 2025-12-05 18:46:42,707 | INFO     | 
[2025-12-05 19:47:26] 2025-12-05 18:46:42,707 | INFO     | job summary report
[2025-12-05 19:47:26] 2025-12-05 18:46:42,707 | INFO     | --------------------------------------------------
[2025-12-05 19:47:26] 2025-12-05 18:46:42,707 | INFO     | PanDA job id: 6894287385
[2025-12-05 19:47:26] 2025-12-05 18:46:42,707 | INFO     | task id: 47533967
[2025-12-05 19:47:26] 2025-12-05 18:46:42,707 | INFO     | errors: (none)
[2025-12-05 19:47:26] 2025-12-05 18:46:42,707 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-05 19:47:26] 2025-12-05 18:46:42,707 | INFO     | pilot state: finished 
[2025-12-05 19:47:26] 2025-12-05 18:46:42,707 | INFO     | transexitcode: 0
[2025-12-05 19:47:26] 2025-12-05 18:46:42,707 | INFO     | exeerrorcode: 0
[2025-12-05 19:47:26] 2025-12-05 18:46:42,707 | INFO     | exeerrordiag: 
[2025-12-05 19:47:26] 2025-12-05 18:46:42,707 | INFO     | exitcode: 0
[2025-12-05 19:47:26] 2025-12-05 18:46:42,707 | INFO     | exitmsg: OK
[2025-12-05 19:47:26] 2025-12-05 18:46:42,707 | INFO     | cpuconsumptiontime: 85614 s
[2025-12-05 19:47:26] 2025-12-05 18:46:42,707 | INFO     | nevents: 1000
[2025-12-05 19:47:26] 2025-12-05 18:46:42,707 | INFO     | neventsw: 0
[2025-12-05 19:47:26] 2025-12-05 18:46:42,707 | INFO     | pid: 1318680
[2025-12-05 19:47:26] 2025-12-05 18:46:42,707 | INFO     | pgrp: 1318680
[2025-12-05 19:47:26] 2025-12-05 18:46:42,707 | INFO     | corecount: 3
[2025-12-05 19:47:26] 2025-12-05 18:46:42,707 | INFO     | event service: False
[2025-12-05 19:47:26] 2025-12-05 18:46:42,707 | INFO     | sizes: {0: 2284318, 3: 2284580, 11: 2284608, 28956: 2323569, 28957: 2332569, 28961: 2332625, 28966: 2332999}
[2025-12-05 19:47:26] 2025-12-05 18:46:42,707 | INFO     | --------------------------------------------------
[2025-12-05 19:47:26] 2025-12-05 18:46:42,707 | INFO     | 
[2025-12-05 19:47:26] 2025-12-05 18:46:42,707 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-05 19:47:26] 2025-12-05 18:46:42,719 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-05 19:47:26] 2025-12-05 18:46:42,719 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-05 19:47:26] 2025-12-05 18:46:42,719 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-05 19:47:26] 2025-12-05 18:46:42,719 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-05 19:47:26] 2025-12-05 18:46:42,719 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-05 19:47:26] 2025-12-05 18:46:42,719 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-05 19:47:26] 2025-12-05 18:46:42,719 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-05 19:47:26] 2025-12-05 18:46:42,719 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-05 19:47:26] 2025-12-05 18:46:42,720 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-05 19:47:26] 2025-12-05 18:46:42,720 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-05 19:47:26] 2025-12-05 18:46:42,720 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-05 19:47:26] 2025-12-05 18:46:42,720 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-05 19:47:26] 2025-12-05 18:46:42,720 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-05 19:47:26] 2025-12-05 18:46:42,720 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-05 19:47:26] 2025-12-05 18:46:42,720 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-05 19:47:26] 2025-12-05 18:46:42,720 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-05 19:47:26] 2025-12-05 18:46:42,720 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-05 19:47:26] 2025-12-05 18:46:42,720 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-05 19:47:26] 2025-12-05 18:46:42,720 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-05 19:47:26] 2025-12-05 18:46:42,720 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-05 19:47:26] 2025-12-05 18:46:42,720 | INFO     | job 6894287385 has completed (purged errors)
[2025-12-05 19:47:26] 2025-12-05 18:46:42,720 | INFO     | overall cleanup function is called
[2025-12-05 19:47:26] 2025-12-05 18:46:43,728 | INFO     | --- collectZombieJob: --- 10, [1318680]
[2025-12-05 19:47:26] 2025-12-05 18:46:43,729 | INFO     | zombie collector waiting for pid 1318680
[2025-12-05 19:47:26] 2025-12-05 18:46:43,729 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-05 19:47:26] 2025-12-05 18:46:43,729 | INFO     | collected zombie processes
[2025-12-05 19:47:26] 2025-12-05 18:46:43,729 | INFO     | will attempt to kill all subprocesses of pid=1318680
[2025-12-05 19:47:26] 2025-12-05 18:46:43,784 | INFO     | process IDs to be killed: [1318680] (in reverse order)
[2025-12-05 19:47:26] 2025-12-05 18:46:43,812 | WARNING  | found no corresponding commands to process id(s)
[2025-12-05 19:47:26] 2025-12-05 18:46:43,812 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-05 19:47:26] 2025-12-05 18:46:43,814 | INFO     | did not find any defunct processes belonging to 1318680
[2025-12-05 19:47:26] 2025-12-05 18:46:43,815 | INFO     | did not find any defunct processes belonging to 1318680
[2025-12-05 19:47:26] 2025-12-05 18:46:43,816 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-05 19:47:26] 2025-12-05 18:46:43,816 | INFO     | ready for new job
[2025-12-05 19:47:26] 2025-12-05 18:46:43,816 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-05 19:47:26] 2025-12-05 18:46:43,817 | INFO     | ***************************************
[2025-12-05 19:47:26] 2025-12-05 18:46:43,817 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-05 19:47:26] 2025-12-05 18:46:43,817 | INFO     | ***************************************
[2025-12-05 19:47:26] 2025-12-05 18:46:43,817 | INFO     | 
[2025-12-05 19:47:26] 2025-12-05 18:46:43,817 | INFO     | architecture information:
[2025-12-05 19:47:26] 2025-12-05 18:46:43,818 | INFO     | executing command: cat /etc/os-release
[2025-12-05 19:47:26] 2025-12-05 18:46:43,827 | INFO     | cat /etc/os-release:
[2025-12-05 19:47:26] NAME="CentOS Linux"
[2025-12-05 19:47:26] VERSION="7 (Core)"
[2025-12-05 19:47:26] ID="centos"
[2025-12-05 19:47:26] ID_LIKE="rhel fedora"
[2025-12-05 19:47:26] VERSION_ID="7"
[2025-12-05 19:47:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-05 19:47:26] ANSI_COLOR="0;31"
[2025-12-05 19:47:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-05 19:47:26] HOME_URL="https://www.centos.org/"
[2025-12-05 19:47:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-05 19:47:26] 
[2025-12-05 19:47:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-05 19:47:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-05 19:47:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-05 19:47:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-05 19:47:26] 
[2025-12-05 19:47:26] 2025-12-05 18:46:43,827 | INFO     | ***************************************
[2025-12-05 19:47:26] 2025-12-05 18:46:44,330 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-05 19:47:26] 2025-12-05 18:46:44,341 | INFO     | sufficient remaining disk space (384313589760 B)
[2025-12-05 19:47:26] 2025-12-05 18:46:44,342 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-05 19:47:26] 2025-12-05 18:46:44,342 | INFO     | current server update state: UPDATING_FINAL
[2025-12-05 19:47:26] 2025-12-05 18:46:44,342 | INFO     | update_server=False
[2025-12-05 19:47:26] 2025-12-05 18:46:44,342 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-05 19:47:26] 2025-12-05 18:46:44,342 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-05 19:47:26] 2025-12-05 18:46:44,342 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-05 19:47:26] 2025-12-05 18:46:44,440 | INFO     | all job control threads have been joined
[2025-12-05 19:47:26] 2025-12-05 18:46:44,649 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-05 19:47:26] 2025-12-05 18:46:44,649 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-05 19:47:26] 2025-12-05 18:46:44,650 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-05 19:47:26] 2025-12-05 18:46:44,650 | INFO     | will abort loop
[2025-12-05 19:47:26] 2025-12-05 18:46:44,650 | INFO     | all payload control threads have been joined
[2025-12-05 19:47:26] 2025-12-05 18:46:44,910 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-05 19:47:26] 2025-12-05 18:46:45,243 | INFO     | all data control threads have been joined
[2025-12-05 19:47:26] 2025-12-05 18:46:45,347 | INFO     | [job] retrieve thread has finished
[2025-12-05 19:47:26] 2025-12-05 18:46:45,348 | INFO     | [job] queue monitor thread has finished
[2025-12-05 19:47:26] 2025-12-05 18:46:45,369 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-05 19:47:26] 2025-12-05 18:46:45,446 | INFO     | [job] control thread has finished
[2025-12-05 19:47:26] 2025-12-05 18:46:45,655 | INFO     | [job] job monitor thread has finished
[2025-12-05 19:47:26] 2025-12-05 18:46:45,655 | INFO     | [payload] control thread has finished
[2025-12-05 19:47:26] 2025-12-05 18:46:46,111 | INFO     | [payload] execute_payloads thread has finished
[2025-12-05 19:47:26] 2025-12-05 18:46:46,242 | INFO     | [data] copytool_in thread has finished
[2025-12-05 19:47:26] 2025-12-05 18:46:46,248 | INFO     | [data] control thread has finished
[2025-12-05 19:47:26] 2025-12-05 18:46:46,416 | INFO     | [job] create_data_payload thread has finished
[2025-12-05 19:47:26] 2025-12-05 18:46:46,433 | INFO     | [payload] failed_post thread has finished
[2025-12-05 19:47:26] 2025-12-05 18:46:46,440 | INFO     | [payload] validate_pre thread has finished
[2025-12-05 19:47:26] 2025-12-05 18:46:46,466 | INFO     | [job] validate thread has finished
[2025-12-05 19:47:26] 2025-12-05 18:46:46,916 | INFO     | [data] copytool_out thread has finished
[2025-12-05 19:47:26] 2025-12-05 18:46:46,945 | INFO     | [payload] validate_post thread has finished
[2025-12-05 19:47:26] 2025-12-05 18:46:48,349 | INFO     | [data] queue_monitor thread has finished
[2025-12-05 19:47:26] 2025-12-05 18:47:14,959 | INFO     | PID=1312228 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-05 19:47:26] 2025-12-05 18:47:14,959 | INFO     | found 0 job(s) in 20 queues
[2025-12-05 19:47:26] 2025-12-05 18:47:14,959 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-05 19:47:26] 2025-12-05 18:47:14,959 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-05 19:47:26] 2025-12-05 18:47:18,801 | INFO     | [monitor] cgroup control has ended
[2025-12-05 19:47:26] 2025-12-05 18:47:20,852 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140576277702464)>', '<ExcThread(monitor, started 140575487555328)>']
[2025-12-05 19:47:26] 2025-12-05 18:47:20,991 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-05 19:47:26] 2025-12-05 18:47:20,992 | INFO     | [monitor] control thread has ended
[2025-12-05 19:47:26] 2025-12-05 18:47:25,878 | INFO     | all workflow threads have been joined
[2025-12-05 19:47:26] 2025-12-05 18:47:25,878 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-05 19:47:26] 2025-12-05 18:47:25,878 | INFO     | traces error code: 0
[2025-12-05 19:47:26] 2025-12-05 18:47:25,878 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-05 19:47:26] 2025-12-05 18:47:25,930 [wrapper] ==== pilot stdout END ====
[2025-12-05 19:47:26] 2025-12-05 18:47:25,933 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-05 19:47:26] 2025-12-05 18:47:25,935 [wrapper] pilotpid: 1312228
[2025-12-05 19:47:26] 2025-12-05 18:47:25,938 [wrapper] Pilot exit status: 0
[2025-12-05 19:47:26] 2025-12-05 18:47:25,945 [wrapper] pandaids: 6894287385
[2025-12-05 19:47:26] 2025-12-05 18:47:25,963 [wrapper] cleanup supervisor_pilot 1389397 1312229
[2025-12-05 19:47:26] 2025-12-05 18:47:25,966 [wrapper] Test setup, not cleaning
[2025-12-05 19:47:26] 2025-12-05 18:47:25,968 [wrapper] apfmon messages muted
[2025-12-05 19:47:26] 2025-12-05 18:47:25,970 [wrapper] ==== wrapper stdout END ====
[2025-12-05 19:47:26] 2025-12-05 18:47:25,973 [wrapper] ==== wrapper stderr END ====
[2025-12-05 19:47:26]  *** Error codes and diagnostics ***
[2025-12-05 19:47:26]     "exeErrorCode": 0,
[2025-12-05 19:47:26]     "exeErrorDiag": "",
[2025-12-05 19:47:26]     "pilotErrorCode": 0,
[2025-12-05 19:47:26]     "pilotErrorDiag": "",
[2025-12-05 19:47:26]  *** Listing of results directory ***
[2025-12-05 19:47:26] total 1296188
[2025-12-05 19:47:26] -rw-r--r-- 1 boinc boinc    576529 Nov 21 11:50 pilot3.tar.gz
[2025-12-05 19:47:26] -rwx------ 1 boinc boinc     36292 Nov 21 11:51 runpilot2-wrapper.sh
[2025-12-05 19:47:26] -rw-r--r-- 1 boinc boinc      5112 Nov 21 11:51 queuedata.json
[2025-12-05 19:47:26] -rw-r--r-- 1 boinc boinc       100 Dec  5 11:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-05 19:47:26] -rwxr-xr-x 1 boinc boinc      7986 Dec  5 11:43 run_atlas
[2025-12-05 19:47:26] -rw-r--r-- 1 boinc boinc       105 Dec  5 11:43 job.xml
[2025-12-05 19:47:26] -rw-r--r-- 2 boinc boinc 407826127 Dec  5 11:43 EVNT.47493127._002378.pool.root.1
[2025-12-05 19:47:26] drwxrwx--x 2 boinc boinc      4096 Dec  5 11:43 shared
[2025-12-05 19:47:26] -rw-r--r-- 2 boinc boinc    590097 Dec  5 11:43 input.tar.gz
[2025-12-05 19:47:26] -rw-r--r-- 2 boinc boinc     15847 Dec  5 11:43 start_atlas.sh
[2025-12-05 19:47:26] -rw-r--r-- 1 boinc boinc         0 Dec  5 11:43 boinc_setup_complete
[2025-12-05 19:47:26] -rw-r--r-- 1 boinc boinc      6451 Dec  5 11:43 init_data.xml
[2025-12-05 19:47:26] -rw-r--r-- 1 boinc boinc         0 Dec  5 11:43 boinc_lockfile
[2025-12-05 19:47:26] -rw-r--r-- 1 boinc boinc      2786 Dec  5 11:43 pandaJob.out
[2025-12-05 19:47:26] -rw------- 1 boinc boinc    985499 Dec  5 11:43 agis_schedconf.cvmfs.json
[2025-12-05 19:47:26] drwx------ 5 boinc boinc      4096 Dec  5 11:43 pilot3
[2025-12-05 19:47:26] -rw-r--r-- 1 boinc boinc       531 Dec  5 19:43 boinc_task_state.xml
[2025-12-05 19:47:26] -rw------- 1 boinc boinc 905065938 Dec  5 19:46 HITS.47533967._003499.pool.root.1
[2025-12-05 19:47:26] -rw------- 1 boinc boinc      1024 Dec  5 19:46 memory_monitor_summary.json
[2025-12-05 19:47:26] -rw------- 1 boinc boinc        95 Dec  5 19:46 pilot_heartbeat.json
[2025-12-05 19:47:26] -rw------- 1 boinc boinc   1516240 Dec  5 19:46 agis_ddmendpoints.agis.ALL.json
[2025-12-05 19:47:26] -rw------- 1 boinc boinc   1172133 Dec  5 19:46 log.47533967._003499.job.log.tgz.1
[2025-12-05 19:47:26] -rw------- 1 boinc boinc      8563 Dec  5 19:46 heartbeat.json
[2025-12-05 19:47:26] -rw-r--r-- 1 boinc boinc      8192 Dec  5 19:47 boinc_mmap_file
[2025-12-05 19:47:26] -rw-r--r-- 1 boinc boinc        28 Dec  5 19:47 wrapper_checkpoint.txt
[2025-12-05 19:47:26] -rw------- 1 boinc boinc      4938 Dec  5 19:47 pilotlog.txt
[2025-12-05 19:47:26] -rw------- 1 boinc boinc   4076034 Dec  5 19:47 log.47533967._003499.job.log.1
[2025-12-05 19:47:26] -rw------- 1 boinc boinc       353 Dec  5 19:47 output.list
[2025-12-05 19:47:26] -rw-r--r-- 1 boinc boinc       620 Dec  5 19:47 runtime_log
[2025-12-05 19:47:26] -rw------- 1 boinc boinc   5263360 Dec  5 19:47 result.tar.gz
[2025-12-05 19:47:26] -rw-r--r-- 1 boinc boinc      8918 Dec  5 19:47 runtime_log.err
[2025-12-05 19:47:26] -rw------- 1 boinc boinc       669 Dec  5 19:47 BadMDm1udg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmeIJKDmYSfvnn.diag
[2025-12-05 19:47:26] -rw-r--r-- 1 boinc boinc     21257 Dec  5 19:47 stderr.txt
[2025-12-05 19:47:26] HITS file was successfully produced:
[2025-12-05 19:47:26] -rw------- 1 boinc boinc 905065938 Dec  5 19:46 shared/HITS.pool.root.1
[2025-12-05 19:47:26]  *** Contents of shared directory: ***
[2025-12-05 19:47:26] total 1287868
[2025-12-05 19:47:26] -rw-r--r-- 2 boinc boinc 407826127 Dec  5 11:43 ATLAS.root_0
[2025-12-05 19:47:26] -rw-r--r-- 2 boinc boinc    590097 Dec  5 11:43 input.tar.gz
[2025-12-05 19:47:26] -rw-r--r-- 2 boinc boinc     15847 Dec  5 11:43 start_atlas.sh
[2025-12-05 19:47:26] -rw------- 1 boinc boinc 905065938 Dec  5 19:46 HITS.pool.root.1
[2025-12-05 19:47:26] -rw------- 1 boinc boinc   5263360 Dec  5 19:47 result.tar.gz
19:47:27 (1308501): run_atlas exited; CPU time 85659.940331
19:47:27 (1308501): called boinc_finish(0)

</stderr_txt>
]]>

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